SMTL ID : 6yp3.1

14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-028

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-2-2-mer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: E.88, Y.89, K.92 Chain C: K.14 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: K.14 Chain C: E.88, Y.89, K.92 Ligand excluded by PLIP

2 x P5Q: 1-(4-methylphenyl)-1,2,4-triazole(Covalent)

P5Q.2: 5 residues within 4Å: Chain A: K.127, P.172, G.176, I.224 Chain B: I.8 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:K.127, A:I.224, B:I.8, B:I.8 Water bridges: A:D.220, A:D.220 P5Q.4: 5 residues within 4Å: Chain C: K.127, P.172, G.176, I.224 Chain D: I.8 4 PLIP interactions: 2 interactions with chain C, 2 interactions with chain D Hydrophobic interactions: C:K.127, C:I.224, D:I.8, D:I.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wolter, M. et al., Fragment-Based Stabilizers of Protein-Protein Interactions through Imine-Based Tethering. Angew.Chem.Int.Ed.Engl. (2020)

Release Date

2020-09-23

Peptides

14-3-3 protein sigma: AC
p65pS45: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
P

D
P

14-3-3 protein sigma

p65pS45

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