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SMTL ID : 1p2i.1

Structural consequences of accommodation of four non-cognate amino-acid residues in the S1 pocket of bovine trypsin and chymotrypsin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1:

4 residues within 4Å:

Chain A: E.52, N.54, V.57, E.62

5 PLIP interactions:

4 interactions with chain A, 1 Ligand-Water interactions

Metal complexes: A:E.52, A:N.54, A:V.57, A:E.62, H₂O.2

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2:	4 residues within 4Å: Chain B: F.4, E.7, K.41, R.42 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:R.42 Water bridges: B:E.7, B:E.7, B:E.7, B:E.7, B:N.43 Salt bridges: B:R.42
SO4.3:	4 residues within 4Å: Chain B: R.20, Y.35, G.37, A.40 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:Y.35 Water bridges: B:R.20, B:R.20, B:Y.35, B:A.40 Salt bridges: B:R.20

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Helland, R. et al., Structural consequences of accommodation of four non-cognate amino acid residues in the S1 pocket of bovine trypsin and chymotrypsin. J.Mol.Biol. (2003)

Release Date

2004-04-20

Peptides

Trypsinogen, cationic: A
Pancreatic trypsin inhibitor: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
I

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Trypsinogen, cationic

Pancreatic trypsin inhibitor

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Cartoon
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Background

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