SMTL ID : 8irs.1

Dopamine Receptor D2R-Gi-Rotigotine complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x R5F: Rotigotine(Non-covalent)

R5F.1: 22 residues within 4Å: Chain E: V.236, L.239, V.256, D.259, V.260, C.263, T.264, I.267, I.328, I.329, V.335, S.338, S.339, S.342, W.531, F.534, F.535, H.538, Y.553, T.557, G.560, Y.561 13 PLIP interactions: 13 interactions with chain E Hydrophobic interactions: E:V.260, E:V.260, E:I.328, E:I.329, E:W.531, E:F.534, E:F.535, E:F.535, E:T.557, E:Y.561, E:Y.561 Hydrogen bonds: E:S.338 Salt bridges: E:D.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, P. et al., Structural genomics of the human dopamine receptor system. Cell Res. (2023)

Release Date

2023-06-07

Peptides

Guanine nucleotide-binding protein G(i) subunit alpha-1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
ScFv16: C
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: D
Soluble cytochrome b562,D(2) dopamine receptor: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
E

D
G

E
R

Membrane

We predict this structure to be a membrane protein.
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Guanine nucleotide-binding protein G(i) subunit alpha-1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

ScFv16

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Soluble cytochrome b562,D(2) dopamine receptor

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