- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 2 x FE2: FE (II) ION(Non-covalent)
- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.2: 28 residues within 4Å:- Chain A: F.119, Y.147, P.150, S.153, A.154, V.157, F.182, M.183, I.184, F.186, Q.187, L.193, H.198, G.201, V.202, V.205, V.283, T.286, I.290
- Chain D: L.182, L.183, L.205
- Chain N: F.17
- Ligands: CLA.3, CLA.4, PHO.5, CLA.72, MGE.78
14 PLIP interactions:10 interactions with chain A, 3 interactions with chain D, 1 interactions with chain N,- Hydrophobic interactions: A:F.119, A:F.119, A:A.154, A:F.186, A:Q.187, A:L.193, A:V.202, A:V.205, D:L.182, D:L.183, D:L.205, N:F.17
- Hydrogen bonds: A:S.153
- Metal complexes: A:H.198
CLA.3: 23 residues within 4Å:- Chain A: T.45, F.48, V.49, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain D: M.198, V.201, A.202, G.206, L.209
- Chain K: L.30
- Ligands: CLA.2, PHO.5, UNK.35, CLA.72, MGE.78, MGE.84
8 PLIP interactions:6 interactions with chain A, 2 interactions with chain D,- Hydrophobic interactions: A:F.48, A:V.49, A:V.157, A:F.158, A:T.179, A:F.182, D:V.201, D:L.209
CLA.4: 19 residues within 4Å:- Chain A: Q.199, V.202, A.203, F.206, G.207, L.210, W.278
- Chain D: V.156, F.157, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.2, PHO.6, DGD.70, CLA.72, MGE.76
10 PLIP interactions:4 interactions with chain A, 6 interactions with chain D,- Hydrophobic interactions: A:V.202, A:L.210, A:W.278, D:V.156, D:F.157, D:F.157, D:I.178, D:F.181, D:L.182
- Hydrogen bonds: A:Q.199
CLA.7: 20 residues within 4Å:- Chain A: V.35, I.36, P.39, T.40, F.93, P.95, I.96, W.97, L.114, F.117, H.118, L.121
- Chain H: V.8, Y.9, V.12, T.13, F.15
- Ligands: BCR.10, CLA.56, MGE.82
16 PLIP interactions:7 interactions with chain H, 9 interactions with chain A,- Hydrophobic interactions: H:V.8, H:Y.9, H:Y.9, H:V.12, H:F.15, H:F.15, A:P.39, A:F.93, A:I.96, A:W.97, A:L.114, A:L.121
- Hydrogen bonds: H:Y.9, A:I.96
- Salt bridges: A:H.118
- Metal complexes: A:H.118
CLA.15: 5 residues within 4Å:- Chain B: W.185, F.190
- Chain G: F.41
- Ligands: CLA.16, BCR.80
3 PLIP interactions:3 interactions with chain B,- Hydrophobic interactions: B:W.185, B:F.190, B:F.190
CLA.16: 25 residues within 4Å:- Chain B: E.184, G.189, F.190, P.192, G.197, A.200, H.201, A.204, A.205, V.208, F.247, F.250, V.251
- Chain D: L.158, I.159
- Chain G: F.38, F.41, I.45, L.46, Y.49
- Ligands: CLA.15, CLA.17, CLA.19, CLA.22, DGD.81
18 PLIP interactions:11 interactions with chain B, 2 interactions with chain D, 5 interactions with chain G,- Hydrophobic interactions: B:A.200, B:H.201, B:A.205, B:V.208, B:V.208, B:F.247, B:F.247, B:F.250, B:F.250, D:L.158, D:I.159, G:F.38, G:F.41, G:I.45, G:L.46, G:L.46
- pi-Stacking: B:F.190
- Metal complexes: B:H.201
CLA.17: 25 residues within 4Å:- Chain B: R.68, L.69, A.146, L.149, C.150, F.153, L.158, V.198, H.201, H.202, F.247, A.248, V.252, T.262
- Chain G: M.35, F.38, L.39, L.42
- Ligands: CLA.16, CLA.18, CLA.19, CLA.20, CLA.22, CLA.24, BCR.80
16 PLIP interactions:4 interactions with chain G, 12 interactions with chain B,- Hydrophobic interactions: G:F.38, G:F.38, G:L.39, G:L.42, B:L.149, B:F.153, B:F.153, B:F.153, B:F.247, B:F.247, B:A.248, B:T.262
- Hydrogen bonds: B:R.68
- Salt bridges: B:R.68
- pi-Stacking: B:F.153
- Metal complexes: B:H.202
CLA.18: 25 residues within 4Å:- Chain B: W.33, F.61, F.65, R.68, L.145, L.148, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.17, CLA.19, CLA.21, CLA.24, CLA.25, CLA.26, CLA.27, CLA.29, CLA.30
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:W.33, B:F.61, B:F.65, B:L.148, B:L.149, B:V.245, B:A.248, B:A.249, B:V.252, B:F.458, B:F.458, B:F.458, B:F.462
- Salt bridges: B:R.68
- pi-Stacking: B:F.451
- Metal complexes: B:H.455
CLA.19: 26 residues within 4Å:- Chain B: T.27, V.30, A.31, W.33, A.34, V.62, F.65, M.66, R.68, L.69, V.96, H.100, L.103, L.143, G.147, C.150, A.205
- Ligands: CLA.16, CLA.17, CLA.18, CLA.20, CLA.23, CLA.24, CLA.26, CLA.29, BCR.33
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:T.27, B:V.30, B:A.31, B:W.33, B:A.34, B:L.69, B:V.96, B:L.103, B:L.143
- Salt bridges: B:R.68
- Metal complexes: B:H.100
CLA.20: 19 residues within 4Å:- Chain B: L.69, G.70, V.71, W.91, V.96, A.99, H.100, V.102, L.103, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.17, CLA.19, BCR.33
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:L.69, B:V.71, B:W.91, B:W.91, B:W.91, B:W.91, B:V.96, B:A.99, B:V.102, B:F.153, B:F.156, B:F.162, B:F.162
- Metal complexes: B:H.157
CLA.21: 26 residues within 4Å:- Chain B: W.33, M.37, Y.40, Q.58, G.59, F.61, L.324, F.325, T.327, G.328, P.329, W.450, F.451, A.454, H.455
- Chain D: F.196, M.281
- Chain K: L.27, F.31
- Chain L: F.14
- Ligands: CLA.18, CLA.27, BCR.31, BCR.32, MGE.34, BCR.176
17 PLIP interactions:13 interactions with chain B, 1 interactions with chain L, 1 interactions with chain D, 2 interactions with chain K,- Hydrophobic interactions: B:Y.40, B:F.61, B:F.61, B:F.61, B:F.61, B:F.325, B:T.327, B:W.450, B:W.450, B:W.450, B:A.454, L:F.14, D:F.196, K:F.31, K:F.31
- pi-Stacking: B:F.61, B:W.450
CLA.22: 25 residues within 4Å:- Chain B: T.236, S.239, A.243, F.246, F.463, H.466, I.467, G.470, L.474
- Chain D: L.89, L.116, F.120, I.123, M.126, L.127, F.130
- Chain G: L.43, L.46
- Ligands: CLA.16, CLA.17, CLA.23, CLA.24, UNK.42, UNK.43, CLA.73
16 PLIP interactions:6 interactions with chain B, 8 interactions with chain D, 2 interactions with chain G,- Hydrophobic interactions: B:A.243, B:F.246, B:F.463, B:I.467, B:L.474, D:L.89, D:L.116, D:F.120, D:I.123, D:M.126, D:L.127, D:L.127, D:F.130, G:L.43, G:L.46
- Metal complexes: B:H.466
CLA.23: 24 residues within 4Å:- Chain B: F.139, L.143, V.208, A.212, F.215, H.216, V.219, P.221, P.222, L.229, M.231
- Chain D: F.120
- Chain G: T.27, T.28, L.30, M.31, F.34, M.35, L.39
- Ligands: CLA.19, CLA.22, CLA.24, UNK.43, BCR.80
14 PLIP interactions:5 interactions with chain G, 8 interactions with chain B, 1 interactions with chain D,- Hydrophobic interactions: G:T.27, G:L.30, G:M.31, G:F.34, G:L.39, B:F.139, B:L.143, B:V.208, B:A.212, B:F.215, B:L.229, D:F.120
- Salt bridges: B:H.216
- Metal complexes: B:H.216
CLA.24: 20 residues within 4Å:- Chain B: H.23, L.135, P.136, F.139, H.142, L.143, A.146, L.229, M.231, V.237, S.240, S.241
- Ligands: CLA.17, CLA.18, CLA.19, CLA.22, CLA.23, CLA.26, CLA.29, BCR.80
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.135, B:P.136, B:A.146, B:L.229, B:V.237, B:V.237
- Hydrogen bonds: B:H.142
CLA.25: 22 residues within 4Å:- Chain B: W.5, Y.6, R.7, V.8, H.9, L.238, I.242, L.461, F.462, F.464, G.465, W.468, H.469, R.472, F.479
- Chain L: F.21
- Ligands: CLA.18, CLA.26, CLA.27, CLA.28, MGE.77, MGE.84
17 PLIP interactions:16 interactions with chain B, 1 interactions with chain L,- Hydrophobic interactions: B:W.5, B:W.5, B:H.9, B:L.238, B:L.238, B:I.242, B:I.242, B:F.462, B:F.462, B:F.464, B:W.468, L:F.21
- Hydrogen bonds: B:H.9
- Salt bridges: B:H.9, B:R.472
- pi-Stacking: B:W.468
- Metal complexes: B:H.469
CLA.26: 21 residues within 4Å:- Chain B: H.9, L.12, L.19, A.22, H.23, H.26, T.27, V.30, I.234, V.237, L.238, S.241, V.245, A.248
- Ligands: CLA.18, CLA.19, CLA.24, CLA.25, CLA.27, CLA.28, CLA.29
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:L.12, B:L.12, B:L.19, B:A.22, B:H.26, B:V.30, B:I.234, B:V.237, B:L.238, B:L.238, B:V.245, B:A.248
- Hydrogen bonds: B:S.241
- pi-Stacking: B:H.26
- Metal complexes: B:H.23
CLA.27: 16 residues within 4Å:- Chain B: H.9, H.26, L.29, V.30, W.33, L.461, F.462
- Chain L: F.14
- Ligands: CLA.18, CLA.21, CLA.25, CLA.26, CLA.28, BCR.31, BCR.32, MGE.77
9 PLIP interactions:8 interactions with chain B, 1 interactions with chain L,- Hydrophobic interactions: B:L.29, B:V.30, B:V.30, B:W.33, B:L.461, B:F.462, L:F.14
- Salt bridges: B:H.9
- Metal complexes: B:H.26
CLA.28: 21 residues within 4Å:- Chain 3: S.36
- Chain B: V.8, H.9, V.11, L.12, A.22, M.25, L.29, W.115
- Chain K: R.7, V.10
- Chain L: F.21, L.25
- Ligands: CLA.25, CLA.26, CLA.27, BCR.31, MGE.84, UNK.125, UNK.126, SQD.177
7 PLIP interactions:1 interactions with chain L, 1 interactions with chain K, 5 interactions with chain B,- Hydrophobic interactions: L:L.25, B:L.12, B:M.25, B:L.29, B:W.115
- Salt bridges: K:R.7
- Metal complexes: B:H.9
CLA.29: 16 residues within 4Å:- Chain B: I.20, H.23, L.133, M.138, I.141, H.142, L.145
- Chain G: L.11, L.14, N.15
- Ligands: CLA.18, CLA.19, CLA.24, CLA.26, CLA.30, BCR.33
7 PLIP interactions:3 interactions with chain G, 4 interactions with chain B,- Hydrophobic interactions: G:L.11, G:L.14, G:N.15, B:L.133, B:I.141, B:I.141, B:L.145
CLA.30: 13 residues within 4Å:- Chain B: I.20, L.24, A.110, W.113, H.114, L.120
- Chain G: T.5, L.7, G.8, L.11
- Ligands: CLA.18, CLA.29, BCR.33
8 PLIP interactions:2 interactions with chain G, 6 interactions with chain B,- Hydrophobic interactions: G:L.7, G:L.11, B:I.20, B:W.113, B:W.113, B:W.113, B:L.120
- Metal complexes: B:H.114
CLA.52: 22 residues within 4Å:- Chain C: L.95, L.168, G.171, A.172, L.175, L.185, W.223, I.224, V.233, H.237, I.240, A.278, M.281, M.282, I.285, V.296, Y.297
- Ligands: CLA.53, CLA.54, CLA.58, CLA.63, BCR.67
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:L.168, C:A.172, C:L.175, C:W.223, C:I.224, C:I.240, C:A.278, C:M.282, C:I.285, C:V.296
- Hydrogen bonds: C:Y.297
- Metal complexes: C:H.237
CLA.53: 23 residues within 4Å:- Chain C: W.63, H.91, W.97, G.171, L.174, L.175, K.178, L.279, M.282, G.283, A.286, V.290, Y.297, L.426, H.430, L.433, A.434, F.437
- Ligands: CLA.52, CLA.54, CLA.55, CLA.61, CLA.63
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:W.63, C:W.63, C:W.97, C:L.174, C:K.178, C:L.279, C:A.286, C:L.426, C:L.433, C:F.437
- Salt bridges: C:H.91
- Metal complexes: C:H.430
CLA.54: 17 residues within 4Å:- Chain C: I.60, V.61, A.64, T.68, L.88, H.91, I.92, L.95, V.114, H.118, L.279
- Ligands: UNK.38, CLA.52, CLA.53, CLA.58, CLA.61, CLA.63
9 PLIP interactions:9 interactions with chain C,- Hydrophobic interactions: C:I.60, C:V.61, C:A.64, C:H.91, C:L.95, C:V.114, C:L.279
- Salt bridges: C:H.91
- Metal complexes: C:H.118
CLA.55: 16 residues within 4Å:- Chain C: W.63, M.67, F.70, G.85, I.87, S.406, W.425, S.429, H.430
- Chain J: P.17, V.18, V.21
- Ligands: UNK.39, CLA.53, CLA.61, DGD.69
8 PLIP interactions:1 interactions with chain J, 7 interactions with chain C,- Hydrophobic interactions: J:V.21, C:W.63, C:F.70, C:I.87, C:W.425, C:W.425
- Hydrogen bonds: C:S.406
- pi-Stacking: C:W.425
CLA.56: 24 residues within 4Å:- Chain A: F.33, I.36, S.124, M.127, G.128, W.131
- Chain C: F.264, I.265, S.273, Y.274, G.277, A.278, L.438, H.441, L.442, A.445, R.449
- Chain H: V.12, V.16, F.23
- Ligands: CLA.7, CLA.57, CLA.58, BCR.67
14 PLIP interactions:7 interactions with chain C, 5 interactions with chain A, 2 interactions with chain H,- Hydrophobic interactions: C:Y.274, C:L.438, C:L.442, A:I.36, A:W.131, A:W.131, H:V.12, H:V.16
- Hydrogen bonds: C:S.273, C:Y.274
- Salt bridges: C:R.449
- Metal complexes: C:H.441
- pi-Stacking: A:W.131, A:W.131
CLA.57: 19 residues within 4Å:- Chain C: L.161, L.165, I.243, C.244, A.246, G.247, W.250, H.251, T.255, P.256, F.257, W.259, A.260, F.264
- Chain H: V.20, L.24
- Ligands: CLA.56, CLA.58, BCR.67
12 PLIP interactions:10 interactions with chain C, 2 interactions with chain H,- Hydrophobic interactions: C:L.161, C:L.165, C:L.165, C:I.243, C:W.250, C:W.259, C:A.260, H:V.20, H:L.24
- Hydrogen bonds: C:F.257
- pi-Stacking: C:W.250
- Metal complexes: C:H.251
CLA.58: 22 residues within 4Å:- Chain C: M.157, T.158, L.161, H.164, L.165, L.168, I.240, W.259, F.264, W.266, Y.271, Y.274, S.275, A.278, L.279, M.282
- Ligands: CLA.52, CLA.54, CLA.56, CLA.57, CLA.60, BCR.67
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:M.157, C:L.161, C:L.168, C:I.240, C:W.259, C:F.264, C:W.266, C:Y.271, C:Y.271, C:Y.274, C:Y.274, C:L.279
- Salt bridges: C:H.164
CLA.59: 20 residues within 4Å:- Chain C: W.36, A.37, N.39, A.40, E.269, L.272, L.276, F.436, F.437, G.440, W.443, H.444, R.447
- Chain J: L.24
- Ligands: LHG.11, SQD.12, CLA.60, CLA.61, CLA.62, DGD.70
12 PLIP interactions:11 interactions with chain C, 1 interactions with chain J,- Hydrophobic interactions: C:N.39, C:A.40, C:L.272, C:L.272, C:F.437, C:F.437, C:W.443, J:L.24
- Salt bridges: C:H.444, C:R.447
- pi-Stacking: C:W.443
- Metal complexes: C:H.444
CLA.60: 16 residues within 4Å:- Chain C: N.39, L.49, A.52, H.53, H.56, W.151, G.268, E.269, Y.271, L.272, S.275, L.279
- Ligands: CLA.58, CLA.59, CLA.61, CLA.62
8 PLIP interactions:8 interactions with chain C,- Hydrophobic interactions: C:N.39, C:L.49, C:A.52, C:H.56, C:W.151, C:Y.271
- Hydrogen bonds: C:S.275
- Metal complexes: C:H.53
CLA.61: 18 residues within 4Å:- Chain C: N.39, H.56, L.59, I.60, W.63, L.279, F.436, F.437
- Chain J: P.20, V.21, L.24
- Ligands: LHG.11, CLA.53, CLA.54, CLA.55, CLA.59, CLA.60, CLA.62
10 PLIP interactions:8 interactions with chain C, 2 interactions with chain J,- Hydrophobic interactions: C:L.59, C:I.60, C:W.63, C:L.279, C:F.436, C:F.437, J:P.20, J:V.21
- Hydrogen bonds: C:N.39
- Metal complexes: C:H.56
CLA.62: 32 residues within 4Å:- Chain C: D.27, W.35, G.38, N.39, R.41, L.42, L.45, K.48, A.52, A.55, L.59, A.123, G.126, F.127, V.130, A.133, I.134
- Chain J: F.23, A.27, F.28, W.30, Q.31
- Chain Q: X.30, X.31
- Chain R: M.19, V.20, V.23, P.24
- Ligands: CLA.59, CLA.60, CLA.61, BCR.65
17 PLIP interactions:11 interactions with chain C, 2 interactions with chain R, 4 interactions with chain J,- Hydrophobic interactions: C:W.35, C:L.42, C:L.42, C:K.48, C:A.52, C:A.55, C:L.59, C:F.127, C:V.130, C:I.134, R:M.19, R:V.23, J:F.23, J:F.28
- Hydrogen bonds: C:R.41
- pi-Stacking: J:W.30, J:W.30
CLA.63: 18 residues within 4Å:- Chain C: L.50, H.53, A.57, L.140, F.146, F.147, Y.149, I.160, F.163, H.164, V.167, L.168, G.171
- Ligands: CLA.52, CLA.53, CLA.54, CLA.64, BCR.66
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:L.50, C:H.53, C:L.140, C:Y.149, C:I.160, C:F.163, C:F.163, C:F.163, C:F.163
- Metal complexes: C:H.164
CLA.64: 12 residues within 4Å:- Chain C: L.50, V.54, V.124, L.125, G.128, Y.131, H.132, P.137, L.140, F.147
- Ligands: CLA.63, BCR.66
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:L.50, C:V.54, C:V.124, C:L.125, C:Y.131, C:L.140, C:F.147, C:F.147
- Salt bridges: C:H.132
- Metal complexes: C:H.132
CLA.72: 27 residues within 4Å:- Chain A: M.183, F.206
- Chain D: L.45, W.48, L.122, V.152, F.153, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.279, S.282, A.283, V.286
- Ligands: CLA.2, CLA.3, CLA.4, PHO.6, MGE.76
17 PLIP interactions:15 interactions with chain D, 2 interactions with chain A,- Hydrophobic interactions: D:L.45, D:W.48, D:L.122, D:V.152, D:F.153, D:F.181, D:L.182, D:F.185, D:Q.186, D:T.192, D:V.201, D:V.201, D:V.204, A:F.206, A:F.206
- pi-Stacking: D:W.191
- Metal complexes: D:H.197
CLA.73: 22 residues within 4Å:- Chain D: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, T.112, F.113, H.117, F.120
- Chain Q: X.63, X.64, X.67, X.71
- Ligands: CLA.22, UNK.41, BCR.75
11 PLIP interactions:11 interactions with chain D,- Hydrophobic interactions: D:L.36, D:P.39, D:L.43, D:L.43, D:W.93, D:W.93, D:F.120
- Hydrogen bonds: D:L.92
- Salt bridges: D:H.117
- pi-Stacking: D:F.113
- Metal complexes: D:H.117
CLA.93: 28 residues within 4Å:- Chain 5: F.17
- Chain S: F.119, Y.147, P.150, S.153, A.154, V.157, F.182, M.183, I.184, F.186, Q.187, L.193, H.198, G.201, V.202, V.205, V.283, T.286, I.290
- Chain V: L.182, L.183, L.205
- Ligands: CLA.94, CLA.95, PHO.96, CLA.161, MGE.168
13 PLIP interactions:9 interactions with chain S, 3 interactions with chain V, 1 interactions with chain 5,- Hydrophobic interactions: S:F.119, S:F.119, S:A.154, S:F.186, S:Q.187, S:L.193, S:V.202, S:V.205, V:L.182, V:L.183, V:L.205, 5:F.17
- Metal complexes: S:H.198
CLA.94: 24 residues within 4Å:- Chain 2: L.30
- Chain S: T.45, F.48, V.49, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain V: M.198, V.201, A.202, L.205, G.206, L.209
- Ligands: CLA.93, PHO.96, UNK.124, CLA.161, MGE.168, MGE.174
8 PLIP interactions:6 interactions with chain S, 2 interactions with chain V,- Hydrophobic interactions: S:F.48, S:V.49, S:V.157, S:F.158, S:T.179, S:F.182, V:V.201, V:L.209
CLA.95: 17 residues within 4Å:- Chain S: Q.199, V.202, A.203, G.207, L.210, W.278
- Chain V: F.157, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.93, PHO.97, DGD.159, CLA.161, MGE.166
9 PLIP interactions:5 interactions with chain V, 4 interactions with chain S,- Hydrophobic interactions: V:F.157, V:F.157, V:I.178, V:F.181, V:L.182, S:V.202, S:L.210, S:W.278
- Hydrogen bonds: S:Q.199
CLA.98: 20 residues within 4Å:- Chain S: V.35, I.36, P.39, T.40, F.93, P.95, I.96, W.97, L.114, F.117, H.118, L.121
- Chain Z: V.8, Y.9, V.12, T.13, F.15
- Ligands: BCR.101, CLA.145, MGE.172
15 PLIP interactions:9 interactions with chain S, 6 interactions with chain Z,- Hydrophobic interactions: S:P.39, S:F.93, S:I.96, S:W.97, S:L.114, S:L.121, Z:V.8, Z:Y.9, Z:Y.9, Z:V.12, Z:F.15, Z:F.15
- Hydrogen bonds: S:I.96
- Salt bridges: S:H.118
- Metal complexes: S:H.118
CLA.104: 5 residues within 4Å:- Chain T: W.185, F.190
- Chain Y: F.41
- Ligands: CLA.105, BCR.170
3 PLIP interactions:3 interactions with chain T,- Hydrophobic interactions: T:W.185, T:F.190, T:F.190
CLA.105: 25 residues within 4Å:- Chain T: E.184, G.189, F.190, P.192, G.197, A.200, H.201, A.204, A.205, V.208, F.247, F.250, V.251
- Chain V: L.158, I.159
- Chain Y: F.38, F.41, I.45, L.46, Y.49
- Ligands: CLA.104, CLA.106, CLA.108, CLA.111, DGD.171
19 PLIP interactions:11 interactions with chain T, 6 interactions with chain Y, 2 interactions with chain V,- Hydrophobic interactions: T:A.200, T:H.201, T:A.205, T:V.208, T:V.208, T:F.247, T:F.247, T:F.250, T:F.250, Y:F.38, Y:F.41, Y:I.45, Y:I.45, Y:L.46, Y:L.46, V:L.158, V:I.159
- pi-Stacking: T:F.190
- Metal complexes: T:H.201
CLA.106: 25 residues within 4Å:- Chain T: R.68, L.69, A.146, L.149, C.150, F.153, L.158, V.198, H.201, H.202, F.247, A.248, V.252, T.262
- Chain Y: M.35, F.38, L.39, L.42
- Ligands: CLA.105, CLA.107, CLA.108, CLA.109, CLA.111, CLA.113, BCR.170
16 PLIP interactions:4 interactions with chain Y, 12 interactions with chain T,- Hydrophobic interactions: Y:F.38, Y:F.38, Y:L.39, Y:L.42, T:L.149, T:F.153, T:F.153, T:F.153, T:F.247, T:F.247, T:A.248, T:T.262
- Hydrogen bonds: T:R.68
- Salt bridges: T:R.68
- pi-Stacking: T:F.153
- Metal complexes: T:H.202
CLA.107: 24 residues within 4Å:- Chain T: W.33, F.61, F.65, R.68, L.148, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.106, CLA.108, CLA.110, CLA.113, CLA.114, CLA.115, CLA.116, CLA.118, CLA.119
16 PLIP interactions:16 interactions with chain T,- Hydrophobic interactions: T:W.33, T:F.61, T:F.65, T:L.148, T:L.149, T:V.245, T:A.248, T:A.249, T:F.451, T:F.458, T:F.458, T:F.458, T:F.462
- Salt bridges: T:R.68
- pi-Stacking: T:F.451
- Metal complexes: T:H.455
CLA.108: 26 residues within 4Å:- Chain T: T.27, V.30, A.31, W.33, A.34, V.62, F.65, M.66, R.68, L.69, V.96, H.100, L.103, L.143, G.147, C.150, A.205
- Ligands: CLA.105, CLA.106, CLA.107, CLA.109, CLA.112, CLA.113, CLA.115, CLA.118, BCR.122
11 PLIP interactions:11 interactions with chain T,- Hydrophobic interactions: T:T.27, T:V.30, T:A.31, T:W.33, T:A.34, T:L.69, T:V.96, T:L.103, T:L.143
- Salt bridges: T:R.68
- Metal complexes: T:H.100
CLA.109: 19 residues within 4Å:- Chain T: L.69, G.70, V.71, W.91, V.96, A.99, H.100, V.102, L.103, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.106, CLA.108, BCR.122
14 PLIP interactions:14 interactions with chain T,- Hydrophobic interactions: T:L.69, T:V.71, T:W.91, T:W.91, T:W.91, T:W.91, T:V.96, T:A.99, T:V.102, T:F.153, T:F.156, T:F.162, T:F.162
- Metal complexes: T:H.157
CLA.110: 26 residues within 4Å:- Chain 2: L.27, F.31
- Chain 3: F.14
- Chain T: W.33, M.37, Y.40, Q.58, G.59, F.61, L.324, F.325, T.327, G.328, P.329, W.450, F.451, A.454, H.455
- Chain V: F.196, M.281
- Ligands: BCR.88, CLA.107, CLA.116, BCR.120, BCR.121, MGE.123
18 PLIP interactions:14 interactions with chain T, 1 interactions with chain V, 2 interactions with chain 2, 1 interactions with chain 3,- Hydrophobic interactions: T:Y.40, T:F.61, T:F.61, T:F.61, T:F.61, T:F.325, T:T.327, T:W.450, T:W.450, T:W.450, T:A.454, V:F.196, 2:F.31, 2:F.31, 3:F.14
- Hydrogen bonds: T:Y.40
- pi-Stacking: T:F.61, T:W.450
CLA.111: 25 residues within 4Å:- Chain T: T.236, S.239, A.243, F.246, F.463, H.466, I.467, G.470, L.474
- Chain V: L.116, F.120, I.123, M.126, L.127, F.130
- Chain Y: L.43, L.46
- Ligands: CLA.105, CLA.106, CLA.112, CLA.113, UNK.131, UNK.132, CLA.162, DGD.171
16 PLIP interactions:6 interactions with chain T, 8 interactions with chain V, 2 interactions with chain Y,- Hydrophobic interactions: T:A.243, T:F.246, T:F.463, T:I.467, T:L.474, V:L.116, V:F.120, V:F.120, V:I.123, V:M.126, V:L.127, V:L.127, V:F.130, Y:L.43, Y:L.46
- Metal complexes: T:H.466
CLA.112: 26 residues within 4Å:- Chain T: F.139, L.143, V.208, A.212, F.215, H.216, V.219, R.220, P.221, P.222, L.225, L.229, M.231
- Chain V: F.120
- Chain Y: T.27, T.28, L.30, M.31, F.34, M.35, L.39
- Ligands: CLA.108, CLA.111, CLA.113, UNK.132, BCR.170
15 PLIP interactions:6 interactions with chain Y, 8 interactions with chain T, 1 interactions with chain V,- Hydrophobic interactions: Y:T.27, Y:L.30, Y:M.31, Y:F.34, Y:L.39, T:F.139, T:L.143, T:V.208, T:A.212, T:F.215, T:L.229, V:F.120
- Hydrogen bonds: Y:T.27
- Salt bridges: T:H.216
- Metal complexes: T:H.216
CLA.113: 19 residues within 4Å:- Chain T: H.23, L.135, P.136, F.139, H.142, A.146, L.229, M.231, V.237, S.240, S.241
- Ligands: CLA.106, CLA.107, CLA.108, CLA.111, CLA.112, CLA.115, CLA.118, BCR.170
6 PLIP interactions:6 interactions with chain T,- Hydrophobic interactions: T:L.135, T:P.136, T:A.146, T:L.229, T:V.237, T:V.237
CLA.114: 22 residues within 4Å:- Chain 3: F.21
- Chain T: W.5, Y.6, R.7, V.8, H.9, L.238, I.242, L.461, F.462, F.464, G.465, W.468, H.469, R.472, F.479
- Ligands: CLA.107, CLA.115, CLA.116, CLA.117, MGE.167, MGE.174
17 PLIP interactions:16 interactions with chain T, 1 interactions with chain 3,- Hydrophobic interactions: T:W.5, T:W.5, T:H.9, T:L.238, T:L.238, T:I.242, T:I.242, T:F.462, T:F.462, T:F.464, T:W.468, 3:F.21
- Hydrogen bonds: T:H.9
- Salt bridges: T:H.9, T:R.472
- pi-Stacking: T:W.468
- Metal complexes: T:H.469
CLA.115: 21 residues within 4Å:- Chain T: H.9, L.12, L.19, A.22, H.23, H.26, T.27, V.30, I.234, V.237, L.238, S.241, V.245, A.248
- Ligands: CLA.107, CLA.108, CLA.113, CLA.114, CLA.116, CLA.117, CLA.118
16 PLIP interactions:16 interactions with chain T,- Hydrophobic interactions: T:L.12, T:L.12, T:L.19, T:A.22, T:H.26, T:V.30, T:I.234, T:V.237, T:L.238, T:L.238, T:V.245, T:A.248
- Hydrogen bonds: T:H.23, T:S.241
- pi-Stacking: T:H.26
- Metal complexes: T:H.23
CLA.116: 17 residues within 4Å:- Chain 3: F.14
- Chain T: H.9, H.26, L.29, V.30, W.33, F.458, L.461, F.462
- Ligands: CLA.107, CLA.110, CLA.114, CLA.115, CLA.117, BCR.120, BCR.121, MGE.167
11 PLIP interactions:10 interactions with chain T, 1 interactions with chain 3,- Hydrophobic interactions: T:L.29, T:V.30, T:V.30, T:W.33, T:W.33, T:F.458, T:L.461, T:F.462, 3:F.14
- Salt bridges: T:H.9
- Metal complexes: T:H.26
CLA.117: 21 residues within 4Å:- Chain 2: R.7, V.10
- Chain 3: F.21, L.25
- Chain L: S.36
- Chain T: V.8, H.9, V.11, L.12, A.22, M.25, L.29, W.115
- Ligands: UNK.36, UNK.37, SQD.85, CLA.114, CLA.115, CLA.116, BCR.120, MGE.174
7 PLIP interactions:5 interactions with chain T, 1 interactions with chain 3, 1 interactions with chain 2,- Hydrophobic interactions: T:L.12, T:M.25, T:L.29, T:W.115, 3:L.25
- Metal complexes: T:H.9
- Salt bridges: 2:R.7
CLA.118: 16 residues within 4Å:- Chain T: I.20, H.23, L.133, M.138, I.141, H.142, L.145
- Chain Y: L.11, L.14, N.15
- Ligands: CLA.107, CLA.108, CLA.113, CLA.115, CLA.119, BCR.122
7 PLIP interactions:4 interactions with chain T, 3 interactions with chain Y,- Hydrophobic interactions: T:L.133, T:I.141, T:L.145, Y:L.11, Y:L.14, Y:N.15
- Hydrogen bonds: T:H.23
CLA.119: 13 residues within 4Å:- Chain T: I.20, L.24, A.110, W.113, H.114, L.120
- Chain Y: T.5, L.7, G.8, L.11
- Ligands: CLA.107, CLA.118, BCR.122
8 PLIP interactions:6 interactions with chain T, 2 interactions with chain Y,- Hydrophobic interactions: T:I.20, T:W.113, T:W.113, T:W.113, T:L.120, Y:L.7, Y:L.11
- Metal complexes: T:H.114
CLA.141: 21 residues within 4Å:- Chain U: L.95, L.168, G.171, A.172, L.175, L.185, W.223, I.224, V.233, H.237, I.240, A.278, M.281, M.282, V.296, Y.297
- Ligands: CLA.142, CLA.143, CLA.147, CLA.152, BCR.156
10 PLIP interactions:10 interactions with chain U,- Hydrophobic interactions: U:L.168, U:A.172, U:L.175, U:W.223, U:I.224, U:I.240, U:A.278, U:M.282, U:V.296
- Metal complexes: U:H.237
CLA.142: 23 residues within 4Å:- Chain U: W.63, H.91, W.97, G.171, L.174, L.175, K.178, L.279, M.282, G.283, A.286, V.290, Y.297, L.426, H.430, L.433, A.434, F.437
- Ligands: CLA.141, CLA.143, CLA.144, CLA.150, CLA.152
12 PLIP interactions:12 interactions with chain U,- Hydrophobic interactions: U:W.63, U:W.63, U:W.97, U:L.174, U:K.178, U:L.279, U:A.286, U:L.426, U:F.437
- Hydrogen bonds: U:Y.297
- Salt bridges: U:H.91
- Metal complexes: U:H.430
CLA.143: 18 residues within 4Å:- Chain U: I.60, V.61, A.64, T.68, L.88, H.91, I.92, L.95, V.114, H.118, L.279, M.282
- Ligands: UNK.127, CLA.141, CLA.142, CLA.147, CLA.150, CLA.152
9 PLIP interactions:9 interactions with chain U,- Hydrophobic interactions: U:I.60, U:V.61, U:A.64, U:H.91, U:L.95, U:V.114, U:L.279
- Salt bridges: U:H.91
- Metal complexes: U:H.118
CLA.144: 16 residues within 4Å:- Chain 1: P.17, V.18, V.21
- Chain U: W.63, M.67, F.70, G.85, I.87, S.406, W.425, S.429, H.430
- Ligands: UNK.128, CLA.142, CLA.150, DGD.158
7 PLIP interactions:6 interactions with chain U, 1 interactions with chain 1,- Hydrophobic interactions: U:W.63, U:F.70, U:I.87, U:W.425, U:W.425, 1:V.21
- pi-Stacking: U:W.425
CLA.145: 24 residues within 4Å:- Chain S: F.33, I.36, S.124, M.127, G.128, W.131
- Chain U: F.264, I.265, S.273, Y.274, G.277, A.278, L.438, H.441, L.442, A.445, R.449
- Chain Z: V.12, V.16, F.23
- Ligands: CLA.98, CLA.146, CLA.147, BCR.156
13 PLIP interactions:6 interactions with chain U, 5 interactions with chain S, 2 interactions with chain Z,- Hydrophobic interactions: U:Y.274, U:L.438, U:L.442, S:I.36, S:W.131, S:W.131, Z:V.12, Z:V.16
- Hydrogen bonds: U:S.273
- Salt bridges: U:R.449
- Metal complexes: U:H.441
- pi-Stacking: S:W.131, S:W.131
CLA.146: 18 residues within 4Å:- Chain U: L.161, L.165, I.243, C.244, A.246, G.247, W.250, H.251, T.255, P.256, F.257, W.259, A.260, F.264
- Chain Z: L.24
- Ligands: CLA.145, CLA.147, BCR.156
11 PLIP interactions:10 interactions with chain U, 1 interactions with chain Z,- Hydrophobic interactions: U:L.161, U:L.165, U:L.165, U:I.243, U:W.250, U:W.259, U:A.260, Z:L.24
- Hydrogen bonds: U:F.257
- pi-Stacking: U:W.250
- Metal complexes: U:H.251
CLA.147: 22 residues within 4Å:- Chain U: M.157, T.158, L.161, H.164, L.165, L.168, I.240, W.259, F.264, W.266, Y.271, Y.274, S.275, A.278, L.279, M.282
- Ligands: CLA.141, CLA.143, CLA.145, CLA.146, CLA.149, BCR.156
14 PLIP interactions:14 interactions with chain U,- Hydrophobic interactions: U:M.157, U:L.161, U:L.168, U:I.240, U:W.259, U:F.264, U:W.266, U:Y.271, U:Y.271, U:Y.274, U:Y.274, U:L.279
- Hydrogen bonds: U:H.164
- Salt bridges: U:H.164
CLA.148: 21 residues within 4Å:- Chain 1: L.24
- Chain U: W.36, A.37, N.39, A.40, E.269, L.272, L.276, F.436, F.437, V.439, G.440, W.443, H.444, R.447
- Ligands: LHG.102, CLA.149, CLA.150, CLA.151, DGD.159, SQD.165
13 PLIP interactions:12 interactions with chain U, 1 interactions with chain 1,- Hydrophobic interactions: U:N.39, U:A.40, U:L.272, U:L.272, U:F.437, U:F.437, U:V.439, U:W.443, 1:L.24
- Salt bridges: U:H.444, U:R.447
- pi-Stacking: U:W.443
- Metal complexes: U:H.444
CLA.149: 16 residues within 4Å:- Chain U: N.39, I.43, L.49, A.52, H.53, H.56, G.268, E.269, Y.271, L.272, S.275, L.279
- Ligands: CLA.147, CLA.148, CLA.150, CLA.151
8 PLIP interactions:8 interactions with chain U,- Hydrophobic interactions: U:N.39, U:I.43, U:L.49, U:A.52, U:H.56, U:Y.271
- Hydrogen bonds: U:S.275
- Metal complexes: U:H.53
CLA.150: 18 residues within 4Å:- Chain 1: P.20, V.21, L.24
- Chain U: N.39, H.56, L.59, I.60, W.63, L.279, F.436, F.437
- Ligands: LHG.102, CLA.142, CLA.143, CLA.144, CLA.148, CLA.149, CLA.151
10 PLIP interactions:8 interactions with chain U, 2 interactions with chain 1,- Hydrophobic interactions: U:L.59, U:I.60, U:W.63, U:L.279, U:F.436, U:F.437, 1:P.20, 1:V.21
- Hydrogen bonds: U:N.39
- Metal complexes: U:H.56
CLA.151: 32 residues within 4Å:- Chain 1: F.23, A.27, F.28, W.30, Q.31
- Chain 8: X.30, X.31
- Chain 9: M.19, V.20, V.23, P.24
- Chain U: D.27, W.35, G.38, N.39, R.41, L.42, L.45, K.48, A.52, A.55, L.59, A.123, G.126, F.127, V.130, A.133, I.134
- Ligands: CLA.148, CLA.149, CLA.150, BCR.154
16 PLIP interactions:4 interactions with chain 1, 10 interactions with chain U, 2 interactions with chain 9,- Hydrophobic interactions: 1:F.23, 1:F.28, U:W.35, U:L.42, U:L.42, U:K.48, U:A.55, U:L.59, U:F.127, U:V.130, U:I.134, 9:M.19, 9:V.23
- pi-Stacking: 1:W.30, 1:W.30
- Hydrogen bonds: U:R.41
CLA.152: 17 residues within 4Å:- Chain U: H.53, A.57, L.140, F.146, F.147, Y.149, I.160, F.163, H.164, V.167, L.168, G.171
- Ligands: CLA.141, CLA.142, CLA.143, CLA.153, BCR.155
10 PLIP interactions:10 interactions with chain U,- Hydrophobic interactions: U:H.53, U:L.140, U:Y.149, U:I.160, U:F.163, U:F.163, U:F.163, U:F.163, U:V.167, U:V.167
CLA.153: 12 residues within 4Å:- Chain U: L.50, V.54, V.124, L.125, G.128, Y.131, H.132, P.137, L.140, F.147
- Ligands: CLA.152, BCR.155
9 PLIP interactions:9 interactions with chain U,- Hydrophobic interactions: U:L.50, U:V.54, U:V.124, U:L.125, U:Y.131, U:L.140, U:F.147
- Salt bridges: U:H.132
- Metal complexes: U:H.132
CLA.161: 28 residues within 4Å:- Chain S: M.183, F.206
- Chain V: L.45, W.48, L.122, P.149, V.152, F.153, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.279, S.282, A.283, V.286
- Ligands: CLA.93, CLA.94, CLA.95, PHO.97, MGE.166
16 PLIP interactions:14 interactions with chain V, 2 interactions with chain S,- Hydrophobic interactions: V:L.45, V:W.48, V:L.122, V:V.152, V:F.153, V:F.181, V:F.185, V:Q.186, V:T.192, V:V.201, V:V.201, V:V.204, S:F.206, S:F.206
- pi-Stacking: V:W.191
- Metal complexes: V:H.197
CLA.162: 22 residues within 4Å:- Chain 8: X.63, X.64, X.67, X.71
- Chain V: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, T.112, F.113, H.117, F.120
- Ligands: CLA.111, UNK.130, BCR.164
11 PLIP interactions:11 interactions with chain V,- Hydrophobic interactions: V:L.36, V:P.39, V:L.43, V:L.43, V:W.93, V:W.93, V:F.120
- Hydrogen bonds: V:L.92
- Salt bridges: V:H.117
- pi-Stacking: V:F.113
- Metal complexes: V:H.117
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.5: 26 residues within 4Å:- Chain A: L.41, A.44, T.45, I.115, F.119, Y.126, Q.130, A.146, Y.147, P.150, F.158, M.172, L.174, G.175, P.279, V.283
- Chain D: L.205, A.208, L.209, A.212, I.213, W.253, F.257
- Ligands: CLA.2, CLA.3, MGE.78
18 PLIP interactions:14 interactions with chain A, 4 interactions with chain D- Hydrophobic interactions: A:L.41, A:A.44, A:I.115, A:F.119, A:F.119, A:Y.126, A:A.146, A:Y.147, A:Y.147, A:F.158, A:L.174, A:P.279, D:L.205, D:A.208, D:L.209, D:A.212
- Hydrogen bonds: A:Q.130, A:Y.147
PHO.6: 28 residues within 4Å:- Chain A: F.206, A.209, L.210, A.213, M.214, L.258
- Chain D: L.37, A.41, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, P.149, F.153, F.173, G.174, P.275, L.279
- Ligands: CLA.4, PQ9.8, CLA.72
21 PLIP interactions:17 interactions with chain D, 4 interactions with chain A- Hydrophobic interactions: D:A.41, D:L.45, D:W.48, D:I.114, D:L.122, D:F.125, D:F.125, D:A.145, D:P.149, D:F.153, D:F.173, D:P.275, D:L.279, A:F.206, A:A.209, A:L.210, A:A.213
- Hydrogen bonds: D:Q.129, D:N.142
- pi-Stacking: D:F.146, D:F.146
PHO.96: 27 residues within 4Å:- Chain S: L.41, A.44, T.45, I.115, F.119, Y.126, Q.130, A.146, Y.147, P.150, F.158, M.172, L.174, G.175, V.205, P.279, V.283
- Chain V: L.205, A.208, L.209, A.212, I.213, W.253, F.257
- Ligands: CLA.93, CLA.94, MGE.168
19 PLIP interactions:15 interactions with chain S, 4 interactions with chain V- Hydrophobic interactions: S:L.41, S:A.44, S:I.115, S:F.119, S:F.119, S:Y.126, S:A.146, S:Y.147, S:Y.147, S:F.158, S:L.174, S:V.205, S:P.279, V:L.205, V:A.208, V:L.209, V:A.212
- Hydrogen bonds: S:Y.126, S:Q.130
PHO.97: 29 residues within 4Å:- Chain S: F.206, A.209, L.210, A.213, M.214, L.258
- Chain V: L.37, A.41, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, P.149, F.153, F.173, G.174, V.175, P.275, L.279
- Ligands: CLA.95, PQ9.99, CLA.161
19 PLIP interactions:16 interactions with chain V, 3 interactions with chain S- Hydrophobic interactions: V:A.41, V:L.45, V:W.48, V:I.114, V:L.122, V:F.125, V:F.125, V:A.145, V:F.153, V:F.173, V:P.275, V:L.279, S:F.206, S:A.209, S:L.210
- Hydrogen bonds: V:Q.129, V:N.142
- pi-Stacking: V:F.146, V:F.146
- 4 x PQ9: 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE(Non-covalent)
PQ9.8: 12 residues within 4Å:- Chain A: F.211, M.214, H.215, L.218, A.251, H.252, F.255, S.264, F.265, L.271, F.274
- Ligands: PHO.6
15 PLIP interactions:15 interactions with chain A- Hydrophobic interactions: A:F.211, A:F.211, A:M.214, A:L.218, A:A.251, A:H.252, A:F.255, A:F.255, A:F.255, A:F.265, A:F.265, A:L.271, A:L.271, A:F.274
- Hydrogen bonds: A:F.265
PQ9.74: 22 residues within 4Å:- Chain D: A.202, G.203, L.209, L.210, I.213, H.214, T.217, M.246, A.249, N.250, W.253, I.259, A.260, F.261, L.267, F.270, F.273, V.274, T.277
- Ligands: UNK.35, MGE.78, MGE.84
17 PLIP interactions:17 interactions with chain D- Hydrophobic interactions: D:L.209, D:L.210, D:I.213, D:T.217, D:A.249, D:W.253, D:F.261, D:F.261, D:F.261, D:L.267, D:F.270, D:F.273, D:V.274, D:T.277
- Hydrogen bonds: D:T.217, D:F.261
- pi-Stacking: D:F.261
PQ9.99: 13 residues within 4Å:- Chain S: F.211, M.214, H.215, L.218, A.251, H.252, F.255, S.264, F.265, L.271, F.274
- Ligands: PHO.97, UNK.135
16 PLIP interactions:16 interactions with chain S- Hydrophobic interactions: S:F.211, S:F.211, S:M.214, S:L.218, S:L.218, S:A.251, S:H.252, S:F.255, S:F.255, S:F.255, S:F.265, S:F.265, S:L.271, S:L.271, S:F.274
- Hydrogen bonds: S:F.265
PQ9.163: 22 residues within 4Å:- Chain V: A.202, G.203, L.209, L.210, I.213, H.214, T.217, M.246, A.249, N.250, W.253, I.259, A.260, F.261, L.267, F.270, F.273, V.274, T.277
- Ligands: UNK.124, MGE.168, MGE.174
16 PLIP interactions:16 interactions with chain V- Hydrophobic interactions: V:L.209, V:L.210, V:I.213, V:T.217, V:A.249, V:W.253, V:F.261, V:F.261, V:F.261, V:L.267, V:F.270, V:F.273, V:V.274, V:T.277
- Hydrogen bonds: V:F.261
- pi-Stacking: V:F.261
- 2 x OEC: OXYGEN EVOLVING SYSTEM(Covalent)
OEC.9: 7 residues within 4Å:- Chain A: D.170, E.189, H.332, E.333, D.342, A.344
- Chain C: E.354
13 PLIP interactions:3 interactions with chain C, 10 interactions with chain A- Metal complexes: C:E.354, C:E.354, C:E.354, A:D.170, A:E.189, A:E.189, A:H.332, A:E.333, A:E.333, A:D.342, A:D.342, A:A.344, A:A.344
OEC.100: 9 residues within 4Å:- Chain S: D.61, D.170, E.189, H.332, E.333, H.337, D.342, A.344
- Chain U: E.354
14 PLIP interactions:11 interactions with chain S, 3 interactions with chain U- Metal complexes: S:D.170, S:E.189, S:E.189, S:H.332, S:E.333, S:E.333, S:E.333, S:D.342, S:D.342, S:A.344, S:A.344, U:E.354, U:E.354, U:E.354
- 22 x BCR: BETA-CAROTENE(Non-covalent)
BCR.10: 18 residues within 4Å:- Chain A: V.35, I.38, P.39, L.42, A.43, I.46, C.47, I.50, A.51, A.54, I.96, L.102, W.105, L.106, L.114
- Chain H: F.15
- Ligands: CLA.7, LMT.13
Ligand excluded by PLIPBCR.31: 17 residues within 4Å:- Chain 5: F.19
- Chain B: A.21, M.25, L.29, A.111, C.112, W.115
- Chain L: A.10, L.13
- Ligands: CLA.21, CLA.27, CLA.28, BCR.32, MGE.34, LMT.86, BCR.176, SQD.177
Ligand excluded by PLIPBCR.32: 15 residues within 4Å:- Chain B: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105
- Ligands: CLA.21, CLA.27, BCR.31, MGE.34, BCR.176, SQD.177, LMT.178
Ligand excluded by PLIPBCR.33: 14 residues within 4Å:- Chain 5: F.18, F.22
- Chain B: L.103, L.106, L.109, A.110, C.112, V.116, Y.117
- Ligands: CLA.19, CLA.20, CLA.29, CLA.30, SQD.92
Ligand excluded by PLIPBCR.65: 22 residues within 4Å:- Chain C: A.55, H.56, G.58, L.59, V.116, L.119, S.122, A.123, G.126, A.133
- Chain J: Y.6, F.9, F.23, L.26, A.27, W.30
- Chain R: L.9, L.12, V.13
- Ligands: CLA.62, BCR.66, BCR.90
Ligand excluded by PLIPBCR.66: 14 residues within 4Å:- Chain C: F.112, V.116, I.120, S.121, V.124, L.125, F.147
- Chain J: Y.6
- Chain R: V.54, G.55, N.58
- Ligands: CLA.63, CLA.64, BCR.65
Ligand excluded by PLIPBCR.67: 17 residues within 4Å:- Chain C: I.209, Y.212, L.213, I.224, V.227, D.232, V.233, G.236, H.237, F.264
- Chain H: V.20, F.23, L.24
- Ligands: CLA.52, CLA.56, CLA.57, CLA.58
Ligand excluded by PLIPBCR.75: 18 residues within 4Å:- Chain D: Y.42, L.43, G.46, G.47, L.49, T.50, F.101, W.104, F.113
- Chain F: P.29, T.30, F.33, I.37
- Chain I: V.21, V.25, F.28
- Ligands: CLA.73, MGE.76
Ligand excluded by PLIPBCR.80: 14 residues within 4Å:- Chain G: M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Chain Q: X.52, X.57, X.61
- Ligands: CLA.15, CLA.17, CLA.23, CLA.24
Ligand excluded by PLIPBCR.88: 22 residues within 4Å:- Chain A: L.28
- Chain N: I.4, F.8, A.11, I.14, A.15, F.17, F.18, I.21, F.22
- Chain T: W.33, S.36, M.37, Y.40, L.109
- Ligands: SQD.14, MGE.78, SQD.85, LMT.87, CLA.110, BCR.120, BCR.121
Ligand excluded by PLIPBCR.90: 20 residues within 4Å:- Chain I: A.14, T.15, G.18, M.19
- Chain J: L.12, I.19, L.22, F.23, A.25, L.26, F.28, V.29, A.32
- Chain Q: X.13, X.14, X.17
- Chain R: V.13, S.16, F.17
- Ligands: BCR.65
Ligand excluded by PLIPBCR.101: 17 residues within 4Å:- Chain S: V.35, I.38, P.39, L.42, A.43, C.47, I.50, A.51, A.54, I.96, L.102, W.105, L.106, L.114
- Chain Z: F.15
- Ligands: CLA.98, LMT.103
Ligand excluded by PLIPBCR.120: 18 residues within 4Å:- Chain 3: L.6, A.10, L.13
- Chain N: F.19
- Chain T: A.21, M.25, L.29, A.111, C.112, W.115
- Ligands: SQD.85, BCR.88, CLA.110, CLA.116, CLA.117, BCR.121, MGE.123, LMT.175
Ligand excluded by PLIPBCR.121: 15 residues within 4Å:- Chain T: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105
- Ligands: SQD.85, LMT.87, BCR.88, CLA.110, CLA.116, BCR.120, MGE.123
Ligand excluded by PLIPBCR.122: 14 residues within 4Å:- Chain N: F.18, F.22
- Chain T: L.103, L.106, L.109, A.110, C.112, V.116, Y.117
- Ligands: SQD.14, CLA.108, CLA.109, CLA.118, CLA.119
Ligand excluded by PLIPBCR.154: 23 residues within 4Å:- Chain 1: Y.6, F.9, F.23, L.26, A.27, W.30
- Chain 9: L.9, L.12, V.13
- Chain U: A.55, H.56, G.58, L.59, F.112, V.116, L.119, S.122, A.123, G.126, A.133
- Ligands: CLA.151, BCR.155, BCR.180
Ligand excluded by PLIPBCR.155: 14 residues within 4Å:- Chain 1: Y.6
- Chain 9: V.54, G.55, N.58
- Chain U: F.112, V.116, I.120, S.121, V.124, L.125, F.147
- Ligands: CLA.152, CLA.153, BCR.154
Ligand excluded by PLIPBCR.156: 16 residues within 4Å:- Chain U: I.209, Y.212, L.213, I.224, V.227, D.232, V.233, H.237, F.264
- Chain Z: V.20, F.23, L.24
- Ligands: CLA.141, CLA.145, CLA.146, CLA.147
Ligand excluded by PLIPBCR.164: 17 residues within 4Å:- Chain 0: V.21, V.25
- Chain V: Y.42, L.43, G.46, G.47, L.49, T.50, F.101, W.104, F.113
- Chain X: P.29, T.30, F.33, I.37
- Ligands: CLA.162, MGE.166
Ligand excluded by PLIPBCR.170: 14 residues within 4Å:- Chain 8: X.52, X.57, X.61
- Chain Y: M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Ligands: CLA.104, CLA.106, CLA.112, CLA.113
Ligand excluded by PLIPBCR.176: 20 residues within 4Å:- Chain 5: I.4, F.8, A.11, A.15, F.17, F.18, I.21, F.22
- Chain B: W.33, S.36, M.37, Y.40, L.109
- Chain S: L.28
- Ligands: CLA.21, BCR.31, BCR.32, SQD.92, SQD.177, LMT.178
Ligand excluded by PLIPBCR.180: 20 residues within 4Å:- Chain 0: A.14, T.15, G.18, M.19
- Chain 1: L.12, I.19, L.22, F.23, A.25, L.26, F.28, V.29, A.32
- Chain 8: X.13, X.14, X.17
- Chain 9: V.13, S.16, F.17
- Ligands: BCR.154
Ligand excluded by PLIP- 2 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.11: 20 residues within 4Å:- Chain A: R.140, W.142, V.145, F.273, A.276, A.277, V.281
- Chain C: W.36, F.436, W.443, R.447
- Chain D: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.12, CLA.59, CLA.61
12 PLIP interactions:3 interactions with chain D, 6 interactions with chain A, 3 interactions with chain C- Hydrogen bonds: D:N.220, D:A.229, D:T.231
- Hydrophobic interactions: A:W.142, A:V.145, A:F.273, A:A.276, A:V.281, C:W.36, C:W.36, C:F.436
- Salt bridges: A:R.140
LHG.102: 20 residues within 4Å:- Chain S: R.140, W.142, V.145, F.273, A.276, A.277, V.281
- Chain U: W.36, F.436, W.443, R.447
- Chain V: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: CLA.148, CLA.150, SQD.165
14 PLIP interactions:3 interactions with chain V, 5 interactions with chain U, 6 interactions with chain S- Hydrogen bonds: V:N.220, V:A.229, V:T.231, U:R.447
- Hydrophobic interactions: U:W.36, U:W.36, U:F.436, U:F.436, S:W.142, S:V.145, S:F.273, S:A.276, S:V.281
- Salt bridges: S:R.140
- 6 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.12: 13 residues within 4Å:- Chain A: N.267, S.270, F.273, F.274
- Chain C: E.29, W.35, W.36
- Chain D: S.230, F.232, R.233
- Ligands: LHG.11, CLA.59, MGE.76
8 PLIP interactions:3 interactions with chain A, 2 interactions with chain D, 3 interactions with chain C- Hydrophobic interactions: A:F.273, C:W.35
- Hydrogen bonds: A:N.267, A:S.270, D:S.230, C:E.29, C:E.29
- Salt bridges: D:R.233
SQD.14: 9 residues within 4Å:- Chain A: W.20, N.26, R.27, L.28
- Chain N: F.22
- Chain T: W.113, Y.117
- Ligands: BCR.88, BCR.122
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:W.20, A:L.28
SQD.85: 19 residues within 4Å:- Chain 2: N.4
- Chain K: R.14, Y.18, L.21
- Chain L: Y.26
- Chain N: L.16, F.19, F.23, R.24
- Chain T: R.18, A.28, L.29, S.104, F.108
- Ligands: UNK.36, BCR.88, CLA.117, BCR.120, BCR.121
13 PLIP interactions:6 interactions with chain K, 1 interactions with chain 2, 3 interactions with chain N, 3 interactions with chain T- Hydrophobic interactions: K:Y.18, K:L.21, N:L.16, N:F.19, T:L.29, T:F.108
- Hydrogen bonds: K:R.14, K:R.14, K:Y.18, 2:N.4, N:R.24
- Salt bridges: K:R.14, T:R.18
SQD.92: 9 residues within 4Å:- Chain 5: F.22
- Chain B: W.113, Y.117
- Chain S: W.20, N.26, R.27, L.28
- Ligands: BCR.33, BCR.176
3 PLIP interactions:3 interactions with chain S- Hydrogen bonds: S:W.20, S:N.26, S:L.28
SQD.165: 13 residues within 4Å:- Chain S: N.267, S.270, F.273, F.274
- Chain U: E.29, W.35, W.36
- Chain V: S.230, F.232, R.233
- Ligands: LHG.102, CLA.148, MGE.166
8 PLIP interactions:3 interactions with chain U, 2 interactions with chain V, 3 interactions with chain S- Hydrophobic interactions: U:W.35, S:F.273
- Hydrogen bonds: U:E.29, U:E.29, V:S.230, S:N.267, S:S.270
- Salt bridges: V:R.233
SQD.177: 18 residues within 4Å:- Chain 2: R.14, Y.18, L.21
- Chain 3: Y.26
- Chain 5: F.19, F.23, R.24
- Chain B: R.18, A.28, L.29, S.104, F.108
- Chain K: N.4
- Ligands: CLA.28, BCR.31, BCR.32, UNK.125, BCR.176
10 PLIP interactions:1 interactions with chain 5, 5 interactions with chain 2, 3 interactions with chain B, 1 interactions with chain K- Hydrophobic interactions: 5:F.19, 2:Y.18, 2:L.21, B:L.29, B:F.108
- Hydrogen bonds: 2:R.14, 2:Y.18, K:N.4
- Salt bridges: 2:R.14, B:R.18
- 6 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.13: 13 residues within 4Å:- Chain A: I.50, L.72, Y.73
- Chain D: R.304
- Chain M: G.114, E.115
- Chain T: L.42, A.43, L.98
- Ligands: BCR.10, UNK.49, UNK.50, LMT.87
5 PLIP interactions:3 interactions with chain T, 1 interactions with chain A, 1 interactions with chain D- Hydrophobic interactions: T:L.98, T:L.98
- Hydrogen bonds: T:A.43, A:L.72, D:R.304
LMT.86: 12 residues within 4Å:- Chain 3: M.1, E.2, Q.5
- Chain 5: M.1, I.4
- Chain B: Y.40
- Chain L: Q.5, L.6
- Ligands: BCR.31, MGE.34, LMT.175, LMT.178
4 PLIP interactions:3 interactions with chain 3, 1 interactions with chain L- Hydrogen bonds: 3:M.1, 3:E.2, 3:Q.5, L:Q.5
LMT.87: 15 residues within 4Å:- Chain A: I.53, L.72
- Chain N: M.1, I.4, V.7, A.11, I.14
- Chain T: L.39, Y.40, A.43, T.44
- Ligands: LMT.13, BCR.88, BCR.121, LMT.175
7 PLIP interactions:4 interactions with chain N, 2 interactions with chain T, 1 interactions with chain A- Hydrophobic interactions: N:A.11, N:I.14, T:L.39, A:I.53
- Hydrogen bonds: N:M.1, N:M.1, T:A.43
LMT.103: 12 residues within 4Å:- Chain 4: G.114, E.115
- Chain B: A.43, L.98
- Chain S: I.50, L.72, Y.73
- Chain V: R.304
- Ligands: BCR.101, UNK.138, UNK.139, LMT.178
7 PLIP interactions:3 interactions with chain B, 1 interactions with chain V, 2 interactions with chain S, 1 interactions with chain 4- Hydrophobic interactions: B:L.98, B:L.98
- Hydrogen bonds: B:A.43, V:R.304, S:L.72, S:Y.73, 4:G.114
LMT.175: 12 residues within 4Å:- Chain 3: Q.5, L.6
- Chain L: M.1, E.2, Q.5
- Chain N: M.1, I.4
- Chain T: Y.40
- Ligands: LMT.86, LMT.87, BCR.120, MGE.123
4 PLIP interactions:1 interactions with chain 3, 3 interactions with chain L- Hydrogen bonds: 3:Q.5, L:M.1, L:E.2, L:Q.5
LMT.178: 15 residues within 4Å:- Chain 5: M.1, I.4, V.7, A.11, I.14
- Chain B: L.39, Y.40, A.43, T.44
- Chain S: I.53, L.72
- Ligands: BCR.32, LMT.86, LMT.103, BCR.176
6 PLIP interactions:3 interactions with chain 5, 1 interactions with chain S, 2 interactions with chain B- Hydrophobic interactions: 5:A.11, 5:I.14, S:I.53, B:L.39
- Hydrogen bonds: 5:M.1, B:A.43
- 12 x MGE: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE(Non-covalent)
MGE.34: 14 residues within 4Å:- Chain B: T.327, G.328, P.329, K.332, F.453
- Chain K: F.35
- Chain L: N.4, L.6, A.10, L.13
- Ligands: CLA.21, BCR.31, BCR.32, LMT.86
8 PLIP interactions:4 interactions with chain B, 3 interactions with chain L, 1 interactions with chain K- Hydrophobic interactions: B:T.327, B:F.453, L:A.10, L:L.13, K:F.35
- Hydrogen bonds: B:T.327, B:G.328, L:N.4
MGE.76: 21 residues within 4Å:- Chain D: L.49, Y.67, G.70, C.71, N.72, F.73
- Chain F: L.26, T.30, I.37, M.40, Q.41
- Chain I: F.28, G.31, A.32, G.35, G.37
- Ligands: CLA.4, SQD.12, DGD.70, CLA.72, BCR.75
10 PLIP interactions:5 interactions with chain D, 2 interactions with chain F, 3 interactions with chain I- Hydrophobic interactions: D:L.49, D:L.49, D:F.73, F:L.26
- Hydrogen bonds: D:Y.67, D:Y.67, F:Q.41, I:F.28, I:G.31, I:G.37
MGE.77: 15 residues within 4Å:- Chain A: N.234
- Chain B: W.5, Y.6, R.7, F.464, W.468
- Chain D: R.139, Y.141, F.269, F.273, V.276, T.277
- Ligands: CLA.25, CLA.27, MGE.84
8 PLIP interactions:3 interactions with chain B, 5 interactions with chain D- Hydrophobic interactions: B:F.464, D:F.269, D:F.273, D:F.273, D:V.276
- Hydrogen bonds: B:Y.6, B:R.7, D:R.139
MGE.78: 22 residues within 4Å:- Chain D: I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Chain K: N.13, T.15, Y.18, L.19, L.22
- Chain N: F.10, I.13, F.17, A.20
- Ligands: CLA.2, CLA.3, PHO.5, PQ9.74, MGE.84, BCR.88
11 PLIP interactions:6 interactions with chain N, 1 interactions with chain K, 4 interactions with chain D- Hydrophobic interactions: N:F.10, N:I.13, N:F.17, N:F.17, N:F.17, N:A.20, D:F.270
- Hydrogen bonds: K:N.13, D:A.260, D:S.262, D:S.262
MGE.82: 17 residues within 4Å:- Chain A: F.93, W.97, E.98, F.117, L.121, F.155
- Chain C: L.214, K.215, S.216, F.218, W.223, M.281, F.284
- Chain H: K.5, Y.9
- Ligands: CLA.7, DGD.68
12 PLIP interactions:3 interactions with chain A, 7 interactions with chain C, 2 interactions with chain H- Hydrophobic interactions: A:F.117, A:L.121, A:F.155, C:F.218, C:W.223, C:W.223, C:M.281, C:F.284
- Hydrogen bonds: C:S.216, C:S.216, H:K.5, H:Y.9
MGE.84: 27 residues within 4Å:- Chain A: S.232, N.234
- Chain B: P.4, W.5, Y.6
- Chain D: W.266, F.270, F.273
- Chain K: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23
- Chain L: V.17, P.18, F.21, L.22
- Ligands: CLA.3, CLA.25, CLA.28, UNK.35, PQ9.74, MGE.77, MGE.78
15 PLIP interactions:1 interactions with chain A, 5 interactions with chain K, 2 interactions with chain B, 4 interactions with chain D, 3 interactions with chain L- Hydrogen bonds: A:N.234, K:E.11, K:S.16, B:Y.6
- Hydrophobic interactions: K:L.22, K:L.22, K:L.23, B:W.5, D:F.270, D:F.273, D:F.273, D:F.273, L:V.17, L:P.18, L:F.21
MGE.123: 14 residues within 4Å:- Chain 2: F.35
- Chain 3: N.4, L.6, A.10, L.13
- Chain T: T.327, G.328, P.329, K.332, F.453
- Ligands: CLA.110, BCR.120, BCR.121, LMT.175
8 PLIP interactions:4 interactions with chain T, 3 interactions with chain 3, 1 interactions with chain 2- Hydrophobic interactions: T:T.327, T:F.453, 3:A.10, 3:L.13, 2:F.35
- Hydrogen bonds: T:T.327, T:G.328, 3:N.4
MGE.166: 21 residues within 4Å:- Chain 0: F.28, G.31, A.32, G.35, G.37
- Chain V: L.49, Y.67, G.70, C.71, N.72, F.73
- Chain X: L.26, T.30, I.37, M.40, Q.41
- Ligands: CLA.95, DGD.159, CLA.161, BCR.164, SQD.165
10 PLIP interactions:2 interactions with chain X, 5 interactions with chain V, 3 interactions with chain 0- Hydrophobic interactions: X:L.26, V:L.49, V:L.49, V:F.73
- Hydrogen bonds: X:Q.41, V:Y.67, V:Y.67, 0:F.28, 0:G.31, 0:G.37
MGE.167: 15 residues within 4Å:- Chain S: N.234
- Chain T: W.5, Y.6, R.7, F.464, W.468
- Chain V: R.139, Y.141, F.269, F.273, V.276, T.277
- Ligands: CLA.114, CLA.116, MGE.174
8 PLIP interactions:3 interactions with chain T, 5 interactions with chain V- Hydrophobic interactions: T:F.464, V:F.269, V:F.273, V:F.273, V:V.276
- Hydrogen bonds: T:Y.6, T:R.7, V:R.139
MGE.168: 21 residues within 4Å:- Chain 2: N.13, T.15, Y.18, L.19, L.22
- Chain 5: F.10, I.13, F.17, A.20
- Chain V: I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Ligands: CLA.93, CLA.94, PHO.96, PQ9.163, MGE.174
15 PLIP interactions:6 interactions with chain V, 6 interactions with chain 5, 3 interactions with chain 2- Hydrophobic interactions: V:I.259, V:F.270, V:F.270, 5:F.10, 5:I.13, 5:F.17, 5:F.17, 5:F.17, 5:A.20, 2:L.19
- Hydrogen bonds: V:A.260, V:S.262, V:S.262, 2:N.13, 2:T.15
MGE.172: 17 residues within 4Å:- Chain S: F.93, W.97, E.98, F.117, L.121, F.155
- Chain U: L.214, K.215, S.216, F.218, W.223, M.281, F.284
- Chain Z: K.5, Y.9
- Ligands: CLA.98, DGD.157
11 PLIP interactions:3 interactions with chain S, 7 interactions with chain U, 1 interactions with chain Z- Hydrophobic interactions: S:F.117, S:L.121, S:F.155, U:F.218, U:W.223, U:W.223, U:M.281, U:F.284
- Hydrogen bonds: U:S.216, U:S.216, Z:K.5
MGE.174: 27 residues within 4Å:- Chain 2: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23
- Chain 3: V.17, P.18, F.21, L.22
- Chain S: S.232, N.234
- Chain T: P.4, W.5, Y.6
- Chain V: W.266, F.270, F.273
- Ligands: CLA.94, CLA.114, CLA.117, UNK.124, PQ9.163, MGE.167, MGE.168
14 PLIP interactions:2 interactions with chain T, 4 interactions with chain 2, 2 interactions with chain 3, 2 interactions with chain S, 4 interactions with chain V- Hydrophobic interactions: T:W.5, 2:L.22, 2:L.23, 3:V.17, 3:P.18, V:F.270, V:F.273, V:F.273, V:F.273
- Hydrogen bonds: T:Y.6, 2:E.11, 2:S.16, S:N.234, S:N.234
- 34 x UNK: UNKNOWN(Non-covalent)(Covalent)(Non-functional Binders)
UNK.35: 10 residues within 4Å:- Chain A: F.52, I.77
- Chain D: M.199, A.202
- Chain K: V.26, L.29
- Chain N: F.10
- Ligands: CLA.3, PQ9.74, MGE.84
6 PLIP interactions:2 interactions with chain K, 1 interactions with chain D, 1 interactions with chain N, 2 interactions with chain A- Hydrophobic interactions: K:V.26, K:L.29, D:A.202, N:F.10, A:F.52, A:I.77
UNK.36: 6 residues within 4Å:- Chain L: I.23, V.27, S.36
- Ligands: UNK.37, SQD.85, CLA.117
3 PLIP interactions:3 interactions with chain L- Hydrophobic interactions: L:I.23, L:I.23, L:V.27
UNK.37: 4 residues within 4Å:- Chain 3: I.24
- Chain L: S.36
- Ligands: UNK.36, CLA.117
1 PLIP interactions:1 interactions with chain 3- Hydrophobic interactions: 3:I.24
UNK.38: 5 residues within 4Å:- Chain C: V.61, V.117, H.118, S.121
- Ligands: CLA.54
2 PLIP interactions:2 interactions with chain C- Hydrophobic interactions: C:V.61, C:V.117
UNK.39: 3 residues within 4Å:- Chain C: F.70
- Ligands: CLA.55, DGD.69
1 PLIP interactions:1 interactions with chain C- Hydrophobic interactions: C:F.70
UNK.40: 5 residues within 4Å:- Chain I: G.26, F.29, Y.30, Y.33
- Ligands: DGD.69
3 PLIP interactions:3 interactions with chain I- Hydrophobic interactions: I:F.29, I:Y.30, I:Y.33
UNK.41: 3 residues within 4Å:- Chain D: W.93
- Chain Q: X.70
- Ligands: CLA.73
1 PLIP interactions:1 interactions with chain D- Hydrophobic interactions: D:W.93
UNK.42: 7 residues within 4Å:- Chain D: W.32, F.130
- Chain Q: X.71
- Ligands: CLA.22, UNK.43, UNK.44, UNK.51
No protein-ligand interaction detected (PLIP)UNK.43: 8 residues within 4Å:- Chain B: A.228, L.229
- Chain G: L.39
- Ligands: CLA.22, CLA.23, UNK.42, UNK.44, UNK.51
1 PLIP interactions:1 interactions with chain G- Hydrophobic interactions: G:L.39
UNK.44: 7 residues within 4Å:- Chain D: F.15, K.23, W.32
- Chain Q: X.75
- Ligands: UNK.42, UNK.43, UNK.51
3 PLIP interactions:3 interactions with chain D- Hydrophobic interactions: D:F.15, D:W.32, D:W.32
UNK.45: 5 residues within 4Å:- Chain A: F.260
- Chain D: V.28
- Chain F: A.22, V.23
- Ligands: UNK.46
3 PLIP interactions:1 interactions with chain F, 1 interactions with chain A, 1 interactions with chain D- Hydrophobic interactions: F:A.22, A:F.260, D:V.28
UNK.46: 4 residues within 4Å:- Chain A: L.258, I.259
- Chain D: R.128
- Ligands: UNK.45
No protein-ligand interaction detected (PLIP)UNK.47: 2 residues within 4Å:- Chain T: F.90
- Ligands: UNK.49
2 PLIP interactions:2 interactions with chain T- Hydrophobic interactions: T:F.90, T:F.90
UNK.48: 1 residues within 4Å:- Chain H: L.4
1 PLIP interactions:1 interactions with chain H- Hydrophobic interactions: H:L.4
UNK.49: 3 residues within 4Å:- Chain T: W.75
- Ligands: LMT.13, UNK.47
2 PLIP interactions:2 interactions with chain T- Hydrophobic interactions: T:W.75, T:W.75
UNK.50: 5 residues within 4Å:- Chain A: L.102, D.103
- Chain T: W.75, S.76
- Ligands: LMT.13
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:L.102
UNK.51: 4 residues within 4Å:- Chain B: R.230
- Ligands: UNK.42, UNK.43, UNK.44
No protein-ligand interaction detected (PLIP)UNK.124: 10 residues within 4Å:- Chain 2: V.26, L.29
- Chain 5: F.10
- Chain S: F.52, I.77
- Chain V: M.199, A.202
- Ligands: CLA.94, PQ9.163, MGE.174
6 PLIP interactions:2 interactions with chain 2, 1 interactions with chain V, 2 interactions with chain S, 1 interactions with chain 5- Hydrophobic interactions: 2:V.26, 2:L.29, V:A.202, S:F.52, S:I.77, 5:F.10
UNK.125: 6 residues within 4Å:- Chain 3: I.23, V.27, S.36
- Ligands: CLA.28, UNK.126, SQD.177
3 PLIP interactions:3 interactions with chain 3- Hydrophobic interactions: 3:I.23, 3:I.23, 3:V.27
UNK.126: 4 residues within 4Å:- Chain 3: S.36
- Chain L: I.24
- Ligands: CLA.28, UNK.125
1 PLIP interactions:1 interactions with chain L- Hydrophobic interactions: L:I.24
UNK.127: 5 residues within 4Å:- Chain U: V.61, V.117, H.118, S.121
- Ligands: CLA.143
2 PLIP interactions:2 interactions with chain U- Hydrophobic interactions: U:V.61, U:V.117
UNK.128: 3 residues within 4Å:- Chain U: F.70
- Ligands: CLA.144, DGD.158
1 PLIP interactions:1 interactions with chain U- Hydrophobic interactions: U:F.70
UNK.129: 5 residues within 4Å:- Chain 0: G.26, F.29, Y.30, Y.33
- Ligands: DGD.158
4 PLIP interactions:4 interactions with chain 0- Hydrophobic interactions: 0:F.29, 0:Y.30, 0:Y.30, 0:Y.33
UNK.130: 3 residues within 4Å:- Chain 8: X.70
- Chain V: W.93
- Ligands: CLA.162
1 PLIP interactions:1 interactions with chain V- Hydrophobic interactions: V:W.93
UNK.131: 6 residues within 4Å:- Chain 8: X.71
- Chain V: W.32, F.130
- Ligands: CLA.111, UNK.133, UNK.140
No protein-ligand interaction detected (PLIP)UNK.132: 7 residues within 4Å:- Chain T: A.228, L.229
- Chain Y: L.39
- Ligands: CLA.111, CLA.112, UNK.133, UNK.140
1 PLIP interactions:1 interactions with chain Y- Hydrophobic interactions: Y:L.39
UNK.133: 7 residues within 4Å:- Chain 8: X.75
- Chain V: F.15, K.23, W.32
- Ligands: UNK.131, UNK.132, UNK.140
3 PLIP interactions:3 interactions with chain V- Hydrophobic interactions: V:F.15, V:W.32, V:W.32
UNK.134: 5 residues within 4Å:- Chain S: F.260
- Chain V: V.28
- Chain X: A.22, V.23
- Ligands: UNK.135
3 PLIP interactions:1 interactions with chain S, 1 interactions with chain X, 1 interactions with chain V- Hydrophobic interactions: S:F.260, X:A.22, V:V.28
UNK.135: 5 residues within 4Å:- Chain S: L.258, I.259
- Chain V: R.128
- Ligands: PQ9.99, UNK.134
1 PLIP interactions:1 interactions with chain S- Hydrophobic interactions: S:I.259
UNK.136: 2 residues within 4Å:- Chain B: F.90
- Ligands: UNK.138
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:F.90, B:F.90
UNK.137: 1 residues within 4Å:- Chain Z: L.4
1 PLIP interactions:1 interactions with chain Z- Hydrophobic interactions: Z:L.4
UNK.138: 3 residues within 4Å:- Chain B: W.75
- Ligands: LMT.103, UNK.136
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:W.75
UNK.139: 4 residues within 4Å:- Chain B: S.76
- Chain S: L.102, D.103
- Ligands: LMT.103
1 PLIP interactions:1 interactions with chain S- Hydrophobic interactions: S:L.102
UNK.140: 4 residues within 4Å:- Chain T: R.230
- Ligands: UNK.131, UNK.132, UNK.133
No protein-ligand interaction detected (PLIP)- 8 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.68: 24 residues within 4Å:- Chain A: L.91, L.151, F.155, L.159, I.160, I.163
- Chain C: W.189, P.217, F.218, G.219, G.220, G.222, V.225, S.226, N.228, F.284, I.285, C.288, F.292, N.294, R.362, F.435, L.438
- Ligands: MGE.82
18 PLIP interactions:5 interactions with chain A, 13 interactions with chain C- Hydrophobic interactions: A:L.151, A:F.155, A:F.155, A:L.159, A:I.160, C:P.217, C:F.218, C:F.218, C:F.284, C:F.284, C:F.284, C:F.435
- Hydrogen bonds: C:P.217, C:G.220, C:N.228, C:N.294, C:N.294, C:R.362
DGD.69: 19 residues within 4Å:- Chain A: F.197, L.297
- Chain C: Y.82, E.83, Q.84, G.85, S.406, N.418, F.419, V.420, W.425, T.428, S.429
- Chain I: F.29, Y.33
- Ligands: UNK.39, UNK.40, CLA.55, DGD.70
12 PLIP interactions:3 interactions with chain A, 6 interactions with chain C, 3 interactions with chain I- Hydrophobic interactions: A:F.197, A:F.197, A:L.297, C:T.428, I:F.29, I:F.29
- Hydrogen bonds: C:E.83, C:G.85, C:S.406, C:N.418, C:W.425, I:Y.33
DGD.70: 26 residues within 4Å:- Chain A: Q.199, L.200, A.203, F.285, F.300, N.301, F.302, S.305
- Chain C: N.405, S.406, V.407, N.415, S.416, N.418
- Chain D: L.74
- Chain I: F.29, A.32, Y.33, G.37, S.38, S.39
- Chain P: Q.34
- Ligands: CLA.4, CLA.59, DGD.69, MGE.76
13 PLIP interactions:2 interactions with chain I, 3 interactions with chain C, 5 interactions with chain A, 2 interactions with chain P, 1 interactions with chain D- Hydrogen bonds: I:A.32, I:S.39, C:N.405, C:N.415, C:S.416, A:S.305, A:S.305, P:Q.34, P:Q.34
- Hydrophobic interactions: A:A.203, A:F.285, A:F.300, D:L.74
DGD.81: 21 residues within 4Å:- Chain B: Y.193, F.250, Y.258, Y.273, Q.274, S.277, F.463
- Chain D: G.86, H.87, L.89, I.123, V.154, L.162, S.165
- Chain G: L.46, Y.49, N.50, V.60, S.61, W.62
- Ligands: CLA.16
14 PLIP interactions:6 interactions with chain D, 4 interactions with chain B, 4 interactions with chain G- Hydrophobic interactions: D:L.89, D:I.123, D:V.154, D:L.162, B:F.463, G:L.46, G:Y.49
- Hydrogen bonds: D:H.87, D:H.87, B:Y.193, B:S.277, B:S.277, G:V.60, G:W.62
DGD.157: 24 residues within 4Å:- Chain S: L.91, L.151, F.155, L.159, I.160, I.163
- Chain U: W.189, P.217, F.218, G.219, G.220, G.222, W.223, V.225, S.226, N.228, F.284, I.285, C.288, F.292, N.294, R.362, L.438
- Ligands: MGE.172
17 PLIP interactions:12 interactions with chain U, 5 interactions with chain S- Hydrophobic interactions: U:P.217, U:F.218, U:F.218, U:F.284, U:F.284, U:F.284, S:L.151, S:F.155, S:F.155, S:L.159, S:I.160
- Hydrogen bonds: U:P.217, U:G.220, U:N.228, U:F.292, U:N.294, U:R.362
DGD.158: 19 residues within 4Å:- Chain 0: F.29, Y.33
- Chain S: F.197, L.297
- Chain U: Y.82, E.83, Q.84, G.85, S.406, N.418, F.419, V.420, W.425, T.428, S.429
- Ligands: UNK.128, UNK.129, CLA.144, DGD.159
11 PLIP interactions:5 interactions with chain U, 3 interactions with chain 0, 3 interactions with chain S- Hydrogen bonds: U:E.83, U:G.85, U:S.406, U:N.418, U:W.425, 0:Y.33
- Hydrophobic interactions: 0:F.29, 0:F.29, S:F.197, S:F.197, S:L.297
DGD.159: 27 residues within 4Å:- Chain 0: F.29, A.32, Y.33, G.37, S.38, S.39
- Chain 7: Q.34
- Chain S: P.196, Q.199, L.200, A.203, F.285, F.300, N.301, F.302, S.305
- Chain U: N.405, S.406, V.407, N.415, S.416, N.418
- Chain V: L.74
- Ligands: CLA.95, CLA.148, DGD.158, MGE.166
14 PLIP interactions:5 interactions with chain S, 3 interactions with chain 0, 2 interactions with chain 7, 3 interactions with chain U, 1 interactions with chain V- Hydrophobic interactions: S:P.196, S:A.203, S:F.285, S:F.300, 0:F.29, V:L.74
- Hydrogen bonds: S:S.305, 0:A.32, 0:S.39, 7:Q.34, 7:Q.34, U:N.405, U:N.415, U:S.416
DGD.171: 21 residues within 4Å:- Chain T: Y.193, F.250, Y.258, Y.273, Q.274, S.277, F.463
- Chain V: G.86, H.87, I.123, V.154, L.162, S.165
- Chain Y: L.46, Y.49, N.50, V.60, S.61, W.62
- Ligands: CLA.105, CLA.111
14 PLIP interactions:5 interactions with chain V, 5 interactions with chain T, 4 interactions with chain Y- Hydrophobic interactions: V:I.123, V:V.154, V:L.162, T:F.463, Y:L.46, Y:Y.49
- Hydrogen bonds: V:H.87, V:S.165, T:Y.193, T:Y.193, T:S.277, T:S.277, Y:V.60, Y:W.62
- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.71: 9 residues within 4Å:- Chain A: H.215, E.244, Y.246, H.272
- Chain D: H.214, Y.244, K.264, H.268
- Ligands: FE2.1
3 PLIP interactions:1 interactions with chain D, 2 interactions with chain A- Hydrogen bonds: D:Y.244, A:Y.246, A:Y.246
BCT.160: 9 residues within 4Å:- Chain S: H.215, E.244, Y.246, H.272
- Chain V: H.214, Y.244, K.264, H.268
- Ligands: FE2.91
4 PLIP interactions:2 interactions with chain V, 2 interactions with chain S- Hydrogen bonds: V:Y.244, V:Y.244, S:Y.246, S:Y.246
- 4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.79: 17 residues within 4Å:- Chain E: F.10, I.13, R.18, Y.19, I.22, H.23, T.26, I.27, L.30
- Chain F: I.15, F.16, R.19, W.20, H.24, A.27, I.31
- Chain Q: X.116
15 PLIP interactions:7 interactions with chain E, 8 interactions with chain F,- Hydrophobic interactions: E:I.13, E:Y.19, E:T.26, E:I.27, E:L.30, F:F.16, F:A.27, F:I.31
- Salt bridges: E:R.18, F:R.19
- Metal complexes: E:H.23, F:H.24
- Hydrogen bonds: F:I.15
- pi-Stacking: F:W.20, F:W.20
HEM.89: 20 residues within 4Å:- Chain P: A.36, C.37, C.40, H.41, T.48, N.49, L.52, D.53, L.54, T.58, L.59, A.62, L.72, Y.75, M.76, Y.82, H.92, P.93, M.104, I.115
19 PLIP interactions:19 interactions with chain P,- Hydrophobic interactions: P:A.36, P:N.49, P:L.52, P:L.54, P:L.59, P:L.72, P:Y.75, P:P.93, P:I.115
- Hydrogen bonds: P:N.49, P:Y.82
- pi-Stacking: P:H.41, P:H.41, P:Y.75, P:H.92, P:H.92
- pi-Cation interactions: P:H.41
- Metal complexes: P:H.41, P:H.92
HEM.169: 16 residues within 4Å:- Chain 8: X.116
- Chain W: F.10, I.13, R.18, Y.19, H.23, T.26, I.27, L.30
- Chain X: I.15, F.16, R.19, W.20, H.24, A.27, I.31
21 PLIP interactions:11 interactions with chain X, 10 interactions with chain W,- Hydrophobic interactions: X:F.16, X:W.20, X:A.27, X:I.31, W:F.10, W:I.13, W:Y.19, W:T.26, W:I.27, W:L.30
- Hydrogen bonds: X:I.15
- Salt bridges: X:R.19, W:R.18
- pi-Stacking: X:W.20, X:W.20, X:H.24, X:H.24, X:H.24, W:H.23, W:H.23
- Metal complexes: W:H.23
HEM.179: 21 residues within 4Å:- Chain 7: A.36, C.37, C.40, H.41, T.48, N.49, L.52, D.53, L.54, T.58, L.59, A.62, L.72, Y.75, M.76, Y.82, H.92, P.93, M.104, I.115, I.119
18 PLIP interactions:18 interactions with chain 7,- Hydrophobic interactions: 7:A.36, 7:N.49, 7:L.52, 7:L.54, 7:L.59, 7:L.72, 7:Y.75, 7:P.93, 7:I.115, 7:I.119
- Hydrogen bonds: 7:N.49, 7:Y.82
- pi-Stacking: 7:H.41, 7:Y.75, 7:H.92, 7:H.92
- Metal complexes: 7:H.41, 7:H.92
- 2 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Loll, B. et al., Towards complete cofactor arrangement in the 3.0 A resolution structure of photosystem II. NATURE (2005)
- Release Date
- 2005-12-27
- Peptides
- Photosystem Q(B) protein: AS
CP47 protein: BT
photosystem II CP43 protein: CU
photosystem II reaction center D2 protein: DV
Cytochrome b559 alpha subunit: EW
Cytochrome b559 beta subunit: FX
Photosystem II reaction center H protein: GY
Photosystem II reaction center I protein: HZ
Photosystem II reaction center J protein: I0
Photosystem II reaction center protein K: J1
Photosystem II reaction center L protein: K2
Photosystem II reaction center M protein: L3
Photosystem II manganese-stabilizing polypeptide: M4
Photosystem II reaction center T protein: N5
Photosystem II 12 kDa extrinsic protein: O6
Cytochrome c-550: P7
Unassigned subunits: Q8
Photosystem II reaction center Z protein: R9 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AS
aB
BT
bC
CU
cD
DV
dE
EW
eF
FX
fG
HY
hH
IZ
iI
J0
jJ
K1
kK
L2
lL
M3
mM
O4
oN
T5
tO
U6
uP
V7
vQ
X8
xR
Z9
z - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 2axt.1
Crystal Structure of Photosystem II from Thermosynechococcus elongatus
Photosystem Q(B) protein
Toggle Identical (AS)CP47 protein
Toggle Identical (BT)photosystem II CP43 protein
Toggle Identical (CU)photosystem II reaction center D2 protein
Toggle Identical (DV)Cytochrome b559 alpha subunit
Toggle Identical (EW)Cytochrome b559 beta subunit
Toggle Identical (FX)Photosystem II reaction center H protein
Toggle Identical (GY)Photosystem II reaction center I protein
Toggle Identical (HZ)Photosystem II reaction center J protein
Toggle Identical (I0)Photosystem II reaction center protein K
Toggle Identical (J1)Photosystem II reaction center L protein
Toggle Identical (K2)Photosystem II reaction center M protein
Toggle Identical (L3)Photosystem II manganese-stabilizing polypeptide
Toggle Identical (M4)Photosystem II reaction center T protein
Toggle Identical (N5)Photosystem II 12 kDa extrinsic protein
Toggle Identical (O6)Cytochrome c-550
Toggle Identical (P7)Unassigned subunits
Toggle Identical (Q8)Photosystem II reaction center Z protein
Toggle Identical (R9)Related Entries With Identical Sequence
1izl.1 | 1mz4.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1 more...less...5e79.1 | 5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kaf.1 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1 | 9evx.1