SMTL ID : 2axt.1

Crystal Structure of Photosystem II from Thermosynechococcus elongatus

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.00 Å
Oligo State
hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
Ligands
2 x FE2: FE (II) ION(Non-covalent)
70 x CLA: CHLOROPHYLL A(Non-covalent)
4 x PHO: PHEOPHYTIN A(Non-covalent)
4 x PQ9: 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE(Non-covalent)
2 x OEC: OXYGEN EVOLVING SYSTEM(Covalent)
22 x BCR: BETA-CAROTENE(Non-covalent)
2 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
6 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
6 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
12 x MGE: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE(Non-covalent)
34 x UNK: UNKNOWN(Non-covalent)(Covalent)(Non-functional Binders)
8 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
2 x BCT: BICARBONATE ION(Non-functional Binders)
4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
2 x CA: CALCIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Loll, B. et al., Towards complete cofactor arrangement in the 3.0 A resolution structure of photosystem II. NATURE (2005)
Release Date
2005-12-27
Peptides
Photosystem Q(B) protein: AS
CP47 protein: BT
photosystem II CP43 protein: CU
photosystem II reaction center D2 protein: DV
Cytochrome b559 alpha subunit: EW
Cytochrome b559 beta subunit: FX
Photosystem II reaction center H protein: GY
Photosystem II reaction center I protein: HZ
Photosystem II reaction center J protein: I0
Photosystem II reaction center protein K: J1
Photosystem II reaction center L protein: K2
Photosystem II reaction center M protein: L3
Photosystem II manganese-stabilizing polypeptide: M4
Photosystem II reaction center T protein: N5
Photosystem II 12 kDa extrinsic protein: O6
Cytochrome c-550: P7
Unassigned subunits: Q8
Photosystem II reaction center Z protein: R9
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
S
a
B
B
T
b
C
C
U
c
D
D
V
d
E
E
W
e
F
F
X
f
G
H
Y
h
H
I
Z
i
I
J
0
j
J
K
1
k
K
L
2
l
L
M
3
m
M
O
4
o
N
T
5
t
O
U
6
u
P
V
7
v
Q
X
8
x
R
Z
9
z
Membrane
We predict this structure to be a membrane protein.

Photosystem Q(B) protein

Toggle Identical (AS)

CP47 protein

Toggle Identical (BT)

photosystem II CP43 protein

Toggle Identical (CU)

photosystem II reaction center D2 protein

Toggle Identical (DV)

Cytochrome b559 alpha subunit

Toggle Identical (EW)

Cytochrome b559 beta subunit

Toggle Identical (FX)

Photosystem II reaction center H protein

Toggle Identical (GY)

Photosystem II reaction center I protein

Toggle Identical (HZ)

Photosystem II reaction center J protein

Toggle Identical (I0)

Photosystem II reaction center protein K

Toggle Identical (J1)

Photosystem II reaction center L protein

Toggle Identical (K2)

Photosystem II reaction center M protein

Toggle Identical (L3)

Photosystem II manganese-stabilizing polypeptide

Toggle Identical (M4)

Photosystem II reaction center T protein

Toggle Identical (N5)

Photosystem II 12 kDa extrinsic protein

Toggle Identical (O6)

Cytochrome c-550

Toggle Identical (P7)

Unassigned subunits

Toggle Identical (Q8)

Photosystem II reaction center Z protein

Toggle Identical (R9)

Related Entries With Identical Sequence

1izl.1 | 1mz4.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1  more...