- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 2 x OEX: CA-MN4-O5 CLUSTER(Covalent)
- 2 x FE2: FE (II) ION(Non-covalent)
FE2.2: 5 residues within 4Å:- Chain A: H.205, H.262
- Chain D: H.204, H.258
- Ligands: BCT.67
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain D- Metal complexes: A:H.205, A:H.262, D:H.204, D:H.258
FE2.101: 5 residues within 4Å:- Chain U: H.205, H.262
- Chain X: H.204, H.258
- Ligands: BCT.165
4 PLIP interactions:2 interactions with chain U, 2 interactions with chain X- Metal complexes: U:H.205, U:H.262, X:H.204, X:H.258
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 4 residues within 4Å:- Chain A: N.171, H.322, E.323
- Chain D: K.307
Ligand excluded by PLIPCL.4: 6 residues within 4Å:- Chain A: A.326, H.327, N.328, F.329
- Chain C: G.331, E.332
Ligand excluded by PLIPCL.102: 4 residues within 4Å:- Chain U: N.171, H.322, E.323
- Chain X: K.307
Ligand excluded by PLIPCL.103: 6 residues within 4Å:- Chain U: A.326, H.327, N.328, F.329
- Chain W: G.331, E.332
Ligand excluded by PLIP- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.5: 30 residues within 4Å:- Chain A: F.109, Y.137, P.140, S.143, V.147, F.172, M.173, I.174, F.176, Q.177, I.182, L.183, H.188, G.191, V.192, V.195, F.196, V.273, A.276, A.277, I.280
- Chain D: L.172, L.195, F.247
- Chain N: F.17
- Ligands: CLA.6, PHO.7, CLA.65, CLA.68, LHG.73
19 PLIP interactions:15 interactions with chain A, 1 interactions with chain N, 3 interactions with chain D,- Hydrophobic interactions: A:F.109, A:F.172, A:F.176, A:Q.177, A:I.182, A:I.182, A:L.183, A:V.192, A:V.195, A:V.195, A:F.196, A:F.196, A:I.280, N:F.17, D:L.172, D:L.195, D:F.247
- Water bridges: A:I.280
- Metal complexes: A:H.188
CLA.6: 19 residues within 4Å:- Chain A: Q.189, V.192, A.193, F.196, G.197, L.200, W.268
- Chain D: F.147, V.165, I.168, F.169, F.171, L.172
- Ligands: CLA.5, PL9.11, DGD.59, PHO.66, CLA.68, LMG.75
13 PLIP interactions:6 interactions with chain D, 6 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: D:F.147, D:F.147, D:I.168, D:F.171, D:L.172, D:L.172, A:V.192, A:F.196, A:L.200, A:W.268
- Water bridges: A:H.188
- pi-Stacking: A:F.196
- Metal complexes: H2O.5
CLA.8: 28 residues within 4Å:- Chain A: V.25, I.26, P.29, T.30, F.83, Y.84, P.85, I.86, W.87, Q.103, L.104, F.107, H.108, L.111
- Chain H: V.8, Y.9, V.11, V.12, T.13, F.15, V.16, F.19
- Ligands: BCR.9, LMG.41, CLA.46, CLA.47, DGD.57, UNL.83
23 PLIP interactions:14 interactions with chain A, 9 interactions with chain H,- Hydrophobic interactions: A:I.26, A:P.29, A:P.29, A:T.30, A:F.83, A:P.85, A:I.86, A:W.87, A:W.87, A:L.104, A:L.111, H:Y.9, H:V.11, H:V.12, H:V.12, H:T.13, H:F.15, H:F.15, H:V.16, H:F.19
- Hydrogen bonds: A:I.86
- Salt bridges: A:H.108
- Metal complexes: A:H.108
CLA.15: 10 residues within 4Å:- Chain B: W.184, G.185, P.186, F.189
- Chain G: F.40, I.43, I.47, L.54
- Ligands: CLA.16, RRX.97
10 PLIP interactions:4 interactions with chain B, 5 interactions with chain G, 1 Ligand-Water interactions,- Hydrophobic interactions: B:W.184, B:P.186, B:F.189, B:F.189, G:F.40, G:F.40, G:I.43, G:I.47, G:L.54
- Metal complexes: H2O.13
CLA.16: 30 residues within 4Å:- Chain B: E.183, G.188, F.189, P.191, G.196, A.199, H.200, A.203, A.204, V.207, F.245, F.246, F.249, V.250, T.254
- Chain D: V.144, L.148, I.149, L.152
- Chain G: F.37, F.40, I.44, L.45, Y.48
- Ligands: CLA.15, CLA.17, CLA.19, CLA.23, DGD.82, RRX.97
21 PLIP interactions:15 interactions with chain B, 4 interactions with chain D, 2 interactions with chain G,- Hydrophobic interactions: B:F.189, B:F.189, B:P.191, B:A.199, B:H.200, B:A.204, B:V.207, B:F.245, B:F.246, B:F.246, B:F.249, B:F.249, D:V.144, D:L.148, D:I.149, D:L.152, G:F.37, G:I.44
- Water bridges: B:S.259
- pi-Stacking: B:F.189
- Metal complexes: B:H.200
CLA.17: 28 residues within 4Å:- Chain B: R.67, L.68, A.145, L.148, C.149, F.152, L.157, M.165, V.197, H.200, H.201, A.243, F.246, A.247, V.250, V.251, T.261
- Chain G: M.34, F.37, L.38
- Ligands: CLA.16, CLA.18, CLA.19, CLA.20, CLA.22, CLA.23, CLA.24, RRX.97
17 PLIP interactions:16 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: B:L.68, B:L.148, B:L.148, B:F.152, B:F.152, B:F.152, B:A.243, B:F.246, B:F.246, B:A.247, B:V.250, B:V.251, G:L.38
- Hydrogen bonds: B:R.67
- Salt bridges: B:R.67
- pi-Cation interactions: B:H.200
- Metal complexes: B:H.201
CLA.18: 26 residues within 4Å:- Chain B: W.32, F.60, F.64, R.67, L.144, L.147, L.148, V.244, A.247, A.248, V.251, F.450, H.454, F.457, A.458, F.461
- Ligands: CLA.17, CLA.19, CLA.20, CLA.21, CLA.25, CLA.26, CLA.27, CLA.29, CLA.30, BCR.32
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:W.32, B:F.60, B:F.64, B:F.64, B:L.147, B:L.148, B:V.244, B:A.247, B:V.251, B:F.457, B:F.457, B:F.461, B:F.461
- Salt bridges: B:R.67
- Metal complexes: B:H.454
CLA.19: 28 residues within 4Å:- Chain B: T.26, V.29, A.30, W.32, A.33, A.37, V.61, F.64, M.65, R.67, L.68, V.95, H.99, L.102, L.142, A.145, A.204, G.208
- Ligands: CLA.16, CLA.17, CLA.18, CLA.20, CLA.23, CLA.24, CLA.26, CLA.29, BCR.33, UNL.37
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:T.26, B:V.29, B:W.32, B:A.33, B:L.68, B:V.95, B:L.102, B:L.142, B:A.145
- Water bridges: B:R.67
- Salt bridges: B:R.67
- Metal complexes: B:H.99
CLA.20: 24 residues within 4Å:- Chain B: L.68, G.69, V.70, F.89, W.90, V.95, A.98, H.99, V.101, L.102, L.105, L.148, G.151, F.152, F.155, H.156, F.161, G.162, P.163
- Ligands: CLA.17, CLA.18, CLA.19, BCR.33, UNL.37
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:L.68, B:V.70, B:F.89, B:F.89, B:W.90, B:W.90, B:W.90, B:A.98, B:V.101, B:L.102, B:L.105, B:L.148, B:F.155, B:F.161, B:F.161
- Metal complexes: B:H.156
CLA.21: 28 residues within 4Å:- Chain B: W.32, M.36, Y.39, Q.57, G.58, M.59, F.60, L.323, F.324, T.326, G.327, P.328, W.449, F.450, A.453, H.454
- Chain D: T.267, M.271
- Chain K: F.31
- Chain L: F.14
- Ligands: CLA.18, CLA.27, BCR.31, BCR.32, LMG.35, PL9.71, LHG.72, BCR.192
15 PLIP interactions:2 interactions with chain K, 10 interactions with chain B, 1 interactions with chain D, 1 interactions with chain L, 1 Ligand-Water interactions,- Hydrophobic interactions: K:F.31, K:F.31, B:Y.39, B:F.60, B:F.60, B:F.324, B:T.326, B:W.449, B:W.449, B:W.449, D:T.267, L:F.14
- Hydrogen bonds: B:G.327
- pi-Stacking: B:F.60
- Metal complexes: H2O.15
CLA.22: 25 residues within 4Å:- Chain B: T.235, S.238, S.239, A.242, F.245, F.246, F.462, H.465, I.466, G.469, T.472, L.473
- Chain D: F.110, I.113, M.116, L.117, I.140
- Chain G: L.38, L.42
- Ligands: CLA.17, CLA.23, CLA.24, CLA.69, UNL.76, DGD.82
16 PLIP interactions:7 interactions with chain D, 8 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: D:F.110, D:F.110, D:F.110, D:I.113, D:M.116, D:L.117, D:I.140, B:A.242, B:F.246, B:F.462, B:F.462, B:L.473, G:L.38
- Hydrogen bonds: B:S.238
- pi-Stacking: B:F.245
- Metal complexes: B:H.465
CLA.23: 28 residues within 4Å:- Chain B: F.138, V.207, A.211, F.214, H.215, V.218, R.219, P.220, P.221, L.224, L.228, M.230
- Chain D: F.110
- Chain G: T.26, T.27, L.29, M.30, F.33, M.34, L.38, L.41
- Ligands: CLA.16, CLA.17, CLA.19, CLA.22, CLA.24, UNL.76, RRX.97
19 PLIP interactions:12 interactions with chain B, 6 interactions with chain G, 1 interactions with chain D,- Hydrophobic interactions: B:F.138, B:F.138, B:F.138, B:V.207, B:A.211, B:F.214, B:F.214, B:L.224, B:L.228, B:L.228, G:L.29, G:M.30, G:F.33, G:L.38, G:L.41, D:F.110
- Salt bridges: B:H.215
- Metal complexes: B:H.215
- Hydrogen bonds: G:T.26
CLA.24: 22 residues within 4Å:- Chain B: H.22, L.134, M.137, F.138, H.141, L.142, A.145, L.228, M.230, I.233, T.235, V.236, S.239, S.240, A.243
- Ligands: CLA.17, CLA.19, CLA.22, CLA.23, CLA.26, CLA.29, RRX.97
8 PLIP interactions:7 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:L.134, B:M.137, B:F.138, B:L.228, B:M.230, B:I.233, B:T.235
- Metal complexes: H2O.11
CLA.25: 23 residues within 4Å:- Chain B: W.4, Y.5, R.6, V.7, H.8, T.9, L.237, I.241, L.460, F.461, F.463, G.464, W.467, H.468, R.471, F.478
- Chain L: F.21
- Ligands: CLA.18, CLA.26, CLA.27, CLA.28, LHG.72, LHG.90
18 PLIP interactions:17 interactions with chain B, 1 interactions with chain L,- Hydrophobic interactions: B:W.4, B:W.4, B:H.8, B:T.9, B:L.237, B:L.237, B:I.241, B:F.461, B:F.461, B:F.463, B:W.467, L:F.21
- Hydrogen bonds: B:H.8
- Salt bridges: B:H.8, B:H.468, B:R.471
- pi-Stacking: B:W.467
- Metal complexes: B:H.468
CLA.26: 21 residues within 4Å:- Chain B: H.8, L.11, I.12, L.18, A.21, H.22, H.25, T.26, I.233, V.236, L.237, S.240, I.241, V.244
- Ligands: CLA.18, CLA.19, CLA.24, CLA.25, CLA.27, CLA.28, CLA.29
17 PLIP interactions:17 interactions with chain B,- Hydrophobic interactions: B:H.8, B:L.11, B:L.11, B:I.12, B:L.18, B:A.21, B:H.22, B:H.25, B:T.26, B:I.233, B:V.236, B:L.237, B:V.244
- Hydrogen bonds: B:S.240
- Salt bridges: B:H.22
- pi-Stacking: B:H.25
- Metal complexes: B:H.22
CLA.27: 14 residues within 4Å:- Chain B: H.8, H.25, V.29, W.32, F.461
- Ligands: CLA.18, CLA.21, CLA.25, CLA.26, CLA.28, BCR.31, BCR.32, LMG.35, LHG.72
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:V.29, B:V.29, B:W.32, B:W.32, B:F.461, B:F.461
- Salt bridges: B:H.8, B:H.8
- Metal complexes: B:H.25
CLA.28: 25 residues within 4Å:- Chain 7: F.8, C.12
- Chain B: L.2, V.7, H.8, V.10, L.11, A.21, M.24, L.28, W.114
- Chain K: Q.8, V.10
- Chain L: F.21, L.25
- Ligands: CLA.25, CLA.26, CLA.27, BCR.31, SQD.34, LMG.35, LHG.90, UNL.189, LMT.190, BCR.192
10 PLIP interactions:6 interactions with chain B, 2 interactions with chain L, 2 interactions with chain 7,- Hydrophobic interactions: B:V.7, B:L.11, B:M.24, B:L.28, B:W.114, L:F.21, L:L.25, 7:F.8, 7:F.8
- Metal complexes: B:H.8
CLA.29: 20 residues within 4Å:- Chain B: I.19, H.22, L.23, T.26, F.122, L.132, M.137, I.140, H.141, L.144
- Chain G: L.6, L.10, L.13, N.14
- Ligands: CLA.18, CLA.19, CLA.24, CLA.26, CLA.30, BCR.33
10 PLIP interactions:5 interactions with chain B, 5 interactions with chain G,- Hydrophobic interactions: B:I.19, B:F.122, B:L.132, B:L.144, G:L.6, G:L.10, G:L.10, G:L.13, G:L.13
- Metal complexes: B:H.141
CLA.30: 17 residues within 4Å:- Chain B: I.19, L.23, L.106, A.109, W.112, H.113, L.119, L.121, F.122
- Chain G: T.4, L.6, G.7, L.10
- Ligands: CLA.18, CLA.29, BCR.33, SQD.111
13 PLIP interactions:10 interactions with chain B, 3 interactions with chain G,- Hydrophobic interactions: B:I.19, B:L.23, B:L.106, B:W.112, B:W.112, B:L.119, B:L.121, B:F.122, G:L.6, G:L.10
- pi-Stacking: B:W.112
- Metal complexes: B:H.113
- Water bridges: G:L.6
CLA.42: 22 residues within 4Å:- Chain C: T.72, L.73, L.146, G.149, A.150, L.153, W.201, I.202, V.211, H.215, I.218, A.256, M.260, I.263, F.267, V.274, Y.275
- Ligands: CLA.43, CLA.44, CLA.47, CLA.48, BCR.56
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:A.150, C:L.153, C:W.201, C:I.202, C:I.218, C:I.218, C:I.218, C:A.256, C:M.260, C:I.263, C:F.267, C:V.274
- Metal complexes: C:H.215
CLA.43: 26 residues within 4Å:- Chain C: W.41, I.65, L.66, H.69, L.73, W.75, G.149, L.152, K.156, F.160, L.257, M.260, A.264, V.268, Y.275, L.404, H.408, L.411, A.412, F.415
- Ligands: CLA.42, CLA.44, CLA.45, CLA.51, CLA.53, LMG.60
21 PLIP interactions:21 interactions with chain C,- Hydrophobic interactions: C:W.41, C:W.41, C:I.65, C:L.66, C:L.73, C:W.75, C:L.152, C:K.156, C:K.156, C:F.160, C:L.257, C:M.260, C:A.264, C:L.404, C:L.411, C:L.411, C:F.415
- Hydrogen bonds: C:Y.275
- Salt bridges: C:H.69, C:H.408
- Metal complexes: C:H.408
CLA.44: 20 residues within 4Å:- Chain C: I.38, V.39, A.42, T.46, L.66, H.69, I.70, L.73, W.75, V.92, H.96, M.260
- Ligands: CLA.42, CLA.43, CLA.48, CLA.50, CLA.51, CLA.53, CLA.54, LMG.63
8 PLIP interactions:8 interactions with chain C,- Hydrophobic interactions: C:I.38, C:V.39, C:A.42, C:L.73, C:W.75, C:V.92
- Salt bridges: C:H.69
- Metal complexes: C:H.96
CLA.45: 21 residues within 4Å:- Chain C: W.41, M.45, F.48, Q.62, G.63, I.65, W.403, L.404, S.407, H.408, V.410, F.414
- Chain J: P.17, V.21
- Ligands: CLA.43, CLA.49, CLA.51, DGD.58, DGD.59, LMG.60, LHG.74
15 PLIP interactions:13 interactions with chain C, 1 interactions with chain J, 1 Ligand-Water interactions,- Hydrophobic interactions: C:W.41, C:F.48, C:I.65, C:I.65, C:W.403, C:W.403, C:W.403, C:L.404, C:V.410, C:F.414, C:F.414, C:F.414, J:V.21
- pi-Stacking: C:W.403
- Metal complexes: H2O.24
CLA.46: 26 residues within 4Å:- Chain A: F.23, I.26, L.111, S.114, C.115, M.117, G.118, W.121
- Chain C: F.242, S.251, Y.252, G.255, A.256, L.416, H.419, L.420, A.423, R.427
- Chain H: V.16, F.19, F.23
- Ligands: CLA.8, LMG.41, CLA.48, BCR.56, DGD.57
18 PLIP interactions:8 interactions with chain A, 8 interactions with chain C, 2 interactions with chain H,- Hydrophobic interactions: A:F.23, A:I.26, A:L.111, A:L.111, A:W.121, A:W.121, A:W.121, C:F.242, C:Y.252, C:Y.252, C:L.416, H:F.19, H:F.23
- pi-Stacking: A:W.121
- Water bridges: C:I.243, C:I.243
- Salt bridges: C:R.427
- Metal complexes: C:H.419
CLA.47: 18 residues within 4Å:- Chain C: L.139, L.143, L.191, I.221, G.225, W.228, H.229, T.232, T.233, P.234, F.235, W.237, A.238, F.242
- Ligands: CLA.8, CLA.42, CLA.48, BCR.56
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:L.139, C:L.143, C:L.143, C:L.191, C:W.228, C:W.237, C:F.242
- Hydrogen bonds: C:F.235
- Salt bridges: C:H.229
- Metal complexes: C:H.229
CLA.48: 22 residues within 4Å:- Chain C: M.135, T.136, L.139, H.142, L.143, L.146, C.222, W.237, F.242, W.244, Y.249, Y.252, S.253, A.256, L.257, M.260
- Ligands: CLA.42, CLA.44, CLA.46, CLA.47, CLA.50, BCR.56
18 PLIP interactions:17 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:M.135, C:T.136, C:L.139, C:L.139, C:L.146, C:W.237, C:F.242, C:W.244, C:W.244, C:Y.249, C:Y.249, C:Y.252, C:Y.252, C:Y.252, C:A.256, C:L.257
- Salt bridges: C:H.142
- Metal complexes: H2O.19
CLA.49: 26 residues within 4Å:- Chain C: F.11, W.14, A.15, G.16, N.17, A.18, E.247, L.250, L.254, F.414, F.415, V.417, G.418, W.421, H.422, R.425
- Chain J: V.21, L.24, F.28
- Ligands: CLA.45, CLA.50, CLA.51, CLA.52, DGD.59, LMG.60, LHG.74
12 PLIP interactions:3 interactions with chain J, 9 interactions with chain C,- Hydrophobic interactions: J:V.21, J:L.24, J:F.28, C:L.254, C:F.415, C:V.417, C:W.421
- Hydrogen bonds: C:N.17
- Salt bridges: C:H.422, C:R.425
- pi-Stacking: C:W.421
- Metal complexes: C:H.422
CLA.50: 26 residues within 4Å:- Chain C: N.17, L.20, I.21, L.27, A.30, H.31, H.34, Y.127, W.129, M.135, I.138, H.142, L.146, G.246, E.247, Y.249, L.250, S.253, L.254, L.257
- Ligands: CLA.44, CLA.48, CLA.49, CLA.51, CLA.52, CLA.53
18 PLIP interactions:18 interactions with chain C,- Hydrophobic interactions: C:N.17, C:L.20, C:I.21, C:L.27, C:A.30, C:H.34, C:Y.127, C:W.129, C:W.129, C:W.129, C:I.138, C:I.138, C:L.146, C:Y.249, C:L.250
- Hydrogen bonds: C:S.253
- pi-Stacking: C:H.31
- Metal complexes: C:H.31
CLA.51: 19 residues within 4Å:- Chain C: N.17, H.34, L.37, I.38, W.41, L.257, F.414, F.415
- Chain J: P.20, V.21, F.23, L.24
- Ligands: CLA.43, CLA.44, CLA.45, CLA.49, CLA.50, CLA.52, LHG.74
14 PLIP interactions:9 interactions with chain C, 5 interactions with chain J,- Hydrophobic interactions: C:L.37, C:I.38, C:W.41, C:L.257, C:F.414, C:F.415, C:F.415, J:P.20, J:V.21, J:F.23, J:L.24, J:L.24
- Hydrogen bonds: C:N.17
- Metal complexes: C:H.34
CLA.52: 36 residues within 4Å:- Chain C: T.2, N.3, R.4, W.13, G.16, N.17, R.19, L.20, L.23, K.26, A.30, H.34, L.37, A.101, G.104, F.105, A.111, I.112
- Chain J: F.23, L.24, A.27, W.30, Q.31
- Chain Q: I.19, I.20, L.23, N.29, L.30
- Chain S: M.19, V.20, P.24, A.28
- Ligands: CLA.49, CLA.50, CLA.51, BCR.62
21 PLIP interactions:5 interactions with chain Q, 6 interactions with chain C, 7 interactions with chain J, 3 interactions with chain S,- Hydrophobic interactions: Q:I.19, Q:I.19, Q:I.20, Q:L.23, Q:L.30, C:A.30, C:L.37, C:F.105, C:A.111, J:F.23, J:L.24, J:A.27, J:W.30, S:V.20, S:P.24, S:A.28
- Hydrogen bonds: C:R.19
- Salt bridges: C:R.4
- Water bridges: J:Q.31
- pi-Stacking: J:W.30, J:W.30
CLA.53: 18 residues within 4Å:- Chain C: H.31, A.35, L.103, L.118, F.124, F.125, Y.127, I.138, F.141, H.142, V.145, L.146, G.149
- Ligands: CLA.43, CLA.44, CLA.50, CLA.54, BCR.55
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:H.31, C:L.118, C:F.124, C:F.125, C:Y.127, C:I.138, C:F.141, C:F.141, C:F.141
- Metal complexes: C:H.142
CLA.54: 17 residues within 4Å:- Chain C: L.28, V.32, V.102, L.103, G.106, Y.109, H.110, P.115, L.118, Y.121, F.125
- Ligands: CLA.44, CLA.53, BCR.55, LMG.63, UNL.64, LMT.99
15 PLIP interactions:15 interactions with chain C,- Hydrophobic interactions: C:L.28, C:L.28, C:V.32, C:V.32, C:V.102, C:L.103, C:L.118, C:Y.121, C:F.125, C:F.125, C:F.125
- Salt bridges: C:H.110
- pi-Stacking: C:Y.109, C:F.125
- Metal complexes: C:H.110
CLA.65: 25 residues within 4Å:- Chain A: T.35, F.38, V.39, V.147, M.162, I.166, T.169, F.170, F.172, M.173
- Chain D: M.188, V.191, A.192, L.195, G.196, L.199
- Chain K: L.30
- Chain N: F.10
- Ligands: CLA.5, PHO.7, SQD.12, CLA.68, PL9.71, LHG.73, LHG.90
10 PLIP interactions:6 interactions with chain A, 2 interactions with chain D, 1 interactions with chain N, 1 Ligand-Water interactions,- Hydrophobic interactions: A:T.35, A:F.38, A:V.39, A:V.147, A:F.170, A:F.172, D:V.191, D:L.199, N:F.10
- Metal complexes: H2O.5
CLA.68: 26 residues within 4Å:- Chain A: M.173, F.196
- Chain D: L.112, P.139, V.142, S.145, V.146, F.171, L.172, F.175, Q.176, W.181, T.182, H.187, G.190, V.191, V.194, L.195, L.269, S.272, A.273, V.276
- Ligands: CLA.5, CLA.6, CLA.65, PHO.66
15 PLIP interactions:15 interactions with chain D,- Hydrophobic interactions: D:L.112, D:V.142, D:F.171, D:F.175, D:Q.176, D:T.182, D:V.191, D:V.191, D:V.194, D:V.194, D:L.195, D:L.195, D:L.269
- pi-Stacking: D:W.181
- Metal complexes: D:H.187
CLA.69: 26 residues within 4Å:- Chain D: I.25, L.26, P.29, C.30, L.33, L.79, L.80, L.81, L.82, W.83, W.94, T.102, F.103, L.106, H.107
- Chain G: G.35, V.39, L.42
- Chain R: G.12, L.13, A.17, V.19
- Ligands: CLA.22, UNL.77, SQD.81, UNL.98
16 PLIP interactions:2 interactions with chain R, 12 interactions with chain D, 2 interactions with chain G,- Hydrophobic interactions: R:L.13, R:V.19, D:P.29, D:L.33, D:L.81, D:L.82, D:W.83, D:W.83, D:W.83, D:L.106, G:V.39, G:L.42
- Hydrogen bonds: D:L.82
- Salt bridges: D:H.107
- pi-Stacking: D:F.103
- Metal complexes: D:H.107
CLA.104: 30 residues within 4Å:- Chain 7: F.17
- Chain U: F.109, Y.137, P.140, S.143, V.147, F.172, M.173, I.174, F.176, Q.177, I.182, L.183, H.188, G.191, V.192, V.195, F.196, V.273, A.276, A.277, I.280
- Chain X: L.172, L.195, F.247
- Ligands: CLA.105, PHO.106, CLA.163, CLA.166, LHG.171
19 PLIP interactions:3 interactions with chain X, 15 interactions with chain U, 1 interactions with chain 7,- Hydrophobic interactions: X:L.172, X:L.195, X:F.247, U:F.109, U:F.172, U:F.176, U:Q.177, U:I.182, U:I.182, U:L.183, U:V.192, U:V.195, U:V.195, U:F.196, U:F.196, U:I.280, 7:F.17
- Water bridges: U:I.280
- Metal complexes: U:H.188
CLA.105: 19 residues within 4Å:- Chain U: Q.189, V.192, A.193, F.196, G.197, L.200, W.268
- Chain X: F.147, V.165, I.168, F.169, F.171, L.172
- Ligands: CLA.104, PL9.110, DGD.157, PHO.164, CLA.166, LMG.173
13 PLIP interactions:6 interactions with chain X, 6 interactions with chain U, 1 Ligand-Water interactions,- Hydrophobic interactions: X:F.147, X:F.147, X:I.168, X:F.171, X:L.172, X:L.172, U:V.192, U:F.196, U:L.200, U:W.268
- Water bridges: U:H.188
- pi-Stacking: U:F.196
- Metal complexes: H2O.52
CLA.107: 28 residues within 4Å:- Chain 1: V.8, Y.9, V.11, V.12, T.13, F.15, V.16, F.19
- Chain U: V.25, I.26, P.29, T.30, F.83, Y.84, P.85, I.86, W.87, Q.103, L.104, F.107, H.108, L.111
- Ligands: BCR.108, LMG.139, CLA.144, CLA.145, DGD.155, UNL.181
23 PLIP interactions:14 interactions with chain U, 9 interactions with chain 1,- Hydrophobic interactions: U:I.26, U:P.29, U:P.29, U:T.30, U:F.83, U:P.85, U:I.86, U:W.87, U:W.87, U:L.104, U:L.111, 1:Y.9, 1:V.11, 1:V.12, 1:V.12, 1:T.13, 1:F.15, 1:F.15, 1:V.16, 1:F.19
- Hydrogen bonds: U:I.86
- Salt bridges: U:H.108
- Metal complexes: U:H.108
CLA.116: 10 residues within 4Å:- Chain 0: F.40, I.43, I.47, L.54
- Chain V: W.184, G.185, P.186, F.189
- Ligands: CLA.117, RRX.194
10 PLIP interactions:5 interactions with chain 0, 4 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: 0:F.40, 0:F.40, 0:I.43, 0:I.47, 0:L.54, V:W.184, V:P.186, V:F.189, V:F.189
- Metal complexes: H2O.60
CLA.117: 30 residues within 4Å:- Chain 0: F.37, F.40, I.44, L.45, Y.48
- Chain V: E.183, G.188, F.189, P.191, G.196, A.199, H.200, A.203, A.204, V.207, F.245, F.246, F.249, V.250, T.254
- Chain X: V.144, L.148, I.149, L.152
- Ligands: CLA.116, CLA.118, CLA.120, CLA.124, DGD.180, RRX.194
21 PLIP interactions:15 interactions with chain V, 4 interactions with chain X, 2 interactions with chain 0,- Hydrophobic interactions: V:F.189, V:F.189, V:P.191, V:A.199, V:H.200, V:A.204, V:V.207, V:F.245, V:F.246, V:F.246, V:F.249, V:F.249, X:V.144, X:L.148, X:I.149, X:L.152, 0:F.37, 0:I.44
- Water bridges: V:S.259
- pi-Stacking: V:F.189
- Metal complexes: V:H.200
CLA.118: 28 residues within 4Å:- Chain 0: M.34, F.37, L.38
- Chain V: R.67, L.68, A.145, L.148, C.149, F.152, L.157, M.165, V.197, H.200, H.201, A.243, F.246, A.247, V.250, V.251, T.261
- Ligands: CLA.117, CLA.119, CLA.120, CLA.121, CLA.123, CLA.124, CLA.125, RRX.194
17 PLIP interactions:16 interactions with chain V, 1 interactions with chain 0,- Hydrophobic interactions: V:L.68, V:L.148, V:L.148, V:F.152, V:F.152, V:F.152, V:A.243, V:F.246, V:F.246, V:A.247, V:V.250, V:V.251, 0:L.38
- Hydrogen bonds: V:R.67
- Salt bridges: V:R.67
- pi-Cation interactions: V:H.200
- Metal complexes: V:H.201
CLA.119: 26 residues within 4Å:- Chain V: W.32, F.60, F.64, R.67, L.144, L.147, L.148, V.244, A.247, A.248, V.251, F.450, H.454, F.457, A.458, F.461
- Ligands: CLA.118, CLA.120, CLA.121, CLA.122, CLA.126, CLA.127, CLA.128, CLA.130, CLA.131, BCR.133
15 PLIP interactions:15 interactions with chain V,- Hydrophobic interactions: V:W.32, V:F.60, V:F.64, V:F.64, V:L.147, V:L.148, V:V.244, V:A.247, V:V.251, V:F.457, V:F.457, V:F.461, V:F.461
- Salt bridges: V:R.67
- Metal complexes: V:H.454
CLA.120: 28 residues within 4Å:- Chain V: T.26, V.29, A.30, W.32, A.33, A.37, V.61, F.64, M.65, R.67, L.68, V.95, H.99, L.102, L.142, A.145, A.204, G.208
- Ligands: CLA.117, CLA.118, CLA.119, CLA.121, CLA.124, CLA.125, CLA.127, CLA.130, BCR.134, UNL.137
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:T.26, V:V.29, V:W.32, V:A.33, V:L.68, V:V.95, V:L.102, V:L.142, V:A.145
- Water bridges: V:R.67
- Salt bridges: V:R.67
- Metal complexes: V:H.99
CLA.121: 24 residues within 4Å:- Chain V: L.68, G.69, V.70, F.89, W.90, V.95, A.98, H.99, V.101, L.102, L.105, L.148, G.151, F.152, F.155, H.156, F.161, G.162, P.163
- Ligands: CLA.118, CLA.119, CLA.120, BCR.134, UNL.137
16 PLIP interactions:16 interactions with chain V,- Hydrophobic interactions: V:L.68, V:V.70, V:F.89, V:F.89, V:W.90, V:W.90, V:W.90, V:A.98, V:V.101, V:L.102, V:L.105, V:L.148, V:F.155, V:F.161, V:F.161
- Metal complexes: V:H.156
CLA.122: 28 residues within 4Å:- Chain 4: F.31
- Chain 5: F.14
- Chain V: W.32, M.36, Y.39, Q.57, G.58, M.59, F.60, L.323, F.324, T.326, G.327, P.328, W.449, F.450, A.453, H.454
- Chain X: T.267, M.271
- Ligands: BCR.94, CLA.119, CLA.128, BCR.132, BCR.133, LMG.135, PL9.169, LHG.170
15 PLIP interactions:10 interactions with chain V, 1 interactions with chain 5, 2 interactions with chain 4, 1 interactions with chain X, 1 Ligand-Water interactions,- Hydrophobic interactions: V:Y.39, V:F.60, V:F.60, V:F.324, V:T.326, V:W.449, V:W.449, V:W.449, 5:F.14, 4:F.31, 4:F.31, X:T.267
- Hydrogen bonds: V:G.327
- pi-Stacking: V:F.60
- Metal complexes: H2O.62
CLA.123: 25 residues within 4Å:- Chain 0: L.38, L.42
- Chain V: T.235, S.238, S.239, A.242, F.245, F.246, F.462, H.465, I.466, G.469, T.472, L.473
- Chain X: F.110, I.113, M.116, L.117, I.140
- Ligands: CLA.118, CLA.124, CLA.125, CLA.167, UNL.174, DGD.180
16 PLIP interactions:8 interactions with chain V, 7 interactions with chain X, 1 interactions with chain 0,- Hydrophobic interactions: V:A.242, V:F.246, V:F.462, V:F.462, V:L.473, X:F.110, X:F.110, X:F.110, X:I.113, X:M.116, X:L.117, X:I.140, 0:L.38
- Hydrogen bonds: V:S.238
- pi-Stacking: V:F.245
- Metal complexes: V:H.465
CLA.124: 28 residues within 4Å:- Chain 0: T.26, T.27, L.29, M.30, F.33, M.34, L.38, L.41
- Chain V: F.138, V.207, A.211, F.214, H.215, V.218, R.219, P.220, P.221, L.224, L.228, M.230
- Chain X: F.110
- Ligands: CLA.117, CLA.118, CLA.120, CLA.123, CLA.125, UNL.174, RRX.194
19 PLIP interactions:12 interactions with chain V, 6 interactions with chain 0, 1 interactions with chain X,- Hydrophobic interactions: V:F.138, V:F.138, V:F.138, V:V.207, V:A.211, V:F.214, V:F.214, V:L.224, V:L.228, V:L.228, 0:L.29, 0:M.30, 0:F.33, 0:L.38, 0:L.41, X:F.110
- Salt bridges: V:H.215
- Metal complexes: V:H.215
- Hydrogen bonds: 0:T.26
CLA.125: 22 residues within 4Å:- Chain V: H.22, L.134, M.137, F.138, H.141, L.142, A.145, L.228, M.230, I.233, T.235, V.236, S.239, S.240, A.243
- Ligands: CLA.118, CLA.120, CLA.123, CLA.124, CLA.127, CLA.130, RRX.194
8 PLIP interactions:7 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: V:L.134, V:M.137, V:F.138, V:L.228, V:M.230, V:I.233, V:T.235
- Metal complexes: H2O.58
CLA.126: 23 residues within 4Å:- Chain 5: F.21
- Chain V: W.4, Y.5, R.6, V.7, H.8, T.9, L.237, I.241, L.460, F.461, F.463, G.464, W.467, H.468, R.471, F.478
- Ligands: CLA.119, CLA.127, CLA.128, CLA.129, LHG.170, LHG.188
18 PLIP interactions:17 interactions with chain V, 1 interactions with chain 5,- Hydrophobic interactions: V:W.4, V:W.4, V:H.8, V:T.9, V:L.237, V:L.237, V:I.241, V:F.461, V:F.461, V:F.463, V:W.467, 5:F.21
- Hydrogen bonds: V:H.8
- Salt bridges: V:H.8, V:H.468, V:R.471
- pi-Stacking: V:W.467
- Metal complexes: V:H.468
CLA.127: 21 residues within 4Å:- Chain V: H.8, L.11, I.12, L.18, A.21, H.22, H.25, T.26, I.233, V.236, L.237, S.240, I.241, V.244
- Ligands: CLA.119, CLA.120, CLA.125, CLA.126, CLA.128, CLA.129, CLA.130
17 PLIP interactions:17 interactions with chain V,- Hydrophobic interactions: V:H.8, V:L.11, V:L.11, V:I.12, V:L.18, V:A.21, V:H.22, V:H.25, V:T.26, V:I.233, V:V.236, V:L.237, V:V.244
- Hydrogen bonds: V:S.240
- Salt bridges: V:H.22
- pi-Stacking: V:H.25
- Metal complexes: V:H.22
CLA.128: 14 residues within 4Å:- Chain V: H.8, H.25, V.29, W.32, F.461
- Ligands: CLA.119, CLA.122, CLA.126, CLA.127, CLA.129, BCR.132, BCR.133, LMG.135, LHG.170
9 PLIP interactions:9 interactions with chain V,- Hydrophobic interactions: V:V.29, V:V.29, V:W.32, V:W.32, V:F.461, V:F.461
- Salt bridges: V:H.8, V:H.8
- Metal complexes: V:H.25
CLA.129: 25 residues within 4Å:- Chain 4: Q.8, V.10
- Chain 5: F.21, L.25
- Chain N: F.8, C.12
- Chain V: L.2, V.7, H.8, V.10, L.11, A.21, M.24, L.28, W.114
- Ligands: SQD.91, LMT.92, UNL.93, BCR.94, CLA.126, CLA.127, CLA.128, BCR.132, LMG.135, LHG.188
10 PLIP interactions:2 interactions with chain 5, 6 interactions with chain V, 2 interactions with chain N,- Hydrophobic interactions: 5:F.21, 5:L.25, V:V.7, V:L.11, V:M.24, V:L.28, V:W.114, N:F.8, N:F.8
- Metal complexes: V:H.8
CLA.130: 20 residues within 4Å:- Chain 0: L.6, L.10, L.13, N.14
- Chain V: I.19, H.22, L.23, T.26, F.122, L.132, M.137, I.140, H.141, L.144
- Ligands: CLA.119, CLA.120, CLA.125, CLA.127, CLA.131, BCR.134
10 PLIP interactions:5 interactions with chain V, 5 interactions with chain 0,- Hydrophobic interactions: V:I.19, V:F.122, V:L.132, V:L.144, 0:L.6, 0:L.10, 0:L.10, 0:L.13, 0:L.13
- Metal complexes: V:H.141
CLA.131: 17 residues within 4Å:- Chain 0: T.4, L.6, G.7, L.10
- Chain V: I.19, L.23, L.106, A.109, W.112, H.113, L.119, L.121, F.122
- Ligands: SQD.12, CLA.119, CLA.130, BCR.134
13 PLIP interactions:10 interactions with chain V, 3 interactions with chain 0,- Hydrophobic interactions: V:I.19, V:L.23, V:L.106, V:W.112, V:W.112, V:L.119, V:L.121, V:F.122, 0:L.6, 0:L.10
- pi-Stacking: V:W.112
- Metal complexes: V:H.113
- Water bridges: 0:L.6
CLA.140: 22 residues within 4Å:- Chain W: T.72, L.73, L.146, G.149, A.150, L.153, W.201, I.202, V.211, H.215, I.218, A.256, M.260, I.263, F.267, V.274, Y.275
- Ligands: CLA.141, CLA.142, CLA.145, CLA.146, BCR.154
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:A.150, W:L.153, W:W.201, W:I.202, W:I.218, W:I.218, W:I.218, W:A.256, W:M.260, W:I.263, W:F.267, W:V.274
- Metal complexes: W:H.215
CLA.141: 26 residues within 4Å:- Chain W: W.41, I.65, L.66, H.69, L.73, W.75, G.149, L.152, K.156, F.160, L.257, M.260, A.264, V.268, Y.275, L.404, H.408, L.411, A.412, F.415
- Ligands: CLA.140, CLA.142, CLA.143, CLA.149, CLA.151, LMG.158
21 PLIP interactions:21 interactions with chain W,- Hydrophobic interactions: W:W.41, W:W.41, W:I.65, W:L.66, W:L.73, W:W.75, W:L.152, W:K.156, W:K.156, W:F.160, W:L.257, W:M.260, W:A.264, W:L.404, W:L.411, W:L.411, W:F.415
- Hydrogen bonds: W:Y.275
- Salt bridges: W:H.69, W:H.408
- Metal complexes: W:H.408
CLA.142: 20 residues within 4Å:- Chain W: I.38, V.39, A.42, T.46, L.66, H.69, I.70, L.73, W.75, V.92, H.96, M.260
- Ligands: CLA.140, CLA.141, CLA.146, CLA.148, CLA.149, CLA.151, CLA.152, LMG.161
8 PLIP interactions:8 interactions with chain W,- Hydrophobic interactions: W:I.38, W:V.39, W:A.42, W:L.73, W:W.75, W:V.92
- Salt bridges: W:H.69
- Metal complexes: W:H.96
CLA.143: 21 residues within 4Å:- Chain 3: P.17, V.21
- Chain W: W.41, M.45, F.48, Q.62, G.63, I.65, W.403, L.404, S.407, H.408, V.410, F.414
- Ligands: CLA.141, CLA.147, CLA.149, DGD.156, DGD.157, LMG.158, LHG.172
15 PLIP interactions:1 interactions with chain 3, 13 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: 3:V.21, W:W.41, W:F.48, W:I.65, W:I.65, W:W.403, W:W.403, W:W.403, W:L.404, W:V.410, W:F.414, W:F.414, W:F.414
- pi-Stacking: W:W.403
- Metal complexes: H2O.71
CLA.144: 26 residues within 4Å:- Chain 1: V.16, F.19, F.23
- Chain U: F.23, I.26, L.111, S.114, C.115, M.117, G.118, W.121
- Chain W: F.242, S.251, Y.252, G.255, A.256, L.416, H.419, L.420, A.423, R.427
- Ligands: CLA.107, LMG.139, CLA.146, BCR.154, DGD.155
18 PLIP interactions:8 interactions with chain U, 8 interactions with chain W, 2 interactions with chain 1,- Hydrophobic interactions: U:F.23, U:I.26, U:L.111, U:L.111, U:W.121, U:W.121, U:W.121, W:F.242, W:Y.252, W:Y.252, W:L.416, 1:F.19, 1:F.23
- pi-Stacking: U:W.121
- Water bridges: W:I.243, W:I.243
- Salt bridges: W:R.427
- Metal complexes: W:H.419
CLA.145: 18 residues within 4Å:- Chain W: L.139, L.143, L.191, I.221, G.225, W.228, H.229, T.232, T.233, P.234, F.235, W.237, A.238, F.242
- Ligands: CLA.107, CLA.140, CLA.146, BCR.154
10 PLIP interactions:10 interactions with chain W,- Hydrophobic interactions: W:L.139, W:L.143, W:L.143, W:L.191, W:W.228, W:W.237, W:F.242
- Hydrogen bonds: W:F.235
- Salt bridges: W:H.229
- Metal complexes: W:H.229
CLA.146: 22 residues within 4Å:- Chain W: M.135, T.136, L.139, H.142, L.143, L.146, C.222, W.237, F.242, W.244, Y.249, Y.252, S.253, A.256, L.257, M.260
- Ligands: CLA.140, CLA.142, CLA.144, CLA.145, CLA.148, BCR.154
18 PLIP interactions:17 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: W:M.135, W:T.136, W:L.139, W:L.139, W:L.146, W:W.237, W:F.242, W:W.244, W:W.244, W:Y.249, W:Y.249, W:Y.252, W:Y.252, W:Y.252, W:A.256, W:L.257
- Salt bridges: W:H.142
- Metal complexes: H2O.66
CLA.147: 26 residues within 4Å:- Chain 3: V.21, L.24, F.28
- Chain W: F.11, W.14, A.15, G.16, N.17, A.18, E.247, L.250, L.254, F.414, F.415, V.417, G.418, W.421, H.422, R.425
- Ligands: CLA.143, CLA.148, CLA.149, CLA.150, DGD.157, LMG.158, LHG.172
12 PLIP interactions:9 interactions with chain W, 3 interactions with chain 3,- Hydrophobic interactions: W:L.254, W:F.415, W:V.417, W:W.421, 3:V.21, 3:L.24, 3:F.28
- Hydrogen bonds: W:N.17
- Salt bridges: W:H.422, W:R.425
- pi-Stacking: W:W.421
- Metal complexes: W:H.422
CLA.148: 26 residues within 4Å:- Chain W: N.17, L.20, I.21, L.27, A.30, H.31, H.34, Y.127, W.129, M.135, I.138, H.142, L.146, G.246, E.247, Y.249, L.250, S.253, L.254, L.257
- Ligands: CLA.142, CLA.146, CLA.147, CLA.149, CLA.150, CLA.151
18 PLIP interactions:18 interactions with chain W,- Hydrophobic interactions: W:N.17, W:L.20, W:I.21, W:L.27, W:A.30, W:H.34, W:Y.127, W:W.129, W:W.129, W:W.129, W:I.138, W:I.138, W:L.146, W:Y.249, W:L.250
- Hydrogen bonds: W:S.253
- pi-Stacking: W:H.31
- Metal complexes: W:H.31
CLA.149: 19 residues within 4Å:- Chain 3: P.20, V.21, F.23, L.24
- Chain W: N.17, H.34, L.37, I.38, W.41, L.257, F.414, F.415
- Ligands: CLA.141, CLA.142, CLA.143, CLA.147, CLA.148, CLA.150, LHG.172
14 PLIP interactions:9 interactions with chain W, 5 interactions with chain 3,- Hydrophobic interactions: W:L.37, W:I.38, W:W.41, W:L.257, W:F.414, W:F.415, W:F.415, 3:P.20, 3:V.21, 3:F.23, 3:L.24, 3:L.24
- Hydrogen bonds: W:N.17
- Metal complexes: W:H.34
CLA.150: 36 residues within 4Å:- Chain 3: F.23, L.24, A.27, W.30, Q.31
- Chain W: T.2, N.3, R.4, W.13, G.16, N.17, R.19, L.20, L.23, K.26, A.30, H.34, L.37, A.101, G.104, F.105, A.111, I.112
- Ligands: CLA.147, CLA.148, CLA.149, BCR.160
- Chain a: I.19, I.20, L.23, N.29, L.30
- Chain c: M.19, V.20, P.24, A.28
21 PLIP interactions:5 interactions with chain a, 6 interactions with chain W, 7 interactions with chain 3, 3 interactions with chain c,- Hydrophobic interactions: a:I.19, a:I.19, a:I.20, a:L.23, a:L.30, W:A.30, W:L.37, W:F.105, W:A.111, 3:F.23, 3:L.24, 3:A.27, 3:W.30, c:V.20, c:P.24, c:A.28
- Hydrogen bonds: W:R.19
- Salt bridges: W:R.4
- Water bridges: 3:Q.31
- pi-Stacking: 3:W.30, 3:W.30
CLA.151: 18 residues within 4Å:- Chain W: H.31, A.35, L.103, L.118, F.124, F.125, Y.127, I.138, F.141, H.142, V.145, L.146, G.149
- Ligands: CLA.141, CLA.142, CLA.148, CLA.152, BCR.153
10 PLIP interactions:10 interactions with chain W,- Hydrophobic interactions: W:H.31, W:L.118, W:F.124, W:F.125, W:Y.127, W:I.138, W:F.141, W:F.141, W:F.141
- Metal complexes: W:H.142
CLA.152: 17 residues within 4Å:- Chain W: L.28, V.32, V.102, L.103, G.106, Y.109, H.110, P.115, L.118, Y.121, F.125
- Ligands: CLA.142, CLA.151, BCR.153, LMG.161, UNL.162, LMT.196
15 PLIP interactions:15 interactions with chain W,- Hydrophobic interactions: W:L.28, W:L.28, W:V.32, W:V.32, W:V.102, W:L.103, W:L.118, W:Y.121, W:F.125, W:F.125, W:F.125
- Salt bridges: W:H.110
- pi-Stacking: W:Y.109, W:F.125
- Metal complexes: W:H.110
CLA.163: 25 residues within 4Å:- Chain 4: L.30
- Chain 7: F.10
- Chain U: T.35, F.38, V.39, V.147, M.162, I.166, T.169, F.170, F.172, M.173
- Chain X: M.188, V.191, A.192, L.195, G.196, L.199
- Ligands: CLA.104, PHO.106, SQD.111, CLA.166, PL9.169, LHG.171, LHG.188
10 PLIP interactions:6 interactions with chain U, 2 interactions with chain X, 1 interactions with chain 7, 1 Ligand-Water interactions,- Hydrophobic interactions: U:T.35, U:F.38, U:V.39, U:V.147, U:F.170, U:F.172, X:V.191, X:L.199, 7:F.10
- Metal complexes: H2O.52
CLA.166: 26 residues within 4Å:- Chain U: M.173, F.196
- Chain X: L.112, P.139, V.142, S.145, V.146, F.171, L.172, F.175, Q.176, W.181, T.182, H.187, G.190, V.191, V.194, L.195, L.269, S.272, A.273, V.276
- Ligands: CLA.104, CLA.105, CLA.163, PHO.164
15 PLIP interactions:15 interactions with chain X,- Hydrophobic interactions: X:L.112, X:V.142, X:F.171, X:F.175, X:Q.176, X:T.182, X:V.191, X:V.191, X:V.194, X:V.194, X:L.195, X:L.195, X:L.269
- pi-Stacking: X:W.181
- Metal complexes: X:H.187
CLA.167: 26 residues within 4Å:- Chain 0: G.35, V.39, L.42
- Chain X: I.25, L.26, P.29, C.30, L.33, L.79, L.80, L.81, L.82, W.83, W.94, T.102, F.103, L.106, H.107
- Ligands: CLA.123, UNL.175, SQD.179, UNL.195
- Chain b: G.12, L.13, A.17, V.19
16 PLIP interactions:2 interactions with chain 0, 2 interactions with chain b, 12 interactions with chain X,- Hydrophobic interactions: 0:V.39, 0:L.42, b:L.13, b:V.19, X:P.29, X:L.33, X:L.81, X:L.82, X:W.83, X:W.83, X:W.83, X:L.106
- Hydrogen bonds: X:L.82
- Salt bridges: X:H.107
- pi-Stacking: X:F.103
- Metal complexes: X:H.107
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.7: 28 residues within 4Å:- Chain A: L.31, A.34, T.35, F.38, I.105, F.109, Y.116, Q.120, A.136, Y.137, A.139, P.140, F.148, M.162, G.165, P.269, V.273
- Chain D: L.195, A.198, L.199, A.202, I.203, W.243, F.247
- Ligands: CLA.5, SQD.12, CLA.65, PL9.71
17 PLIP interactions:14 interactions with chain A, 3 interactions with chain D- Hydrophobic interactions: A:L.31, A:A.34, A:F.38, A:I.105, A:F.109, A:Y.116, A:A.136, A:Y.137, A:Y.137, A:A.139, A:P.140, A:F.148, D:L.195, D:A.202, D:F.247
- Hydrogen bonds: A:Y.116, A:Q.120
PHO.66: 34 residues within 4Å:- Chain A: F.196, A.199, L.200, A.203, M.204, F.245, L.248, I.249
- Chain D: L.27, A.31, A.34, L.35, W.38, I.104, G.108, G.111, L.112, F.115, Q.119, N.132, A.135, F.136, A.138, P.139, F.143, F.163, G.164, V.165, P.265, V.266, L.269
- Ligands: CLA.6, PL9.11, CLA.68
20 PLIP interactions:19 interactions with chain D, 1 interactions with chain A- Hydrophobic interactions: D:A.31, D:W.38, D:W.38, D:W.38, D:I.104, D:L.112, D:L.112, D:F.115, D:F.115, D:A.135, D:F.136, D:F.136, D:A.138, D:P.139, D:P.265, D:L.269, A:F.196
- Hydrogen bonds: D:Q.119, D:N.132
- pi-Stacking: D:F.136
PHO.106: 28 residues within 4Å:- Chain U: L.31, A.34, T.35, F.38, I.105, F.109, Y.116, Q.120, A.136, Y.137, A.139, P.140, F.148, M.162, G.165, P.269, V.273
- Chain X: L.195, A.198, L.199, A.202, I.203, W.243, F.247
- Ligands: CLA.104, SQD.111, CLA.163, PL9.169
17 PLIP interactions:14 interactions with chain U, 3 interactions with chain X- Hydrophobic interactions: U:L.31, U:A.34, U:F.38, U:I.105, U:F.109, U:Y.116, U:A.136, U:Y.137, U:Y.137, U:A.139, U:P.140, U:F.148, X:L.195, X:A.202, X:F.247
- Hydrogen bonds: U:Y.116, U:Q.120
PHO.164: 34 residues within 4Å:- Chain U: F.196, A.199, L.200, A.203, M.204, F.245, L.248, I.249
- Chain X: L.27, A.31, A.34, L.35, W.38, I.104, G.108, G.111, L.112, F.115, Q.119, N.132, A.135, F.136, A.138, P.139, F.143, F.163, G.164, V.165, P.265, V.266, L.269
- Ligands: CLA.105, PL9.110, CLA.166
20 PLIP interactions:19 interactions with chain X, 1 interactions with chain U- Hydrophobic interactions: X:A.31, X:W.38, X:W.38, X:W.38, X:I.104, X:L.112, X:L.112, X:F.115, X:F.115, X:A.135, X:F.136, X:F.136, X:A.138, X:P.139, X:P.265, X:L.269, U:F.196
- Hydrogen bonds: X:Q.119, X:N.132
- pi-Stacking: X:F.136
- 20 x BCR: BETA-CAROTENE(Non-covalent)
BCR.9: 23 residues within 4Å:- Chain A: F.7, W.10, V.25, I.28, P.29, L.32, A.33, I.36, C.37, I.40, A.41, A.44, A.45, I.86, L.92, W.95, L.96, P.101
- Chain H: F.15
- Ligands: CLA.8, SQD.12, UNL.13, UNL.83
Ligand excluded by PLIPBCR.31: 16 residues within 4Å:- Chain 7: F.19
- Chain B: M.24, L.28, A.110, C.111, W.114
- Chain L: A.10, L.13
- Ligands: CLA.21, CLA.27, CLA.28, BCR.32, SQD.34, LMG.35, LHG.90, BCR.192
Ligand excluded by PLIPBCR.32: 16 residues within 4Å:- Chain B: L.28, G.31, W.32, S.35, I.100, V.101, S.103, G.104, L.108
- Ligands: CLA.18, CLA.21, CLA.27, BCR.31, SQD.34, LMG.35, BCR.192
Ligand excluded by PLIPBCR.33: 16 residues within 4Å:- Chain 7: F.18, F.22, F.23
- Chain B: L.102, L.105, L.108, A.109, W.112, V.115, Y.116
- Ligands: CLA.19, CLA.20, CLA.29, CLA.30, UNL.37, SQD.111
Ligand excluded by PLIPBCR.55: 18 residues within 4Å:- Chain C: F.90, V.91, V.94, I.98, S.99, V.102, L.103, F.125
- Chain J: Y.6
- Chain S: V.51, L.52, V.54, G.55, N.58, F.59
- Ligands: CLA.53, CLA.54, UNL.64
Ligand excluded by PLIPBCR.56: 19 residues within 4Å:- Chain C: I.187, F.188, Y.190, L.191, I.202, V.205, D.210, V.211, G.214, H.215, F.242, M.259
- Chain H: V.20, F.23, L.24
- Ligands: CLA.42, CLA.46, CLA.47, CLA.48
Ligand excluded by PLIPBCR.62: 21 residues within 4Å:- Chain C: A.33, G.36, L.37, F.90, V.94, L.97, I.98, S.100, A.101, G.104, A.111
- Chain J: Y.6, L.12, F.23, W.30
- Chain S: L.12, V.13, S.16, V.20
- Ligands: CLA.52, BCR.88
Ligand excluded by PLIPBCR.70: 16 residues within 4Å:- Chain D: Y.32, L.33, G.36, G.37, L.39, T.40, L.100, F.103
- Chain F: P.18, T.19, F.22, L.23, I.26
- Chain I: V.18, V.22
- Ligands: LMG.75
Ligand excluded by PLIPBCR.88: 25 residues within 4Å:- Chain C: F.40
- Chain I: A.11, T.12, G.15, M.16
- Chain J: L.12, L.16, I.19, L.22, F.23, A.25, L.26, F.28, V.29, A.32
- Chain Q: I.12, G.13, G.16, P.17
- Chain S: V.13, S.16, F.17
- Ligands: SQD.10, BCR.62, UNL.89
Ligand excluded by PLIPBCR.94: 19 residues within 4Å:- Chain A: L.18
- Chain N: F.8, A.11, A.15, F.17, F.18, I.21, F.22
- Chain V: W.32, S.35, M.36, Y.39, L.108
- Ligands: SQD.12, SQD.91, CLA.122, CLA.129, BCR.132, BCR.133
Ligand excluded by PLIPBCR.108: 23 residues within 4Å:- Chain 1: F.15
- Chain U: F.7, W.10, V.25, I.28, P.29, L.32, A.33, I.36, C.37, I.40, A.41, A.44, A.45, I.86, L.92, W.95, L.96, P.101
- Ligands: CLA.107, SQD.111, UNL.112, UNL.181
Ligand excluded by PLIPBCR.132: 16 residues within 4Å:- Chain 5: A.10, L.13
- Chain N: F.19
- Chain V: M.24, L.28, A.110, C.111, W.114
- Ligands: SQD.91, BCR.94, CLA.122, CLA.128, CLA.129, BCR.133, LMG.135, LHG.188
Ligand excluded by PLIPBCR.133: 16 residues within 4Å:- Chain V: L.28, G.31, W.32, S.35, I.100, V.101, S.103, G.104, L.108
- Ligands: SQD.91, BCR.94, CLA.119, CLA.122, CLA.128, BCR.132, LMG.135
Ligand excluded by PLIPBCR.134: 16 residues within 4Å:- Chain N: F.18, F.22, F.23
- Chain V: L.102, L.105, L.108, A.109, W.112, V.115, Y.116
- Ligands: SQD.12, CLA.120, CLA.121, CLA.130, CLA.131, UNL.137
Ligand excluded by PLIPBCR.153: 18 residues within 4Å:- Chain 3: Y.6
- Chain W: F.90, V.91, V.94, I.98, S.99, V.102, L.103, F.125
- Ligands: CLA.151, CLA.152, UNL.162
- Chain c: V.51, L.52, V.54, G.55, N.58, F.59
Ligand excluded by PLIPBCR.154: 19 residues within 4Å:- Chain 1: V.20, F.23, L.24
- Chain W: I.187, F.188, Y.190, L.191, I.202, V.205, D.210, V.211, G.214, H.215, F.242, M.259
- Ligands: CLA.140, CLA.144, CLA.145, CLA.146
Ligand excluded by PLIPBCR.160: 21 residues within 4Å:- Chain 3: Y.6, L.12, F.23, W.30
- Chain W: A.33, G.36, L.37, F.90, V.94, L.97, I.98, S.100, A.101, G.104, A.111
- Ligands: CLA.150, BCR.186
- Chain c: L.12, V.13, S.16, V.20
Ligand excluded by PLIPBCR.168: 16 residues within 4Å:- Chain 2: V.18, V.22
- Chain X: Y.32, L.33, G.36, G.37, L.39, T.40, L.100, F.103
- Chain Z: P.18, T.19, F.22, L.23, I.26
- Ligands: LMG.173
Ligand excluded by PLIPBCR.186: 25 residues within 4Å:- Chain 2: A.11, T.12, G.15, M.16
- Chain 3: L.12, L.16, I.19, L.22, F.23, A.25, L.26, F.28, V.29, A.32
- Chain W: F.40
- Ligands: SQD.109, BCR.160, UNL.187
- Chain a: I.12, G.13, G.16, P.17
- Chain c: V.13, S.16, F.17
Ligand excluded by PLIPBCR.192: 19 residues within 4Å:- Chain 7: F.8, A.11, A.15, F.17, F.18, I.21, F.22
- Chain B: W.32, S.35, M.36, Y.39, L.108
- Chain U: L.18
- Ligands: CLA.21, CLA.28, BCR.31, BCR.32, SQD.34, SQD.111
Ligand excluded by PLIP- 8 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.10: 22 residues within 4Å:- Chain A: L.190, A.193, G.194, F.255, N.257, S.260, F.263, F.264, A.267, W.268, V.271, G.272
- Chain C: Q.6, A.12, W.14
- Chain D: F.222, R.223
- Chain J: A.25, F.28
- Ligands: LHG.74, BCR.88, UNL.89
16 PLIP interactions:8 interactions with chain A, 4 interactions with chain J, 1 interactions with chain D, 3 interactions with chain C- Hydrophobic interactions: A:F.255, A:F.264, A:A.267, A:W.268, A:V.271, J:A.25, J:F.28, J:F.28, J:F.28, C:W.14
- Hydrogen bonds: A:N.257, A:S.260, A:S.260, C:Q.6, C:Q.6
- Salt bridges: D:R.223
SQD.12: 21 residues within 4Å:- Chain A: W.10, N.16, R.17, L.18, V.20, I.28, L.31, L.32, T.35
- Chain N: F.22
- Chain V: L.105, L.108, W.112, Y.116
- Ligands: PHO.7, BCR.9, UNL.13, CLA.65, BCR.94, CLA.131, BCR.134
13 PLIP interactions:9 interactions with chain A, 4 interactions with chain V- Hydrophobic interactions: A:L.18, A:L.18, A:V.20, A:I.28, A:L.31, A:L.32, V:L.105, V:L.108
- Hydrogen bonds: A:W.10, A:R.17, A:L.18, V:Y.116, V:Y.116
SQD.34: 22 residues within 4Å:- Chain 4: R.14, L.17, Y.18, L.21
- Chain 5: S.19, Y.26
- Chain 7: C.12, L.16, F.19, F.23
- Chain B: R.17, A.27, L.28, S.103, F.107, W.114
- Chain K: R.7
- Ligands: CLA.28, BCR.31, BCR.32, UNL.189, BCR.192
16 PLIP interactions:6 interactions with chain 4, 8 interactions with chain B, 1 interactions with chain K, 1 interactions with chain 7- Hydrophobic interactions: 4:L.17, 4:Y.18, 4:L.21, B:A.27, B:L.28, B:F.107, B:F.107, B:F.107, 7:F.19
- Hydrogen bonds: 4:R.14, 4:R.14
- Salt bridges: 4:R.14, B:R.17
- Water bridges: B:R.17, B:R.17, K:R.7
SQD.81: 18 residues within 4Å:- Chain D: R.14, R.16
- Chain E: E.4
- Chain F: F.5, T.6, V.7, V.10
- Chain R: L.22, T.23, V.26, L.27, I.30, D.34
- Chain T: Q.29, K.32, L.33
- Ligands: PL9.11, CLA.69
11 PLIP interactions:3 interactions with chain T, 3 interactions with chain R, 2 interactions with chain F, 1 interactions with chain E, 2 interactions with chain D- Hydrogen bonds: T:Q.29, T:K.32, T:K.32, F:V.7, E:E.4, D:R.14
- Hydrophobic interactions: R:L.22, R:V.26, R:L.27
- Water bridges: F:R.8
- Salt bridges: D:R.16
SQD.91: 22 residues within 4Å:- Chain 4: R.7
- Chain K: R.14, L.17, Y.18, L.21
- Chain L: S.19, Y.26
- Chain N: C.12, L.16, F.19, F.23
- Chain V: R.17, A.27, L.28, S.103, F.107, W.114
- Ligands: UNL.93, BCR.94, CLA.129, BCR.132, BCR.133
16 PLIP interactions:6 interactions with chain K, 8 interactions with chain V, 1 interactions with chain 4, 1 interactions with chain N- Hydrophobic interactions: K:L.17, K:Y.18, K:L.21, V:A.27, V:L.28, V:F.107, V:F.107, V:F.107, N:F.19
- Hydrogen bonds: K:R.14, K:R.14
- Salt bridges: K:R.14, V:R.17
- Water bridges: V:R.17, V:R.17, 4:R.7
SQD.109: 22 residues within 4Å:- Chain 3: A.25, F.28
- Chain U: L.190, A.193, G.194, F.255, N.257, S.260, F.263, F.264, A.267, W.268, V.271, G.272
- Chain W: Q.6, A.12, W.14
- Chain X: F.222, R.223
- Ligands: LHG.172, BCR.186, UNL.187
16 PLIP interactions:8 interactions with chain U, 4 interactions with chain 3, 3 interactions with chain W, 1 interactions with chain X- Hydrophobic interactions: U:F.255, U:F.264, U:A.267, U:W.268, U:V.271, 3:A.25, 3:F.28, 3:F.28, 3:F.28, W:W.14
- Hydrogen bonds: U:N.257, U:S.260, U:S.260, W:Q.6, W:Q.6
- Salt bridges: X:R.223
SQD.111: 21 residues within 4Å:- Chain 7: F.22
- Chain B: L.105, L.108, W.112, Y.116
- Chain U: W.10, N.16, R.17, L.18, V.20, I.28, L.31, L.32, T.35
- Ligands: CLA.30, BCR.33, PHO.106, BCR.108, UNL.112, CLA.163, BCR.192
13 PLIP interactions:4 interactions with chain B, 9 interactions with chain U- Hydrophobic interactions: B:L.105, B:L.108, U:L.18, U:L.18, U:V.20, U:I.28, U:L.31, U:L.32
- Hydrogen bonds: B:Y.116, B:Y.116, U:W.10, U:R.17, U:L.18
SQD.179: 18 residues within 4Å:- Chain X: R.14, R.16
- Chain Y: E.4
- Chain Z: F.5, T.6, V.7, V.10
- Ligands: PL9.110, CLA.167
- Chain b: L.22, T.23, V.26, L.27, I.30, D.34
- Chain d: Q.29, K.32, L.33
11 PLIP interactions:2 interactions with chain X, 1 interactions with chain Y, 2 interactions with chain Z, 3 interactions with chain d, 3 interactions with chain b- Hydrogen bonds: X:R.14, Y:E.4, Z:V.7, d:Q.29, d:K.32, d:K.32
- Salt bridges: X:R.16
- Water bridges: Z:R.8
- Hydrophobic interactions: b:L.22, b:V.26, b:L.27
- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.11: 30 residues within 4Å:- Chain A: F.201, M.204, H.205, L.208, A.241, H.242, F.245, I.249, A.253, S.254, F.255, L.261, F.264, L.265
- Chain D: V.20, G.24, F.28, P.29, A.31, Y.32, L.35
- Chain F: V.7, A.11, T.14, L.15
- Chain R: T.23
- Ligands: CLA.6, PHO.66, LHG.78, SQD.81
24 PLIP interactions:14 interactions with chain A, 6 interactions with chain D, 3 interactions with chain F, 1 interactions with chain R- Hydrophobic interactions: A:F.201, A:M.204, A:L.208, A:A.241, A:H.242, A:F.245, A:I.249, A:I.249, A:F.255, A:L.261, A:L.261, A:F.264, A:L.265, D:V.20, D:F.28, D:P.29, D:A.31, D:Y.32, D:L.35, F:V.7, F:A.11, F:L.15, R:T.23
- Hydrogen bonds: A:F.255
PL9.71: 33 residues within 4Å:- Chain A: F.42, I.67, I.166
- Chain D: M.188, M.189, A.192, G.193, L.199, H.204, T.207, Y.234, M.236, A.239, N.240, W.243, I.249, A.250, F.251, L.257, F.260, F.263, V.264, T.267, G.268
- Chain K: L.23, V.26, L.29
- Chain N: F.10
- Ligands: PHO.7, CLA.21, CLA.65, LHG.73, LHG.90
26 PLIP interactions:17 interactions with chain D, 5 interactions with chain A, 2 interactions with chain K, 2 interactions with chain N- Hydrophobic interactions: D:M.189, D:L.199, D:T.207, D:Y.234, D:A.239, D:W.243, D:F.251, D:F.251, D:F.251, D:L.257, D:F.260, D:F.263, D:V.264, D:T.267, A:F.42, A:F.42, A:F.42, A:I.67, A:I.166, K:L.23, K:L.29, N:F.10, N:F.10
- Hydrogen bonds: D:T.207, D:F.251
- pi-Stacking: D:F.251
PL9.110: 30 residues within 4Å:- Chain U: F.201, M.204, H.205, L.208, A.241, H.242, F.245, I.249, A.253, S.254, F.255, L.261, F.264, L.265
- Chain X: V.20, G.24, F.28, P.29, A.31, Y.32, L.35
- Chain Z: V.7, A.11, T.14, L.15
- Ligands: CLA.105, PHO.164, LHG.176, SQD.179
- Chain b: T.23
24 PLIP interactions:1 interactions with chain b, 6 interactions with chain X, 14 interactions with chain U, 3 interactions with chain Z- Hydrophobic interactions: b:T.23, X:V.20, X:F.28, X:P.29, X:A.31, X:Y.32, X:L.35, U:F.201, U:M.204, U:L.208, U:A.241, U:H.242, U:F.245, U:I.249, U:I.249, U:F.255, U:L.261, U:L.261, U:F.264, U:L.265, Z:V.7, Z:A.11, Z:L.15
- Hydrogen bonds: U:F.255
PL9.169: 33 residues within 4Å:- Chain 4: L.23, V.26, L.29
- Chain 7: F.10
- Chain U: F.42, I.67, I.166
- Chain X: M.188, M.189, A.192, G.193, L.199, H.204, T.207, Y.234, M.236, A.239, N.240, W.243, I.249, A.250, F.251, L.257, F.260, F.263, V.264, T.267, G.268
- Ligands: PHO.106, CLA.122, CLA.163, LHG.171, LHG.188
26 PLIP interactions:17 interactions with chain X, 5 interactions with chain U, 2 interactions with chain 7, 2 interactions with chain 4- Hydrophobic interactions: X:M.189, X:L.199, X:T.207, X:Y.234, X:A.239, X:W.243, X:F.251, X:F.251, X:F.251, X:L.257, X:F.260, X:F.263, X:V.264, X:T.267, U:F.42, U:F.42, U:F.42, U:I.67, U:I.166, 7:F.10, 7:F.10, 4:L.23, 4:L.29
- Hydrogen bonds: X:T.207, X:F.251
- pi-Stacking: X:F.251
- 36 x UNL: UNKNOWN LIGAND
UNL.13: 6 residues within 4Å:- Chain A: R.6, F.7, W.10
- Chain H: F.14
- Ligands: BCR.9, SQD.12
Ligand excluded by PLIPUNL.14: 7 residues within 4Å:- Chain A: I.40, L.92
- Chain V: W.74, G.88, F.89, L.97
- Ligands: UNL.83
Ligand excluded by PLIPUNL.36: 8 residues within 4Å:- Chain B: R.223, L.224, A.227
- Chain D: F.5
- Chain G: W.24, A.31, M.34
- Ligands: UNL.76
Ligand excluded by PLIPUNL.37: 4 residues within 4Å:- Chain B: W.90
- Ligands: CLA.19, CLA.20, BCR.33
Ligand excluded by PLIPUNL.38: 2 residues within 4Å:- Chain B: F.155, L.160
Ligand excluded by PLIPUNL.39: 6 residues within 4Å:- Chain 6: G.110
- Chain B: L.38, L.41, A.42, W.77
- Chain U: L.62
Ligand excluded by PLIPUNL.40: 4 residues within 4Å:- Chain 7: M.1, I.4
- Chain B: A.42
- Chain U: L.62
Ligand excluded by PLIPUNL.64: 3 residues within 4Å:- Chain C: Y.121
- Ligands: CLA.54, BCR.55
Ligand excluded by PLIPUNL.76: 11 residues within 4Å:- Chain B: A.227
- Chain D: D.9, K.13, W.22, R.124, L.125
- Chain R: F.24
- Ligands: CLA.22, CLA.23, UNL.36, UNL.77
Ligand excluded by PLIPUNL.77: 10 residues within 4Å:- Chain B: F.474
- Chain D: W.22, S.23, L.117, F.120, E.121, R.124
- Chain R: L.20
- Ligands: CLA.69, UNL.76
Ligand excluded by PLIPUNL.79: 4 residues within 4Å:- Chain E: P.25, F.28, I.29
- Chain I: G.17
Ligand excluded by PLIPUNL.83: 5 residues within 4Å:- Chain H: M.1, L.4
- Ligands: CLA.8, BCR.9, UNL.14
Ligand excluded by PLIPUNL.84: 3 residues within 4Å:- Chain H: T.3, T.7, I.10
Ligand excluded by PLIPUNL.87: 8 residues within 4Å:- Chain F: F.31
- Chain I: V.20, G.23, L.24, Y.27
- Chain Q: L.6
- Ligands: LMG.60, LMT.86
Ligand excluded by PLIPUNL.89: 6 residues within 4Å:- Chain A: W.268
- Chain C: W.13
- Chain J: F.36
- Ligands: SQD.10, DGD.59, BCR.88
Ligand excluded by PLIPUNL.93: 4 residues within 4Å:- Chain L: I.23, Y.26
- Ligands: SQD.91, CLA.129
Ligand excluded by PLIPUNL.95: 9 residues within 4Å:- Chain 5: L.6
- Chain L: L.8, A.12, V.15
- Chain N: M.1, I.4, T.5, F.8
- Chain V: Y.39
Ligand excluded by PLIPUNL.98: 5 residues within 4Å:- Chain D: W.83
- Chain R: S.15, G.16, V.19
- Ligands: CLA.69
Ligand excluded by PLIPUNL.112: 6 residues within 4Å:- Chain 1: F.14
- Chain U: R.6, F.7, W.10
- Ligands: BCR.108, SQD.111
Ligand excluded by PLIPUNL.113: 7 residues within 4Å:- Chain B: W.74, G.88, F.89, L.97
- Chain U: I.40, L.92
- Ligands: UNL.181
Ligand excluded by PLIPUNL.114: 6 residues within 4Å:- Chain A: L.62
- Chain M: G.110
- Chain V: L.38, L.41, A.42, W.77
Ligand excluded by PLIPUNL.115: 4 residues within 4Å:- Chain A: L.62
- Chain N: M.1, I.4
- Chain V: A.42
Ligand excluded by PLIPUNL.136: 8 residues within 4Å:- Chain 0: W.24, A.31, M.34
- Chain V: R.223, L.224, A.227
- Chain X: F.5
- Ligands: UNL.174
Ligand excluded by PLIPUNL.137: 4 residues within 4Å:- Chain V: W.90
- Ligands: CLA.120, CLA.121, BCR.134
Ligand excluded by PLIPUNL.138: 2 residues within 4Å:- Chain V: F.155, L.160
Ligand excluded by PLIPUNL.162: 3 residues within 4Å:- Chain W: Y.121
- Ligands: CLA.152, BCR.153
Ligand excluded by PLIPUNL.174: 11 residues within 4Å:- Chain V: A.227
- Chain X: D.9, K.13, W.22, R.124, L.125
- Ligands: CLA.123, CLA.124, UNL.136, UNL.175
- Chain b: F.24
Ligand excluded by PLIPUNL.175: 10 residues within 4Å:- Chain V: F.474
- Chain X: W.22, S.23, L.117, F.120, E.121, R.124
- Ligands: CLA.167, UNL.174
- Chain b: L.20
Ligand excluded by PLIPUNL.177: 4 residues within 4Å:- Chain 2: G.17
- Chain Y: P.25, F.28, I.29
Ligand excluded by PLIPUNL.181: 5 residues within 4Å:- Chain 1: M.1, L.4
- Ligands: CLA.107, BCR.108, UNL.113
Ligand excluded by PLIPUNL.182: 3 residues within 4Å:- Chain 1: T.3, T.7, I.10
Ligand excluded by PLIPUNL.185: 8 residues within 4Å:- Chain 2: V.20, G.23, L.24, Y.27
- Chain Z: F.31
- Ligands: LMG.158, LMT.184
- Chain a: L.6
Ligand excluded by PLIPUNL.187: 6 residues within 4Å:- Chain 3: F.36
- Chain U: W.268
- Chain W: W.13
- Ligands: SQD.109, DGD.157, BCR.186
Ligand excluded by PLIPUNL.189: 4 residues within 4Å:- Chain 5: I.23, Y.26
- Ligands: CLA.28, SQD.34
Ligand excluded by PLIPUNL.191: 9 residues within 4Å:- Chain 5: L.8, A.12, V.15
- Chain 7: M.1, I.4, T.5, F.8
- Chain B: Y.39
- Chain L: L.6
Ligand excluded by PLIPUNL.195: 5 residues within 4Å:- Chain X: W.83
- Ligands: CLA.167
- Chain b: S.15, G.16, V.19
Ligand excluded by PLIP- 10 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.35: 20 residues within 4Å:- Chain B: Y.39, T.326, G.327, P.328, K.331, F.452, A.453, V.456
- Chain D: I.274
- Chain K: F.35
- Chain L: N.4, L.6, A.10, L.13, V.17
- Ligands: CLA.21, CLA.27, CLA.28, BCR.31, BCR.32
14 PLIP interactions:8 interactions with chain B, 1 interactions with chain K, 4 interactions with chain L, 1 interactions with chain D- Hydrophobic interactions: B:F.452, B:A.453, B:V.456, K:F.35, L:A.10, L:L.13, L:V.17, D:I.274
- Hydrogen bonds: B:T.326, B:T.326, L:N.4
- Water bridges: B:T.326, B:K.331, B:K.331
LMG.41: 21 residues within 4Å:- Chain A: F.83, W.87, E.88, L.110, L.111, F.145
- Chain C: L.191, L.192, K.193, S.194, P.195, F.196, E.199, W.201, M.259, F.262
- Chain H: K.5, Y.9
- Ligands: CLA.8, CLA.46, DGD.57
15 PLIP interactions:9 interactions with chain C, 3 interactions with chain A, 3 interactions with chain H- Hydrophobic interactions: C:F.196, C:W.201, C:W.201, C:W.201, C:F.262, A:F.83, A:L.110
- Hydrogen bonds: C:E.199, A:W.87, H:K.5, H:K.5, H:Y.9
- Water bridges: C:S.194, C:S.194, C:S.194
LMG.60: 14 residues within 4Å:- Chain C: F.48, H.52, Q.62
- Chain I: I.19
- Chain J: D.14, V.21
- Chain Q: Q.5, I.9
- Ligands: CLA.43, CLA.45, CLA.49, DGD.58, LMT.86, UNL.87
9 PLIP interactions:1 interactions with chain I, 3 interactions with chain J, 2 interactions with chain Q, 3 interactions with chain C- Hydrophobic interactions: I:I.19, J:D.14, J:V.21, J:V.21, Q:Q.5, Q:I.9
- Hydrogen bonds: C:H.52
- Salt bridges: C:H.52, C:H.52
LMG.63: 14 residues within 4Å:- Chain C: V.39, W.75, D.85, F.87, P.88, V.91, V.92, V.95, H.96, S.99
- Chain S: F.59, V.62
- Ligands: CLA.44, CLA.54
10 PLIP interactions:10 interactions with chain C- Hydrophobic interactions: C:V.39, C:W.75, C:P.88, C:P.88, C:V.91, C:V.95, C:V.95
- Hydrogen bonds: C:D.85, C:D.85
- Water bridges: C:F.87
LMG.75: 18 residues within 4Å:- Chain D: L.39, Y.57, G.60, C.61, N.62, F.63
- Chain F: T.19, I.26, M.29, Q.30
- Chain I: F.25, G.28, A.29, L.33
- Ligands: CLA.6, DGD.59, BCR.70, MG.85
13 PLIP interactions:2 interactions with chain F, 3 interactions with chain I, 8 interactions with chain D- Hydrogen bonds: F:M.29, F:Q.30, I:F.25, I:G.28, D:F.63
- Water bridges: I:G.34, D:N.62
- Hydrophobic interactions: D:L.39, D:F.63, D:F.63, D:F.63, D:F.63, D:F.63
LMG.135: 20 residues within 4Å:- Chain 4: F.35
- Chain 5: N.4, L.6, A.10, L.13, V.17
- Chain V: Y.39, T.326, G.327, P.328, K.331, F.452, A.453, V.456
- Chain X: I.274
- Ligands: CLA.122, CLA.128, CLA.129, BCR.132, BCR.133
14 PLIP interactions:4 interactions with chain 5, 8 interactions with chain V, 1 interactions with chain X, 1 interactions with chain 4- Hydrophobic interactions: 5:A.10, 5:L.13, 5:V.17, V:F.452, V:A.453, V:V.456, X:I.274, 4:F.35
- Hydrogen bonds: 5:N.4, V:T.326, V:T.326
- Water bridges: V:T.326, V:K.331, V:K.331
LMG.139: 21 residues within 4Å:- Chain 1: K.5, Y.9
- Chain U: F.83, W.87, E.88, L.110, L.111, F.145
- Chain W: L.191, L.192, K.193, S.194, P.195, F.196, E.199, W.201, M.259, F.262
- Ligands: CLA.107, CLA.144, DGD.155
15 PLIP interactions:9 interactions with chain W, 3 interactions with chain 1, 3 interactions with chain U- Hydrophobic interactions: W:F.196, W:W.201, W:W.201, W:W.201, W:F.262, U:F.83, U:L.110
- Hydrogen bonds: W:E.199, 1:K.5, 1:K.5, 1:Y.9, U:W.87
- Water bridges: W:S.194, W:S.194, W:S.194
LMG.158: 14 residues within 4Å:- Chain 2: I.19
- Chain 3: D.14, V.21
- Chain W: F.48, H.52, Q.62
- Ligands: CLA.141, CLA.143, CLA.147, DGD.156, LMT.184, UNL.185
- Chain a: Q.5, I.9
9 PLIP interactions:3 interactions with chain W, 3 interactions with chain 3, 2 interactions with chain a, 1 interactions with chain 2- Hydrogen bonds: W:H.52
- Salt bridges: W:H.52, W:H.52
- Hydrophobic interactions: 3:D.14, 3:V.21, 3:V.21, a:Q.5, a:I.9, 2:I.19
LMG.161: 14 residues within 4Å:- Chain W: V.39, W.75, D.85, F.87, P.88, V.91, V.92, V.95, H.96, S.99
- Ligands: CLA.142, CLA.152
- Chain c: F.59, V.62
10 PLIP interactions:10 interactions with chain W- Hydrophobic interactions: W:V.39, W:W.75, W:P.88, W:P.88, W:V.91, W:V.95, W:V.95
- Hydrogen bonds: W:D.85, W:D.85
- Water bridges: W:F.87
LMG.173: 18 residues within 4Å:- Chain 2: F.25, G.28, A.29, L.33
- Chain X: L.39, Y.57, G.60, C.61, N.62, F.63
- Chain Z: T.19, I.26, M.29, Q.30
- Ligands: CLA.105, DGD.157, BCR.168, MG.183
13 PLIP interactions:8 interactions with chain X, 3 interactions with chain 2, 2 interactions with chain Z- Hydrophobic interactions: X:L.39, X:F.63, X:F.63, X:F.63, X:F.63, X:F.63
- Hydrogen bonds: X:F.63, 2:F.25, 2:G.28, Z:M.29, Z:Q.30
- Water bridges: X:N.62, 2:G.34
- 8 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.57: 30 residues within 4Å:- Chain A: L.81, S.138, L.141, F.145, I.150, I.153
- Chain C: P.195, F.196, G.197, G.198, E.199, G.200, W.201, V.203, S.204, V.205, N.206, F.262, C.266, F.270, N.271, N.272, T.273, D.338, F.339, R.340, L.416
- Ligands: CLA.8, LMG.41, CLA.46
22 PLIP interactions:5 interactions with chain A, 17 interactions with chain C- Hydrophobic interactions: A:L.141, A:F.145, A:F.145, A:F.145, A:I.153, C:P.195, C:F.196, C:W.201, C:V.203, C:F.262, C:F.262, C:F.262, C:L.416
- Hydrogen bonds: C:G.198, C:N.272, C:T.273, C:T.273, C:D.338, C:R.340, C:R.340
- Water bridges: C:F.196, C:D.338
DGD.58: 19 residues within 4Å:- Chain A: H.185, F.187
- Chain C: E.61, Q.62, G.63, L.382, S.384, N.396, F.397, V.398, W.403, T.406, S.407
- Chain I: F.26, Y.30
- Ligands: CLA.45, DGD.59, LMG.60, LMT.86
12 PLIP interactions:10 interactions with chain C, 1 interactions with chain I, 1 interactions with chain A- Hydrophobic interactions: C:L.382, C:W.403, I:F.26, A:F.187
- Hydrogen bonds: C:E.61, C:S.384, C:N.396, C:V.398, C:V.398
- Water bridges: C:Q.62, C:G.63, C:G.63
DGD.59: 31 residues within 4Å:- Chain A: P.186, Q.189, L.190, A.193, F.275, F.290, N.291, F.292, S.295
- Chain C: L.382, N.383, V.385, N.393, S.394, V.395, N.396
- Chain D: N.62, L.64
- Chain I: F.26, A.29, Y.30, G.34, S.35, S.36
- Chain P: Q.34
- Ligands: CLA.6, CLA.45, CLA.49, DGD.58, LMG.75, UNL.89
23 PLIP interactions:7 interactions with chain A, 1 interactions with chain D, 9 interactions with chain C, 1 interactions with chain P, 5 interactions with chain I- Hydrophobic interactions: A:P.186, A:P.186, A:L.190, A:L.190, A:A.193, A:F.275, D:L.64
- Hydrogen bonds: A:S.295, C:N.383, C:N.393, C:S.394, C:S.394, C:V.395, C:N.396, P:Q.34, I:Y.30, I:G.34, I:S.36
- Water bridges: C:N.393, C:N.396, C:N.396, I:G.34, I:S.36
DGD.82: 29 residues within 4Å:- Chain B: Y.192, F.249, G.253, Y.257, Y.272, Q.273, S.276, Y.278, A.455, F.462
- Chain D: G.76, H.77, L.79, L.106, I.113, I.149, L.152, G.153, S.155, A.280, L.281
- Chain G: L.45, Y.48, N.49, V.59, S.60, W.61
- Ligands: CLA.16, CLA.22
26 PLIP interactions:13 interactions with chain D, 6 interactions with chain G, 7 interactions with chain B- Hydrophobic interactions: D:L.79, D:L.106, D:I.113, D:I.149, D:L.152, D:L.152, D:L.152, D:A.280, D:L.281, G:Y.48, G:Y.48, G:Y.48, B:Y.257, B:A.455, B:F.462
- Hydrogen bonds: D:H.77, D:H.77, D:S.155, G:V.59, G:S.60, G:W.61, B:Y.192, B:Y.192, B:Y.257
- Water bridges: D:H.77, B:T.270
DGD.155: 30 residues within 4Å:- Chain U: L.81, S.138, L.141, F.145, I.150, I.153
- Chain W: P.195, F.196, G.197, G.198, E.199, G.200, W.201, V.203, S.204, V.205, N.206, F.262, C.266, F.270, N.271, N.272, T.273, D.338, F.339, R.340, L.416
- Ligands: CLA.107, LMG.139, CLA.144
22 PLIP interactions:17 interactions with chain W, 5 interactions with chain U- Hydrophobic interactions: W:P.195, W:F.196, W:W.201, W:V.203, W:F.262, W:F.262, W:F.262, W:L.416, U:L.141, U:F.145, U:F.145, U:F.145, U:I.153
- Hydrogen bonds: W:G.198, W:N.272, W:T.273, W:T.273, W:D.338, W:R.340, W:R.340
- Water bridges: W:F.196, W:D.338
DGD.156: 19 residues within 4Å:- Chain 2: F.26, Y.30
- Chain U: H.185, F.187
- Chain W: E.61, Q.62, G.63, L.382, S.384, N.396, F.397, V.398, W.403, T.406, S.407
- Ligands: CLA.143, DGD.157, LMG.158, LMT.184
12 PLIP interactions:10 interactions with chain W, 1 interactions with chain 2, 1 interactions with chain U- Hydrophobic interactions: W:L.382, W:W.403, 2:F.26, U:F.187
- Hydrogen bonds: W:E.61, W:S.384, W:N.396, W:V.398, W:V.398
- Water bridges: W:Q.62, W:G.63, W:G.63
DGD.157: 31 residues within 4Å:- Chain 2: F.26, A.29, Y.30, G.34, S.35, S.36
- Chain 9: Q.34
- Chain U: P.186, Q.189, L.190, A.193, F.275, F.290, N.291, F.292, S.295
- Chain W: L.382, N.383, V.385, N.393, S.394, V.395, N.396
- Chain X: N.62, L.64
- Ligands: CLA.105, CLA.143, CLA.147, DGD.156, LMG.173, UNL.187
23 PLIP interactions:7 interactions with chain U, 9 interactions with chain W, 1 interactions with chain X, 1 interactions with chain 9, 5 interactions with chain 2- Hydrophobic interactions: U:P.186, U:P.186, U:L.190, U:L.190, U:A.193, U:F.275, X:L.64
- Hydrogen bonds: U:S.295, W:N.383, W:N.393, W:S.394, W:S.394, W:V.395, W:N.396, 9:Q.34, 2:Y.30, 2:G.34, 2:S.36
- Water bridges: W:N.393, W:N.396, W:N.396, 2:G.34, 2:S.36
DGD.180: 29 residues within 4Å:- Chain 0: L.45, Y.48, N.49, V.59, S.60, W.61
- Chain V: Y.192, F.249, G.253, Y.257, Y.272, Q.273, S.276, Y.278, A.455, F.462
- Chain X: G.76, H.77, L.79, L.106, I.113, I.149, L.152, G.153, S.155, A.280, L.281
- Ligands: CLA.117, CLA.123
26 PLIP interactions:13 interactions with chain X, 6 interactions with chain 0, 7 interactions with chain V- Hydrophobic interactions: X:L.79, X:L.106, X:I.113, X:I.149, X:L.152, X:L.152, X:L.152, X:A.280, X:L.281, 0:Y.48, 0:Y.48, 0:Y.48, V:Y.257, V:A.455, V:F.462
- Hydrogen bonds: X:H.77, X:H.77, X:S.155, 0:V.59, 0:S.60, 0:W.61, V:Y.192, V:Y.192, V:Y.257
- Water bridges: X:H.77, V:T.270
- 8 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.61: 11 residues within 4Å:- Chain A: W.4, E.5, C.8
- Chain C: W.237, R.240
- Chain H: V.20, F.21, L.24, S.25, G.26, R.30
9 PLIP interactions:5 interactions with chain C, 4 interactions with chain H- Hydrophobic interactions: C:W.237, C:W.237, C:W.237, H:V.20, H:F.21
- Hydrogen bonds: C:R.240, C:R.240, H:R.30
- Water bridges: H:R.30
LMT.86: 6 residues within 4Å:- Chain I: G.23, Y.27, Y.30
- Ligands: DGD.58, LMG.60, UNL.87
2 PLIP interactions:2 interactions with chain I- Hydrophobic interactions: I:Y.30
- Water bridges: I:Y.27
LMT.92: 12 residues within 4Å:- Chain 4: P.9, V.10
- Chain 5: V.20, I.24, Q.28, Q.32
- Chain L: V.27, E.30, S.31, Q.32, Q.33
- Ligands: CLA.129
8 PLIP interactions:3 interactions with chain L, 3 interactions with chain 5, 2 interactions with chain 4- Hydrophobic interactions: L:V.27, 5:V.20, 5:I.24
- Hydrogen bonds: L:E.30, L:Q.32, 5:Q.28, 4:V.10, 4:V.10
LMT.99: 11 residues within 4Å:- Chain C: A.101, F.105, Y.109
- Chain S: M.19, Y.27, W.33, F.41, S.44, W.47, I.48
- Ligands: CLA.54
7 PLIP interactions:5 interactions with chain S, 2 interactions with chain C- Hydrophobic interactions: S:M.19, S:W.47, S:W.47, S:I.48, C:A.101, C:F.105
- Hydrogen bonds: S:Y.27
LMT.159: 11 residues within 4Å:- Chain 1: V.20, F.21, L.24, S.25, G.26, R.30
- Chain U: W.4, E.5, C.8
- Chain W: W.237, R.240
9 PLIP interactions:5 interactions with chain W, 4 interactions with chain 1- Hydrophobic interactions: W:W.237, W:W.237, W:W.237, 1:V.20, 1:F.21
- Hydrogen bonds: W:R.240, W:R.240, 1:R.30
- Water bridges: 1:R.30
LMT.184: 6 residues within 4Å:- Chain 2: G.23, Y.27, Y.30
- Ligands: DGD.156, LMG.158, UNL.185
2 PLIP interactions:2 interactions with chain 2- Hydrophobic interactions: 2:Y.30
- Water bridges: 2:Y.27
LMT.190: 12 residues within 4Å:- Chain 5: V.27, E.30, S.31, Q.32, Q.33
- Chain K: P.9, V.10
- Chain L: V.20, I.24, Q.28, Q.32
- Ligands: CLA.28
8 PLIP interactions:3 interactions with chain 5, 3 interactions with chain L, 2 interactions with chain K- Hydrophobic interactions: 5:V.27, L:V.20, L:I.24
- Hydrogen bonds: 5:E.30, 5:Q.32, L:Q.28, K:V.10, K:V.10
LMT.196: 11 residues within 4Å:- Chain W: A.101, F.105, Y.109
- Ligands: CLA.152
- Chain c: M.19, Y.27, W.33, F.41, S.44, W.47, I.48
7 PLIP interactions:5 interactions with chain c, 2 interactions with chain W- Hydrophobic interactions: c:M.19, c:W.47, c:W.47, c:I.48, W:A.101, W:F.105
- Hydrogen bonds: c:Y.27
- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.67: 10 residues within 4Å:- Chain A: H.205, E.234, Y.236, H.262
- Chain D: H.204, V.208, Y.234, K.254, H.258
- Ligands: FE2.2
5 PLIP interactions:2 interactions with chain A, 3 interactions with chain D- Hydrogen bonds: A:Y.236, A:Y.236, D:Y.234, D:Y.234, D:K.254
BCT.165: 10 residues within 4Å:- Chain U: H.205, E.234, Y.236, H.262
- Chain X: H.204, V.208, Y.234, K.254, H.258
- Ligands: FE2.101
5 PLIP interactions:3 interactions with chain X, 2 interactions with chain U- Hydrogen bonds: X:Y.234, X:Y.234, X:K.254, U:Y.236, U:Y.236
- 10 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.72: 27 residues within 4Å:- Chain A: S.222, N.224
- Chain B: W.4, Y.5, R.6, L.460, F.463, W.467, F.478
- Chain D: Y.131, I.134, W.256, F.259, L.262, F.263, V.266, T.267, W.270, M.271
- Chain K: L.23, I.24
- Chain L: F.14, P.18
- Ligands: CLA.21, CLA.25, CLA.27, LHG.90
19 PLIP interactions:6 interactions with chain D, 1 interactions with chain K, 6 interactions with chain B, 3 interactions with chain L, 3 interactions with chain A- Hydrophobic interactions: D:L.262, D:F.263, D:V.266, D:W.270, K:I.24, B:L.460, L:F.14, L:F.14, L:P.18
- Water bridges: D:R.129, D:Y.131, B:R.6, B:R.6, B:R.6, A:A.223
- Hydrogen bonds: B:Y.5, A:S.222, A:N.224
- Salt bridges: B:R.6
LHG.73: 25 residues within 4Å:- Chain A: R.119
- Chain D: I.246, F.247, I.249, A.250, F.251, S.252, N.253, W.256, F.260
- Chain K: N.13, T.15, S.16, Y.18, L.19, L.22, L.29
- Chain N: I.13, F.17, A.20, I.21
- Ligands: CLA.5, CLA.65, PL9.71, LHG.90
24 PLIP interactions:7 interactions with chain K, 10 interactions with chain D, 7 interactions with chain N- Hydrophobic interactions: K:Y.18, K:L.29, D:F.247, D:F.251, D:F.260, D:F.260, N:I.13, N:F.17, N:F.17, N:F.17, N:A.20, N:I.21
- Hydrogen bonds: K:N.13, K:S.16, K:S.16, D:S.252, D:S.252, D:N.253
- Water bridges: K:T.15, K:T.15, D:A.250, D:S.252, D:S.252, N:E.25
LHG.74: 23 residues within 4Å:- Chain A: R.130, W.132, A.136, F.263, A.266, A.267, W.274, F.275
- Chain C: F.11, W.14, A.15, W.421, R.425
- Chain D: E.209, N.210, A.219, S.220, T.221, F.222
- Ligands: SQD.10, CLA.45, CLA.49, CLA.51
16 PLIP interactions:5 interactions with chain D, 6 interactions with chain A, 5 interactions with chain C- Hydrogen bonds: D:N.210, D:A.219, D:S.220, D:T.221, C:R.425, C:R.425
- Water bridges: D:T.221, A:R.130
- Hydrophobic interactions: A:A.136, A:A.267, A:W.274, A:F.275, C:W.14, C:W.14, C:W.421
- Salt bridges: A:R.130
LHG.78: 14 residues within 4Å:- Chain A: L.248, I.249, F.250, Y.252, A.253, S.254, F.255
- Chain D: F.17, V.18, F.115
- Chain E: P.6, F.7, S.8
- Ligands: PL9.11
11 PLIP interactions:5 interactions with chain E, 2 interactions with chain A, 4 interactions with chain D- Hydrophobic interactions: E:F.7, E:F.7, E:F.7, A:F.250, A:F.255, D:F.17, D:V.18, D:V.18, D:F.115
- Hydrogen bonds: E:F.7, E:S.8
LHG.90: 26 residues within 4Å:- Chain A: S.222, N.224
- Chain B: P.3, W.4, Y.5
- Chain D: A.192, W.256, F.260, F.263
- Chain K: E.11, L.12, N.13, S.16, L.19, G.20, L.23, V.26
- Chain L: P.18, F.21
- Ligands: CLA.25, CLA.28, BCR.31, CLA.65, PL9.71, LHG.72, LHG.73
20 PLIP interactions:1 interactions with chain B, 3 interactions with chain A, 1 interactions with chain L, 9 interactions with chain K, 6 interactions with chain D- Hydrogen bonds: B:W.4, A:S.222, A:S.222, A:N.224, K:E.11, K:E.11, K:N.13, K:S.16
- Hydrophobic interactions: L:F.21, K:L.19, K:L.23, K:L.23, K:V.26, D:A.192, D:W.256, D:F.260, D:F.263, D:F.263, D:F.263
- Water bridges: K:N.13
LHG.170: 27 residues within 4Å:- Chain 4: L.23, I.24
- Chain 5: F.14, P.18
- Chain U: S.222, N.224
- Chain V: W.4, Y.5, R.6, L.460, F.463, W.467, F.478
- Chain X: Y.131, I.134, W.256, F.259, L.262, F.263, V.266, T.267, W.270, M.271
- Ligands: CLA.122, CLA.126, CLA.128, LHG.188
19 PLIP interactions:6 interactions with chain V, 6 interactions with chain X, 3 interactions with chain U, 3 interactions with chain 5, 1 interactions with chain 4- Hydrophobic interactions: V:L.460, X:L.262, X:F.263, X:V.266, X:W.270, 5:F.14, 5:F.14, 5:P.18, 4:I.24
- Hydrogen bonds: V:Y.5, U:S.222, U:N.224
- Water bridges: V:R.6, V:R.6, V:R.6, X:R.129, X:Y.131, U:A.223
- Salt bridges: V:R.6
LHG.171: 25 residues within 4Å:- Chain 4: N.13, T.15, S.16, Y.18, L.19, L.22, L.29
- Chain 7: I.13, F.17, A.20, I.21
- Chain U: R.119
- Chain X: I.246, F.247, I.249, A.250, F.251, S.252, N.253, W.256, F.260
- Ligands: CLA.104, CLA.163, PL9.169, LHG.188
24 PLIP interactions:10 interactions with chain X, 7 interactions with chain 4, 7 interactions with chain 7- Hydrophobic interactions: X:F.247, X:F.251, X:F.260, X:F.260, 4:Y.18, 4:L.29, 7:I.13, 7:F.17, 7:F.17, 7:F.17, 7:A.20, 7:I.21
- Hydrogen bonds: X:S.252, X:S.252, X:N.253, 4:N.13, 4:S.16, 4:S.16
- Water bridges: X:A.250, X:S.252, X:S.252, 4:T.15, 4:T.15, 7:E.25
LHG.172: 23 residues within 4Å:- Chain U: R.130, W.132, A.136, F.263, A.266, A.267, W.274, F.275
- Chain W: F.11, W.14, A.15, W.421, R.425
- Chain X: E.209, N.210, A.219, S.220, T.221, F.222
- Ligands: SQD.109, CLA.143, CLA.147, CLA.149
16 PLIP interactions:5 interactions with chain W, 6 interactions with chain U, 5 interactions with chain X- Hydrophobic interactions: W:W.14, W:W.14, W:W.421, U:A.136, U:A.267, U:W.274, U:F.275
- Hydrogen bonds: W:R.425, W:R.425, X:N.210, X:A.219, X:S.220, X:T.221
- Water bridges: U:R.130, X:T.221
- Salt bridges: U:R.130
LHG.176: 14 residues within 4Å:- Chain U: L.248, I.249, F.250, Y.252, A.253, S.254, F.255
- Chain X: F.17, V.18, F.115
- Chain Y: P.6, F.7, S.8
- Ligands: PL9.110
11 PLIP interactions:5 interactions with chain Y, 4 interactions with chain X, 2 interactions with chain U- Hydrophobic interactions: Y:F.7, Y:F.7, Y:F.7, X:F.17, X:V.18, X:V.18, X:F.115, U:F.250, U:F.255
- Hydrogen bonds: Y:F.7, Y:S.8
LHG.188: 26 residues within 4Å:- Chain 4: E.11, L.12, N.13, S.16, L.19, G.20, L.23, V.26
- Chain 5: P.18, F.21
- Chain U: S.222, N.224
- Chain V: P.3, W.4, Y.5
- Chain X: A.192, W.256, F.260, F.263
- Ligands: CLA.126, CLA.129, BCR.132, CLA.163, PL9.169, LHG.170, LHG.171
20 PLIP interactions:9 interactions with chain 4, 6 interactions with chain X, 1 interactions with chain V, 3 interactions with chain U, 1 interactions with chain 5- Hydrophobic interactions: 4:L.19, 4:L.23, 4:L.23, 4:V.26, X:A.192, X:W.256, X:F.260, X:F.263, X:F.263, X:F.263, 5:F.21
- Hydrogen bonds: 4:E.11, 4:E.11, 4:N.13, 4:S.16, V:W.4, U:S.222, U:S.222, U:N.224
- Water bridges: 4:N.13
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.80: 20 residues within 4Å:- Chain E: R.5, F.7, I.10, R.15, Y.16, I.19, H.20, T.23, I.24, L.27
- Chain F: I.4, R.8, W.9, V.12, H.13, A.16, V.17, I.20
- Chain T: A.18, I.22
23 PLIP interactions:11 interactions with chain E, 10 interactions with chain F, 2 interactions with chain T,- Hydrophobic interactions: E:I.10, E:Y.16, E:I.19, E:T.23, E:I.24, E:I.24, F:I.4, F:W.9, F:V.12, F:A.16, F:V.17, T:A.18, T:I.22
- Salt bridges: E:R.5, E:R.15, F:R.8
- pi-Stacking: E:Y.16, F:W.9, F:W.9
- pi-Cation interactions: E:H.20, F:H.13
- Metal complexes: E:H.20, F:H.13
HEM.178: 20 residues within 4Å:- Chain Y: R.5, F.7, I.10, R.15, Y.16, I.19, H.20, T.23, I.24, L.27
- Chain Z: I.4, R.8, W.9, V.12, H.13, A.16, V.17, I.20
- Chain d: A.18, I.22
23 PLIP interactions:2 interactions with chain d, 10 interactions with chain Z, 11 interactions with chain Y,- Hydrophobic interactions: d:A.18, d:I.22, Z:I.4, Z:W.9, Z:V.12, Z:A.16, Z:V.17, Y:I.10, Y:Y.16, Y:I.19, Y:T.23, Y:I.24, Y:I.24
- Salt bridges: Z:R.8, Y:R.5, Y:R.15
- pi-Stacking: Z:W.9, Z:W.9, Y:Y.16
- pi-Cation interactions: Z:H.13, Y:H.20
- Metal complexes: Z:H.13, Y:H.20
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.85: 5 residues within 4Å:- Chain I: G.28, A.31, G.32, L.33
- Ligands: LMG.75
4 PLIP interactions:3 interactions with chain I, 1 Ligand-Water interactions- Metal complexes: I:G.28, I:A.31, I:L.33, H2O.33
MG.183: 5 residues within 4Å:- Chain 2: G.28, A.31, G.32, L.33
- Ligands: LMG.173
4 PLIP interactions:3 interactions with chain 2, 1 Ligand-Water interactions- Metal complexes: 2:G.28, 2:A.31, 2:L.33, H2O.80
- 2 x HEC: HEME C(Covalent)
HEC.96: 25 residues within 4Å:- Chain P: A.36, C.37, S.39, C.40, H.41, T.46, T.48, N.49, L.52, D.53, L.54, T.58, L.59, A.62, L.72, Y.75, M.76, T.81, Y.82, I.88, H.92, P.93, M.104, I.115, I.119
16 PLIP interactions:16 interactions with chain P,- Hydrophobic interactions: P:T.46, P:N.49, P:L.52, P:L.54, P:L.72, P:Y.75, P:I.88, P:P.93, P:I.115, P:I.119
- Hydrogen bonds: P:N.49, P:D.53, P:Y.82
- pi-Stacking: P:Y.75
- Metal complexes: P:H.41, P:H.92
HEC.193: 25 residues within 4Å:- Chain 9: A.36, C.37, S.39, C.40, H.41, T.46, T.48, N.49, L.52, D.53, L.54, T.58, L.59, A.62, L.72, Y.75, M.76, T.81, Y.82, I.88, H.92, P.93, M.104, I.115, I.119
16 PLIP interactions:16 interactions with chain 9,- Hydrophobic interactions: 9:T.46, 9:N.49, 9:L.52, 9:L.54, 9:L.72, 9:Y.75, 9:I.88, 9:P.93, 9:I.115, 9:I.119
- Hydrogen bonds: 9:N.49, 9:D.53, 9:Y.82
- pi-Stacking: 9:Y.75
- Metal complexes: 9:H.41, 9:H.92
- 2 x RRX: (3R)-beta,beta-caroten-3-ol(Non-covalent)
RRX.97: 17 residues within 4Å:- Chain G: M.30, F.33, M.34, L.36, F.37, V.39, F.40, I.43, L.54
- Chain R: T.1, L.6, F.10
- Ligands: CLA.15, CLA.16, CLA.17, CLA.23, CLA.24
10 PLIP interactions:7 interactions with chain G, 3 interactions with chain R- Hydrophobic interactions: G:F.37, G:F.37, G:F.37, G:F.37, G:V.39, G:F.40, G:L.54, R:L.6, R:F.10
- Hydrogen bonds: R:T.1
RRX.194: 17 residues within 4Å:- Chain 0: M.30, F.33, M.34, L.36, F.37, V.39, F.40, I.43, L.54
- Ligands: CLA.116, CLA.117, CLA.118, CLA.124, CLA.125
- Chain b: T.1, L.6, F.10
10 PLIP interactions:7 interactions with chain 0, 3 interactions with chain b- Hydrophobic interactions: 0:F.37, 0:F.37, 0:F.37, 0:F.37, 0:V.39, 0:F.40, 0:L.54, b:L.6, b:F.10
- Hydrogen bonds: b:T.1
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kato, K. et al., High-resolution cryo-EM structure of photosystem II reveals damage from high-dose electron beams. Commun Biol (2021)
- Release Date
- 2021-03-31
- Peptides
- Photosystem II protein D1: AU
Photosystem II CP47 reaction center protein: BV
Photosystem II CP43 reaction center protein: CW
Photosystem II D2 protein: DX
Cytochrome b559 subunit alpha: EY
Cytochrome b559 subunit beta: FZ
Photosystem II reaction center protein H: G0
Photosystem II reaction center protein I: H1
Photosystem II reaction center protein J: I2
Photosystem II reaction center protein K: J3
Photosystem II reaction center protein L: K4
Photosystem II reaction center protein M: L5
Photosystem II manganese-stabilizing polypeptide: M6
Photosystem II reaction center protein T: N7
Photosystem II 12 kDa extrinsic protein: O8
Cytochrome c-550: P9
Photosystem II reaction center protein Ycf12: Qa
Photosystem II reaction center protein X: Rb
Photosystem II reaction center protein Z: Sc
Photosystem II protein Y: Td - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AU
aB
BV
bC
CW
cD
DX
dE
EY
eF
FZ
fG
H0
hH
I1
iI
J2
jJ
K3
kK
L4
lL
M5
mM
O6
oN
T7
tO
U8
uP
V9
vQ
Ya
yR
Xb
xS
Zc
zT
Rd
r - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 7d1t.1
Cryo-EM Structure of PSII at 1.95 angstrom resolution
Photosystem II protein D1
Toggle Identical (AU)Photosystem II CP47 reaction center protein
Toggle Identical (BV)Photosystem II CP43 reaction center protein
Toggle Identical (CW)Photosystem II D2 protein
Toggle Identical (DX)Cytochrome b559 subunit alpha
Toggle Identical (EY)Cytochrome b559 subunit beta
Toggle Identical (FZ)Photosystem II reaction center protein H
Toggle Identical (G0)Photosystem II reaction center protein I
Toggle Identical (H1)Photosystem II reaction center protein J
Toggle Identical (I2)Photosystem II reaction center protein K
Toggle Identical (J3)Photosystem II reaction center protein L
Toggle Identical (K4)Photosystem II reaction center protein M
Toggle Identical (L5)Photosystem II manganese-stabilizing polypeptide
Toggle Identical (M6)Photosystem II reaction center protein T
Toggle Identical (N7)Photosystem II 12 kDa extrinsic protein
Toggle Identical (O8)Cytochrome c-550
Toggle Identical (P9)Photosystem II reaction center protein Ycf12
Toggle Identical (Qa)Photosystem II reaction center protein X
Toggle Identical (Rb)Photosystem II reaction center protein Z
Toggle Identical (Sc)Photosystem II protein Y
Toggle Identical (Td)Related Entries With Identical Sequence
1izl.1 | 1mz4.1 | 1s5l.1 | 1s5l.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1 | 5e79.1 more...less...5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kaf.1 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1 | 9evx.1