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SMTL ID : 4zn7.1

Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in complex with Diethylstilbestrol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

hetero-2-2-mer

Ligands

2 x DES: DIETHYLSTILBESTROL(Non-covalent)

DES.1:	15 residues within 4Å: Chain A: M.43, L.46, A.50, E.53, L.84, L.87, L.91, R.94, F.104, M.121, G.221, H.224, L.225, M.228, L.240 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.46, A:A.50, A:L.84, A:L.87, A:L.91, A:F.104, A:L.240 Hydrogen bonds: A:E.53, A:R.94, A:H.224, A:H.224 Water bridges: A:R.94 pi-Stacking: A:F.104
DES.2:	13 residues within 4Å: Chain B: M.43, L.46, A.50, E.53, L.84, L.87, R.94, F.104, M.121, G.221, H.224, L.225, M.228 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.46, B:A.50, B:A.50, B:L.84, B:L.87, B:F.104, B:L.225, B:L.225 Hydrogen bonds: B:E.53, B:R.94, B:H.224 Water bridges: B:R.94 pi-Stacking: B:F.104

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Nwachukwu, J.C. et al., Predictive features of ligand-specific signaling through the estrogen receptor. Mol.Syst.Biol. (2016)

Release Date

2016-05-04

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Estrogen receptor

Nuclear receptor coactivator 2

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