- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 2 x OEX: CA-MN4-O5 CLUSTER(Covalent)
- 2 x FE2: FE (II) ION(Non-covalent)
FE2.2: 5 residues within 4Å:- Chain A: H.215, H.272
- Chain D: H.214, H.268
- Ligands: BCT.20
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain D- Metal complexes: A:H.215, A:H.272, D:H.214, D:H.268
FE2.91: 5 residues within 4Å:- Chain U: H.215, H.272
- Chain X: H.214, H.268
- Ligands: BCT.94
4 PLIP interactions:2 interactions with chain U, 2 interactions with chain X- Metal complexes: U:H.215, U:H.272, X:H.214, X:H.268
- 9 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.3: 22 residues within 4Å:- Chain A: L.200, G.204, F.265, N.267, S.270, F.273, F.274, A.277, W.278, V.281, G.282
- Chain C: Q.16, A.22, W.23, W.24
- Chain D: F.232, R.233
- Chain J: A.34, F.37
- Ligands: LHG.17, CLA.55, DGD.64
14 PLIP interactions:7 interactions with chain A, 2 interactions with chain J, 2 interactions with chain D, 3 interactions with chain C- Hydrophobic interactions: A:F.265, A:F.273, A:A.277, A:W.278, A:V.281, J:A.34, J:F.37, C:W.23, C:W.24
- Hydrogen bonds: A:N.267, A:S.270, C:Q.16
- Water bridges: D:F.232
- Salt bridges: D:R.233
SQD.19: 9 residues within 4Å:- Chain A: L.102, D.103, L.106
- Chain V: W.75, G.89, E.94, L.98
- Ligands: BCR.10, SQD.82
8 PLIP interactions:7 interactions with chain V, 1 interactions with chain A- Hydrophobic interactions: V:W.75, V:W.75, V:W.75, V:W.75, V:W.75, V:E.94, V:L.98, A:L.102
SQD.46: 15 residues within 4Å:- Chain 4: R.14, Y.18
- Chain 5: Y.26
- Chain 7: C.12, L.16, F.19, F.23
- Chain B: R.18, W.115
- Chain K: R.7
- Ligands: CLA.34, BCR.37, BCR.38, BCR.47, UNL.169
10 PLIP interactions:3 interactions with chain 4, 1 interactions with chain B, 5 interactions with chain 7, 1 interactions with chain K- Hydrogen bonds: 4:R.14, 4:R.14
- Salt bridges: 4:R.14, B:R.18, K:R.7
- Hydrophobic interactions: 7:L.16, 7:F.19, 7:F.19, 7:F.19, 7:F.19
SQD.76: 11 residues within 4Å:- Chain B: A.228, R.230, K.498
- Chain D: D.19, K.23, W.32, L.127, R.134, L.135
- Ligands: CLA.28, CLA.29
5 PLIP interactions:2 interactions with chain B, 3 interactions with chain D- Salt bridges: B:R.230, B:K.498, D:K.23, D:K.23
- Hydrophobic interactions: D:L.127
SQD.77: 14 residues within 4Å:- Chain D: R.24, R.26
- Chain E: E.7
- Chain F: F.16, T.17, V.18
- Chain R: T.24, V.27, I.31, D.35
- Chain T: Q.30, L.34
- Ligands: PL9.11, CLA.71
9 PLIP interactions:1 interactions with chain T, 2 interactions with chain D, 4 interactions with chain R, 1 interactions with chain E, 1 interactions with chain F- Hydrogen bonds: T:Q.30, D:R.24, R:D.35, E:E.7, F:V.18
- Salt bridges: D:R.26
- Hydrophobic interactions: R:V.27, R:I.31, R:I.31
SQD.82: 8 residues within 4Å:- Chain A: L.102
- Chain H: M.1, T.3, L.4, F.15
- Ligands: CLA.9, BCR.10, SQD.19
5 PLIP interactions:4 interactions with chain H, 1 interactions with chain A- Hydrophobic interactions: H:T.3, H:L.4, H:F.15, A:L.102
- Hydrogen bonds: H:L.4
SQD.105: 14 residues within 4Å:- Chain 4: R.7
- Chain K: R.14, L.17, Y.18
- Chain L: Y.26
- Chain N: C.12, F.19, F.23
- Chain V: R.18, L.29
- Ligands: UNL.85, BCR.87, CLA.121, BCR.124
8 PLIP interactions:1 interactions with chain 4, 2 interactions with chain V, 4 interactions with chain K, 1 interactions with chain N- Salt bridges: 4:R.7, V:R.18, K:R.14, K:R.14
- Hydrophobic interactions: V:L.29, K:L.17, N:F.19
- Hydrogen bonds: K:R.14
SQD.130: 16 residues within 4Å:- Chain 3: A.34, F.37
- Chain U: L.200, N.267, S.270, F.273, F.274, W.278, V.281
- Chain W: Q.16, W.24
- Chain X: F.232, R.233
- Ligands: LHG.103, DGD.149, BCR.173
11 PLIP interactions:5 interactions with chain U, 3 interactions with chain W, 1 interactions with chain X, 2 interactions with chain 3- Hydrophobic interactions: U:L.200, U:F.274, U:V.281, W:W.24, 3:A.34, 3:F.37
- Hydrogen bonds: U:N.267, U:S.270, W:Q.16, W:Q.16
- Salt bridges: X:R.233
SQD.162: 14 residues within 4Å:- Chain X: R.24, R.26
- Chain Y: E.7
- Chain Z: F.16, T.17, V.18, V.21
- Ligands: PL9.100, CLA.155
- Chain b: I.31, D.35
- Chain d: Q.30, V.31, L.34
9 PLIP interactions:2 interactions with chain X, 2 interactions with chain d, 2 interactions with chain Z, 2 interactions with chain Y, 1 interactions with chain b- Hydrogen bonds: X:R.24, d:Q.30, Z:V.18, Y:E.7, Y:E.7
- Salt bridges: X:R.26
- Hydrophobic interactions: d:V.31, Z:V.21, b:I.31
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.4: 4 residues within 4Å:- Chain A: N.181, H.332, E.333
- Chain D: K.317
Ligand excluded by PLIPCL.5: 4 residues within 4Å:- Chain A: H.337, N.338, F.339
- Chain C: E.342
Ligand excluded by PLIPCL.92: 5 residues within 4Å:- Chain U: N.181, H.332, E.333
- Chain X: K.317, L.321
Ligand excluded by PLIPCL.93: 4 residues within 4Å:- Chain U: H.337, N.338, F.339
- Chain W: E.342
Ligand excluded by PLIP- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.6: 29 residues within 4Å:- Chain A: F.119, Y.147, P.150, S.153, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, F.206, V.283, T.286, A.287, I.290
- Chain D: L.182, L.205, F.257
- Chain N: F.17
- Ligands: CLA.7, PHO.8, CLA.15, CLA.70, LHG.74
16 PLIP interactions:12 interactions with chain A, 3 interactions with chain D, 1 interactions with chain N,- Hydrophobic interactions: A:F.119, A:F.119, A:P.150, A:F.186, A:Q.187, A:I.192, A:L.193, A:V.202, A:F.206, A:F.206, A:T.286, D:L.182, D:L.205, D:F.257, N:F.17
- Metal complexes: A:H.198
CLA.7: 19 residues within 4Å:- Chain A: Q.199, V.202, A.203, F.206, G.207, L.210, W.278
- Chain D: F.157, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.6, PL9.11, DGD.65, PHO.69, CLA.70, LMG.73
11 PLIP interactions:4 interactions with chain A, 6 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: A:V.202, A:F.206, A:W.278, D:F.157, D:I.178, D:F.179, D:F.181, D:L.182, D:L.182
- pi-Stacking: A:F.206
- Metal complexes: H2O.1
CLA.9: 25 residues within 4Å:- Chain A: I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, Q.113, L.114, F.117, H.118
- Chain H: V.8, Y.9, V.11, V.12, T.13, F.15, V.16
- Ligands: BCR.10, LMG.12, CLA.52, CLA.53, BCR.62, SQD.82
17 PLIP interactions:11 interactions with chain A, 6 interactions with chain H,- Hydrophobic interactions: A:I.36, A:P.39, A:T.40, A:F.93, A:I.96, A:W.97, A:W.97, A:F.117, H:V.11, H:V.12, H:T.13, H:F.15, H:F.15, H:V.16
- Hydrogen bonds: A:I.96
- Salt bridges: A:H.118
- Metal complexes: A:H.118
CLA.15: 23 residues within 4Å:- Chain A: T.45, F.48, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain D: M.198, V.201, A.202, L.205, G.206, L.209
- Chain K: L.30
- Ligands: CLA.6, PHO.8, LMG.13, CLA.70, LHG.74, PL9.75, LHG.84
9 PLIP interactions:6 interactions with chain A, 2 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: A:T.45, A:F.48, A:F.158, A:T.179, A:F.180, A:F.182, D:V.201, D:L.209
- Metal complexes: H2O.1
CLA.21: 10 residues within 4Å:- Chain B: W.185, G.186, P.187, F.190
- Chain G: F.41, I.44, L.55
- Ligands: CLA.22, LMG.41, BCR.80
8 PLIP interactions:3 interactions with chain B, 4 interactions with chain G, 1 Ligand-Water interactions,- Hydrophobic interactions: B:W.185, B:P.187, B:F.190, G:F.41, G:F.41, G:I.44, G:L.55
- Metal complexes: H2O.1
CLA.22: 22 residues within 4Å:- Chain B: G.189, F.190, P.192, G.197, H.201, A.204, A.205, V.208, F.247, F.250, V.251
- Chain D: L.158
- Chain G: F.38, F.41, I.45, L.46, Y.49
- Ligands: CLA.21, CLA.23, CLA.29, BCR.80, DGD.81
14 PLIP interactions:10 interactions with chain B, 3 interactions with chain G, 1 interactions with chain D,- Hydrophobic interactions: B:F.190, B:F.190, B:H.201, B:A.205, B:V.208, B:F.247, B:F.250, B:F.250, B:V.251, G:F.38, G:F.41, D:L.158
- Metal complexes: B:H.201
- pi-Stacking: G:F.41
CLA.23: 24 residues within 4Å:- Chain B: R.68, L.69, A.146, L.149, C.150, F.153, L.158, V.198, H.201, H.202, F.247, A.248, V.251, V.252, T.262
- Chain G: F.38, L.39, L.42
- Ligands: CLA.22, CLA.24, CLA.25, CLA.26, CLA.29, BCR.80
14 PLIP interactions:3 interactions with chain G, 11 interactions with chain B,- Hydrophobic interactions: G:F.38, G:F.38, G:L.42, B:L.149, B:L.149, B:F.153, B:F.153, B:V.198, B:F.247, B:A.248, B:V.251
- Hydrogen bonds: B:R.68
- Salt bridges: B:R.68
- Metal complexes: B:H.202
CLA.24: 23 residues within 4Å:- Chain B: W.33, F.61, F.65, R.68, L.145, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.23, CLA.25, CLA.26, CLA.27, CLA.31, CLA.32, CLA.33, CLA.35
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:W.33, B:F.61, B:F.65, B:F.65, B:L.145, B:V.245, B:A.248, B:A.249, B:V.252, B:F.458, B:F.458, B:F.458, B:F.462, B:F.462
- Salt bridges: B:R.68
- Metal complexes: B:H.455
CLA.25: 24 residues within 4Å:- Chain B: T.27, V.30, A.31, W.33, A.34, V.62, F.65, M.66, R.68, L.69, V.96, H.100, L.103, L.143, A.146, A.205
- Ligands: CLA.23, CLA.24, CLA.26, CLA.29, CLA.30, CLA.32, BCR.39, UNL.43
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:T.27, B:V.30, B:A.31, B:W.33, B:A.34, B:L.69, B:V.96, B:L.103, B:L.143, B:A.146
- Salt bridges: B:R.68
- Metal complexes: B:H.100
CLA.26: 21 residues within 4Å:- Chain B: L.69, G.70, V.71, F.90, W.91, V.96, A.99, H.100, V.102, L.106, G.152, F.153, F.156, H.157, F.162, P.164
- Ligands: CLA.23, CLA.24, CLA.25, BCR.39, UNL.43
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:L.69, B:F.90, B:F.90, B:W.91, B:W.91, B:W.91, B:A.99, B:V.102, B:L.106, B:F.153, B:F.156, B:F.162, B:F.162
- Metal complexes: B:H.157
CLA.27: 23 residues within 4Å:- Chain B: W.33, Y.40, Q.58, G.59, F.61, L.324, T.327, G.328, P.329, W.450, F.451, A.454
- Chain D: T.277, M.281
- Chain K: F.35
- Chain L: F.14
- Ligands: LHG.16, CLA.24, CLA.33, BCR.37, BCR.38, LMG.40, BCR.47
13 PLIP interactions:1 interactions with chain K, 9 interactions with chain B, 1 interactions with chain D, 1 interactions with chain L, 1 Ligand-Water interactions,- Hydrophobic interactions: K:F.35, B:Y.40, B:F.61, B:F.61, B:F.61, B:T.327, B:W.450, B:W.450, D:T.277, L:F.14
- Hydrogen bonds: B:G.328
- pi-Stacking: B:F.61
- Metal complexes: H2O.1
CLA.28: 24 residues within 4Å:- Chain B: L.229, T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, L.474
- Chain D: L.36, F.120, I.123, M.126, L.127, F.130, I.150
- Chain G: L.39, L.43
- Ligands: CLA.29, CLA.30, CLA.71, SQD.76
14 PLIP interactions:2 interactions with chain G, 6 interactions with chain B, 6 interactions with chain D,- Hydrophobic interactions: G:L.39, G:L.43, B:F.246, B:F.247, B:F.463, B:L.474, D:L.36, D:F.120, D:F.120, D:I.123, D:M.126, D:I.150
- Hydrogen bonds: B:S.239
- Metal complexes: B:H.466
CLA.29: 22 residues within 4Å:- Chain B: F.139, V.208, A.212, F.215, H.216, V.219, P.221, P.222, L.229, M.231
- Chain G: T.27, T.28, M.31, F.34, L.42
- Ligands: CLA.22, CLA.23, CLA.25, CLA.28, CLA.30, SQD.76, BCR.80
12 PLIP interactions:3 interactions with chain G, 9 interactions with chain B,- Hydrophobic interactions: G:M.31, G:F.34, G:L.42, B:F.139, B:F.139, B:V.208, B:A.212, B:F.215, B:F.215, B:L.229
- Salt bridges: B:H.216
- Metal complexes: B:H.216
CLA.30: 18 residues within 4Å:- Chain B: L.19, H.23, L.135, M.138, F.139, H.142, L.229, M.231, I.234, T.236, V.237, S.240, S.241
- Ligands: CLA.25, CLA.28, CLA.29, CLA.32, CLA.35
12 PLIP interactions:11 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:L.19, B:L.135, B:M.138, B:F.139, B:F.139, B:H.142, B:L.229, B:M.231, B:I.234, B:T.236, B:V.237
- Metal complexes: H2O.1
CLA.31: 21 residues within 4Å:- Chain B: W.5, Y.6, R.7, V.8, H.9, T.10, L.238, I.242, L.461, F.462, F.464, G.465, W.468, H.469, R.472
- Ligands: LHG.16, CLA.24, CLA.32, CLA.33, CLA.34, LHG.84
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:W.5, B:W.5, B:V.8, B:T.10, B:L.238, B:L.238, B:I.242, B:F.462, B:F.464
- Hydrogen bonds: B:V.8, B:H.9
- Salt bridges: B:H.9, B:R.472
- pi-Stacking: B:W.468
- Metal complexes: B:H.469
CLA.32: 21 residues within 4Å:- Chain B: H.9, L.12, I.13, L.19, A.22, H.23, H.26, T.27, V.30, I.234, V.237, L.238, S.241, V.245
- Ligands: CLA.24, CLA.25, CLA.30, CLA.31, CLA.33, CLA.34, CLA.35
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:H.9, B:L.12, B:I.13, B:L.19, B:A.22, B:H.23, B:H.26, B:V.30, B:I.234, B:V.237, B:L.238, B:L.238, B:V.245
- Hydrogen bonds: B:S.241
- Salt bridges: B:H.23
- Metal complexes: B:H.23
CLA.33: 14 residues within 4Å:- Chain B: H.9, H.26, V.30, W.33, F.462
- Ligands: LHG.16, CLA.24, CLA.27, CLA.31, CLA.32, CLA.34, BCR.37, BCR.38, LMG.40
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:V.30, B:V.30, B:W.33, B:W.33, B:F.462, B:F.462
- Salt bridges: B:H.9
- pi-Cation interactions: B:H.26
- Metal complexes: B:H.26
CLA.34: 21 residues within 4Å:- Chain 7: F.8
- Chain B: L.3, V.8, H.9, L.12, M.25, L.29, W.115
- Chain K: Q.8, V.10
- Chain L: L.13, F.21, L.25
- Ligands: CLA.31, CLA.32, CLA.33, BCR.37, LMG.40, SQD.46, UNL.86, UNL.171
10 PLIP interactions:3 interactions with chain L, 7 interactions with chain B,- Hydrophobic interactions: L:L.13, L:F.21, L:L.25, B:V.8, B:V.8, B:L.12, B:M.25, B:L.29, B:W.115
- Metal complexes: B:H.9
CLA.35: 18 residues within 4Å:- Chain B: I.20, H.23, L.24, T.27, L.133, M.138, I.141, H.142, L.145
- Chain G: L.11, L.14, N.15
- Ligands: CLA.24, CLA.30, CLA.32, CLA.36, BCR.39, UNL.79
9 PLIP interactions:3 interactions with chain G, 6 interactions with chain B,- Hydrophobic interactions: G:L.11, G:L.11, G:L.14, B:I.20, B:L.133, B:I.141, B:I.141, B:L.145
- Metal complexes: B:H.142
CLA.36: 14 residues within 4Å:- Chain B: I.20, L.24, L.107, A.110, W.113, H.114, L.120, L.122, F.123
- Chain G: T.5, L.7, G.8
- Ligands: CLA.35, BCR.39
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:I.20, B:L.24, B:L.107, B:W.113, B:W.113, B:W.113, B:W.113, B:L.120, B:L.122, B:F.123
- Metal complexes: B:H.114
CLA.48: 21 residues within 4Å:- Chain C: T.82, L.83, L.156, G.159, A.160, L.163, W.211, V.221, H.225, I.228, A.266, M.270, I.273, F.277, V.284, Y.285
- Ligands: CLA.49, CLA.50, CLA.53, CLA.54, BCR.62
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:L.156, C:A.160, C:L.163, C:L.163, C:W.211, C:I.228, C:A.266, C:M.270, C:I.273, C:V.284
- Hydrogen bonds: C:Y.285
- Metal complexes: C:H.225
CLA.49: 20 residues within 4Å:- Chain C: W.51, H.79, L.162, K.166, F.170, L.267, M.270, G.271, A.274, Y.285, L.414, H.418, L.421, A.422, F.425
- Ligands: CLA.48, CLA.50, CLA.51, CLA.57, CLA.59
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:W.51, C:K.166, C:K.166, C:F.170, C:A.274, C:L.414, C:L.421, C:F.425
- Hydrogen bonds: C:Y.285
- Salt bridges: C:H.79, C:H.418
- Metal complexes: C:H.418
CLA.50: 18 residues within 4Å:- Chain C: I.48, V.49, A.52, T.56, L.76, H.79, I.80, L.83, V.102, H.106, M.270
- Ligands: CLA.48, CLA.49, CLA.54, CLA.57, CLA.59, CLA.60, UNL.68
6 PLIP interactions:6 interactions with chain C,- Hydrophobic interactions: C:I.48, C:V.49, C:A.52, C:L.83, C:V.102
- Metal complexes: C:H.106
CLA.51: 20 residues within 4Å:- Chain C: W.51, M.55, F.58, Q.72, G.73, I.75, W.413, L.414, S.417, H.418, F.424
- Chain J: P.26, V.30
- Ligands: LHG.17, CLA.49, CLA.55, CLA.57, DGD.64, DGD.65, LMG.66
13 PLIP interactions:11 interactions with chain C, 1 interactions with chain J, 1 Ligand-Water interactions,- Hydrophobic interactions: C:W.51, C:F.58, C:F.58, C:I.75, C:I.75, C:W.413, C:W.413, C:W.413, C:L.414, C:F.424, J:V.30
- Hydrogen bonds: C:S.394
- Metal complexes: H2O.2
CLA.52: 21 residues within 4Å:- Chain A: F.33, L.121, M.127, G.128, W.131
- Chain C: F.252, S.261, Y.262, G.265, L.426, H.429, L.430, A.433, R.437
- Chain H: V.16, F.23
- Ligands: CLA.9, LMG.12, CLA.54, BCR.62, DGD.63
13 PLIP interactions:6 interactions with chain C, 5 interactions with chain A, 2 interactions with chain H,- Hydrophobic interactions: C:Y.262, C:Y.262, C:L.426, C:L.430, A:F.33, A:L.121, A:W.131, A:W.131, A:W.131, H:V.16, H:F.23
- Salt bridges: C:R.437
- Metal complexes: C:H.429
CLA.53: 18 residues within 4Å:- Chain C: L.149, L.153, I.231, G.235, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252
- Ligands: CLA.9, CLA.48, CLA.54, BCR.62, DGD.63
8 PLIP interactions:8 interactions with chain C,- Hydrophobic interactions: C:L.153, C:L.153, C:I.231, C:W.238, C:A.248
- Hydrogen bonds: C:F.245
- Salt bridges: C:H.239
- Metal complexes: C:H.239
CLA.54: 19 residues within 4Å:- Chain C: M.145, T.146, L.149, H.152, L.156, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.48, CLA.50, CLA.52, CLA.53, CLA.56, BCR.62
13 PLIP interactions:12 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:M.145, C:T.146, C:L.149, C:L.156, C:F.252, C:F.252, C:W.254, C:Y.259, C:Y.259, C:Y.262, C:A.266, C:L.267
- Metal complexes: H2O.2
CLA.55: 22 residues within 4Å:- Chain C: F.21, W.24, A.25, G.26, N.27, A.28, L.260, L.264, F.424, F.425, G.428, W.431, H.432
- Chain J: L.33
- Ligands: SQD.3, LHG.17, CLA.51, CLA.56, CLA.57, CLA.58, DGD.64, LMG.66
11 PLIP interactions:10 interactions with chain C, 1 interactions with chain J,- Hydrophobic interactions: C:N.27, C:L.264, C:F.425, C:W.431, J:L.33
- Hydrogen bonds: C:N.27, C:N.27
- Salt bridges: C:H.432, C:R.435
- pi-Stacking: C:W.431
- Metal complexes: C:H.432
CLA.56: 18 residues within 4Å:- Chain C: N.27, L.37, A.40, H.41, H.44, I.148, H.152, G.256, E.257, Y.259, L.260, S.263, L.267
- Ligands: CLA.54, CLA.55, CLA.57, CLA.58, CLA.59
9 PLIP interactions:9 interactions with chain C,- Hydrophobic interactions: C:L.37, C:A.40, C:H.44, C:I.148, C:Y.259
- Hydrogen bonds: C:S.263
- pi-Stacking: C:H.41
- pi-Cation interactions: C:H.41
- Metal complexes: C:H.41
CLA.57: 19 residues within 4Å:- Chain C: N.27, H.44, L.47, I.48, W.51, L.267, L.421, F.424, F.425
- Chain J: P.29, V.30, L.33
- Ligands: LHG.17, CLA.49, CLA.50, CLA.51, CLA.55, CLA.56, CLA.58
12 PLIP interactions:10 interactions with chain C, 2 interactions with chain J,- Hydrophobic interactions: C:L.47, C:I.48, C:W.51, C:L.267, C:L.421, C:F.424, C:F.425, C:F.425, J:P.29, J:V.30
- Hydrogen bonds: C:N.27
- Metal complexes: C:H.44
CLA.58: 32 residues within 4Å:- Chain C: T.12, N.13, R.14, W.23, G.26, N.27, R.29, L.30, L.33, K.36, A.40, H.44, V.118, I.122
- Chain J: F.32, L.33, W.39, Q.40
- Chain Q: I.35, I.36, L.39, N.45, L.46
- Chain S: M.19, V.20, P.24, A.28
- Ligands: CLA.55, CLA.56, CLA.57, BCR.83, BCR.89
18 PLIP interactions:6 interactions with chain C, 3 interactions with chain Q, 5 interactions with chain J, 4 interactions with chain S,- Hydrophobic interactions: C:L.30, C:L.30, C:A.40, C:V.118, Q:I.35, Q:I.36, Q:L.46, J:F.32, J:L.33, J:W.39, S:V.20, S:P.24, S:P.24, S:A.28
- Hydrogen bonds: C:R.29
- Salt bridges: C:R.14
- pi-Stacking: J:W.39, J:W.39
CLA.59: 19 residues within 4Å:- Chain C: L.38, H.41, A.45, F.134, F.135, Y.137, I.148, F.151, H.152, I.154, V.155, L.156, I.158, G.159
- Ligands: CLA.49, CLA.50, CLA.56, CLA.60, BCR.61
14 PLIP interactions:14 interactions with chain C,- Hydrophobic interactions: C:L.38, C:H.41, C:Y.137, C:I.148, C:I.148, C:I.148, C:F.151, C:F.151, C:I.154, C:V.155, C:V.155, C:I.158, C:I.158
- Metal complexes: C:H.152
CLA.60: 14 residues within 4Å:- Chain C: L.38, V.42, V.112, L.113, G.116, Y.119, H.120, P.125, L.128, Y.131, F.135
- Ligands: CLA.50, CLA.59, BCR.61
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:V.42, C:V.42, C:V.112, C:L.113, C:Y.119, C:L.128, C:Y.131, C:F.135, C:F.135, C:F.135
- Hydrogen bonds: C:Y.119
- Salt bridges: C:H.120
- Metal complexes: C:H.120
CLA.70: 27 residues within 4Å:- Chain A: M.183, F.206
- Chain D: L.45, W.48, P.149, V.152, F.153, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, L.279, S.282, A.283, V.286
- Ligands: CLA.6, CLA.7, CLA.15, PHO.69
16 PLIP interactions:15 interactions with chain D, 1 interactions with chain A,- Hydrophobic interactions: D:L.45, D:W.48, D:V.152, D:F.153, D:F.181, D:F.185, D:Q.186, D:W.191, D:T.192, D:V.201, D:V.204, D:L.205, D:L.279, A:F.206
- pi-Stacking: D:W.191
- Metal complexes: D:H.197
CLA.71: 23 residues within 4Å:- Chain D: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, T.112, F.113, L.116, H.117, F.120
- Chain G: L.43
- Chain R: G.13, L.14, G.17, A.18
- Ligands: CLA.28, SQD.77
11 PLIP interactions:10 interactions with chain D, 1 interactions with chain R,- Hydrophobic interactions: D:P.39, D:L.43, D:L.91, D:W.93, D:L.116, D:F.120, R:A.18
- Hydrogen bonds: D:L.92
- Salt bridges: D:H.117
- pi-Stacking: D:F.113
- Metal complexes: D:H.117
CLA.95: 28 residues within 4Å:- Chain 7: F.17
- Chain U: F.119, Y.147, P.150, S.153, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, F.206, V.283, T.286, A.287, I.290
- Chain X: L.182, F.257
- Ligands: CLA.96, PHO.97, CLA.101, CLA.154, LHG.158
14 PLIP interactions:11 interactions with chain U, 1 interactions with chain 7, 2 interactions with chain X,- Hydrophobic interactions: U:F.119, U:F.186, U:Q.187, U:I.192, U:I.192, U:L.193, U:V.202, U:F.206, U:T.286, 7:F.17, X:L.182, X:F.257
- Hydrogen bonds: U:S.153
- Metal complexes: U:H.198
CLA.96: 17 residues within 4Å:- Chain U: Q.199, V.202, A.203, F.206, G.207, L.210, W.278
- Chain X: F.157, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.95, DGD.149, PHO.152, CLA.154
10 PLIP interactions:4 interactions with chain U, 5 interactions with chain X, 1 Ligand-Water interactions,- Hydrophobic interactions: U:V.202, U:F.206, U:W.278, X:F.157, X:I.178, X:F.181, X:L.182, X:L.182
- pi-Stacking: U:F.206
- Metal complexes: H2O.3
CLA.98: 23 residues within 4Å:- Chain 1: V.8, Y.9, V.12, T.13, F.15
- Chain U: I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, Q.113, L.114, F.117, H.118, L.121
- Ligands: BCR.99, LMG.131, CLA.136, CLA.137, BCR.146
13 PLIP interactions:9 interactions with chain U, 4 interactions with chain 1,- Hydrophobic interactions: U:T.40, U:F.93, U:I.96, U:W.97, U:F.117, U:L.121, 1:V.8, 1:V.12, 1:F.15, 1:F.15
- Hydrogen bonds: U:I.96
- Salt bridges: U:H.118
- Metal complexes: U:H.118
CLA.101: 24 residues within 4Å:- Chain 4: L.30
- Chain 7: F.10
- Chain U: T.45, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain X: M.198, V.201, A.202, L.205, G.206, L.209
- Ligands: LMG.45, CLA.95, PHO.97, CLA.154, LHG.158, PL9.159, LHG.168
9 PLIP interactions:2 interactions with chain X, 5 interactions with chain U, 1 interactions with chain 7, 1 Ligand-Water interactions,- Hydrophobic interactions: X:V.201, X:L.209, U:T.45, U:V.157, U:F.158, U:F.180, U:F.182, 7:F.10
- Metal complexes: H2O.3
CLA.108: 10 residues within 4Å:- Chain 0: F.41, I.44, L.55
- Chain V: W.185, G.186, P.187, F.190
- Ligands: CLA.109, LMG.128, BCR.163
7 PLIP interactions:3 interactions with chain V, 3 interactions with chain 0, 1 Ligand-Water interactions,- Hydrophobic interactions: V:W.185, V:P.187, V:F.190, 0:F.41, 0:I.44, 0:L.55
- Metal complexes: H2O.4
CLA.109: 27 residues within 4Å:- Chain 0: F.38, F.41, I.45, L.46, Y.49
- Chain V: G.189, F.190, P.192, G.197, A.200, H.201, A.204, A.205, V.208, F.247, F.250, V.251, T.255
- Chain X: V.154, L.158, L.162
- Ligands: CLA.108, CLA.110, CLA.112, CLA.116, BCR.163, DGD.164
16 PLIP interactions:9 interactions with chain V, 4 interactions with chain 0, 3 interactions with chain X,- Hydrophobic interactions: V:F.190, V:F.190, V:A.200, V:H.201, V:A.205, V:V.208, V:F.250, V:F.250, 0:F.38, 0:F.41, 0:L.46, 0:Y.49, X:V.154, X:L.158, X:L.162
- Metal complexes: V:H.201
CLA.110: 25 residues within 4Å:- Chain 0: F.38, L.42
- Chain V: R.68, L.69, A.146, L.149, C.150, F.153, L.158, V.198, H.201, H.202, F.247, A.248, V.251, V.252, T.262
- Ligands: CLA.109, CLA.111, CLA.112, CLA.113, CLA.115, CLA.116, CLA.117, BCR.163
13 PLIP interactions:11 interactions with chain V, 2 interactions with chain 0,- Hydrophobic interactions: V:L.149, V:L.149, V:F.153, V:F.153, V:V.198, V:F.247, V:A.248, V:V.251, 0:F.38, 0:L.42
- Hydrogen bonds: V:R.68
- Salt bridges: V:R.68
- Metal complexes: V:H.202
CLA.111: 24 residues within 4Å:- Chain V: W.33, F.61, F.65, R.68, L.145, L.148, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.110, CLA.112, CLA.113, CLA.114, CLA.118, CLA.119, CLA.120, CLA.122
16 PLIP interactions:16 interactions with chain V,- Hydrophobic interactions: V:W.33, V:F.61, V:F.65, V:F.65, V:L.148, V:V.245, V:A.248, V:A.249, V:F.451, V:F.458, V:F.458, V:F.462, V:F.462
- Salt bridges: V:R.68
- pi-Stacking: V:H.455
- Metal complexes: V:H.455
CLA.112: 23 residues within 4Å:- Chain V: T.27, V.30, A.31, W.33, A.34, V.62, F.65, M.66, R.68, L.69, V.96, H.100, L.103, L.143, A.146, A.205
- Ligands: CLA.109, CLA.110, CLA.111, CLA.113, CLA.116, CLA.117, CLA.119
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:T.27, V:V.30, V:A.31, V:W.33, V:A.34, V:L.69, V:V.96, V:L.103, V:L.143, V:A.146
- Salt bridges: V:R.68
- Metal complexes: V:H.100
CLA.113: 23 residues within 4Å:- Chain V: L.69, G.70, V.71, F.90, W.91, V.96, A.99, H.100, V.102, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.110, CLA.111, CLA.112, BCR.126
19 PLIP interactions:19 interactions with chain V,- Hydrophobic interactions: V:L.69, V:V.71, V:F.90, V:F.90, V:W.91, V:W.91, V:W.91, V:A.99, V:V.102, V:L.103, V:L.106, V:L.149, V:F.153, V:F.156, V:F.162, V:F.162
- Salt bridges: V:H.100
- pi-Stacking: V:H.157
- Metal complexes: V:H.157
CLA.114: 21 residues within 4Å:- Chain 4: L.27, F.31
- Chain 5: F.14
- Chain V: W.33, Y.40, Q.58, G.59, F.61, L.324, T.327, G.328, W.450, F.451, A.454
- Chain X: M.281
- Ligands: BCR.87, LHG.102, CLA.111, CLA.120, BCR.125, LMG.127
12 PLIP interactions:8 interactions with chain V, 2 interactions with chain 4, 1 interactions with chain 5, 1 Ligand-Water interactions,- Hydrophobic interactions: V:F.61, V:F.61, V:F.61, V:T.327, V:W.450, 4:L.27, 4:F.31, 5:F.14
- Hydrogen bonds: V:Y.40, V:G.328
- pi-Stacking: V:F.61
- Metal complexes: H2O.4
CLA.115: 26 residues within 4Å:- Chain 0: L.43, L.46
- Chain V: L.229, T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, T.473, L.474
- Chain X: F.120, I.123, M.126, L.127, F.130, I.150
- Ligands: CLA.110, CLA.116, CLA.117, LMG.129, CLA.155, DGD.164
15 PLIP interactions:7 interactions with chain V, 6 interactions with chain X, 2 interactions with chain 0,- Hydrophobic interactions: V:A.243, V:F.246, V:F.247, V:F.463, V:L.474, X:F.120, X:F.120, X:I.123, X:M.126, X:F.130, X:I.150, 0:L.43, 0:L.46
- Hydrogen bonds: V:S.239
- Metal complexes: V:H.466
CLA.116: 24 residues within 4Å:- Chain 0: T.27, T.28, M.31, F.34, M.35, L.42
- Chain V: F.139, L.143, V.208, A.212, F.215, H.216, V.219, P.221, P.222, L.225, L.229
- Ligands: CLA.109, CLA.110, CLA.112, CLA.115, CLA.117, LMG.129, BCR.163
14 PLIP interactions:4 interactions with chain 0, 10 interactions with chain V,- Hydrophobic interactions: 0:M.31, 0:F.34, 0:L.42, V:F.139, V:F.139, V:L.143, V:V.208, V:A.212, V:F.215, V:F.215, V:L.225
- Hydrogen bonds: 0:T.27
- Salt bridges: V:H.216
- Metal complexes: V:H.216
CLA.117: 17 residues within 4Å:- Chain V: L.135, M.138, F.139, H.142, L.143, A.146, M.231, T.236, V.237, S.240, S.241
- Ligands: CLA.110, CLA.112, CLA.115, CLA.116, CLA.119, CLA.122
8 PLIP interactions:7 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: V:M.138, V:F.139, V:F.139, V:H.142, V:M.231, V:T.236, V:V.237
- Metal complexes: H2O.4
CLA.118: 25 residues within 4Å:- Chain 5: F.21
- Chain V: W.5, Y.6, R.7, V.8, H.9, T.10, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472, F.479
- Ligands: LHG.102, CLA.111, CLA.119, CLA.120, CLA.121, BCR.125, LHG.168
20 PLIP interactions:19 interactions with chain V, 1 interactions with chain 5,- Hydrophobic interactions: V:W.5, V:W.5, V:T.10, V:L.238, V:L.238, V:I.242, V:I.242, V:F.458, V:F.462, V:F.464, V:W.468, 5:F.21
- Hydrogen bonds: V:V.8, V:H.9
- Salt bridges: V:H.9, V:H.469, V:R.472
- pi-Stacking: V:W.468, V:H.469
- Metal complexes: V:H.469
CLA.119: 22 residues within 4Å:- Chain V: H.9, L.12, I.13, L.19, A.22, H.23, H.26, T.27, V.30, I.234, V.237, L.238, S.241, I.242, V.245
- Ligands: CLA.111, CLA.112, CLA.117, CLA.118, CLA.120, CLA.121, CLA.122
15 PLIP interactions:15 interactions with chain V,- Hydrophobic interactions: V:L.12, V:L.12, V:I.13, V:L.19, V:A.22, V:H.26, V:V.30, V:I.234, V:V.237, V:L.238, V:L.238, V:V.245
- Hydrogen bonds: V:S.241
- Salt bridges: V:H.23
- Metal complexes: V:H.23
CLA.120: 15 residues within 4Å:- Chain 5: F.14
- Chain V: H.9, H.26, V.30, W.33, F.462
- Ligands: LHG.102, CLA.111, CLA.114, CLA.118, CLA.119, CLA.121, BCR.124, BCR.125, LMG.127
9 PLIP interactions:8 interactions with chain V, 1 interactions with chain 5,- Hydrophobic interactions: V:V.30, V:V.30, V:W.33, V:W.33, V:F.462, V:F.462, 5:F.14
- Salt bridges: V:H.9
- Metal complexes: V:H.26
CLA.121: 21 residues within 4Å:- Chain 4: Q.8, V.10
- Chain 5: L.13, F.21, L.25
- Chain N: F.8
- Chain V: V.8, H.9, V.11, L.12, M.25, L.29, W.115
- Ligands: UNL.85, SQD.105, CLA.118, CLA.119, CLA.120, BCR.124, LMG.127, UNL.170
11 PLIP interactions:7 interactions with chain V, 1 interactions with chain N, 3 interactions with chain 5,- Hydrophobic interactions: V:V.8, V:V.8, V:L.12, V:M.25, V:L.29, V:W.115, N:F.8, 5:L.13, 5:F.21, 5:L.25
- Metal complexes: V:H.9
CLA.122: 18 residues within 4Å:- Chain 0: L.7, L.11, L.14, N.15
- Chain V: I.20, H.23, L.24, T.27, L.133, M.138, I.141, H.142, L.145
- Ligands: CLA.111, CLA.117, CLA.119, CLA.123, BCR.126
10 PLIP interactions:5 interactions with chain 0, 5 interactions with chain V,- Hydrophobic interactions: 0:L.7, 0:L.11, 0:L.11, 0:L.14, 0:N.15, V:I.20, V:L.133, V:I.141, V:L.145
- Metal complexes: V:H.142
CLA.123: 13 residues within 4Å:- Chain 0: T.5, L.7, G.8
- Chain V: I.20, L.24, A.110, W.113, H.114, L.120, L.122, F.123
- Ligands: CLA.122, BCR.126
10 PLIP interactions:10 interactions with chain V,- Hydrophobic interactions: V:I.20, V:L.24, V:W.113, V:W.113, V:W.113, V:W.113, V:L.120, V:L.122, V:F.123
- Metal complexes: V:H.114
CLA.132: 20 residues within 4Å:- Chain W: T.82, L.83, L.156, G.159, A.160, L.163, L.173, V.221, H.225, I.228, M.270, I.273, F.277, V.284, Y.285
- Ligands: CLA.133, CLA.134, CLA.137, CLA.138, BCR.146
6 PLIP interactions:6 interactions with chain W,- Hydrophobic interactions: W:L.163, W:I.228, W:I.273, W:F.277, W:V.284
- Metal complexes: W:H.225
CLA.133: 21 residues within 4Å:- Chain W: W.51, H.79, L.83, W.85, L.162, K.166, F.170, L.267, M.270, A.274, V.278, Y.285, L.414, H.418, L.421, F.425
- Ligands: CLA.132, CLA.134, CLA.135, CLA.141, CLA.143
16 PLIP interactions:16 interactions with chain W,- Hydrophobic interactions: W:W.51, W:L.83, W:W.85, W:W.85, W:K.166, W:F.170, W:L.267, W:M.270, W:A.274, W:L.414, W:L.421, W:F.425
- Hydrogen bonds: W:Y.285
- Salt bridges: W:H.79, W:H.418
- Metal complexes: W:H.418
CLA.134: 17 residues within 4Å:- Chain W: I.48, V.49, A.52, T.56, L.76, H.79, I.80, V.102, H.106, M.270
- Ligands: CLA.132, CLA.133, CLA.138, CLA.140, CLA.141, CLA.143, CLA.144
5 PLIP interactions:5 interactions with chain W,- Hydrophobic interactions: W:I.48, W:V.49, W:A.52, W:V.102
- Metal complexes: W:H.106
CLA.135: 19 residues within 4Å:- Chain 3: P.26, V.30
- Chain W: W.51, M.55, F.58, Q.72, G.73, I.75, W.413, L.414, S.417, H.418, F.424
- Ligands: CLA.133, CLA.139, CLA.141, DGD.148, DGD.149, LMG.150
9 PLIP interactions:7 interactions with chain W, 1 interactions with chain 3, 1 Ligand-Water interactions,- Hydrophobic interactions: W:W.51, W:F.58, W:I.75, W:W.413, W:W.413, W:W.413, W:L.414, 3:V.30
- Metal complexes: H2O.4
CLA.136: 20 residues within 4Å:- Chain 1: V.12, V.16, F.23
- Chain U: F.33, M.127, G.128, W.131
- Chain W: F.252, S.261, Y.262, G.265, A.266, H.429, L.430, A.433, R.437
- Ligands: CLA.98, LMG.131, CLA.138, BCR.146
11 PLIP interactions:2 interactions with chain 1, 5 interactions with chain U, 4 interactions with chain W,- Hydrophobic interactions: 1:V.12, 1:F.23, U:F.33, U:F.33, U:W.131, U:W.131, U:W.131, W:Y.262, W:Y.262
- Salt bridges: W:R.437
- Metal complexes: W:H.429
CLA.137: 19 residues within 4Å:- Chain W: L.149, L.153, L.201, I.231, G.235, W.238, H.239, T.243, P.244, F.245, W.247, A.248, F.252, M.269
- Ligands: CLA.98, CLA.132, CLA.138, BCR.146, DGD.147
12 PLIP interactions:12 interactions with chain W,- Hydrophobic interactions: W:L.149, W:L.153, W:L.153, W:L.201, W:I.231, W:W.238, W:W.247, W:W.247, W:F.252
- Hydrogen bonds: W:F.245
- pi-Stacking: W:W.238
- Metal complexes: W:H.239
CLA.138: 21 residues within 4Å:- Chain W: M.145, T.146, L.149, H.152, L.153, L.156, W.247, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.132, CLA.134, CLA.136, CLA.137, CLA.140, BCR.146
17 PLIP interactions:16 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: W:M.145, W:T.146, W:L.149, W:L.149, W:L.156, W:W.247, W:F.252, W:F.252, W:W.254, W:Y.259, W:Y.259, W:Y.262, W:Y.262, W:A.266, W:L.267
- Hydrogen bonds: W:H.152
- Metal complexes: H2O.4
CLA.139: 19 residues within 4Å:- Chain W: F.21, W.24, A.25, G.26, N.27, A.28, L.260, L.264, F.424, F.425, G.428, W.431, H.432, R.435
- Ligands: LHG.103, CLA.135, CLA.140, CLA.141, CLA.142
10 PLIP interactions:10 interactions with chain W,- Hydrophobic interactions: W:L.264, W:F.425, W:W.431
- Hydrogen bonds: W:N.27, W:N.27
- Salt bridges: W:H.432, W:R.435
- pi-Stacking: W:W.431
- pi-Cation interactions: W:H.432
- Metal complexes: W:H.432
CLA.140: 20 residues within 4Å:- Chain W: N.27, L.37, A.40, H.41, H.44, W.139, M.145, I.148, H.152, G.256, Y.259, L.260, S.263, L.267
- Ligands: CLA.134, CLA.138, CLA.139, CLA.141, CLA.142, CLA.143
12 PLIP interactions:12 interactions with chain W,- Hydrophobic interactions: W:N.27, W:L.37, W:A.40, W:H.44, W:W.139, W:W.139, W:W.139, W:I.148, W:Y.259, W:L.260
- Hydrogen bonds: W:S.263
- Metal complexes: W:H.41
CLA.141: 18 residues within 4Å:- Chain 3: P.29, V.30, L.33
- Chain W: N.27, H.44, L.47, I.48, W.51, L.267, L.421, F.424, F.425
- Ligands: CLA.133, CLA.134, CLA.135, CLA.139, CLA.140, CLA.142
13 PLIP interactions:10 interactions with chain W, 3 interactions with chain 3,- Hydrophobic interactions: W:L.47, W:I.48, W:W.51, W:L.267, W:L.421, W:F.424, W:F.425, W:F.425, 3:P.29, 3:V.30, 3:L.33
- Hydrogen bonds: W:N.27
- Metal complexes: W:H.44
CLA.142: 32 residues within 4Å:- Chain 3: F.32, L.33, A.36, W.39, Q.40
- Chain W: N.13, R.14, W.23, G.26, N.27, R.29, L.30, L.33, K.36, A.40, H.44, V.118, I.122
- Ligands: CLA.139, CLA.140, CLA.141, BCR.167, UNL.174
- Chain a: I.35, I.36, L.39, N.45, L.46
- Chain c: V.20, V.23, P.24, A.28
23 PLIP interactions:4 interactions with chain a, 8 interactions with chain W, 6 interactions with chain 3, 5 interactions with chain c,- Hydrophobic interactions: a:I.35, a:I.36, a:L.39, a:L.46, W:L.30, W:L.30, W:A.40, W:V.118, W:V.118, W:I.122, 3:F.32, 3:L.33, 3:A.36, 3:W.39, c:V.20, c:V.23, c:P.24, c:P.24, c:A.28
- Hydrogen bonds: W:R.29
- Salt bridges: W:R.14
- pi-Stacking: 3:W.39, 3:W.39
CLA.143: 17 residues within 4Å:- Chain W: L.38, H.41, V.42, F.135, I.148, F.151, H.152, I.154, V.155, I.158, G.159, L.162
- Ligands: CLA.133, CLA.134, CLA.140, CLA.144, BCR.145
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:L.38, W:H.41, W:I.148, W:I.148, W:I.148, W:F.151, W:F.151, W:F.151, W:F.151, W:I.154, W:V.155, W:L.162
- Metal complexes: W:H.152
CLA.144: 14 residues within 4Å:- Chain W: L.38, V.42, V.112, L.113, G.116, Y.119, H.120, P.125, L.128, Y.131, F.135
- Ligands: CLA.134, CLA.143, BCR.145
10 PLIP interactions:10 interactions with chain W,- Hydrophobic interactions: W:V.42, W:V.112, W:L.113, W:Y.119, W:L.128, W:F.135, W:F.135, W:F.135
- Salt bridges: W:H.120
- Metal complexes: W:H.120
CLA.154: 25 residues within 4Å:- Chain U: M.183, F.206
- Chain X: L.45, W.48, P.149, V.152, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, S.282, A.283, V.286
- Ligands: CLA.95, CLA.96, CLA.101, PHO.152
14 PLIP interactions:13 interactions with chain X, 1 interactions with chain U,- Hydrophobic interactions: X:L.45, X:W.48, X:P.149, X:V.152, X:F.181, X:F.185, X:Q.186, X:W.191, X:V.201, X:V.204, X:L.205, U:F.206
- pi-Stacking: X:W.191
- Metal complexes: X:H.197
CLA.155: 26 residues within 4Å:- Chain 0: L.39, L.43
- Chain X: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, G.109, T.112, F.113, L.116, H.117
- Ligands: PL9.100, CLA.115, UNL.153, SQD.162
- Chain b: G.13, L.14, G.17, A.18
13 PLIP interactions:9 interactions with chain X, 2 interactions with chain 0, 2 interactions with chain b,- Hydrophobic interactions: X:P.39, X:L.43, X:F.113, X:L.116, 0:L.39, 0:L.43, b:L.14, b:L.14
- Hydrogen bonds: X:L.92
- Salt bridges: X:H.117
- pi-Stacking: X:F.113, X:H.117
- Metal complexes: X:H.117
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.8: 27 residues within 4Å:- Chain A: L.41, A.44, T.45, F.48, I.115, F.119, Y.126, Q.130, A.146, Y.147, P.150, L.174, G.175, P.279, V.280, V.283
- Chain D: L.205, A.208, L.209, I.213, W.253, F.257
- Ligands: CLA.6, LMG.13, CLA.15, LHG.74, PL9.75
15 PLIP interactions:14 interactions with chain A, 1 interactions with chain D- Hydrophobic interactions: A:L.41, A:A.44, A:F.48, A:I.115, A:F.119, A:F.119, A:Y.126, A:A.146, A:Y.147, A:Y.147, A:L.174, A:V.283, D:L.205
- Hydrogen bonds: A:Q.130, A:Y.147
PHO.69: 27 residues within 4Å:- Chain A: A.209, L.210, M.214, L.258
- Chain D: A.41, A.44, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, F.146, A.148, P.149, F.153, F.173, G.174, V.175, P.275, L.279
- Ligands: CLA.7, PL9.11, CLA.70
22 PLIP interactions:21 interactions with chain D, 1 interactions with chain A- Hydrophobic interactions: D:A.41, D:A.44, D:L.45, D:W.48, D:W.48, D:W.48, D:W.48, D:I.114, D:L.122, D:F.125, D:F.125, D:F.146, D:A.148, D:P.149, D:F.153, D:F.173, D:V.175, D:L.279, A:L.210
- Hydrogen bonds: D:Q.129, D:N.142
- pi-Stacking: D:F.146
PHO.97: 27 residues within 4Å:- Chain U: L.41, A.44, T.45, F.48, I.115, F.119, Y.126, Q.130, A.146, Y.147, A.149, P.150, F.158, L.174, G.175, P.279, V.283
- Chain X: L.205, A.208, L.209, I.213, W.253, F.257
- Ligands: LMG.45, CLA.95, CLA.101, PL9.159
17 PLIP interactions:16 interactions with chain U, 1 interactions with chain X- Hydrophobic interactions: U:L.41, U:A.44, U:F.48, U:F.48, U:F.48, U:I.115, U:F.119, U:Y.126, U:A.146, U:A.149, U:P.150, U:F.158, U:L.174, U:V.283, X:L.205
- Hydrogen bonds: U:Y.126, U:Q.130
PHO.152: 28 residues within 4Å:- Chain U: F.206, A.209, L.210, M.214, F.255, L.258
- Chain X: A.41, A.44, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, P.149, F.153, F.173, G.174, V.175, P.275, L.279
- Ligands: CLA.96, PL9.100, CLA.154
17 PLIP interactions:16 interactions with chain X, 1 interactions with chain U- Hydrophobic interactions: X:A.41, X:W.48, X:W.48, X:I.114, X:L.122, X:F.125, X:A.145, X:F.146, X:P.149, X:F.153, X:F.173, X:P.275, X:L.279, U:F.206
- Hydrogen bonds: X:Q.129, X:N.142
- pi-Stacking: X:F.146
- 22 x BCR: BETA-CAROTENE(Non-covalent)
BCR.10: 13 residues within 4Å:- Chain A: V.35, I.38, L.42, A.43, I.46, I.50, A.51, A.54, W.105
- Chain H: F.15
- Ligands: CLA.9, SQD.19, SQD.82
Ligand excluded by PLIPBCR.37: 13 residues within 4Å:- Chain 7: F.19
- Chain B: M.25, L.29, W.115
- Chain L: A.10, L.13
- Ligands: CLA.27, CLA.33, CLA.34, BCR.38, LMG.40, SQD.46, BCR.47
Ligand excluded by PLIPBCR.38: 16 residues within 4Å:- Chain B: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105, L.109
- Ligands: CLA.27, CLA.33, BCR.37, LMG.40, LMG.45, SQD.46, BCR.47
Ligand excluded by PLIPBCR.39: 14 residues within 4Å:- Chain 7: F.18
- Chain B: L.103, L.106, L.107, L.109, A.110, C.112, W.113
- Ligands: CLA.25, CLA.26, CLA.35, CLA.36, UNL.43, LMG.45
Ligand excluded by PLIPBCR.47: 16 residues within 4Å:- Chain 7: F.8, A.11, I.14, A.15, F.17, F.18, F.22
- Chain B: W.33, S.36, M.37
- Ligands: CLA.27, BCR.37, BCR.38, LMG.45, SQD.46, LHG.158
Ligand excluded by PLIPBCR.61: 13 residues within 4Å:- Chain C: F.100, V.104, V.105, I.108, S.109, V.112, L.113
- Chain S: V.51, L.52, G.55, N.58
- Ligands: CLA.59, CLA.60
Ligand excluded by PLIPBCR.62: 17 residues within 4Å:- Chain C: I.197, Y.200, L.201, I.212, D.220, V.221, G.224, H.225, I.228, F.252
- Chain H: F.23, L.24
- Ligands: CLA.9, CLA.48, CLA.52, CLA.53, CLA.54
Ligand excluded by PLIPBCR.72: 14 residues within 4Å:- Chain D: Y.42, L.43, G.46, G.47, L.49, T.50, F.101
- Chain F: P.29, T.30, F.33, L.34
- Chain I: V.21, V.25
- Ligands: LMG.73
Ligand excluded by PLIPBCR.80: 11 residues within 4Å:- Chain G: F.34, L.37, F.38, V.40, F.41, I.44, L.55
- Ligands: CLA.21, CLA.22, CLA.23, CLA.29
Ligand excluded by PLIPBCR.83: 15 residues within 4Å:- Chain C: A.43, G.46, L.47, F.50, I.108, S.110, A.111, G.114
- Chain J: F.18, F.32
- Chain S: L.12, V.13, S.16
- Ligands: CLA.58, BCR.89
Ligand excluded by PLIPBCR.87: 18 residues within 4Å:- Chain A: L.28
- Chain N: I.4, F.8, A.11, I.14, A.15, F.17, F.18, F.22
- Chain V: W.33, S.36, M.37, F.108
- Ligands: LMG.13, SQD.105, CLA.114, BCR.124, BCR.125
Ligand excluded by PLIPBCR.89: 24 residues within 4Å:- Chain C: F.50
- Chain I: A.14, T.15, G.18, M.19
- Chain J: L.25, I.28, L.31, F.32, A.34, L.35, F.37, V.38, A.41
- Chain Q: I.28, G.29, G.32, P.33
- Chain S: V.13, S.16, F.17, V.20
- Ligands: CLA.58, BCR.83
Ligand excluded by PLIPBCR.99: 15 residues within 4Å:- Chain 1: F.15
- Chain U: V.35, L.42, A.43, I.46, C.47, I.50, A.51, A.54, L.102, W.105, L.106
- Ligands: UNL.44, CLA.98, UNL.165
Ligand excluded by PLIPBCR.124: 14 residues within 4Å:- Chain 5: A.10, L.13
- Chain V: M.25, L.29, F.108, A.111, C.112, W.115
- Ligands: BCR.87, SQD.105, CLA.120, CLA.121, BCR.125, LMG.127
Ligand excluded by PLIPBCR.125: 14 residues within 4Å:- Chain V: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105, L.109
- Ligands: BCR.87, CLA.114, CLA.118, CLA.120, BCR.124
Ligand excluded by PLIPBCR.126: 14 residues within 4Å:- Chain N: F.18, F.22
- Chain V: L.103, L.106, L.107, L.109, A.110, C.112, W.113, V.116
- Ligands: LMG.13, CLA.113, CLA.122, CLA.123
Ligand excluded by PLIPBCR.145: 14 residues within 4Å:- Chain 3: Y.15
- Chain W: F.100, V.101, V.104, I.108, S.109, V.112, L.113
- Ligands: CLA.143, CLA.144
- Chain c: V.51, V.54, G.55, N.58
Ligand excluded by PLIPBCR.146: 18 residues within 4Å:- Chain 1: V.20, F.23, L.24
- Chain W: I.197, Y.200, L.201, I.212, D.220, V.221, G.224, H.225, I.228, F.252
- Ligands: CLA.98, CLA.132, CLA.136, CLA.137, CLA.138
Ligand excluded by PLIPBCR.156: 14 residues within 4Å:- Chain 2: V.21, V.25
- Chain X: Y.42, L.43, G.46, G.47, L.49, T.50, F.101
- Chain Z: P.29, T.30, F.33, L.34
- Ligands: LMG.157
Ligand excluded by PLIPBCR.163: 16 residues within 4Å:- Chain 0: F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Ligands: CLA.108, CLA.109, CLA.110, CLA.116
- Chain b: T.2, I.3, L.7, F.11
Ligand excluded by PLIPBCR.167: 16 residues within 4Å:- Chain 3: F.18, L.21, F.32
- Chain W: A.43, L.47, L.57, I.108, S.110, A.111, G.114, V.118
- Ligands: CLA.142, BCR.173, UNL.174
- Chain c: S.16, V.20
Ligand excluded by PLIPBCR.173: 20 residues within 4Å:- Chain 2: A.14, T.15, G.18, M.19
- Chain 3: L.25, I.28, L.31, A.34, L.35, V.38, A.41
- Chain W: F.50
- Ligands: SQD.130, BCR.167
- Chain a: I.28, G.29, G.32
- Chain c: S.16, F.17, V.20
Ligand excluded by PLIP- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.11: 25 residues within 4Å:- Chain A: F.211, M.214, H.215, L.218, I.248, H.252, F.255, I.259, A.263, S.264, F.265, L.271, F.274, L.275
- Chain D: G.34, F.38, P.39, L.45
- Chain F: A.22, L.26
- Chain R: T.24
- Ligands: CLA.7, LHG.18, PHO.69, SQD.77
20 PLIP interactions:1 interactions with chain R, 3 interactions with chain D, 14 interactions with chain A, 2 interactions with chain F- Hydrophobic interactions: R:T.24, D:F.38, D:P.39, D:L.45, A:F.211, A:F.211, A:M.214, A:L.218, A:I.248, A:F.255, A:F.255, A:I.259, A:F.265, A:L.271, A:L.271, A:F.274, A:L.275, F:A.22, F:L.26
- Hydrogen bonds: A:F.265
PL9.75: 29 residues within 4Å:- Chain A: F.52, I.77, I.176
- Chain D: M.198, M.199, A.202, G.203, L.209, L.210, I.213, H.214, T.217, A.249, W.253, I.259, A.260, F.261, L.267, F.270, V.274
- Chain K: L.23, V.26, L.27, L.29
- Chain N: F.10
- Ligands: PHO.8, CLA.15, LHG.74, LHG.84
25 PLIP interactions:3 interactions with chain K, 4 interactions with chain N, 13 interactions with chain D, 5 interactions with chain A- Hydrophobic interactions: K:L.23, K:L.27, K:L.29, N:F.10, N:F.10, N:F.10, N:F.10, D:M.199, D:A.202, D:L.209, D:T.217, D:A.249, D:W.253, D:F.261, D:F.261, D:L.267, D:F.270, D:V.274, A:F.52, A:F.52, A:F.52, A:I.77, A:I.176
- Hydrogen bonds: D:T.217, D:F.261
PL9.100: 26 residues within 4Å:- Chain U: F.211, H.215, L.218, V.219, I.248, A.251, H.252, F.255, I.259, A.263, S.264, F.265, L.271, L.275
- Chain X: V.30, F.38, P.39, L.45
- Chain Z: A.22, T.25, L.26
- Ligands: LHG.104, PHO.152, CLA.155, SQD.162
- Chain b: T.24
19 PLIP interactions:13 interactions with chain U, 1 interactions with chain Z, 5 interactions with chain X- Hydrophobic interactions: U:F.211, U:F.211, U:L.218, U:V.219, U:A.251, U:F.255, U:F.255, U:F.255, U:I.259, U:L.271, U:L.271, U:L.275, Z:L.26, X:V.30, X:F.38, X:F.38, X:P.39, X:L.45
- Hydrogen bonds: U:F.265
PL9.159: 31 residues within 4Å:- Chain 4: L.23, V.26, L.27, L.29
- Chain 7: F.10
- Chain U: V.49, F.52, I.53, I.77
- Chain X: M.198, M.199, A.202, G.203, L.209, L.210, I.213, H.214, T.217, W.253, F.257, I.259, A.260, F.261, L.267, F.273, V.274, G.278
- Ligands: PHO.97, CLA.101, LHG.158, LHG.168
22 PLIP interactions:2 interactions with chain 7, 5 interactions with chain U, 13 interactions with chain X, 2 interactions with chain 4- Hydrophobic interactions: 7:F.10, 7:F.10, U:V.49, U:F.52, U:F.52, U:I.53, U:I.77, X:M.199, X:L.209, X:T.217, X:W.253, X:F.257, X:F.261, X:F.261, X:F.261, X:L.267, X:F.273, X:V.274, 4:L.23, 4:L.29
- Hydrogen bonds: X:H.214, X:F.261
- 16 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.12: 19 residues within 4Å:- Chain A: F.93, W.97, E.98, F.117, L.120, L.121, F.155
- Chain C: L.201, L.202, K.203, P.205, F.206, W.211, M.269
- Chain H: K.5, Y.9
- Ligands: CLA.9, CLA.52, DGD.63
Ligand excluded by PLIPLMG.13: 15 residues within 4Å:- Chain A: W.20, N.26, R.27, L.28, L.42, T.45
- Chain N: F.22
- Chain V: L.109, W.113, Y.117
- Ligands: PHO.8, CLA.15, LHG.74, BCR.87, BCR.126
Ligand excluded by PLIPLMG.40: 18 residues within 4Å:- Chain B: Y.40, T.327, G.328, P.329, K.332, F.453
- Chain D: I.284
- Chain K: F.35
- Chain L: N.4, Q.5, L.13, V.17
- Ligands: CLA.27, CLA.33, CLA.34, BCR.37, BCR.38, LHG.84
Ligand excluded by PLIPLMG.41: 7 residues within 4Å:- Chain B: P.183, E.184, W.185, G.186, I.207
- Chain G: F.34
- Ligands: CLA.21
Ligand excluded by PLIPLMG.45: 16 residues within 4Å:- Chain 7: F.22
- Chain B: L.109, W.113, Y.117
- Chain U: N.26, L.28, I.38, L.41, L.42, T.45
- Ligands: BCR.38, BCR.39, BCR.47, PHO.97, CLA.101, LHG.158
Ligand excluded by PLIPLMG.66: 11 residues within 4Å:- Chain C: F.58, H.62, Q.72
- Chain I: I.22
- Chain J: V.27, L.31
- Chain Q: Q.21, I.25
- Ligands: CLA.51, CLA.55, DGD.64
Ligand excluded by PLIPLMG.67: 3 residues within 4Å:- Chain C: L.192, D.193, P.194
Ligand excluded by PLIPLMG.73: 16 residues within 4Å:- Chain D: Y.67, G.70, C.71, N.72, F.73
- Chain F: T.30, I.37, M.40, Q.41
- Chain I: F.28, G.31, A.32, L.36
- Ligands: CLA.7, DGD.65, BCR.72
Ligand excluded by PLIPLMG.127: 18 residues within 4Å:- Chain 4: F.35
- Chain 5: N.4, A.10, L.13
- Chain V: Y.40, T.327, G.328, P.329, K.332, F.453, V.457
- Chain X: I.284
- Ligands: LHG.102, CLA.114, CLA.120, CLA.121, BCR.124, LHG.168
Ligand excluded by PLIPLMG.128: 6 residues within 4Å:- Chain V: P.183, E.184, W.185, G.186, A.204
- Ligands: CLA.108
Ligand excluded by PLIPLMG.129: 4 residues within 4Å:- Chain V: A.228
- Ligands: CLA.115, CLA.116, LMG.160
Ligand excluded by PLIPLMG.131: 20 residues within 4Å:- Chain 1: K.5, Y.9
- Chain U: F.93, W.97, E.98, F.117, L.120, F.155
- Chain W: L.201, L.202, K.203, S.204, P.205, F.206, W.211, M.269, F.272
- Ligands: CLA.98, CLA.136, DGD.147
Ligand excluded by PLIPLMG.150: 11 residues within 4Å:- Chain 2: I.22
- Chain 3: D.23, V.27, V.30
- Chain W: F.58, H.62
- Ligands: CLA.135, DGD.148, UNL.166
- Chain a: Q.21, I.25
Ligand excluded by PLIPLMG.151: 6 residues within 4Å:- Chain W: L.192, D.193, P.194, W.227, A.234, W.238
Ligand excluded by PLIPLMG.157: 16 residues within 4Å:- Chain 2: F.28, G.31, A.32, L.36
- Chain X: Y.67, G.70, C.71, N.72, F.73
- Chain Z: L.26, T.30, I.37, M.40, Q.41
- Ligands: DGD.149, BCR.156
Ligand excluded by PLIPLMG.160: 9 residues within 4Å:- Chain X: F.15, D.19, K.23, W.32, S.33, L.127, E.131, R.134
- Ligands: LMG.129
Ligand excluded by PLIP- 17 x UNL: UNKNOWN LIGAND(Non-functional Binders)
UNL.14: 2 residues within 4Å:- Chain A: R.16, W.20
Ligand excluded by PLIPUNL.42: 2 residues within 4Å:- Chain B: R.224, A.228
Ligand excluded by PLIPUNL.43: 4 residues within 4Å:- Chain B: W.91
- Ligands: CLA.25, CLA.26, BCR.39
Ligand excluded by PLIPUNL.44: 4 residues within 4Å:- Chain B: W.75, F.90
- Ligands: BCR.99, UNL.165
Ligand excluded by PLIPUNL.68: 6 residues within 4Å:- Chain C: P.98, V.101, V.102, V.105, H.106
- Ligands: CLA.50
Ligand excluded by PLIPUNL.79: 3 residues within 4Å:- Chain G: I.10, P.13
- Ligands: CLA.35
Ligand excluded by PLIPUNL.85: 2 residues within 4Å:- Ligands: SQD.105, CLA.121
Ligand excluded by PLIPUNL.86: 5 residues within 4Å:- Chain K: R.7
- Chain L: F.21, I.24
- Ligands: CLA.34, UNL.169
Ligand excluded by PLIPUNL.106: 6 residues within 4Å:- Chain A: L.72
- Chain N: M.1, I.4, V.7
- Chain V: A.43, T.44
Ligand excluded by PLIPUNL.107: 4 residues within 4Å:- Chain 5: L.6
- Chain N: T.5, F.8
- Chain V: Y.40
Ligand excluded by PLIPUNL.153: 7 residues within 4Å:- Chain X: L.92, W.93, Q.98, G.99
- Ligands: CLA.155
- Chain b: P.5, L.21
Ligand excluded by PLIPUNL.165: 2 residues within 4Å:- Ligands: UNL.44, BCR.99
Ligand excluded by PLIPUNL.166: 4 residues within 4Å:- Chain 2: G.26, Y.33
- Ligands: DGD.148, LMG.150
Ligand excluded by PLIPUNL.169: 3 residues within 4Å:- Chain 5: I.23
- Ligands: SQD.46, UNL.86
Ligand excluded by PLIPUNL.170: 4 residues within 4Å:- Chain 5: V.20, F.21, I.24
- Ligands: CLA.121
Ligand excluded by PLIPUNL.171: 5 residues within 4Å:- Chain 7: I.4, T.5, F.8
- Chain L: L.6
- Ligands: CLA.34
Ligand excluded by PLIPUNL.174: 7 residues within 4Å:- Chain W: A.111, F.115
- Ligands: CLA.142, BCR.167
- Chain c: M.19, W.47, I.48
Ligand excluded by PLIP- 10 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.16: 20 residues within 4Å:- Chain A: S.232, N.234
- Chain B: W.5, Y.6, R.7, L.461, F.464, W.468
- Chain D: R.139, Y.141, I.144, W.266, F.269, F.273, V.276
- Chain L: F.14
- Ligands: CLA.27, CLA.31, CLA.33, LHG.84
12 PLIP interactions:4 interactions with chain D, 6 interactions with chain B, 1 interactions with chain A, 1 interactions with chain L- Hydrophobic interactions: D:F.273, D:F.273, D:V.276, B:W.5, B:Y.6, B:L.461, B:F.464, L:F.14
- Hydrogen bonds: D:R.139, B:Y.6, A:N.234
- Salt bridges: B:R.7
LHG.17: 23 residues within 4Å:- Chain A: R.140, W.142, A.146, F.273, A.276, V.281, W.284, F.285
- Chain C: W.24, A.25, W.431, R.435
- Chain D: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.3, CLA.51, CLA.55, CLA.57, DGD.65
14 PLIP interactions:4 interactions with chain D, 4 interactions with chain C, 6 interactions with chain A- Hydrogen bonds: D:N.220, D:A.229, D:S.230, D:T.231, C:R.435, C:R.435
- Hydrophobic interactions: C:W.24, C:W.431, A:A.146, A:F.273, A:V.281, A:W.284, A:F.285
- Salt bridges: A:R.140
LHG.18: 14 residues within 4Å:- Chain A: L.258, Y.262, A.263, S.264, F.265, N.266
- Chain D: F.27, F.38, F.125
- Chain E: P.9, F.10, S.11
- Chain F: V.23
- Ligands: PL9.11
10 PLIP interactions:4 interactions with chain A, 2 interactions with chain D, 1 interactions with chain F, 3 interactions with chain E- Hydrophobic interactions: A:Y.262, A:Y.262, A:F.265, A:F.265, D:F.38, D:F.125, F:V.23, E:F.10, E:F.10
- Hydrogen bonds: E:F.10
LHG.74: 24 residues within 4Å:- Chain D: I.256, F.257, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Chain K: N.13, T.15, S.16, Y.18, L.19, L.22
- Chain N: F.17, A.20, I.21
- Ligands: CLA.6, PHO.8, LMG.13, CLA.15, PL9.75, LHG.84
10 PLIP interactions:4 interactions with chain K, 1 interactions with chain N, 5 interactions with chain D- Hydrophobic interactions: K:Y.18, K:L.22, K:L.22, N:F.17, D:F.261, D:F.270
- Hydrogen bonds: K:N.13, D:S.262, D:S.262, D:N.263
LHG.84: 23 residues within 4Å:- Chain A: S.232, N.234
- Chain B: P.4, W.5, Y.6
- Chain D: W.266, F.269, F.273
- Chain K: E.11, L.12, N.13, S.16, G.20, L.23
- Chain L: P.18, F.21, L.22
- Ligands: CLA.15, LHG.16, CLA.31, LMG.40, LHG.74, PL9.75
14 PLIP interactions:3 interactions with chain A, 2 interactions with chain D, 7 interactions with chain K, 1 interactions with chain L, 1 interactions with chain B- Hydrogen bonds: A:S.232, A:S.232, A:N.234, K:E.11, K:E.11, K:N.13, K:S.16, B:W.5
- Hydrophobic interactions: D:F.269, D:F.273, K:L.23, K:L.23, K:L.23, L:P.18
LHG.102: 23 residues within 4Å:- Chain 5: F.14, P.18
- Chain U: S.232, N.234
- Chain V: Y.6, R.7, L.461, F.464, W.468
- Chain X: R.139, Y.141, I.144, W.266, F.269, F.273, T.277, W.280, M.281
- Ligands: CLA.114, CLA.118, CLA.120, LMG.127, LHG.168
12 PLIP interactions:4 interactions with chain U, 2 interactions with chain X, 4 interactions with chain V, 2 interactions with chain 5- Hydrogen bonds: U:S.232, U:A.233, U:N.234, U:N.234, X:R.139, V:Y.6
- Hydrophobic interactions: X:F.273, V:L.461, V:F.464, 5:F.14, 5:P.18
- Salt bridges: V:R.7
LHG.103: 16 residues within 4Å:- Chain U: R.140, W.142, F.273, A.276
- Chain W: F.21, W.24, W.431, R.435
- Chain X: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.130, CLA.139
9 PLIP interactions:4 interactions with chain W, 2 interactions with chain U, 3 interactions with chain X- Hydrophobic interactions: W:W.24, W:W.24, U:F.273
- Hydrogen bonds: W:R.435, W:R.435, X:N.220, X:A.229, X:T.231
- Salt bridges: U:R.140
LHG.104: 11 residues within 4Å:- Chain U: L.258, I.259, F.260, Y.262, A.263
- Chain X: F.27, V.28
- Chain Y: P.9, F.10, S.11
- Ligands: PL9.100
11 PLIP interactions:4 interactions with chain U, 5 interactions with chain Y, 2 interactions with chain X- Hydrophobic interactions: U:I.259, U:F.260, U:F.260, U:A.263, Y:F.10, Y:F.10, X:F.27, X:V.28
- Hydrogen bonds: Y:F.10, Y:S.11, Y:S.11
LHG.158: 21 residues within 4Å:- Chain 4: N.13, T.15, Y.18, L.19, L.22
- Chain 7: F.17, A.20
- Chain X: F.257, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Ligands: LMG.45, BCR.47, CLA.95, CLA.101, PL9.159, LHG.168
12 PLIP interactions:6 interactions with chain X, 4 interactions with chain 7, 2 interactions with chain 4- Hydrophobic interactions: X:F.257, X:F.261, X:F.270, 7:F.17, 7:F.17, 7:F.17, 7:A.20
- Hydrogen bonds: X:S.262, X:S.262, X:N.263, 4:N.13, 4:T.15
LHG.168: 23 residues within 4Å:- Chain 4: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23, V.26
- Chain 5: F.21
- Chain U: S.232, N.234
- Chain V: P.4, W.5, Y.6
- Chain X: W.266, F.273
- Ligands: CLA.101, LHG.102, CLA.118, LMG.127, LHG.158, PL9.159
15 PLIP interactions:1 interactions with chain 5, 8 interactions with chain 4, 2 interactions with chain X, 3 interactions with chain U, 1 interactions with chain V- Hydrophobic interactions: 5:F.21, 4:L.22, 4:L.23, 4:V.26, 4:V.26, X:W.266, X:F.273
- Hydrogen bonds: 4:E.11, 4:E.11, 4:N.13, 4:S.16, U:S.232, U:S.232, U:N.234, V:W.5
- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.20: 9 residues within 4Å:- Chain A: H.215, E.244, Y.246, H.272
- Chain D: H.214, Y.244, K.264, H.268
- Ligands: FE2.2
3 PLIP interactions:2 interactions with chain D, 1 interactions with chain A- Hydrogen bonds: D:Y.244, D:K.264, A:Y.246
BCT.94: 8 residues within 4Å:- Chain U: H.215, E.244, Y.246, H.272
- Chain X: H.214, Y.244, H.268
- Ligands: FE2.91
1 PLIP interactions:1 interactions with chain X- Hydrogen bonds: X:Y.244
- 8 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.63: 25 residues within 4Å:- Chain A: L.91, A.152, F.155, I.163
- Chain C: P.205, F.206, G.207, G.208, E.209, G.210, W.211, S.214, V.215, F.272, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350
- Ligands: LMG.12, CLA.52, CLA.53
19 PLIP interactions:14 interactions with chain C, 5 interactions with chain A- Hydrophobic interactions: C:P.205, C:F.206, C:F.206, C:W.211, C:F.272, C:F.272, A:A.152, A:F.155, A:F.155, A:F.155, A:I.163
- Hydrogen bonds: C:G.208, C:N.282, C:N.282, C:T.283, C:T.283, C:D.348, C:R.350, C:R.350
DGD.64: 20 residues within 4Å:- Chain A: H.195, F.197, L.297
- Chain C: E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417
- Chain I: Y.33
- Ligands: SQD.3, CLA.51, CLA.55, DGD.65, LMG.66
8 PLIP interactions:6 interactions with chain C, 2 interactions with chain A- Hydrophobic interactions: C:L.392, A:F.197, A:F.197
- Hydrogen bonds: C:S.394, C:N.406, C:N.406, C:V.408, C:V.408
DGD.65: 30 residues within 4Å:- Chain A: P.196, Q.199, L.200, A.203, W.278, F.285, F.300, N.301, F.302, S.305
- Chain C: N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain D: L.74
- Chain I: F.29, A.32, Y.33, G.37, S.38, S.39
- Chain P: Q.60
- Ligands: CLA.7, LHG.17, CLA.51, DGD.64, LMG.73
17 PLIP interactions:8 interactions with chain A, 3 interactions with chain C, 2 interactions with chain D, 1 interactions with chain P, 3 interactions with chain I- Hydrophobic interactions: A:P.196, A:L.200, A:L.200, A:A.203, A:W.278, A:F.285, A:F.300, D:L.74, D:L.74, I:F.29
- Hydrogen bonds: A:S.305, C:N.393, C:S.404, C:V.405, P:Q.60, I:G.37, I:S.39
DGD.81: 24 residues within 4Å:- Chain B: Y.193, F.250, A.253, G.254, Y.258, Y.273, Q.274, S.277, Y.279, T.452, F.463
- Chain D: H.87, I.123, V.154, L.162, G.163, L.291
- Chain G: L.46, Y.49, N.50, V.60, S.61, W.62
- Ligands: CLA.22
22 PLIP interactions:7 interactions with chain B, 8 interactions with chain G, 7 interactions with chain D- Hydrophobic interactions: B:Y.258, B:T.452, B:F.463, G:L.46, G:Y.49, G:Y.49, G:Y.49, D:I.123, D:V.154, D:L.162, D:L.162, D:L.291
- Hydrogen bonds: B:Y.193, B:Y.258, B:Y.273, B:S.277, G:N.50, G:V.60, G:S.61, G:W.62, D:H.87, D:H.87
DGD.147: 27 residues within 4Å:- Chain U: F.155, I.160, I.163
- Chain W: W.177, P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, F.272, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, L.426
- Ligands: LMG.131, CLA.137
24 PLIP interactions:20 interactions with chain W, 4 interactions with chain U- Hydrophobic interactions: W:P.205, W:F.206, W:W.211, W:V.213, W:F.272, W:F.272, W:F.272, W:L.426, U:F.155, U:F.155, U:I.160, U:I.163
- Hydrogen bonds: W:G.208, W:N.282, W:N.282, W:T.283, W:T.283, W:T.283, W:D.348, W:D.348, W:R.350, W:R.350
- Water bridges: W:G.208, W:E.209
DGD.148: 19 residues within 4Å:- Chain 2: F.29, Y.33
- Chain U: F.197, L.297
- Chain W: E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417
- Ligands: CLA.135, DGD.149, LMG.150, UNL.166
9 PLIP interactions:6 interactions with chain W, 1 interactions with chain U, 2 interactions with chain 2- Hydrophobic interactions: W:L.392, U:F.197, 2:F.29, 2:F.29
- Hydrogen bonds: W:S.394, W:N.406, W:N.406, W:V.408, W:V.408
DGD.149: 29 residues within 4Å:- Chain 2: F.29, A.32, Y.33, G.37, S.38, S.39
- Chain 9: Q.60
- Chain U: P.196, Q.199, L.200, A.203, W.278, F.300, N.301, F.302, S.305
- Chain W: N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain X: L.74
- Ligands: CLA.96, SQD.130, CLA.135, DGD.148, LMG.157
16 PLIP interactions:8 interactions with chain U, 2 interactions with chain 2, 1 interactions with chain 9, 4 interactions with chain W, 1 interactions with chain X- Hydrophobic interactions: U:P.196, U:Q.199, U:L.200, U:A.203, U:W.278, U:F.300, U:F.300, X:L.74
- Hydrogen bonds: U:S.305, 2:Y.33, 2:G.37, 9:Q.60, W:N.393, W:N.403, W:S.404, W:V.405
DGD.164: 22 residues within 4Å:- Chain 0: L.46, Y.49, N.50, V.60, S.61, W.62
- Chain V: Y.193, F.250, G.254, Y.258, Y.273, Q.274, S.277, Y.279
- Chain X: G.86, H.87, I.123, L.162, G.163, L.291
- Ligands: CLA.109, CLA.115
14 PLIP interactions:6 interactions with chain 0, 3 interactions with chain V, 5 interactions with chain X- Hydrophobic interactions: 0:Y.49, 0:Y.49, 0:Y.49, V:Y.258, X:I.123, X:L.291
- Hydrogen bonds: 0:N.50, 0:V.60, 0:S.61, V:Y.258, V:S.277, X:H.87, X:H.87
- Salt bridges: X:H.87
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.78: 18 residues within 4Å:- Chain E: F.10, I.13, R.18, Y.19, H.23, T.26, I.27, L.30
- Chain F: I.15, R.19, W.20, H.24, A.27, V.28, I.31
- Chain T: A.15, A.16, A.19
17 PLIP interactions:7 interactions with chain F, 2 interactions with chain T, 8 interactions with chain E,- Hydrophobic interactions: F:I.15, F:W.20, F:A.27, F:V.28, T:A.15, T:A.19, E:F.10, E:I.13, E:I.27, E:L.30
- Salt bridges: F:R.19, E:R.18
- pi-Stacking: F:W.20, F:W.20, E:Y.19
- pi-Cation interactions: E:H.23
- Metal complexes: E:H.23
HEM.161: 17 residues within 4Å:- Chain Y: R.8, F.10, I.13, R.18, Y.19, H.23, T.26, I.27, L.30
- Chain Z: I.15, R.19, W.20, H.24, A.27, V.28, I.31
- Chain d: A.19
17 PLIP interactions:9 interactions with chain Y, 7 interactions with chain Z, 1 interactions with chain d,- Hydrophobic interactions: Y:F.10, Y:I.13, Y:T.26, Y:I.27, Z:I.15, Z:W.20, Z:A.27, Z:V.28, d:A.19
- Salt bridges: Y:R.8, Y:R.18, Z:R.19
- pi-Stacking: Y:Y.19, Z:W.20, Z:W.20
- pi-Cation interactions: Y:H.23
- Metal complexes: Y:H.23
- 2 x HEC: HEME C(Covalent)
HEC.88: 21 residues within 4Å:- Chain P: A.62, C.63, S.65, C.66, H.67, T.72, T.74, L.78, D.79, L.80, T.84, L.85, L.98, Y.101, M.102, Y.108, I.114, H.118, P.119, I.141, I.145
15 PLIP interactions:15 interactions with chain P,- Hydrophobic interactions: P:A.62, P:T.72, P:T.74, P:L.78, P:L.80, P:L.85, P:L.98, P:Y.101, P:P.119, P:I.141, P:I.145
- Hydrogen bonds: P:D.79
- pi-Stacking: P:Y.101
- Metal complexes: P:H.67, P:H.118
HEC.172: 21 residues within 4Å:- Chain 9: A.62, C.63, S.65, C.66, H.67, T.72, T.74, L.78, D.79, L.80, T.84, L.85, A.88, L.98, Y.101, M.102, Y.108, I.114, H.118, I.141, I.145
11 PLIP interactions:11 interactions with chain 9,- Hydrophobic interactions: 9:A.62, 9:T.72, 9:T.74, 9:L.80, 9:L.98, 9:I.114, 9:I.145
- Hydrogen bonds: 9:D.79
- pi-Stacking: 9:Y.101
- Metal complexes: 9:H.67, 9:H.118
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Young, I.D. et al., Structure of photosystem II and substrate binding at room temperature. Nature (2016)
- Release Date
- 2016-11-23
- Peptides
- Photosystem II protein D1 1: AU
Photosystem II CP47 reaction center protein: BV
Photosystem II CP43 reaction center protein: CW
Photosystem II D2 protein: DX
Cytochrome b559 subunit alpha: EY
Cytochrome b559 subunit beta: FZ
Photosystem II reaction center protein H: G0
Photosystem II reaction center protein I: H1
Photosystem II reaction center protein J: I2
Photosystem II reaction center protein K: J3
Photosystem II reaction center protein L: K4
Photosystem II reaction center protein M: L5
Photosystem II manganese-stabilizing polypeptide: M6
Photosystem II reaction center protein T: N7
Photosystem II 12 kDa extrinsic protein: O8
Cytochrome c-550: P9
Photosystem II reaction center protein Ycf12: Qa
Photosystem II reaction center X protein: Rb
Photosystem II reaction center protein Z: Sc
Photosystem II protein Y: Td - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AU
aB
BV
bC
CW
cD
DX
dE
EY
eF
FZ
fG
H0
hH
I1
iI
J2
jJ
K3
kK
L4
lL
M5
mM
O6
oN
T7
tO
U8
uP
V9
vQ
Ya
yR
Xb
xS
Zc
zT
Rd
r - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 5kaf.1
RT XFEL structure of Photosystem II in the dark state at 3.0 A resolution
Photosystem II protein D1 1
Toggle Identical (AU)Photosystem II CP47 reaction center protein
Toggle Identical (BV)Photosystem II CP43 reaction center protein
Toggle Identical (CW)Photosystem II D2 protein
Toggle Identical (DX)Cytochrome b559 subunit alpha
Cytochrome b559 subunit beta
Toggle Identical (FZ)Photosystem II reaction center protein H
Toggle Identical (G0)Photosystem II reaction center protein I
Toggle Identical (H1)Photosystem II reaction center protein J
Toggle Identical (I2)Photosystem II reaction center protein K
Toggle Identical (J3)Photosystem II reaction center protein L
Toggle Identical (K4)Photosystem II reaction center protein M
Toggle Identical (L5)Photosystem II manganese-stabilizing polypeptide
Toggle Identical (M6)Photosystem II reaction center protein T
Toggle Identical (N7)Photosystem II 12 kDa extrinsic protein
Toggle Identical (O8)Cytochrome c-550
Toggle Identical (P9)Photosystem II reaction center protein Ycf12
Toggle Identical (Qa)Photosystem II reaction center X protein
Toggle Identical (Rb)Photosystem II reaction center protein Z
Toggle Identical (Sc)Photosystem II protein Y
Toggle Identical (Td)Related Entries With Identical Sequence
1izl.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1 more...less...5e79.1 | 5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1 | 9evx.1