6g8i.1 | SWISS-MODEL Template Library

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SMTL ID : 6g8i.1

14-3-3sigma in complex with a R124beta3R mutated YAP pS127 phosphopeptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

hetero-2-2-mer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1:	6 residues within 4Å: Chain A: M.6, K.14, F.30 Chain C: E.88, Y.89, K.92 Ligand excluded by PLIP
CL.5:	6 residues within 4Å: Chain A: E.88, Y.89, K.92 Chain C: M.6, K.14, F.30 Ligand excluded by PLIP

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2:	2 residues within 4Å: Chain A: E.166, M.167 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.166, H₂O.3, H₂O.9
MG.6:	2 residues within 4Å: Chain C: E.166, M.167 3 PLIP interactions: 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.166, H₂O.17, H₂O.24

4 x NA: SODIUM ION(Non-functional Binders)

NA.3:	4 residues within 4Å: Chain A: K.82, G.83, E.85 Chain C: Q.13 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:Q.13 Water bridges: C:S.10
NA.4:	1 residues within 4Å: Chain A: E.7 5 PLIP interactions: 5 interactions with chain A Water bridges: A:E.7, A:E.7, A:E.7, A:S.10, A:S.10
NA.7:	4 residues within 4Å: Chain A: Q.13 Chain C: K.82, G.83, E.85 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.13 Water bridges: A:S.10
NA.8:	1 residues within 4Å: Chain C: E.7 3 PLIP interactions: 3 interactions with chain C Water bridges: C:E.7, C:E.7, C:S.10

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Andrei, S.A. et al., A study on the effect of synthetic alpha-to-beta3-amino acid mutations on the binding of phosphopeptides to 14-3-3 proteins. Chem.Commun.(Camb.) (2019)

Release Date

2019-04-17

Peptides

14-3-3 protein sigma: AC
ALA-HIS-SEP-SER-PRO-ALA-SER-LEU-GLN: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
P

D
P

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

14-3-3 protein sigma

Toggle Identical (AC)

ALA-HIS-SEP-SER-PRO-ALA-SER-LEU-GLN

Toggle Identical (BD)

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