SMTL ID : 1cvw.1

Crystal structure of active site-inhibited human coagulation factor VIIA (DES-GLA)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

hetero-oligomer

Ligands

1 x 0GE: N-{[5-(DIMETHYLAMINO)NAPHTHALEN-1-YL]SULFONYL}-L-ALPHA-GLUTAMYL-N-[(2S,3S)-6-CARBAMIMIDAMIDO-1-CHLORO-2-HYDROXYHEXAN-3-YL]GLYCINAMIDE(Covalent)

0GE.1: 17 residues within 4Å: Chain B: H.41, T.87, G.166, P.169, D.186, S.187, C.188, K.189, G.190, S.192, S.211, W.212, G.213, Q.214, G.215, C.216, G.223 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:P.169, B:Q.214 Hydrogen bonds: B:S.187, B:S.187, B:G.190, B:S.192, B:S.211, B:G.213, B:G.213, B:G.215 Water bridges: B:D.186, B:W.212 Salt bridges: B:D.186, B:K.189

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain B: E.58, D.60, E.63, E.68 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.58, B:D.60, B:E.63, B:E.68, H2O.70, H2O.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kemball-Cook, G. et al., Crystal structure of active site-inhibited human coagulation factor VIIa (des-Gla). J.Struct.Biol. (1999)

Release Date

1999-08-31

Peptides

COAGULATION FACTOR VIIA (LIGHT CHAIN) (DES-GLA): A
COAGULATION FACTOR VIIA (HEAVY CHAIN) (DES-GLA): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

COAGULATION FACTOR VIIA (LIGHT CHAIN) (DES-GLA)

COAGULATION FACTOR VIIA (HEAVY CHAIN) (DES-GLA)

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