SMTL ID : 8ywf.1

Cryo-EM structure of GLP1 complex bound with Retatrutide

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-mer

Ligands

1 x 01: 20-[[(2~{S})-1-oxidanyl-1,5-bis(oxidanylidene)-5-[2-[2-(2-oxidanylideneethoxy)ethoxy]ethylamino]pentan-2-yl]amino]-20-oxidanylidene-icosanoic acid

01.1: 7 residues within 4Å: Chain E: Y.10, L.14, K.17 Chain F: E.115, K.179, Y.182, S.183 3 PLIP interactions: 2 interactions with chain F, 1 interactions with chain E Hydrogen bonds: F:K.179, E:K.17 Salt bridges: F:K.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, L. et al., Cryo-EM structure of GLP1 complex bound with Retatrutide. To Be Published

Release Date

2025-04-16

Peptides

Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(s) subunit alpha isoforms short: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
NB35: D
Retatrutide: E
Glucagon-like peptide 1 receptor: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

D
N

E
P

F
R

Membrane

We predict this structure to be a membrane protein.
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Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(s) subunit alpha isoforms short

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

NB35

Retatrutide

Glucagon-like peptide 1 receptor

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