SMTL ID : 6epr.1

The ATAD2 bromodomain in complex with compound UZH-DS15

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x BQE: (~{N}~{Z},2~{R})-~{N}-[5-(5-azanylpyridin-3-yl)-4-ethanoyl-3~{H}-1,3-thiazol-2-ylidene]-1-[2-[4,4-bis(fluoranyl)cyclohexyl]ethyl]piperazine-2-carboxamide(Non-covalent)

BQE.1: 14 residues within 4Å: Chain A: V.30, K.33, V.35, V.40, Y.43, A.82, Y.85, N.86, D.90, G.92, D.93, L.95, I.96, R.99 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.30, A:V.35, A:Y.43, A:L.95 Hydrogen bonds: A:V.30, A:N.86, A:N.86 Salt bridges: A:D.90, A:D.93

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.9, R.12, R.16 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.9, A:R.12, A:R.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sledz, P., Hitting a moving target: simulation and crystallography study of ATAD2 bromodomain blockers. To Be Published

Release Date

2018-10-31

Peptides

ATPase family AAA domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATPase family AAA domain-containing protein 2

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