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SMTL ID : 8bwh.1

Small molecule stabilizer for 14-3-3/ChREBP (Cmd 42)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-2-2-mer

Ligands

6 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.1:	4 residues within 4Å: Chain A: E.194, S.197, L.198, T.201 No protein-ligand interaction detected (PLIP)
MG.2:	0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)
MG.3:	3 residues within 4Å: Chain A: E.91, E.94, T.95 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.94
MG.5:	4 residues within 4Å: Chain C: E.194, S.197, L.198, T.201 No protein-ligand interaction detected (PLIP)
MG.6:	0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)
MG.7:	3 residues within 4Å: Chain C: E.91, E.94, T.95 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:E.94

2 x XSL: [2-[2-[[2,2-bis(fluoranyl)-2-(2-fluorophenyl)ethyl]amino]-2-oxidanylidene-ethoxy]phenyl]phosphonic acid

XSL.4:

12 residues within 4Å:

Chain A: K.54, R.61, R.134, Y.135, L.179, N.180, I.224, L.227
Chain B: I.4, N.8, W.11, R.12

16 PLIP interactions:

5 interactions with chain B, 11 interactions with chain A

Hydrophobic interactions: B:I.4, B:W.11, A:K.54, A:I.224, A:L.227
Hydrogen bonds: B:R.12, B:R.12, A:R.61, A:R.61, A:R.134, A:R.134, A:Y.135
Water bridges: B:N.8, A:N.180
pi-Cation interactions: A:R.61
Halogen bonds: A:N.180

XSL.8:

12 residues within 4Å:

Chain C: K.54, R.61, R.134, Y.135, L.179, N.180, I.224, L.227
Chain D: I.4, N.8, W.11, R.12

16 PLIP interactions:

11 interactions with chain C, 5 interactions with chain D

Hydrophobic interactions: C:K.54, C:I.224, C:L.227, D:I.4, D:W.11
Hydrogen bonds: C:R.61, C:R.61, C:R.134, C:R.134, C:Y.135, C:Y.135, D:R.12, D:R.12
pi-Cation interactions: C:R.61
Halogen bonds: C:N.180
Water bridges: D:N.8

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Katz, L.S. et al., Molecular glues of the regulatory ChREBP/14-3-3 complex protect beta cells from glucolipotoxicity. Biorxiv (2024)

Release Date

2024-05-01

Peptides

14-3-3 protein sigma: AC
Carbohydrate-responsive element-binding protein: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

14-3-3 protein sigma

Toggle Identical (AC)

Carbohydrate-responsive element-binding protein

Toggle Identical (BD)

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