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SMTL ID : 7fig.1

luteinizing hormone/choriogonadotropin receptor(S277I)-chorionic gonadotropin-Gs complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-mer

Ligands

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1:	2 residues within 4Å: Chain E: S.137, N.164 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:S.137, E:N.164
NAG.2:	4 residues within 4Å: Chain E: N.157, Q.160, H.182, N.185 3 PLIP interactions: 3 interactions with chain E Hydrophobic interactions: E:H.182 Hydrogen bonds: E:N.157, E:Q.160
NAG.3:	6 residues within 4Å: Chain F: N.76 Chain G: V.82, F.84, A.103, R.114, T.117 2 PLIP interactions: 1 interactions with chain F, 1 interactions with chain G Hydrogen bonds: F:N.76 Hydrophobic interactions: G:A.103
NAG.4:	4 residues within 4Å: Chain F: A.47, P.48, L.50, N.102 3 PLIP interactions: 3 interactions with chain F Hydrophobic interactions: F:A.47 Hydrogen bonds: F:P.48, F:N.102
NAG.5:	1 residues within 4Å: Chain G: N.33 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:N.33

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Duan, J. et al., Structures of full-length glycoprotein hormone receptor signalling complexes. Nature (2021)

Release Date

2021-09-29

Peptides

Engineered guanine nucleotide-binding protein G(s) subunit alpha: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Camelid antibody VHH fragment Nb35: D
Lutropin-choriogonadotropic hormone receptor: E
Glycoprotein hormones alpha chain: F
Choriogonadotropin subunit beta 3: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

D
N

E
R

F
X

G
Y

Membrane

We predict this structure to be a membrane protein.
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Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Engineered guanine nucleotide-binding protein G(s) subunit alpha

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Camelid antibody VHH fragment Nb35

Lutropin-choriogonadotropic hormone receptor

Glycoprotein hormones alpha chain

Choriogonadotropin subunit beta 3

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Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog

Background

Transparent

Resolution

Low
Medium
High
Extreme

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