SMTL ID : 4tz2.1

Fragment-Based Screening of the Bromodomain of ATAD2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.9, R.12, R.16 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.16, A:R.16 Salt bridges: A:R.9, A:R.12, A:R.16

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.2: 5 residues within 4Å: Chain A: E.10, E.114, L.115, D.116, F.119 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.114, A:D.116

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 1 residues within 4Å: Chain A: R.99 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: D.88, R.89 Ligand excluded by PLIP

1 x 39R: 3-(5-phenyl-4H-1,2,4-triazol-3-yl)aniline(Non-covalent)

39R.5: 11 residues within 4Å: Chain A: V.30, F.31, K.33, V.35, Y.43, M.51, I.78, N.81, A.82, N.86, I.96 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.30, A:V.35, A:I.96 Hydrogen bonds: A:Y.43, A:M.51, A:A.82, A:N.86 Water bridges: A:N.81 pi-Stacking: A:F.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harner, M.J. et al., Fragment-Based Screening of the Bromodomain of ATAD2. J.Med.Chem. (2014)

Release Date

2014-10-29

Peptides

ATPase family AAA domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATPase family AAA domain-containing protein 2

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