- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 2 x OEX: CA-MN4-O5 CLUSTER(Covalent)
- 2 x FE2: FE (II) ION(Non-covalent)
FE2.2: 5 residues within 4Å:- Chain A: H.215, H.272
- Chain D: H.214, H.268
- Ligands: BCT.15
4 PLIP interactions:2 interactions with chain D, 2 interactions with chain A- Metal complexes: D:H.214, D:H.268, A:H.215, A:H.272
FE2.89: 5 residues within 4Å:- Chain U: H.215, H.272
- Chain X: H.214, H.268
- Ligands: BCT.92
4 PLIP interactions:2 interactions with chain U, 2 interactions with chain X- Metal complexes: U:H.215, U:H.272, X:H.214, X:H.268
- 16 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)(Non-functional Binders)
LMG.3: 16 residues within 4Å:- Chain A: W.20, N.26, R.27, L.28, I.38, L.42, T.45
- Chain N: F.22
- Chain V: L.109, W.113, Y.117
- Ligands: PHO.8, CLA.64, BCR.108, BCR.130, BCR.131
Ligand excluded by PLIPLMG.36: 6 residues within 4Å:- Chain B: P.183, E.184, W.185, I.207, V.208
- Ligands: CLA.17
Ligand excluded by PLIPLMG.42: 20 residues within 4Å:- Chain A: F.93, W.97, E.98, F.117, L.120, F.155
- Chain C: L.201, L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269
- Chain H: K.5, Y.9
- Ligands: CLA.9, CLA.47, DGD.58
Ligand excluded by PLIPLMG.61: 13 residues within 4Å:- Chain C: H.62, L.421
- Chain J: D.23, V.27, V.30, L.31
- Chain Q: Q.21, I.25
- Ligands: SQD.12, CLA.46, CLA.50, CLA.52, DGD.59
Ligand excluded by PLIPLMG.62: 6 residues within 4Å:- Chain C: L.192, D.193, P.194, W.227, A.234, W.238
Ligand excluded by PLIPLMG.71: 15 residues within 4Å:- Chain D: Y.67, G.70, C.71, N.72, F.73
- Chain F: I.37, M.40, Q.41
- Chain I: F.28, G.31, A.32, L.36
- Ligands: CLA.7, DGD.60, BCR.67
Ligand excluded by PLIPLMG.82: 18 residues within 4Å:- Chain B: Y.40, T.327, G.328, P.329, K.332, F.453, V.457
- Chain D: I.284
- Chain K: F.35
- Chain L: N.4, A.10, L.13, V.17
- Ligands: CLA.23, CLA.29, CLA.30, BCR.33, LHG.81
Ligand excluded by PLIPLMG.87: 15 residues within 4Å:- Chain 7: F.22
- Chain B: W.113, Y.117
- Chain U: N.26, R.27, L.28, I.38, L.42, T.45
- Ligands: CLA.32, BCR.35, UNL.39, PHO.95, UNL.170, BCR.178
Ligand excluded by PLIPLMG.101: 17 residues within 4Å:- Chain 1: K.5, Y.9
- Chain U: F.93, W.97, E.98, F.117, S.124, F.155
- Chain W: L.201, L.202, K.203, S.204, F.206, W.211
- Ligands: CLA.97, CLA.140, DGD.151
Ligand excluded by PLIPLMG.132: 13 residues within 4Å:- Chain 4: F.35
- Chain 5: N.4
- Chain V: Y.40, T.327, G.328, P.329, K.332, V.457
- Ligands: CLA.119, CLA.125, CLA.126, BCR.129, LHG.135
Ligand excluded by PLIPLMG.133: 5 residues within 4Å:- Chain V: P.183, E.184, W.185, I.207
- Ligands: CLA.113
Ligand excluded by PLIPLMG.134: 3 residues within 4Å:- Ligands: CLA.120, CLA.121, LMG.163
Ligand excluded by PLIPLMG.154: 12 residues within 4Å:- Chain 3: D.23, V.27, V.30, L.31
- Chain W: F.58, H.62
- Ligands: CLA.137, CLA.139, CLA.143, DGD.152
- Chain a: Q.21, I.25
Ligand excluded by PLIPLMG.155: 7 residues within 4Å:- Chain W: L.192, D.193, P.194, W.227, A.234, W.238
- Ligands: CLA.141
Ligand excluded by PLIPLMG.163: 9 residues within 4Å:- Chain V: R.224
- Chain X: D.19, K.23, W.32, L.127, F.130, R.134, L.135
- Ligands: LMG.134
Ligand excluded by PLIPLMG.166: 19 residues within 4Å:- Chain 2: F.28, G.31, A.32, L.36, G.37
- Chain X: L.49, Y.67, G.70, C.71, N.72, F.73
- Chain Z: L.26, T.30, I.37, M.40, Q.41
- Ligands: CLA.94, DGD.153, BCR.159
Ligand excluded by PLIP- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.4: 4 residues within 4Å:- Chain A: N.181, H.332, E.333
- Chain D: K.317
Ligand excluded by PLIPCL.5: 5 residues within 4Å:- Chain A: H.337, N.338, F.339
- Chain C: G.341, E.342
Ligand excluded by PLIPCL.90: 4 residues within 4Å:- Chain U: N.181, H.332, E.333
- Chain X: K.317
Ligand excluded by PLIPCL.91: 5 residues within 4Å:- Chain U: H.337, N.338, F.339
- Chain W: G.341, E.342
Ligand excluded by PLIP- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.6: 26 residues within 4Å:- Chain A: F.119, Y.147, P.150, S.153, V.157, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, F.206, T.286, A.287, I.290
- Chain D: L.182, L.205
- Chain N: F.17
- Ligands: CLA.7, PHO.8, CLA.64, CLA.65, LHG.69
15 PLIP interactions:1 interactions with chain N, 12 interactions with chain A, 2 interactions with chain D,- Hydrophobic interactions: N:F.17, A:F.119, A:Y.147, A:P.150, A:F.186, A:Q.187, A:I.192, A:I.192, A:L.193, A:V.202, A:T.286, D:L.182, D:L.205
- Hydrogen bonds: A:S.153
- Metal complexes: A:H.198
CLA.7: 19 residues within 4Å:- Chain A: Q.199, V.202, A.203, F.206, G.207, L.210, W.278
- Chain D: F.157, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.6, PL9.11, DGD.60, PHO.63, CLA.65, LMG.71
11 PLIP interactions:3 interactions with chain A, 7 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: A:V.202, A:L.210, A:W.278, D:F.157, D:F.157, D:I.178, D:F.179, D:F.181, D:L.182, D:L.182
- Metal complexes: H2O.1
CLA.9: 21 residues within 4Å:- Chain A: I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, L.114, F.117, H.118, L.121
- Chain H: V.8, Y.9, V.12, T.13, F.15, V.16
- Ligands: BCR.10, LMG.42, SQD.79
17 PLIP interactions:11 interactions with chain A, 6 interactions with chain H,- Hydrophobic interactions: A:P.39, A:T.40, A:F.93, A:I.96, A:W.97, A:L.114, A:F.117, A:L.121, H:V.8, H:V.12, H:V.12, H:F.15, H:F.15, H:V.16
- Hydrogen bonds: A:I.96
- Salt bridges: A:H.118
- Metal complexes: A:H.118
CLA.17: 10 residues within 4Å:- Chain B: W.185, G.186, P.187, F.190
- Chain G: F.40, I.43, L.54
- Ligands: CLA.18, LMG.36, BCR.76
8 PLIP interactions:4 interactions with chain G, 3 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: G:F.40, G:F.40, G:I.43, G:L.54, B:W.185, B:P.187, B:F.190
- Metal complexes: H2O.1
CLA.18: 21 residues within 4Å:- Chain B: G.189, F.190, P.192, G.197, H.201, A.204, A.205, V.208, F.247, V.251
- Chain G: F.37, F.40, I.44, L.45, Y.48
- Ligands: CLA.17, CLA.19, CLA.24, CLA.25, BCR.76, DGD.77
12 PLIP interactions:5 interactions with chain G, 7 interactions with chain B,- Hydrophobic interactions: G:F.37, G:F.40, G:I.44, G:L.45, B:F.190, B:F.190, B:H.201, B:A.205, B:V.208, B:V.251
- pi-Stacking: G:F.40
- Metal complexes: B:H.201
CLA.19: 22 residues within 4Å:- Chain B: R.68, L.69, A.146, L.149, C.150, F.153, M.166, V.198, H.201, H.202, F.247, A.248, V.251, V.252, T.262
- Chain G: F.37, L.41
- Ligands: CLA.18, CLA.20, CLA.21, CLA.22, BCR.76
12 PLIP interactions:10 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: B:L.149, B:F.153, B:V.198, B:A.248, B:V.251, B:V.252, B:T.262, G:F.37, G:L.41
- Hydrogen bonds: B:R.68
- Salt bridges: B:R.68
- Metal complexes: B:H.202
CLA.20: 21 residues within 4Å:- Chain B: W.33, F.61, F.65, R.68, L.145, V.245, A.248, A.249, V.252, F.451, H.455, F.458, F.462
- Ligands: CLA.19, CLA.21, CLA.22, CLA.23, CLA.27, CLA.28, CLA.29, CLA.31
19 PLIP interactions:19 interactions with chain B,- Hydrophobic interactions: B:W.33, B:F.61, B:F.65, B:F.65, B:F.65, B:L.145, B:V.245, B:A.248, B:A.249, B:V.252, B:F.451, B:F.458, B:F.458, B:F.458, B:F.462, B:F.462
- Salt bridges: B:R.68
- pi-Stacking: B:F.451
- Metal complexes: B:H.455
CLA.21: 22 residues within 4Å:- Chain B: T.27, V.30, A.31, W.33, A.34, V.62, F.65, M.66, R.68, L.69, H.100, L.103, C.150, A.205, G.209
- Ligands: CLA.19, CLA.20, CLA.22, CLA.25, CLA.26, CLA.28, BCR.35
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:T.27, B:V.30, B:A.31, B:W.33, B:A.34, B:L.69, B:L.103
- Salt bridges: B:R.68
- Metal complexes: B:H.100
CLA.22: 22 residues within 4Å:- Chain B: L.69, G.70, V.71, F.90, W.91, V.96, A.99, H.100, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, P.164
- Ligands: UNL.16, CLA.19, CLA.20, CLA.21, BCR.35
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:L.69, B:V.71, B:F.90, B:W.91, B:L.103, B:L.103, B:L.106, B:L.149, B:F.156, B:F.162, B:F.162
- pi-Stacking: B:F.153
- Metal complexes: B:H.157
CLA.23: 24 residues within 4Å:- Chain B: W.33, M.37, Y.40, Q.58, G.59, F.61, L.324, T.327, G.328, P.329, W.450, F.451, A.454
- Chain D: M.281
- Chain K: F.31, F.35
- Chain L: F.14
- Ligands: CLA.20, BCR.33, BCR.34, LHG.40, PL9.68, LMG.82, BCR.178
11 PLIP interactions:7 interactions with chain B, 2 interactions with chain K, 1 interactions with chain L, 1 Ligand-Water interactions,- Hydrophobic interactions: B:Y.40, B:F.61, B:F.61, B:W.450, B:W.450, K:F.31, K:F.35, L:F.14
- Hydrogen bonds: B:G.328
- pi-Stacking: B:F.61
- Metal complexes: H2O.1
CLA.24: 24 residues within 4Å:- Chain B: T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, G.470, T.473, L.474
- Chain D: L.89, F.120, I.123, M.126, L.127, F.130
- Chain G: L.42
- Ligands: CLA.18, CLA.25, CLA.26, SQD.38, CLA.66, DGD.77
16 PLIP interactions:7 interactions with chain B, 8 interactions with chain D, 1 interactions with chain G,- Hydrophobic interactions: B:A.243, B:F.246, B:F.247, B:F.463, B:L.474, D:L.89, D:F.120, D:F.120, D:I.123, D:I.123, D:L.127, D:L.127, D:F.130, G:L.42
- Hydrogen bonds: B:S.239
- Metal complexes: B:H.466
CLA.25: 19 residues within 4Å:- Chain B: F.139, V.208, A.212, F.215, H.216, V.219, P.221, P.222, L.225, L.229
- Chain G: T.26, M.30, F.33
- Ligands: CLA.18, CLA.21, CLA.24, CLA.26, SQD.38, BCR.76
12 PLIP interactions:2 interactions with chain G, 10 interactions with chain B,- Hydrophobic interactions: G:M.30, G:F.33, B:F.139, B:F.139, B:F.139, B:V.208, B:A.212, B:F.215, B:F.215, B:L.229
- Salt bridges: B:H.216
- Metal complexes: B:H.216
CLA.26: 16 residues within 4Å:- Chain B: L.135, M.138, F.139, H.142, L.143, M.231, T.236, V.237, S.240, S.241, A.244
- Ligands: CLA.21, CLA.24, CLA.25, CLA.28, CLA.31
7 PLIP interactions:6 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:F.139, B:F.139, B:M.231, B:T.236, B:V.237, B:A.244
- Metal complexes: H2O.1
CLA.27: 22 residues within 4Å:- Chain B: W.5, Y.6, R.7, V.8, H.9, T.10, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472
- Ligands: CLA.20, CLA.28, CLA.29, CLA.30, LHG.40, LHG.81
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:W.5, B:W.5, B:T.10, B:L.238, B:L.238, B:F.458, B:F.462, B:F.464
- Hydrogen bonds: B:V.8, B:H.9
- Salt bridges: B:H.9, B:H.469, B:R.472
- pi-Stacking: B:W.468, B:H.469
- Metal complexes: B:H.469
CLA.28: 18 residues within 4Å:- Chain B: H.9, L.12, L.19, A.22, H.23, H.26, T.27, V.237, L.238, S.241, V.245
- Ligands: CLA.20, CLA.21, CLA.26, CLA.27, CLA.29, CLA.30, CLA.31
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:L.12, B:L.12, B:L.19, B:A.22, B:H.23, B:V.237, B:L.238, B:L.238, B:L.238, B:V.245
- Hydrogen bonds: B:S.241
- Salt bridges: B:H.23
- Metal complexes: B:H.23
CLA.29: 15 residues within 4Å:- Chain B: H.9, H.26, L.29, V.30, W.33, L.461, F.462
- Ligands: CLA.20, CLA.27, CLA.28, CLA.30, BCR.33, BCR.34, LHG.40, LMG.82
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:L.29, B:V.30, B:V.30, B:W.33, B:W.33, B:L.461, B:F.462, B:F.462
- Salt bridges: B:H.9
- Metal complexes: B:H.26
CLA.30: 19 residues within 4Å:- Chain 7: F.8
- Chain B: V.8, H.9, L.12, M.25, L.29, W.115
- Chain K: Q.8, V.10
- Chain L: L.13, F.21
- Ligands: CLA.27, CLA.28, CLA.29, BCR.33, SQD.41, LMG.82, UNL.84, UNL.176
9 PLIP interactions:2 interactions with chain L, 6 interactions with chain B, 1 interactions with chain 7,- Hydrophobic interactions: L:L.13, L:F.21, B:V.8, B:L.12, B:M.25, B:L.29, B:W.115, 7:F.8
- Metal complexes: B:H.9
CLA.31: 18 residues within 4Å:- Chain B: I.20, H.23, L.24, T.27, L.133, M.138, I.141, H.142, L.145
- Chain G: L.6, L.10, L.13, N.14
- Ligands: CLA.20, CLA.26, CLA.28, CLA.32, UNL.75
7 PLIP interactions:3 interactions with chain G, 4 interactions with chain B,- Hydrophobic interactions: G:L.6, G:L.10, G:L.13, B:I.20, B:L.133, B:L.145
- Metal complexes: B:H.142
CLA.32: 14 residues within 4Å:- Chain B: I.20, L.24, A.110, W.113, H.114, L.120
- Chain G: R.2, T.4, G.7, L.10
- Ligands: CLA.31, BCR.35, LMG.87, UNL.104
10 PLIP interactions:8 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.24, B:W.113, B:W.113, B:L.120, G:T.4, G:L.10
- pi-Stacking: B:W.113, B:W.113
- Metal complexes: B:H.114
CLA.43: 20 residues within 4Å:- Chain C: L.83, L.156, G.159, A.160, L.163, I.212, V.221, H.225, I.228, A.266, M.270, I.273, F.277, V.284, Y.285
- Ligands: CLA.44, CLA.45, CLA.48, CLA.49, BCR.57
11 PLIP interactions:11 interactions with chain C,- Hydrophobic interactions: C:L.156, C:A.160, C:L.163, C:I.212, C:I.228, C:A.266, C:M.270, C:I.273, C:V.284
- Hydrogen bonds: C:Y.285
- Metal complexes: C:H.225
CLA.44: 20 residues within 4Å:- Chain C: W.51, I.75, H.79, G.159, L.162, F.170, L.267, M.270, A.274, V.278, Y.285, L.414, H.418, L.421, F.425
- Ligands: CLA.43, CLA.45, CLA.46, CLA.52, CLA.54
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:I.75, C:L.162, C:F.170, C:L.267, C:A.274, C:L.414, C:L.421, C:F.425
- Hydrogen bonds: C:Y.285
- Salt bridges: C:H.79, C:H.418
- Metal complexes: C:H.418
CLA.45: 17 residues within 4Å:- Chain C: I.48, V.49, A.52, T.56, L.76, H.79, I.80, L.83, V.102, H.106, L.267
- Ligands: CLA.43, CLA.44, CLA.49, CLA.51, CLA.52, CLA.54
7 PLIP interactions:7 interactions with chain C,- Hydrophobic interactions: C:V.49, C:A.52, C:L.83, C:V.102, C:L.267
- Salt bridges: C:H.79
- Metal complexes: C:H.106
CLA.46: 19 residues within 4Å:- Chain C: W.51, M.55, F.58, Q.72, G.73, I.75, W.413, L.414, S.417, H.418, F.424
- Chain J: P.26
- Ligands: CLA.44, CLA.50, CLA.52, DGD.59, DGD.60, LMG.61, LHG.70
7 PLIP interactions:6 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:F.58, C:F.58, C:I.75, C:W.413, C:W.413, C:L.414
- Metal complexes: H2O.1
CLA.47: 19 residues within 4Å:- Chain A: F.33, L.121, M.127, G.128, W.131
- Chain C: F.252, S.261, Y.262, G.265, L.426, H.429, L.430, A.433, R.437
- Chain H: V.16, F.23
- Ligands: LMG.42, CLA.49, BCR.57
14 PLIP interactions:6 interactions with chain A, 1 interactions with chain H, 7 interactions with chain C,- Hydrophobic interactions: A:F.33, A:L.121, A:L.121, A:W.131, A:W.131, A:W.131, H:V.16, C:F.252, C:Y.262, C:Y.262, C:L.426, C:L.430
- Salt bridges: C:R.437
- Metal complexes: C:H.429
CLA.48: 16 residues within 4Å:- Chain C: L.149, L.153, L.201, I.231, G.235, W.238, H.239, T.243, P.244, F.245, W.247, A.248, F.252
- Ligands: CLA.43, CLA.49, BCR.57
8 PLIP interactions:8 interactions with chain C,- Hydrophobic interactions: C:L.149, C:L.153, C:L.153, C:L.201, C:W.238
- Hydrogen bonds: C:F.245
- Salt bridges: C:H.239
- Metal complexes: C:H.239
CLA.49: 18 residues within 4Å:- Chain C: M.145, T.146, L.149, H.152, L.156, F.252, W.254, Y.259, Y.262, S.263, A.266, M.270
- Ligands: CLA.43, CLA.45, CLA.47, CLA.48, CLA.51, BCR.57
12 PLIP interactions:11 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:M.145, C:T.146, C:L.149, C:L.156, C:F.252, C:W.254, C:Y.259, C:Y.259, C:Y.262, C:Y.262, C:A.266
- Metal complexes: H2O.1
CLA.50: 24 residues within 4Å:- Chain C: F.21, W.24, A.25, G.26, N.27, A.28, L.260, L.264, F.424, F.425, G.428, W.431, H.432, R.435
- Chain J: V.30, L.33
- Ligands: SQD.12, CLA.46, CLA.51, CLA.52, CLA.53, DGD.59, LMG.61, LHG.70
13 PLIP interactions:2 interactions with chain J, 11 interactions with chain C,- Hydrophobic interactions: J:V.30, J:L.33, C:A.28, C:L.260, C:L.260, C:L.264, C:F.425, C:W.431
- Hydrogen bonds: C:N.27
- Salt bridges: C:H.432, C:R.435
- pi-Stacking: C:H.432
- Metal complexes: C:H.432
CLA.51: 22 residues within 4Å:- Chain C: N.27, I.31, L.37, A.40, H.41, H.44, Y.137, W.139, I.148, H.152, G.256, Y.259, L.260, S.263, L.264, L.267
- Ligands: CLA.45, CLA.49, CLA.50, CLA.52, CLA.53, CLA.54
11 PLIP interactions:11 interactions with chain C,- Hydrophobic interactions: C:N.27, C:I.31, C:L.37, C:A.40, C:H.44, C:Y.137, C:W.139, C:I.148, C:Y.259
- Hydrogen bonds: C:S.263
- Metal complexes: C:H.41
CLA.52: 18 residues within 4Å:- Chain C: N.27, H.44, L.47, I.48, W.51, L.267, F.424, F.425
- Chain J: P.29, L.33
- Ligands: CLA.44, CLA.45, CLA.46, CLA.50, CLA.51, CLA.53, LMG.61, LHG.70
9 PLIP interactions:8 interactions with chain C, 1 interactions with chain J,- Hydrophobic interactions: C:L.47, C:I.48, C:W.51, C:L.267, C:F.424, C:F.425, J:P.29
- Hydrogen bonds: C:N.27
- Metal complexes: C:H.44
CLA.53: 28 residues within 4Å:- Chain C: T.12, N.13, R.14, W.23, G.26, N.27, R.29, L.30, L.33, K.36, A.40, H.44, L.47, I.122
- Chain J: F.32, F.37, W.39, Q.40
- Chain Q: I.35, N.45, L.46
- Chain S: V.20, V.23, P.24
- Ligands: CLA.50, CLA.51, CLA.52, BCR.80
17 PLIP interactions:5 interactions with chain J, 6 interactions with chain C, 2 interactions with chain Q, 4 interactions with chain S,- Hydrophobic interactions: J:F.32, J:F.37, J:W.39, C:L.30, C:L.30, C:K.36, C:L.47, Q:I.35, Q:L.46, S:V.20, S:V.20, S:V.23, S:P.24
- pi-Stacking: J:W.39, J:W.39
- Hydrogen bonds: C:R.29
- Salt bridges: C:R.14
CLA.54: 18 residues within 4Å:- Chain C: H.41, A.45, L.113, F.134, F.135, Y.137, I.148, F.151, H.152, V.155, I.158, G.159, L.162
- Ligands: CLA.44, CLA.45, CLA.51, CLA.55, BCR.56
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:H.41, C:Y.137, C:I.148, C:F.151, C:F.151, C:V.155, C:I.158, C:L.162
- pi-Stacking: C:H.152
- Metal complexes: C:H.152
CLA.55: 12 residues within 4Å:- Chain C: L.38, V.42, V.112, G.116, Y.119, H.120, P.125, L.128, Y.131, F.135
- Ligands: CLA.54, BCR.56
11 PLIP interactions:11 interactions with chain C,- Hydrophobic interactions: C:L.38, C:V.42, C:V.112, C:Y.119, C:L.128, C:Y.131, C:F.135, C:F.135, C:F.135
- Hydrogen bonds: C:Y.119
- Metal complexes: C:H.120
CLA.64: 21 residues within 4Å:- Chain A: T.45, F.158, M.172, I.176, T.179, F.180, M.183
- Chain D: M.198, V.201, A.202, L.205, G.206, L.209
- Chain N: F.10, I.14
- Ligands: LMG.3, CLA.6, PHO.8, CLA.65, PL9.68, LHG.69
8 PLIP interactions:2 interactions with chain N, 2 interactions with chain D, 3 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: N:F.10, N:I.14, D:V.201, D:L.209, A:T.45, A:F.158, A:F.180
- Metal complexes: H2O.1
CLA.65: 25 residues within 4Å:- Chain A: M.183, F.206
- Chain D: L.45, W.48, P.149, V.152, S.155, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, S.282, A.283
- Ligands: CLA.6, CLA.7, PHO.63, CLA.64
14 PLIP interactions:1 interactions with chain A, 13 interactions with chain D,- Hydrophobic interactions: A:F.206, D:L.45, D:W.48, D:V.152, D:F.181, D:L.182, D:F.185, D:Q.186, D:T.192, D:V.201, D:V.204, D:L.205
- pi-Stacking: D:W.191
- Metal complexes: D:H.197
CLA.66: 22 residues within 4Å:- Chain D: I.35, P.39, L.43, L.89, L.90, L.91, L.92, W.93, W.104, T.112, F.113, L.116, H.117, F.120
- Chain G: L.42
- Chain R: F.11, G.13, L.14, L.15, G.17, A.18
- Ligands: CLA.24
17 PLIP interactions:9 interactions with chain D, 1 interactions with chain G, 7 interactions with chain R,- Hydrophobic interactions: D:P.39, D:L.43, D:W.93, D:L.116, D:F.120, G:L.42, R:F.11, R:L.14, R:L.14, R:L.15, R:L.15, R:L.15, R:A.18
- Hydrogen bonds: D:L.92
- Salt bridges: D:H.117
- pi-Stacking: D:F.113
- Metal complexes: D:H.117
CLA.93: 24 residues within 4Å:- Chain U: F.119, Y.147, P.150, S.153, V.157, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, F.206, T.286, I.290
- Chain X: L.182, L.205
- Ligands: CLA.94, PHO.95, CLA.105, CLA.157, LHG.162
15 PLIP interactions:13 interactions with chain U, 2 interactions with chain X,- Hydrophobic interactions: U:F.119, U:F.119, U:F.186, U:Q.187, U:I.192, U:I.192, U:L.193, U:L.193, U:V.202, U:F.206, U:F.206, U:T.286, X:L.182, X:L.205
- Metal complexes: U:H.198
CLA.94: 20 residues within 4Å:- Chain U: Q.199, V.202, A.203, F.206, G.207, L.210, W.278
- Chain X: F.157, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.93, PHO.96, PL9.99, DGD.153, CLA.157, LHG.164, LMG.166
8 PLIP interactions:3 interactions with chain U, 4 interactions with chain X, 1 Ligand-Water interactions,- Hydrophobic interactions: U:V.202, U:L.210, U:W.278, X:F.157, X:F.157, X:F.181, X:L.182
- Metal complexes: H2O.3
CLA.97: 23 residues within 4Å:- Chain 1: V.8, Y.9, V.11, V.12, F.15, F.19
- Chain U: I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, L.114, F.117, H.118
- Ligands: BCR.98, LMG.101, CLA.140, CLA.141, BCR.150, UNL.170
18 PLIP interactions:12 interactions with chain U, 6 interactions with chain 1,- Hydrophobic interactions: U:P.39, U:T.40, U:F.93, U:P.95, U:I.96, U:W.97, U:W.97, U:L.114, U:F.117, 1:Y.9, 1:V.11, 1:V.12, 1:V.12, 1:F.15, 1:F.19
- Hydrogen bonds: U:I.96
- Salt bridges: U:H.118
- Metal complexes: U:H.118
CLA.105: 19 residues within 4Å:- Chain U: V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain X: M.198, V.201, A.202, L.205, G.206, L.209
- Ligands: CLA.93, PHO.95, CLA.157, PL9.160, LHG.162
7 PLIP interactions:2 interactions with chain X, 4 interactions with chain U, 1 Ligand-Water interactions,- Hydrophobic interactions: X:V.201, X:L.209, U:V.157, U:F.158, U:F.180, U:F.182
- Metal complexes: H2O.3
CLA.113: 9 residues within 4Å:- Chain 0: F.40, L.54
- Chain V: W.185, G.186, P.187, F.190
- Ligands: CLA.114, LMG.133, BCR.168
6 PLIP interactions:3 interactions with chain 0, 2 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: 0:F.40, 0:F.40, 0:L.54, V:P.187, V:F.190
- Metal complexes: H2O.3
CLA.114: 20 residues within 4Å:- Chain 0: F.37, F.40, I.44, L.45, Y.48
- Chain V: W.185, G.189, F.190, P.192, G.197, A.200, H.201, A.204, A.205, F.247, F.250
- Ligands: CLA.113, CLA.115, BCR.168, DGD.169
15 PLIP interactions:11 interactions with chain V, 4 interactions with chain 0,- Hydrophobic interactions: V:W.185, V:F.190, V:F.190, V:A.200, V:H.201, V:A.204, V:A.205, V:F.247, V:F.247, V:F.250, 0:F.37, 0:F.40, 0:L.45
- Metal complexes: V:H.201
- pi-Stacking: 0:F.40
CLA.115: 23 residues within 4Å:- Chain 0: M.34, F.37, L.41
- Chain V: R.68, L.69, A.146, L.149, C.150, F.153, M.166, H.201, H.202, F.247, A.248, V.252, T.262
- Ligands: CLA.114, CLA.116, CLA.117, CLA.118, CLA.121, CLA.122, BCR.168
10 PLIP interactions:8 interactions with chain V, 2 interactions with chain 0,- Hydrophobic interactions: V:L.149, V:F.153, V:F.153, V:A.248, 0:F.37, 0:L.41
- Hydrogen bonds: V:R.68
- Salt bridges: V:R.68
- pi-Cation interactions: V:H.201
- Metal complexes: V:H.202
CLA.116: 23 residues within 4Å:- Chain V: W.33, F.61, F.65, R.68, L.145, L.148, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, F.462
- Ligands: CLA.115, CLA.117, CLA.118, CLA.119, CLA.123, CLA.124, CLA.125, CLA.127
19 PLIP interactions:19 interactions with chain V,- Hydrophobic interactions: V:W.33, V:F.61, V:F.61, V:F.65, V:F.65, V:L.145, V:L.148, V:L.149, V:V.245, V:A.248, V:A.249, V:F.451, V:F.458, V:F.458, V:F.458, V:F.462, V:F.462
- Salt bridges: V:R.68
- Metal complexes: V:H.455
CLA.117: 24 residues within 4Å:- Chain V: T.27, V.30, A.31, W.33, A.34, V.62, F.65, M.66, R.68, L.69, V.96, H.100, L.103, L.143, C.150, A.205, G.209
- Ligands: CLA.115, CLA.116, CLA.118, CLA.121, CLA.122, CLA.124, CLA.127
11 PLIP interactions:11 interactions with chain V,- Hydrophobic interactions: V:T.27, V:A.31, V:W.33, V:A.34, V:L.69, V:V.96, V:L.103, V:L.143
- Hydrogen bonds: V:M.66
- Salt bridges: V:R.68
- Metal complexes: V:H.100
CLA.118: 22 residues within 4Å:- Chain V: L.69, G.70, V.71, F.90, W.91, V.96, A.99, H.100, V.102, L.103, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.115, CLA.116, CLA.117, BCR.131
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:L.69, V:F.90, V:F.90, V:W.91, V:W.91, V:V.102, V:L.103, V:L.149, V:F.153, V:F.156, V:F.162
- Metal complexes: V:H.157
CLA.119: 25 residues within 4Å:- Chain 4: L.27, F.31
- Chain V: W.33, M.37, Y.40, Q.58, G.59, F.61, L.324, F.325, T.327, G.328, P.329, W.450, F.451, A.454, H.455
- Ligands: BCR.108, CLA.116, CLA.125, BCR.129, BCR.130, LMG.132, PL9.160, LHG.161
15 PLIP interactions:2 interactions with chain 4, 12 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: 4:L.27, 4:F.31, V:Y.40, V:F.61, V:F.61, V:F.325, V:T.327, V:W.450, V:W.450, V:W.450
- Hydrogen bonds: V:Y.40, V:G.328
- pi-Stacking: V:F.61, V:F.61
- Metal complexes: H2O.3
CLA.120: 26 residues within 4Å:- Chain 0: L.38, L.42
- Chain V: T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, G.470, T.473, L.474
- Chain X: L.36, F.120, I.123, M.126, L.127, F.130, I.150
- Ligands: CLA.121, CLA.122, LMG.134, CLA.158, DGD.169
20 PLIP interactions:9 interactions with chain X, 9 interactions with chain V, 2 interactions with chain 0,- Hydrophobic interactions: X:L.36, X:F.120, X:F.120, X:I.123, X:I.123, X:M.126, X:L.127, X:F.130, X:I.150, V:A.243, V:F.246, V:F.247, V:F.463, V:F.463, V:I.467, 0:L.38, 0:L.42
- Hydrogen bonds: V:S.239
- Salt bridges: V:H.466
- Metal complexes: V:H.466
CLA.121: 20 residues within 4Å:- Chain 0: T.26, T.27, M.30, F.33
- Chain V: F.139, V.208, A.212, F.215, H.216, V.219, P.221, P.222, L.225, L.229
- Ligands: CLA.115, CLA.117, CLA.120, CLA.122, LMG.134, BCR.168
11 PLIP interactions:3 interactions with chain 0, 8 interactions with chain V,- Hydrophobic interactions: 0:M.30, 0:F.33, V:F.139, V:V.208, V:A.212, V:F.215, V:F.215, V:L.225
- Hydrogen bonds: 0:T.26
- Salt bridges: V:H.216
- Metal complexes: V:H.216
CLA.122: 17 residues within 4Å:- Chain V: L.135, F.139, H.142, L.143, A.146, M.231, T.236, V.237, S.240, S.241, A.244
- Ligands: CLA.115, CLA.117, CLA.120, CLA.121, CLA.124, CLA.127
6 PLIP interactions:5 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: V:F.139, V:A.146, V:M.231, V:T.236, V:V.237
- Metal complexes: H2O.3
CLA.123: 22 residues within 4Å:- Chain V: W.5, Y.6, R.7, V.8, H.9, T.10, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472
- Ligands: CLA.116, CLA.124, CLA.125, CLA.126, LHG.135, LHG.161
14 PLIP interactions:14 interactions with chain V,- Hydrophobic interactions: V:T.10, V:L.238, V:L.238, V:I.242, V:F.458, V:F.462, V:F.464, V:W.468
- Hydrogen bonds: V:V.8, V:H.9
- Salt bridges: V:H.9, V:R.472
- pi-Stacking: V:W.468
- Metal complexes: V:H.469
CLA.124: 18 residues within 4Å:- Chain V: H.9, L.12, A.22, H.23, H.26, T.27, I.234, V.237, L.238, S.241, V.245
- Ligands: CLA.116, CLA.117, CLA.122, CLA.123, CLA.125, CLA.126, CLA.127
10 PLIP interactions:10 interactions with chain V,- Hydrophobic interactions: V:L.12, V:L.12, V:A.22, V:H.23, V:H.26, V:T.27, V:V.237
- Hydrogen bonds: V:S.241
- Salt bridges: V:H.23
- Metal complexes: V:H.23
CLA.125: 17 residues within 4Å:- Chain 5: F.14
- Chain V: H.9, H.26, L.29, V.30, W.33, L.461, F.462
- Ligands: CLA.116, CLA.119, CLA.123, CLA.124, CLA.126, BCR.129, BCR.130, LMG.132, LHG.161
11 PLIP interactions:10 interactions with chain V, 1 interactions with chain 5,- Hydrophobic interactions: V:L.29, V:V.30, V:V.30, V:W.33, V:W.33, V:L.461, V:F.462, 5:F.14
- Salt bridges: V:H.9
- pi-Cation interactions: V:H.26
- Metal complexes: V:H.26
CLA.126: 21 residues within 4Å:- Chain 4: Q.8, V.10
- Chain 5: F.21, L.25
- Chain N: F.8
- Chain V: V.8, H.9, V.11, L.12, A.22, M.25, L.29
- Ligands: UNL.83, SQD.107, UNL.111, CLA.123, CLA.124, CLA.125, BCR.129, LMG.132, UNL.175
9 PLIP interactions:2 interactions with chain 5, 6 interactions with chain V, 1 interactions with chain N,- Hydrophobic interactions: 5:F.21, 5:L.25, V:V.8, V:L.12, V:M.25, V:L.29, N:F.8
- pi-Stacking: V:H.9
- Metal complexes: V:H.9
CLA.127: 17 residues within 4Å:- Chain 0: L.10, L.13, N.14
- Chain V: I.20, H.23, L.24, T.27, M.138, I.141, H.142, L.145
- Ligands: CLA.116, CLA.117, CLA.122, CLA.124, CLA.128, BCR.131
7 PLIP interactions:4 interactions with chain 0, 3 interactions with chain V,- Hydrophobic interactions: 0:L.10, 0:L.10, 0:L.13, 0:N.14, V:I.20, V:L.145
- Metal complexes: V:H.142
CLA.128: 14 residues within 4Å:- Chain 0: T.4, L.6, G.7, L.10
- Chain V: I.20, L.24, A.110, W.113, H.114, L.120, L.122, F.123
- Ligands: CLA.127, BCR.131
10 PLIP interactions:1 interactions with chain 0, 9 interactions with chain V,- Hydrophobic interactions: 0:L.10, V:I.20, V:L.24, V:W.113, V:W.113, V:L.120, V:L.122, V:F.123
- pi-Stacking: V:W.113
- Metal complexes: V:H.114
CLA.136: 20 residues within 4Å:- Chain W: L.83, L.156, G.159, A.160, L.163, I.212, V.221, H.225, I.228, A.266, M.270, I.273, F.277, V.284, Y.285
- Ligands: CLA.137, CLA.138, CLA.141, CLA.142, BCR.150
12 PLIP interactions:12 interactions with chain W,- Hydrophobic interactions: W:L.156, W:A.160, W:L.163, W:L.163, W:I.212, W:I.228, W:A.266, W:I.273, W:V.284, W:V.284
- pi-Cation interactions: W:H.225
- Metal complexes: W:H.225
CLA.137: 21 residues within 4Å:- Chain W: W.51, L.76, H.79, L.162, A.165, K.166, F.170, L.267, M.270, A.274, Y.285, L.414, H.418, L.421, F.425
- Ligands: CLA.136, CLA.138, CLA.139, CLA.145, CLA.147, LMG.154
14 PLIP interactions:14 interactions with chain W,- Hydrophobic interactions: W:W.51, W:L.76, W:A.165, W:K.166, W:F.170, W:L.267, W:A.274, W:L.414, W:L.421, W:F.425
- Hydrogen bonds: W:Y.285
- Salt bridges: W:H.79, W:H.418
- Metal complexes: W:H.418
CLA.138: 15 residues within 4Å:- Chain W: I.48, V.49, A.52, T.56, L.76, H.79, I.80, L.83, V.102, H.106
- Ligands: CLA.136, CLA.137, CLA.142, CLA.147, CLA.148
6 PLIP interactions:6 interactions with chain W,- Hydrophobic interactions: W:V.49, W:A.52, W:L.83, W:V.102
- Salt bridges: W:H.79
- Metal complexes: W:H.106
CLA.139: 16 residues within 4Å:- Chain 3: P.26, V.30
- Chain W: W.51, M.55, F.58, Q.72, G.73, I.75, W.413, L.414, S.417, H.418
- Ligands: CLA.137, CLA.145, DGD.152, LMG.154
5 PLIP interactions:3 interactions with chain W, 1 interactions with chain 3, 1 Ligand-Water interactions,- Hydrophobic interactions: W:W.413, W:W.413, W:L.414, 3:V.30
- Metal complexes: H2O.3
CLA.140: 22 residues within 4Å:- Chain 1: V.16, F.23
- Chain U: F.33, I.36, L.121, G.128, W.131
- Chain W: F.252, S.261, Y.262, G.265, L.426, H.429, L.430, A.433, G.434, R.437
- Ligands: CLA.97, LMG.101, CLA.142, BCR.150, DGD.151
14 PLIP interactions:5 interactions with chain W, 7 interactions with chain U, 2 interactions with chain 1,- Hydrophobic interactions: W:Y.262, W:Y.262, W:L.426, U:F.33, U:I.36, U:L.121, U:W.131, U:W.131, U:W.131, U:W.131, 1:V.16, 1:F.23
- Salt bridges: W:R.437
- Metal complexes: W:H.429
CLA.141: 19 residues within 4Å:- Chain W: L.149, L.153, I.231, G.235, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252
- Ligands: CLA.97, CLA.136, CLA.142, BCR.150, DGD.151, LMG.155
7 PLIP interactions:7 interactions with chain W,- Hydrophobic interactions: W:L.153, W:L.153, W:I.231, W:W.238
- Hydrogen bonds: W:F.245
- Salt bridges: W:H.239
- Metal complexes: W:H.239
CLA.142: 20 residues within 4Å:- Chain W: M.145, T.146, L.149, H.152, L.153, L.156, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.136, CLA.138, CLA.140, CLA.141, CLA.144, BCR.150
14 PLIP interactions:13 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: W:M.145, W:T.146, W:L.149, W:L.149, W:F.252, W:W.254, W:Y.259, W:Y.259, W:Y.262, W:Y.262, W:A.266, W:L.267
- Hydrogen bonds: W:H.152
- Metal complexes: H2O.3
CLA.143: 22 residues within 4Å:- Chain 3: L.33
- Chain W: F.21, W.24, A.25, G.26, N.27, A.28, L.260, L.264, F.424, F.425, G.428, W.431, H.432, R.435
- Ligands: SQD.100, LHG.106, CLA.144, CLA.145, CLA.146, DGD.152, LMG.154
11 PLIP interactions:10 interactions with chain W, 1 interactions with chain 3,- Hydrophobic interactions: W:L.260, W:L.260, W:L.264, W:F.425, W:W.431, 3:L.33
- Hydrogen bonds: W:N.27
- Salt bridges: W:H.432, W:R.435
- pi-Stacking: W:W.431
- Metal complexes: W:H.432
CLA.144: 21 residues within 4Å:- Chain W: N.27, L.37, A.40, H.41, H.44, Y.137, W.139, M.145, I.148, L.156, G.256, E.257, Y.259, L.260, S.263, L.267
- Ligands: CLA.142, CLA.143, CLA.145, CLA.146, CLA.147
18 PLIP interactions:18 interactions with chain W,- Hydrophobic interactions: W:N.27, W:L.37, W:L.37, W:A.40, W:H.44, W:Y.137, W:Y.137, W:W.139, W:W.139, W:I.148, W:L.156, W:Y.259, W:L.260
- Hydrogen bonds: W:S.263
- pi-Stacking: W:H.41, W:H.41
- pi-Cation interactions: W:H.41
- Metal complexes: W:H.41
CLA.145: 16 residues within 4Å:- Chain 3: P.29, V.30, L.33
- Chain W: N.27, H.44, L.47, I.48, W.51, L.267, F.424, F.425
- Ligands: CLA.137, CLA.139, CLA.143, CLA.144, CLA.146
13 PLIP interactions:10 interactions with chain W, 3 interactions with chain 3,- Hydrophobic interactions: W:L.47, W:I.48, W:I.48, W:I.48, W:W.51, W:L.267, W:F.424, W:F.425, 3:P.29, 3:V.30, 3:L.33
- Hydrogen bonds: W:N.27
- Metal complexes: W:H.44
CLA.146: 33 residues within 4Å:- Chain 3: F.32, L.33, L.35, A.36, F.37, W.39, Q.40
- Chain W: N.13, R.14, W.23, G.26, N.27, R.29, L.30, L.33, K.36, A.40, A.43, G.114, F.115, V.118, A.121, I.122
- Ligands: CLA.143, CLA.144, CLA.145, BCR.173, UNL.180
- Chain a: N.45, L.46
- Chain c: V.20, V.23, A.28
18 PLIP interactions:7 interactions with chain W, 6 interactions with chain 3, 4 interactions with chain c, 1 interactions with chain a,- Hydrophobic interactions: W:R.14, W:A.40, W:A.43, W:V.118, W:A.121, 3:F.32, 3:L.33, 3:L.35, 3:A.36, 3:F.37, c:V.20, c:V.20, c:V.23, c:A.28, a:L.46
- Hydrogen bonds: W:R.29
- Salt bridges: W:R.14
- pi-Stacking: 3:W.39
CLA.147: 20 residues within 4Å:- Chain W: L.38, H.41, V.42, A.45, L.113, F.135, Y.137, I.148, F.151, H.152, I.154, V.155, I.158, G.159, L.162
- Ligands: CLA.137, CLA.138, CLA.144, CLA.148, BCR.149
11 PLIP interactions:11 interactions with chain W,- Hydrophobic interactions: W:L.38, W:H.41, W:Y.137, W:I.148, W:F.151, W:F.151, W:I.154, W:V.155, W:I.158, W:L.162
- Metal complexes: W:H.152
CLA.148: 13 residues within 4Å:- Chain W: L.38, V.42, V.112, L.113, G.116, Y.119, H.120, P.125, Y.131, F.135
- Ligands: CLA.138, CLA.147, BCR.149
9 PLIP interactions:9 interactions with chain W,- Hydrophobic interactions: W:L.38, W:V.42, W:V.42, W:Y.119, W:Y.131, W:F.135, W:F.135, W:F.135
- Metal complexes: W:H.120
CLA.157: 24 residues within 4Å:- Chain U: M.183, F.206
- Chain X: L.45, W.48, P.149, V.152, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, S.282, A.283, V.286
- Ligands: CLA.93, CLA.94, PHO.96, CLA.105
15 PLIP interactions:14 interactions with chain X, 1 interactions with chain U,- Hydrophobic interactions: X:L.45, X:W.48, X:P.149, X:V.152, X:F.181, X:L.182, X:F.185, X:Q.186, X:T.192, X:T.192, X:V.201, X:V.204, U:F.206
- pi-Stacking: X:W.191
- Metal complexes: X:H.197
CLA.158: 26 residues within 4Å:- Chain 0: L.38, L.42
- Chain X: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, T.112, F.113, L.116, H.117
- Ligands: PL9.99, CLA.120, UNL.156, SQD.167
- Chain b: F.11, G.13, L.15, G.17, A.18
15 PLIP interactions:11 interactions with chain X, 2 interactions with chain 0, 2 interactions with chain b,- Hydrophobic interactions: X:L.36, X:P.39, X:L.43, X:L.92, X:W.93, X:W.93, X:L.116, 0:L.38, 0:L.42, b:F.11, b:L.15
- Hydrogen bonds: X:L.92
- Salt bridges: X:H.117
- pi-Stacking: X:F.113
- Metal complexes: X:H.117
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.8: 26 residues within 4Å:- Chain A: L.41, A.44, T.45, F.48, I.115, F.119, Y.126, Q.130, A.146, Y.147, P.150, L.174, G.175, P.279, V.283
- Chain D: A.208, L.209, A.212, I.213, W.253, F.257
- Ligands: LMG.3, CLA.6, CLA.64, PL9.68, LHG.69
17 PLIP interactions:15 interactions with chain A, 2 interactions with chain D- Hydrophobic interactions: A:L.41, A:A.44, A:F.48, A:I.115, A:F.119, A:F.119, A:Y.126, A:A.146, A:Y.147, A:P.150, A:L.174, A:V.283, D:A.212, D:F.257
- Hydrogen bonds: A:Q.130, A:Y.147
- pi-Stacking: A:Y.147
PHO.63: 28 residues within 4Å:- Chain A: F.206, A.209, L.210, M.214, F.255
- Chain D: L.37, A.41, L.45, W.48, I.114, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, A.148, P.149, F.153, F.173, G.174, V.175, P.275, L.279
- Ligands: CLA.7, PL9.11, CLA.65
20 PLIP interactions:18 interactions with chain D, 2 interactions with chain A- Hydrophobic interactions: D:A.41, D:L.45, D:W.48, D:W.48, D:W.48, D:W.48, D:I.114, D:F.125, D:A.145, D:A.148, D:P.149, D:F.153, D:F.173, D:V.175, D:L.279, A:F.206, A:L.210
- Hydrogen bonds: D:Q.129, D:N.142
- pi-Stacking: D:F.146
PHO.95: 26 residues within 4Å:- Chain U: L.41, A.44, T.45, F.48, I.115, F.119, Y.126, Q.130, A.146, Y.147, P.150, L.174, G.175, P.279, V.283
- Chain X: L.205, A.208, L.209, A.212, I.213, W.253, F.257
- Ligands: LMG.87, CLA.93, CLA.105, PL9.160
16 PLIP interactions:3 interactions with chain X, 13 interactions with chain U- Hydrophobic interactions: X:L.205, X:A.208, X:A.212, U:L.41, U:A.44, U:F.48, U:I.115, U:F.119, U:F.119, U:Y.126, U:Y.147, U:Y.147, U:P.150, U:L.174
- Hydrogen bonds: U:Y.126, U:Q.130
PHO.96: 30 residues within 4Å:- Chain U: F.206, A.209, L.210, M.214, F.255, L.258
- Chain X: L.37, A.41, A.44, L.45, W.48, I.114, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, A.148, P.149, F.153, F.173, G.174, V.175, P.275, L.279
- Ligands: CLA.94, PL9.99, CLA.157
21 PLIP interactions:19 interactions with chain X, 2 interactions with chain U- Hydrophobic interactions: X:A.41, X:L.45, X:W.48, X:W.48, X:W.48, X:W.48, X:I.114, X:L.122, X:F.125, X:A.145, X:A.148, X:P.149, X:F.153, X:V.175, X:L.279, U:F.206, U:L.210
- Hydrogen bonds: X:Q.129, X:N.142
- pi-Stacking: X:F.146, X:F.146
- 22 x BCR: BETA-CAROTENE(Non-covalent)
BCR.10: 16 residues within 4Å:- Chain A: V.35, L.42, A.43, I.46, C.47, I.50, A.51, A.54, L.102, W.105, L.106, P.111
- Chain H: F.15
- Ligands: CLA.9, SQD.14, SQD.79
Ligand excluded by PLIPBCR.33: 11 residues within 4Å:- Chain B: M.25, L.29, W.115
- Chain L: L.13
- Ligands: CLA.23, CLA.29, CLA.30, BCR.34, SQD.41, LMG.82, BCR.178
Ligand excluded by PLIPBCR.34: 14 residues within 4Å:- Chain B: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105
- Ligands: CLA.23, CLA.29, BCR.33, SQD.41, UNL.177, BCR.178
Ligand excluded by PLIPBCR.35: 13 residues within 4Å:- Chain 7: F.18, F.22
- Chain B: L.106, L.107, L.109, A.110, C.112, W.113, V.116
- Ligands: CLA.21, CLA.22, CLA.32, LMG.87
Ligand excluded by PLIPBCR.56: 13 residues within 4Å:- Chain C: F.100, V.104, V.105, I.108, S.109, V.112, L.113, F.135
- Chain J: Y.15
- Chain S: G.55, N.58
- Ligands: CLA.54, CLA.55
Ligand excluded by PLIPBCR.57: 17 residues within 4Å:- Chain C: I.197, Y.200, L.201, I.212, D.220, V.221, G.224, H.225, I.228, F.252, M.269
- Chain H: F.23, L.24
- Ligands: CLA.43, CLA.47, CLA.48, CLA.49
Ligand excluded by PLIPBCR.67: 13 residues within 4Å:- Chain D: Y.42, L.43, G.46, G.47, L.49, T.50, F.113
- Chain F: P.29, T.30, F.33
- Chain I: V.21, V.25
- Ligands: LMG.71
Ligand excluded by PLIPBCR.76: 11 residues within 4Å:- Chain G: L.36, F.37, V.39, F.40, I.43, L.54
- Chain R: T.2
- Ligands: CLA.17, CLA.18, CLA.19, CLA.25
Ligand excluded by PLIPBCR.80: 15 residues within 4Å:- Chain C: A.43, G.46, L.47, F.50, L.107, S.110, A.111, G.114
- Chain J: Y.15, F.32, L.35, W.39
- Chain S: S.16
- Ligands: CLA.53, BCR.86
Ligand excluded by PLIPBCR.86: 22 residues within 4Å:- Chain C: F.50
- Chain I: A.14, T.15, M.19
- Chain J: L.21, L.25, I.28, L.31, F.32, A.34, F.37, V.38, A.41
- Chain Q: I.28, G.29, G.32, P.33
- Chain S: V.13, S.16, F.17
- Ligands: SQD.12, BCR.80
Ligand excluded by PLIPBCR.98: 13 residues within 4Å:- Chain 1: F.15
- Chain U: V.35, L.42, A.43, I.50, A.51, I.96, L.102, W.105
- Ligands: UNL.39, CLA.97, UNL.104, UNL.170
Ligand excluded by PLIPBCR.108: 18 residues within 4Å:- Chain N: I.4, F.8, A.11, I.14, A.15, F.17, F.18, I.21, F.22
- Chain V: W.33, S.36, M.37, Y.40
- Ligands: LMG.3, UNL.112, CLA.119, BCR.129, BCR.130
Ligand excluded by PLIPBCR.129: 10 residues within 4Å:- Chain 5: L.13
- Chain V: M.25, L.29, W.115
- Ligands: BCR.108, CLA.119, CLA.125, CLA.126, BCR.130, LMG.132
Ligand excluded by PLIPBCR.130: 11 residues within 4Å:- Chain V: L.29, G.32, W.33, I.101, V.102, G.105
- Ligands: LMG.3, BCR.108, CLA.119, CLA.125, BCR.129
Ligand excluded by PLIPBCR.131: 12 residues within 4Å:- Chain N: F.18
- Chain V: L.106, L.109, A.110, C.112, W.113, V.116, Y.117
- Ligands: LMG.3, CLA.118, CLA.127, CLA.128
Ligand excluded by PLIPBCR.149: 12 residues within 4Å:- Chain 3: Y.15
- Chain W: F.100, V.104, I.108, S.109, V.112, L.113, F.135
- Ligands: CLA.147, CLA.148
- Chain c: V.51, G.55
Ligand excluded by PLIPBCR.150: 17 residues within 4Å:- Chain 1: V.20, F.23, L.24
- Chain W: I.197, F.198, Y.200, L.201, I.212, G.224, H.225, I.228, F.252
- Ligands: CLA.97, CLA.136, CLA.140, CLA.141, CLA.142
Ligand excluded by PLIPBCR.159: 15 residues within 4Å:- Chain 2: V.21
- Chain X: Y.42, L.43, G.46, G.47, L.49, T.50, F.101, L.110, F.113
- Chain Z: P.29, T.30, F.33, L.34
- Ligands: LMG.166
Ligand excluded by PLIPBCR.168: 13 residues within 4Å:- Chain 0: M.30, F.33, M.34, L.36, F.37, V.39, F.40, I.43, L.54
- Ligands: CLA.113, CLA.114, CLA.115, CLA.121
Ligand excluded by PLIPBCR.172: 20 residues within 4Å:- Chain 2: A.14, T.15, G.18, M.19
- Chain 3: L.25, I.28, L.31, F.32, A.34, F.37, V.38
- Chain W: F.50
- Ligands: BCR.173
- Chain a: I.28, G.29, G.32
- Chain c: V.13, S.16, F.17, V.20
Ligand excluded by PLIPBCR.173: 17 residues within 4Å:- Chain 3: Y.15, F.18, L.21, F.32, L.35
- Chain W: A.43, L.47, L.107, S.110, A.111, G.114
- Ligands: CLA.146, BCR.172
- Chain c: L.9, L.12, S.16, V.20
Ligand excluded by PLIPBCR.178: 15 residues within 4Å:- Chain 7: I.4, F.8, A.11, A.15, F.17, F.18, F.22
- Chain B: W.33, S.36, M.37
- Ligands: CLA.23, BCR.33, BCR.34, SQD.41, LMG.87
Ligand excluded by PLIP- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.11: 24 residues within 4Å:- Chain A: F.211, M.214, H.215, L.218, I.248, A.251, H.252, F.255, A.263, S.264, F.265, L.271, L.275
- Chain D: F.38, P.39, L.45
- Chain F: A.22, T.25, L.26
- Chain R: T.24
- Ligands: CLA.7, PHO.63, SQD.72, LHG.73
20 PLIP interactions:4 interactions with chain D, 1 interactions with chain R, 13 interactions with chain A, 2 interactions with chain F- Hydrophobic interactions: D:F.38, D:F.38, D:P.39, D:L.45, R:T.24, A:F.211, A:F.211, A:M.214, A:L.218, A:I.248, A:A.251, A:F.255, A:F.255, A:F.265, A:L.271, A:L.271, A:L.275, F:A.22, F:L.26
- Hydrogen bonds: A:F.265
PL9.68: 24 residues within 4Å:- Chain A: V.49, F.52, I.77
- Chain D: M.198, M.199, A.202, L.209, L.210, H.214, T.217, W.253, A.260, F.261, L.267, F.273, V.274
- Chain K: V.26, L.27, L.29
- Chain N: F.10
- Ligands: PHO.8, CLA.23, CLA.64, LHG.81
24 PLIP interactions:14 interactions with chain D, 3 interactions with chain K, 5 interactions with chain A, 2 interactions with chain N- Hydrophobic interactions: D:M.199, D:A.202, D:L.209, D:L.210, D:T.217, D:W.253, D:F.261, D:F.261, D:L.267, D:F.273, D:V.274, K:V.26, K:L.27, K:L.29, A:V.49, A:F.52, A:F.52, A:F.52, A:I.77, N:F.10, N:F.10
- Hydrogen bonds: D:T.217, D:F.261
- pi-Stacking: D:F.261
PL9.99: 26 residues within 4Å:- Chain U: F.211, M.214, H.215, L.218, A.251, H.252, F.255, A.263, S.264, F.265, L.271, F.274, L.275
- Chain X: V.30, F.38, P.39, A.41, Y.42, L.45
- Chain Z: A.22
- Ligands: CLA.94, PHO.96, CLA.158, LHG.164, SQD.167
- Chain b: T.24
16 PLIP interactions:5 interactions with chain X, 10 interactions with chain U, 1 interactions with chain b- Hydrophobic interactions: X:V.30, X:P.39, X:A.41, X:Y.42, X:L.45, U:F.211, U:L.218, U:L.218, U:A.251, U:F.265, U:L.271, U:L.271, U:F.274, U:L.275, b:T.24
- Hydrogen bonds: U:F.265
PL9.160: 28 residues within 4Å:- Chain 4: L.23, V.26, L.27
- Chain 7: F.10
- Chain U: F.52, I.53, I.77
- Chain X: M.198, M.199, A.202, G.203, L.209, L.210, I.213, H.214, T.217, A.249, W.253, A.260, F.261, L.267, F.270, V.274
- Ligands: PHO.95, CLA.105, CLA.119, LHG.135, LHG.162
20 PLIP interactions:14 interactions with chain X, 2 interactions with chain 7, 1 interactions with chain 4, 3 interactions with chain U- Hydrophobic interactions: X:M.199, X:L.209, X:I.213, X:T.217, X:W.253, X:F.261, X:F.261, X:L.267, X:F.270, X:F.270, X:V.274, 7:F.10, 7:F.10, 4:L.23, U:F.52, U:I.53, U:I.77
- Hydrogen bonds: X:H.214, X:F.261
- pi-Stacking: X:F.261
- 9 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.12: 20 residues within 4Å:- Chain A: L.200, F.265, S.270, F.273, F.274, A.277, W.278
- Chain C: Q.16, A.22, W.23, W.24
- Chain D: F.232, R.233
- Chain J: L.33, A.34, F.37
- Ligands: CLA.50, LMG.61, LHG.70, BCR.86
13 PLIP interactions:5 interactions with chain J, 1 interactions with chain D, 4 interactions with chain A, 3 interactions with chain C- Hydrophobic interactions: J:L.33, J:A.34, J:F.37, J:F.37, J:F.37, A:F.265, A:F.273, A:A.277, C:W.23, C:W.24
- Salt bridges: D:R.233
- Hydrogen bonds: A:S.270, C:Q.16
SQD.14: 11 residues within 4Å:- Chain A: I.46, L.102, D.103, L.106
- Chain M: Q.135
- Chain V: W.75, S.76, E.94, L.98, V.102
- Ligands: BCR.10
10 PLIP interactions:6 interactions with chain V, 2 interactions with chain M, 2 interactions with chain A- Hydrophobic interactions: V:W.75, V:W.75, V:W.75, V:W.75, V:E.94, V:V.102, A:I.46, A:L.102
- Hydrogen bonds: M:Q.135
- Salt bridges: M:K.95
SQD.38: 17 residues within 4Å:- Chain B: R.224, A.228, R.230, L.474
- Chain D: F.15, D.16, D.19, K.23, W.32, L.36, F.130, R.134, L.135
- Chain G: M.34
- Ligands: CLA.24, CLA.25, UNL.37
6 PLIP interactions:4 interactions with chain D, 2 interactions with chain B- Hydrophobic interactions: D:L.36
- Hydrogen bonds: D:D.19, B:R.224
- Salt bridges: D:K.23, D:K.23, B:R.230
SQD.41: 16 residues within 4Å:- Chain 4: R.14, Y.18, L.21
- Chain 5: Y.26
- Chain 7: C.12, L.16, F.19, F.23
- Chain B: R.18, F.108, W.115
- Chain K: R.7
- Ligands: CLA.30, BCR.33, BCR.34, BCR.178
14 PLIP interactions:3 interactions with chain B, 1 interactions with chain K, 5 interactions with chain 4, 5 interactions with chain 7- Hydrophobic interactions: B:F.108, B:F.108, 4:Y.18, 4:L.21, 7:L.16, 7:L.16, 7:F.19, 7:F.19, 7:F.19
- Salt bridges: B:R.18, K:R.7, 4:R.14
- Hydrogen bonds: 4:R.14, 4:R.14
SQD.72: 12 residues within 4Å:- Chain D: R.24, R.26
- Chain E: E.7
- Chain F: F.16, T.17, V.18
- Chain R: T.24, L.28, I.31, D.35
- Chain T: L.34
- Ligands: PL9.11
10 PLIP interactions:3 interactions with chain D, 4 interactions with chain R, 1 interactions with chain T, 2 interactions with chain F- Hydrogen bonds: D:R.24, T:Q.30, F:V.18
- Salt bridges: D:R.24, D:R.26
- Hydrophobic interactions: R:L.28, R:I.31, F:V.18
- Water bridges: R:D.35, R:D.35
SQD.79: 9 residues within 4Å:- Chain A: I.96, L.102
- Chain H: M.1, T.3, L.4, T.7, F.15
- Ligands: CLA.9, BCR.10
5 PLIP interactions:2 interactions with chain A, 3 interactions with chain H- Hydrophobic interactions: A:I.96, A:L.102, H:L.4, H:T.7, H:F.15
SQD.100: 20 residues within 4Å:- Chain 3: A.34, F.37
- Chain U: L.200, A.203, F.265, N.267, S.270, F.273, F.274, W.278, V.281, G.282
- Chain W: Q.16, A.22, W.23, W.24
- Chain X: F.232, R.233
- Ligands: LHG.106, CLA.143
17 PLIP interactions:2 interactions with chain W, 8 interactions with chain U, 2 interactions with chain X, 5 interactions with chain 3- Hydrophobic interactions: W:W.23, U:L.200, U:A.203, U:F.265, U:F.274, U:W.278, U:W.278, 3:A.34, 3:F.37, 3:F.37, 3:F.37, 3:F.37
- Hydrogen bonds: W:Q.16, U:N.267, U:S.270
- Water bridges: X:R.233
- Salt bridges: X:R.233
SQD.107: 17 residues within 4Å:- Chain 4: N.4, R.7
- Chain K: R.14, Y.18, L.21
- Chain L: S.19, Y.26
- Chain N: C.12, F.19, F.23
- Chain V: R.18, A.28, L.29, S.104, W.115
- Ligands: UNL.83, CLA.126
11 PLIP interactions:1 interactions with chain L, 2 interactions with chain 4, 3 interactions with chain V, 2 interactions with chain N, 3 interactions with chain K- Hydrogen bonds: L:Y.26, 4:R.7, K:R.14
- Salt bridges: 4:R.7, V:R.18, K:R.14
- Hydrophobic interactions: V:A.28, V:L.29, N:F.19, N:F.19, K:L.21
SQD.167: 15 residues within 4Å:- Chain X: R.24, R.26
- Chain Y: E.7
- Chain Z: F.16, T.17, V.18, V.21
- Ligands: PL9.99, CLA.158
- Chain b: V.27, I.31, D.35
- Chain d: Q.30, V.31, L.34
8 PLIP interactions:3 interactions with chain Z, 2 interactions with chain d, 3 interactions with chain X- Hydrophobic interactions: Z:F.16, Z:V.21, d:V.31
- Hydrogen bonds: Z:V.18, d:Q.30, X:R.24, X:R.24
- Salt bridges: X:R.26
- 23 x UNL: UNKNOWN LIGAND(Non-functional Binders)
UNL.13: 2 residues within 4Å:- Chain A: R.16, W.20
Ligand excluded by PLIPUNL.16: 2 residues within 4Å:- Chain B: W.91
- Ligands: CLA.22
Ligand excluded by PLIPUNL.37: 4 residues within 4Å:- Chain B: L.225, A.228
- Chain D: F.15
- Ligands: SQD.38
Ligand excluded by PLIPUNL.39: 7 residues within 4Å:- Chain B: W.75, F.90
- Chain U: I.46, I.50
- Ligands: LMG.87, BCR.98, UNL.170
Ligand excluded by PLIPUNL.75: 2 residues within 4Å:- Chain G: I.9
- Ligands: CLA.31
Ligand excluded by PLIPUNL.78: 3 residues within 4Å:- Chain H: L.24, S.25, G.26
Ligand excluded by PLIPUNL.83: 3 residues within 4Å:- Ligands: SQD.107, CLA.126, UNL.175
Ligand excluded by PLIPUNL.84: 3 residues within 4Å:- Chain L: I.24, Q.28
- Ligands: CLA.30
Ligand excluded by PLIPUNL.102: 4 residues within 4Å:- Chain U: R.16, F.17
- Ligands: UNL.103, UNL.104
Ligand excluded by PLIPUNL.103: 5 residues within 4Å:- Chain U: R.16, W.20, S.23, N.26
- Ligands: UNL.102
Ligand excluded by PLIPUNL.104: 4 residues within 4Å:- Chain U: W.20
- Ligands: CLA.32, BCR.98, UNL.102
Ligand excluded by PLIPUNL.109: 3 residues within 4Å:- Chain 0: T.26, L.29
- Chain V: F.215
Ligand excluded by PLIPUNL.110: 1 residues within 4Å:- Chain V: I.211
Ligand excluded by PLIPUNL.111: 5 residues within 4Å:- Chain 5: L.6
- Chain L: L.8
- Chain N: I.4
- Chain V: Y.40
- Ligands: CLA.126
Ligand excluded by PLIPUNL.112: 6 residues within 4Å:- Chain N: M.1, I.4
- Chain V: Y.40, A.43, T.44
- Ligands: BCR.108
Ligand excluded by PLIPUNL.156: 10 residues within 4Å:- Chain X: W.93, Q.98, G.99
- Ligands: CLA.158
- Chain b: P.5, I.12, S.16, G.17, V.20, L.21
Ligand excluded by PLIPUNL.170: 6 residues within 4Å:- Chain 1: M.1, L.4
- Ligands: UNL.39, LMG.87, CLA.97, BCR.98
Ligand excluded by PLIPUNL.171: 3 residues within 4Å:- Chain 2: G.26, Y.33
- Ligands: DGD.152
Ligand excluded by PLIPUNL.174: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPUNL.175: 4 residues within 4Å:- Chain 5: Q.28
- Chain L: V.27
- Ligands: UNL.83, CLA.126
Ligand excluded by PLIPUNL.176: 4 residues within 4Å:- Chain 5: L.8, A.12
- Chain 7: T.5
- Ligands: CLA.30
Ligand excluded by PLIPUNL.177: 2 residues within 4Å:- Chain 7: F.10
- Ligands: BCR.34
Ligand excluded by PLIPUNL.180: 7 residues within 4Å:- Chain W: A.111, V.112, F.115
- Ligands: CLA.146
- Chain c: S.16, M.19, W.47
Ligand excluded by PLIP- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.15: 10 residues within 4Å:- Chain A: H.215, E.244, Y.246, H.272
- Chain D: H.214, V.218, Y.244, K.264, H.268
- Ligands: FE2.2
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:K.264
BCT.92: 9 residues within 4Å:- Chain U: H.215, V.219, E.244, Y.246, H.272
- Chain X: H.214, Y.244, H.268
- Ligands: FE2.89
1 PLIP interactions:1 interactions with chain X- Hydrogen bonds: X:Y.244
- 10 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.40: 17 residues within 4Å:- Chain A: S.232, N.234
- Chain B: W.5, Y.6, R.7, F.464, W.468
- Chain D: R.139, Y.141, I.144, F.269, F.273
- Chain L: F.14
- Ligands: CLA.23, CLA.27, CLA.29, LHG.81
11 PLIP interactions:1 interactions with chain A, 6 interactions with chain B, 1 interactions with chain L, 3 interactions with chain D- Hydrogen bonds: A:N.234, B:Y.6, D:R.139
- Hydrophobic interactions: B:W.5, B:W.5, B:Y.6, B:F.464, L:F.14, D:F.273, D:F.273
- Salt bridges: B:R.7
LHG.69: 21 residues within 4Å:- Chain A: M.37
- Chain D: I.256, F.257, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Chain K: N.13, T.15, Y.18, L.19
- Chain N: F.17, A.20, I.21
- Ligands: CLA.6, PHO.8, CLA.64, LHG.81
9 PLIP interactions:6 interactions with chain D, 2 interactions with chain K, 1 interactions with chain N- Hydrophobic interactions: D:F.257, D:F.261, D:F.270, K:Y.18, N:F.17
- Hydrogen bonds: D:S.262, D:S.262, D:N.263, K:N.13
LHG.70: 20 residues within 4Å:- Chain A: R.140, W.142, F.273, V.280, V.281, F.285
- Chain C: F.21, W.24, W.431, R.435
- Chain D: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.12, CLA.46, CLA.50, CLA.52
15 PLIP interactions:6 interactions with chain A, 5 interactions with chain C, 4 interactions with chain D- Hydrophobic interactions: A:F.273, A:F.273, A:V.280, A:V.281, A:F.285, C:W.24, C:W.24, C:W.431
- Salt bridges: A:R.140
- Hydrogen bonds: C:R.435, C:R.435, D:N.220, D:A.229, D:S.230, D:T.231
LHG.73: 13 residues within 4Å:- Chain A: Y.262, A.263, S.264, F.265, N.266
- Chain D: F.27, V.28, F.38, F.125
- Chain E: P.9, F.10, S.11
- Ligands: PL9.11
10 PLIP interactions:3 interactions with chain D, 4 interactions with chain A, 3 interactions with chain E- Hydrophobic interactions: D:V.28, D:F.38, D:F.125, A:A.263, A:F.265, A:F.265
- Hydrogen bonds: A:Y.262, E:F.10, E:S.11, E:S.11
LHG.81: 21 residues within 4Å:- Chain A: S.232, N.234
- Chain B: P.4, W.5, Y.6
- Chain D: W.266, F.273
- Chain K: E.11, L.12, N.13, S.16, G.20, L.22, L.23
- Chain L: F.21, L.22
- Ligands: CLA.27, LHG.40, PL9.68, LHG.69, LMG.82
14 PLIP interactions:2 interactions with chain L, 6 interactions with chain K, 2 interactions with chain D, 1 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: L:F.21, L:L.22, K:L.22, K:L.23, D:F.273, D:F.273
- Hydrogen bonds: K:E.11, K:E.11, K:N.13, K:S.16, B:W.5, A:S.232, A:S.232, A:N.234
LHG.106: 16 residues within 4Å:- Chain U: R.140, W.142, A.146, F.273
- Chain W: W.24, F.424, W.431, R.435
- Chain X: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.100, CLA.143
11 PLIP interactions:6 interactions with chain W, 3 interactions with chain X, 2 interactions with chain U- Hydrophobic interactions: W:W.24, W:W.24, W:F.424, W:W.431, U:A.146
- Hydrogen bonds: W:R.435, W:R.435, X:N.220, X:T.231, X:T.231
- Salt bridges: U:R.140
LHG.135: 22 residues within 4Å:- Chain 4: E.11, L.12, N.13, S.16, G.20, L.22
- Chain 5: P.18, F.21, L.22
- Chain U: S.232, N.234
- Chain V: P.4, W.5, Y.6
- Chain X: W.266, F.270, F.273
- Ligands: CLA.123, LMG.132, PL9.160, LHG.161, LHG.162
14 PLIP interactions:2 interactions with chain X, 5 interactions with chain 4, 3 interactions with chain U, 1 interactions with chain V, 3 interactions with chain 5- Hydrophobic interactions: X:F.270, X:F.273, 4:L.22, 5:P.18, 5:F.21, 5:L.22
- Hydrogen bonds: 4:E.11, 4:E.11, 4:N.13, 4:S.16, U:S.232, U:S.232, U:N.234, V:W.5
LHG.161: 19 residues within 4Å:- Chain 4: L.23
- Chain 5: F.14
- Chain U: S.232, N.234
- Chain V: Y.6, R.7, F.464, W.468
- Chain X: Y.141, W.266, F.269, L.272, F.273, T.277, M.281
- Ligands: CLA.119, CLA.123, CLA.125, LHG.135
9 PLIP interactions:2 interactions with chain X, 4 interactions with chain V, 1 interactions with chain U, 1 interactions with chain 5, 1 interactions with chain 4- Hydrophobic interactions: X:F.273, V:Y.6, V:F.464, 5:F.14, 4:L.23
- Hydrogen bonds: X:R.139, V:Y.6, U:N.234
- Salt bridges: V:R.7
LHG.162: 22 residues within 4Å:- Chain 4: N.13, T.15, S.16, Y.18, L.19, L.22
- Chain 7: F.17, A.20, I.21
- Chain X: I.256, F.257, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Ligands: CLA.93, CLA.105, LHG.135, PL9.160
14 PLIP interactions:6 interactions with chain X, 4 interactions with chain 4, 4 interactions with chain 7- Hydrophobic interactions: X:F.257, X:F.261, X:F.270, 4:Y.18, 4:L.22, 7:F.17, 7:F.17, 7:F.17, 7:I.21
- Hydrogen bonds: X:S.262, X:S.262, X:N.263, 4:N.13, 4:T.15
LHG.164: 10 residues within 4Å:- Chain U: L.258, I.259, F.260, Y.262
- Chain X: V.28
- Chain Y: P.9, F.10, S.11
- Ligands: CLA.94, PL9.99
8 PLIP interactions:3 interactions with chain Y, 4 interactions with chain U, 1 interactions with chain X- Hydrophobic interactions: Y:F.10, U:I.259, U:F.260, U:F.260, X:V.28
- Hydrogen bonds: Y:F.10, Y:S.11, U:Y.262
- 8 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.58: 26 residues within 4Å:- Chain A: L.91, A.152, F.155, I.160, I.163
- Chain C: P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, F.272, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, F.423
- Ligands: LMG.42
17 PLIP interactions:12 interactions with chain C, 5 interactions with chain A- Hydrophobic interactions: C:P.205, C:W.211, C:V.213, C:F.272, C:F.423, A:A.152, A:F.155, A:F.155, A:I.160, A:I.163
- Hydrogen bonds: C:G.208, C:N.282, C:T.283, C:T.283, C:D.348, C:R.350, C:R.350
DGD.59: 16 residues within 4Å:- Chain A: F.197
- Chain C: E.71, Q.72, G.73, S.394, N.406, F.407, V.408, W.413, T.416, S.417
- Chain I: Y.33
- Ligands: CLA.46, CLA.50, DGD.60, LMG.61
8 PLIP interactions:1 interactions with chain A, 7 interactions with chain C- Hydrophobic interactions: A:F.197, C:W.413
- Hydrogen bonds: C:S.394, C:N.406, C:N.406, C:V.408, C:V.408, C:W.413
DGD.60: 27 residues within 4Å:- Chain A: P.196, Q.199, L.200, A.203, W.278, F.300, N.301, F.302, S.305
- Chain C: N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain I: F.29, A.32, Y.33, G.37, S.38, S.39
- Chain P: Q.60
- Ligands: CLA.7, CLA.46, DGD.59, LMG.71
12 PLIP interactions:4 interactions with chain C, 1 interactions with chain I, 1 interactions with chain P, 6 interactions with chain A- Hydrogen bonds: C:N.393, C:N.403, C:S.404, C:V.405, I:G.37, P:Q.60, A:S.305
- Hydrophobic interactions: A:P.196, A:L.200, A:A.203, A:W.278, A:F.300
DGD.77: 23 residues within 4Å:- Chain B: Y.193, F.250, A.253, G.254, Y.258, Y.273, Q.274, S.277, Y.279, F.463
- Chain D: H.87, I.123, V.154, I.159, L.162
- Chain G: L.45, Y.48, N.49, V.59, S.60, W.61
- Ligands: CLA.18, CLA.24
20 PLIP interactions:7 interactions with chain B, 5 interactions with chain G, 8 interactions with chain D- Hydrophobic interactions: B:Y.258, B:F.463, G:Y.48, G:Y.48, G:Y.48, D:I.123, D:V.154, D:I.159, D:L.162, D:L.162
- Hydrogen bonds: B:Y.193, B:Y.193, B:Y.258, B:S.277, B:S.277, G:V.59, G:S.60, D:H.87, D:H.87
- Salt bridges: D:H.87
DGD.151: 28 residues within 4Å:- Chain U: L.91, A.152, F.155, I.160, I.163
- Chain W: P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, L.426
- Ligands: LMG.101, CLA.140, CLA.141
18 PLIP interactions:6 interactions with chain U, 12 interactions with chain W- Hydrophobic interactions: U:A.152, U:F.155, U:F.155, U:F.155, U:I.160, U:I.163, W:F.206, W:W.211, W:V.213, W:L.426
- Hydrogen bonds: W:G.208, W:N.282, W:T.283, W:T.283, W:T.283, W:D.348, W:R.350, W:R.350
DGD.152: 18 residues within 4Å:- Chain 2: Y.33
- Chain U: F.197
- Chain W: Y.70, E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416
- Ligands: CLA.139, CLA.143, DGD.153, LMG.154, UNL.171
11 PLIP interactions:10 interactions with chain W, 1 interactions with chain U- Hydrophobic interactions: W:L.392, W:W.413, U:F.197
- Hydrogen bonds: W:E.71, W:S.394, W:N.406, W:N.406, W:V.408, W:V.408, W:W.413
- Water bridges: W:G.73
DGD.153: 27 residues within 4Å:- Chain 2: F.29, A.32, Y.33, G.37, S.38, S.39, L.40
- Chain 9: Q.60
- Chain U: Q.199, L.200, A.203, W.278, F.300, N.301, F.302, S.305
- Chain W: N.393, S.394, V.395, N.403, S.404, N.406
- Chain X: N.72, L.74
- Ligands: CLA.94, DGD.152, LMG.166
16 PLIP interactions:2 interactions with chain 2, 8 interactions with chain U, 1 interactions with chain 9, 3 interactions with chain W, 2 interactions with chain X- Hydrophobic interactions: 2:F.29, U:Q.199, U:L.200, U:A.203, U:W.278, U:F.300, U:F.300, X:L.74, X:L.74
- Hydrogen bonds: 2:G.37, U:S.305, U:S.305, 9:Q.60, W:N.393, W:S.404, W:S.404
DGD.169: 22 residues within 4Å:- Chain 0: L.45, Y.48, N.49, V.59, S.60, W.61
- Chain V: Y.193, F.250, G.254, Y.258, Y.273, Q.274, Y.279, T.452
- Chain X: G.86, H.87, I.159, L.162, G.163, L.291
- Ligands: CLA.114, CLA.120
14 PLIP interactions:5 interactions with chain X, 6 interactions with chain 0, 3 interactions with chain V- Hydrophobic interactions: X:L.162, X:L.291, 0:Y.48, 0:Y.48, V:Y.258, V:T.452
- Hydrogen bonds: X:H.87, X:H.87, 0:N.49, 0:V.59, 0:S.60, 0:W.61, V:Y.258
- Salt bridges: X:H.87
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.74: 16 residues within 4Å:- Chain E: F.10, I.13, R.18, Y.19, I.22, H.23, T.26, L.30
- Chain F: R.19, W.20, V.23, H.24, A.27, V.28, I.31
- Chain T: A.19
17 PLIP interactions:1 interactions with chain T, 8 interactions with chain F, 8 interactions with chain E,- Hydrophobic interactions: T:A.19, F:W.20, F:V.23, F:A.27, F:I.31, E:F.10, E:I.13, E:I.22, E:L.30
- Salt bridges: F:R.19, E:R.18
- pi-Stacking: F:W.20, F:W.20, E:Y.19
- Metal complexes: F:H.24, E:H.23
- pi-Cation interactions: E:H.23
HEM.165: 19 residues within 4Å:- Chain Y: R.8, F.10, I.13, R.18, Y.19, H.23, T.26, L.30
- Chain Z: I.15, R.19, W.20, V.23, H.24, A.27, V.28, I.31
- Chain d: A.16, A.19, I.23
19 PLIP interactions:7 interactions with chain Y, 10 interactions with chain Z, 2 interactions with chain d,- Hydrophobic interactions: Y:F.10, Y:I.13, Y:T.26, Z:I.15, Z:W.20, Z:V.23, Z:A.27, Z:I.31, d:A.19, d:I.23
- Salt bridges: Y:R.8, Y:R.18, Z:R.19
- pi-Stacking: Y:Y.19, Z:W.20, Z:W.20, Z:H.24
- Metal complexes: Y:H.23, Z:H.24
- 2 x HEC: HEME C(Covalent)
HEC.85: 20 residues within 4Å:- Chain P: A.62, C.63, S.65, C.66, H.67, T.72, T.74, L.78, D.79, L.80, T.84, L.85, L.98, Y.101, M.102, Y.108, I.114, H.118, P.119, I.145
14 PLIP interactions:14 interactions with chain P,- Hydrophobic interactions: P:T.72, P:T.74, P:L.78, P:L.80, P:L.85, P:L.98, P:Y.101, P:I.114, P:P.119, P:I.145
- Hydrogen bonds: P:D.79
- pi-Stacking: P:Y.101
- Metal complexes: P:H.67, P:H.118
HEC.179: 20 residues within 4Å:- Chain 9: A.62, C.63, C.66, H.67, T.72, T.74, L.78, D.79, L.80, T.84, L.85, L.98, Y.101, M.102, Y.108, I.114, H.118, P.119, I.141, I.145
14 PLIP interactions:14 interactions with chain 9,- Hydrophobic interactions: 9:A.62, 9:T.72, 9:T.74, 9:L.80, 9:L.98, 9:Y.101, 9:I.114, 9:P.119, 9:I.141, 9:I.145
- Hydrogen bonds: 9:D.79
- pi-Stacking: 9:Y.101
- Metal complexes: 9:H.67, 9:H.118
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Young, I.D. et al., Structure of photosystem II and substrate binding at room temperature. Nature (2016)
- Release Date
- 2016-11-23
- Peptides
- Photosystem II protein D1 1: AU
Photosystem II CP47 reaction center protein: BV
Photosystem II CP43 reaction center protein: CW
Photosystem II D2 protein: DX
Cytochrome b559 subunit alpha: EY
Cytochrome b559 subunit beta: FZ
Photosystem II reaction center protein H: G0
Photosystem II reaction center protein I: H1
Photosystem II reaction center protein J: I2
Photosystem II reaction center protein K: J3
Photosystem II reaction center protein L: K4
Photosystem II reaction center protein M: L5
Photosystem II manganese-stabilizing polypeptide: M6
Photosystem II reaction center protein T: N7
Photosystem II 12 kDa extrinsic protein: O8
Cytochrome c-550: P9
Photosystem II reaction center protein Ycf12: Qa
Photosystem II reaction center X protein: Rb
Photosystem II reaction center protein Z: Sc
Photosystem II protein Y: Td - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AU
aB
BV
bC
CW
cD
DX
dE
EY
eF
FZ
fG
H0
hH
I1
iI
J2
jJ
K3
kK
L4
lL
M5
mM
O6
oN
T7
tO
U8
uP
V9
vQ
Ya
yR
Xb
xS
Zc
zT
Rd
r - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 5kai.1
NH3-bound RT XFEL structure of Photosystem II 500 ms after the 2nd illumination (2F) at 2.8 A resolution
Photosystem II protein D1 1
Toggle Identical (AU)Photosystem II CP47 reaction center protein
Toggle Identical (BV)Photosystem II CP43 reaction center protein
Toggle Identical (CW)Photosystem II D2 protein
Toggle Identical (DX)Cytochrome b559 subunit alpha
Cytochrome b559 subunit beta
Toggle Identical (FZ)Photosystem II reaction center protein H
Toggle Identical (G0)Photosystem II reaction center protein I
Toggle Identical (H1)Photosystem II reaction center protein J
Toggle Identical (I2)Photosystem II reaction center protein K
Toggle Identical (J3)Photosystem II reaction center protein L
Toggle Identical (K4)Photosystem II reaction center protein M
Toggle Identical (L5)Photosystem II manganese-stabilizing polypeptide
Toggle Identical (M6)Photosystem II reaction center protein T
Toggle Identical (N7)Photosystem II 12 kDa extrinsic protein
Toggle Identical (O8)Cytochrome c-550
Toggle Identical (P9)Photosystem II reaction center protein Ycf12
Photosystem II reaction center X protein
Toggle Identical (Rb)Photosystem II reaction center protein Z
Toggle Identical (Sc)Photosystem II protein Y
Toggle Identical (Td)Related Entries With Identical Sequence
1izl.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1 more...less...5e79.1 | 5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kaf.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1 | 9evx.1