- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.09 Å
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 2 x FE2: FE (II) ION(Non-covalent)
- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.2: 36 residues within 4Å:- Chain A: F.119, A.123, Y.147, P.150, L.151, S.153, A.154, A.156, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, A.287, I.290
- Chain D: L.182, L.183, V.204, L.205, F.257
- Chain O: F.17
- Ligands: CLA.3, PHO.4, CLA.10, CLA.68, LHG.73
18 PLIP interactions:16 interactions with chain A, 2 interactions with chain D,- Hydrophobic interactions: A:F.119, A:P.150, A:M.183, A:F.186, A:Q.187, A:I.192, A:I.192, A:L.193, A:V.202, A:F.206, A:F.206, A:T.286, A:I.290, D:L.182, D:L.205
- Hydrogen bonds: A:T.286
- Water bridges: A:G.289
- Metal complexes: A:H.198
CLA.3: 32 residues within 4Å:- Chain A: L.193, H.198, Q.199, V.202, A.203, F.206, G.207, L.210, F.211, F.260, W.278
- Chain D: L.45, F.73, L.74, V.152, F.153, V.156, F.157, F.173, V.175, I.178, F.179, F.181, L.182
- Chain F: L.26
- Ligands: CLA.2, PL9.9, DGD.61, PHO.66, CLA.68, LMG.72, LHG.78
12 PLIP interactions:6 interactions with chain D, 5 interactions with chain A, 1 Ligand-Water interactions- Hydrophobic interactions: D:F.157, D:I.178, D:F.179, D:F.181, D:L.182, D:L.182, A:V.202, A:L.210, A:W.278
- Water bridges: A:H.198
- pi-Stacking: A:F.206
- Metal complexes: H2O.5
CLA.5: 28 residues within 4Å:- Chain A: V.35, I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, Q.113, L.114, F.117, H.118, L.121
- Chain H: L.4, V.8, Y.9, V.11, V.12, T.13, F.15, V.16, L.17
- Ligands: BCR.6, LMG.11, DGD.14, CLA.48, STE.84
17 PLIP interactions:4 interactions with chain H, 13 interactions with chain A,- Hydrophobic interactions: H:V.11, H:V.12, H:F.15, H:F.15, A:P.39, A:T.40, A:F.93, A:P.95, A:I.96, A:W.97, A:W.97, A:L.114, A:F.117, A:L.121
- Hydrogen bonds: A:I.96
- Salt bridges: A:H.118
- Metal complexes: A:H.118
CLA.10: 34 residues within 4Å:- Chain A: T.45, F.48, V.49, I.78, F.119, S.153, A.154, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain D: T.192, H.197, M.198, V.201, A.202, L.205, G.206, L.209
- Chain K: L.30
- Chain O: F.10, I.14, F.17
- Ligands: CLA.2, PHO.4, SQD.13, CLA.68, PL9.71, LHG.73, LHG.88
5 PLIP interactions:3 interactions with chain A, 1 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: A:V.157, A:F.180, A:F.182, D:V.201
- Metal complexes: H2O.4
CLA.17: 14 residues within 4Å:- Chain B: W.185, G.186, P.187, F.190, A.204
- Chain G: F.41, I.44, I.45, I.48, L.55
- Ligands: CLA.18, STE.40, BCR.81, STE.83
9 PLIP interactions:5 interactions with chain G, 3 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: G:F.41, G:F.41, G:I.44, G:I.48, G:L.55, B:W.185, B:P.187, B:F.190
- Metal complexes: H2O.7
CLA.18: 34 residues within 4Å:- Chain B: E.184, W.185, G.189, F.190, P.192, G.197, V.198, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250, V.251, T.255
- Chain D: V.154, L.158, I.159, L.162
- Chain G: F.38, F.41, L.42, I.45, L.46, Y.49
- Ligands: CLA.17, CLA.19, CLA.21, CLA.24, CLA.25, BCR.81, DGD.82
16 PLIP interactions:2 interactions with chain D, 10 interactions with chain B, 4 interactions with chain G,- Hydrophobic interactions: D:L.158, D:I.159, B:W.185, B:F.190, B:F.190, B:A.200, B:A.205, B:V.208, B:F.246, B:F.247, B:F.250, G:F.38, G:I.45, G:Y.49
- Metal complexes: B:H.201
- pi-Stacking: G:F.41
CLA.19: 30 residues within 4Å:- Chain B: R.68, L.69, A.146, L.149, C.150, F.153, L.158, M.166, V.198, H.201, H.202, A.205, A.244, F.247, A.248, V.251, V.252, T.262
- Chain G: M.35, F.38, L.39, L.42
- Ligands: CLA.18, CLA.20, CLA.21, CLA.22, CLA.24, CLA.25, CLA.26, BCR.81
14 PLIP interactions:12 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: B:L.149, B:L.149, B:F.153, B:F.153, B:F.247, B:A.248, B:V.252, G:F.38, G:L.42
- Hydrogen bonds: B:R.68, B:R.68
- Salt bridges: B:R.68
- pi-Cation interactions: B:H.201
- Metal complexes: B:H.202
CLA.20: 30 residues within 4Å:- Chain B: W.33, F.61, V.62, F.65, R.68, L.145, L.148, L.149, V.245, F.246, A.248, A.249, V.252, M.256, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.19, CLA.21, CLA.22, CLA.23, CLA.26, CLA.27, CLA.28, CLA.29, CLA.31, BCR.34, STE.36
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:W.33, B:F.61, B:F.65, B:L.148, B:L.149, B:V.245, B:A.248, B:A.249, B:V.252, B:F.458, B:F.458, B:F.458, B:F.462, B:F.462
- Salt bridges: B:R.68
- Metal complexes: B:H.455
CLA.21: 35 residues within 4Å:- Chain B: T.27, V.30, A.31, W.33, A.34, A.38, V.62, F.65, M.66, R.68, L.69, V.71, V.96, H.100, L.103, L.107, L.143, A.146, G.147, C.150, A.205, G.206, V.208, G.209
- Ligands: CLA.18, CLA.19, CLA.20, CLA.22, CLA.25, CLA.26, CLA.28, CLA.29, CLA.31, BCR.35, STE.36
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:T.27, B:V.30, B:W.33, B:A.34, B:L.69, B:V.96, B:L.103, B:L.143
- Hydrogen bonds: B:M.66
- Water bridges: B:R.68
- Salt bridges: B:R.68
- Metal complexes: B:H.100
CLA.22: 28 residues within 4Å:- Chain B: M.66, L.69, G.70, V.71, F.90, W.91, V.96, L.98, A.99, H.100, V.102, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.19, CLA.20, CLA.21, BCR.35, STE.36, SQD.107, DGD.108
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:L.69, B:V.71, B:F.90, B:F.90, B:W.91, B:L.98, B:V.102, B:L.103, B:L.106, B:L.149, B:L.149, B:F.156, B:F.162, B:F.162
- Salt bridges: B:H.100
- Metal complexes: B:H.157
CLA.23: 40 residues within 4Å:- Chain B: W.33, M.37, Y.40, E.41, T.44, Q.58, G.59, M.60, F.61, L.324, F.325, T.327, G.328, P.329, P.447, W.450, F.451, F.453, A.454, H.455, F.458
- Chain D: F.196, M.199, F.273, T.277, M.281
- Chain K: L.23, L.27, F.31, F.35
- Chain L: F.14
- Ligands: CLA.20, CLA.29, BCR.33, BCR.34, LHG.38, STE.41, PL9.71, LMG.89, BCR.185
13 PLIP interactions:3 interactions with chain K, 9 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: K:L.27, K:F.31, K:F.31, B:Y.40, B:F.61, B:F.325, B:W.450, B:A.454
- Hydrogen bonds: B:Y.40, B:G.328
- Water bridges: B:W.450
- pi-Stacking: B:F.61
- Metal complexes: H2O.12
CLA.24: 37 residues within 4Å:- Chain B: L.229, T.236, S.239, S.240, A.243, A.244, F.246, F.247, F.463, H.466, I.467, G.470, A.471, T.473, L.474
- Chain D: L.36, L.89, L.91, L.116, F.120, I.123, M.126, L.127, F.130, I.150
- Chain G: L.39, L.43, L.46, E.47
- Ligands: CLA.18, CLA.19, CLA.25, CLA.26, LMG.37, CLA.69, STE.76, DGD.82
17 PLIP interactions:6 interactions with chain D, 9 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: D:F.120, D:F.120, D:I.123, D:M.126, D:L.127, D:I.150, B:A.243, B:F.246, B:F.247, B:F.463, B:F.463, B:I.467, B:L.474, G:L.39, G:L.43
- Hydrogen bonds: B:S.239
- Metal complexes: B:H.466
CLA.25: 37 residues within 4Å:- Chain B: F.139, L.143, V.208, I.211, A.212, F.215, H.216, V.219, R.220, P.221, P.222, L.225, L.229, M.231, F.247
- Chain D: F.120, I.123
- Chain G: T.27, T.28, L.30, M.31, F.34, M.35, L.39, L.42, L.43, L.46
- Ligands: CLA.18, CLA.19, CLA.21, CLA.24, CLA.26, LMG.37, LMG.75, BCR.81, DGD.82, STE.83
15 PLIP interactions:10 interactions with chain B, 5 interactions with chain G,- Hydrophobic interactions: B:F.139, B:F.139, B:F.139, B:V.208, B:A.212, B:F.215, B:F.215, B:L.229, G:M.31, G:F.34, G:L.42
- Salt bridges: B:H.216
- Metal complexes: B:H.216
- Hydrogen bonds: G:T.27
- Water bridges: G:T.27
CLA.26: 29 residues within 4Å:- Chain B: L.19, H.23, L.133, L.135, P.136, M.138, F.139, H.142, L.143, L.145, A.146, L.149, L.229, M.231, I.234, T.236, V.237, S.240, S.241, A.244, V.245
- Ligands: CLA.19, CLA.20, CLA.21, CLA.24, CLA.25, CLA.28, CLA.31, BCR.81
12 PLIP interactions:11 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:L.135, B:M.138, B:F.139, B:A.146, B:L.229, B:M.231, B:I.234, B:T.236, B:V.237, B:A.244
- Hydrogen bonds: B:H.142
- Metal complexes: H2O.10
CLA.27: 28 residues within 4Å:- Chain B: W.5, Y.6, R.7, V.8, H.9, T.10, I.13, E.235, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472, F.479
- Chain L: F.21
- Ligands: CLA.20, CLA.28, CLA.29, CLA.30, BCR.33, BCR.34, LHG.38, LHG.88
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:T.10, B:L.238, B:L.238, B:I.242, B:F.462, B:F.464
- Hydrogen bonds: B:H.9, B:W.468
- Salt bridges: B:H.9, B:R.472
- pi-Stacking: B:W.468
- Metal complexes: B:H.469
CLA.28: 25 residues within 4Å:- Chain B: H.9, T.10, L.12, I.13, L.19, A.22, H.23, H.26, T.27, V.30, I.234, E.235, V.237, L.238, S.241, I.242, V.245, A.248
- Ligands: CLA.20, CLA.21, CLA.26, CLA.27, CLA.29, CLA.30, CLA.31
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:H.9, B:L.12, B:L.12, B:L.19, B:H.23, B:H.26, B:I.234, B:I.234, B:V.237, B:L.238
- Hydrogen bonds: B:S.241
- Salt bridges: B:H.23
- Metal complexes: B:H.23
CLA.29: 20 residues within 4Å:- Chain B: H.9, H.26, L.29, V.30, W.33, V.245, F.458, L.461, F.462
- Chain L: F.14
- Ligands: CLA.20, CLA.21, CLA.23, CLA.27, CLA.28, CLA.30, BCR.33, BCR.34, LHG.38, LMG.89
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:V.30, B:V.30, B:W.33, B:W.33, B:F.462
- Salt bridges: B:H.9
- Metal complexes: B:H.26
CLA.30: 28 residues within 4Å:- Chain 5: L.16
- Chain 8: F.8
- Chain B: L.3, V.8, H.9, V.11, L.12, A.22, M.25, H.26, L.29, W.115
- Chain K: Q.8, V.10
- Chain L: L.13, F.21, L.25
- Ligands: CLA.27, CLA.28, CLA.29, BCR.33, SQD.39, STE.41, LHG.88, LMG.89, STE.90, STE.184, BCR.185
10 PLIP interactions:8 interactions with chain B, 2 interactions with chain L,- Hydrophobic interactions: B:V.8, B:V.8, B:V.8, B:L.12, B:M.25, B:L.29, B:W.115, L:L.13, L:F.21
- Metal complexes: B:H.9
CLA.31: 26 residues within 4Å:- Chain B: P.16, L.19, I.20, H.23, L.24, T.27, L.103, L.107, L.122, F.123, L.133, M.138, I.141, H.142, L.145
- Chain G: L.7, L.11, L.14, N.15
- Ligands: CLA.20, CLA.21, CLA.26, CLA.28, CLA.32, BCR.35, STE.36
11 PLIP interactions:6 interactions with chain B, 5 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.133, B:I.141, B:L.145, G:L.7, G:L.11, G:L.11, G:L.14, G:L.14
- Hydrogen bonds: B:H.23
- Metal complexes: B:H.142
CLA.32: 17 residues within 4Å:- Chain B: I.20, L.24, L.107, A.110, W.113, H.114, L.120, L.122, F.123
- Chain G: T.5, W.6, L.7, G.8, L.11
- Ligands: CLA.31, BCR.35, SQD.107
12 PLIP interactions:8 interactions with chain B, 4 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.24, B:W.113, B:W.113, B:L.120, B:L.122, G:L.7, G:L.11
- pi-Stacking: B:W.113
- Metal complexes: B:H.114
- Hydrogen bonds: G:T.5
- Water bridges: G:W.6
CLA.44: 31 residues within 4Å:- Chain C: T.82, L.83, L.156, G.159, A.160, L.163, L.173, L.201, W.211, I.212, V.215, L.218, V.221, H.225, I.228, C.232, A.266, M.269, M.270, I.273, A.274, F.277, V.284, Y.285
- Ligands: CLA.45, CLA.46, CLA.48, CLA.49, CLA.50, CLA.55, BCR.57
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:A.160, C:L.163, C:W.211, C:I.212, C:I.228, C:A.266, C:M.270, C:F.277, C:V.284, C:V.284
- Hydrogen bonds: C:Y.285
- Metal complexes: C:H.225
CLA.45: 31 residues within 4Å:- Chain C: W.51, I.75, L.76, H.79, L.83, W.85, G.159, L.162, L.163, A.165, K.166, F.170, L.267, S.268, M.270, G.271, A.274, V.278, Y.285, L.414, H.418, L.421, A.422, F.425
- Ligands: CLA.44, CLA.46, CLA.47, CLA.52, CLA.53, CLA.55, LMG.62
11 PLIP interactions:11 interactions with chain C,- Hydrophobic interactions: C:W.51, C:I.75, C:L.267, C:M.270, C:A.274, C:L.414, C:L.421, C:F.425
- Salt bridges: C:H.79, C:H.418
- Metal complexes: C:H.418
CLA.46: 24 residues within 4Å:- Chain C: A.45, I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106, L.162, L.267, M.270
- Ligands: CLA.44, CLA.45, CLA.50, CLA.52, CLA.53, CLA.55, CLA.56, STE.64
7 PLIP interactions:7 interactions with chain C,- Hydrophobic interactions: C:V.49, C:A.52, C:L.83, C:V.102, C:L.267
- Salt bridges: C:H.79
- Metal complexes: C:H.106
CLA.47: 32 residues within 4Å:- Chain A: F.197, F.285
- Chain C: W.51, M.55, F.58, E.59, H.62, Q.72, G.73, L.74, I.75, L.392, S.394, P.410, W.413, L.414, S.417, H.418, V.420, L.421, F.424
- Chain J: P.26, V.27, P.29, V.30
- Ligands: CLA.45, CLA.51, CLA.53, DGD.60, DGD.61, LMG.62, LHG.74
8 PLIP interactions:6 interactions with chain C, 1 interactions with chain J, 1 Ligand-Water interactions,- Hydrophobic interactions: C:F.58, C:I.75, C:W.413, C:W.413, C:W.413, J:V.30
- Hydrogen bonds: C:S.394
- Metal complexes: H2O.18
CLA.48: 33 residues within 4Å:- Chain A: F.33, I.36, L.121, S.124, C.125, M.127, G.128, W.131
- Chain C: F.252, I.253, A.258, S.261, Y.262, G.265, A.266, M.269, L.426, H.429, L.430, A.433, G.434, A.436, R.437
- Chain H: V.12, V.16, F.19, F.23
- Ligands: CLA.5, LMG.11, CLA.44, CLA.50, BCR.57, DGD.59
13 PLIP interactions:7 interactions with chain C, 1 interactions with chain H, 5 interactions with chain A,- Hydrophobic interactions: C:Y.262, C:Y.262, C:L.430, H:F.23, A:F.33, A:F.33, A:W.131, A:W.131, A:W.131
- Water bridges: C:I.253, C:I.253
- Salt bridges: C:R.437
- Metal complexes: C:H.429
CLA.49: 28 residues within 4Å:- Chain C: T.146, L.149, L.153, L.201, L.202, W.211, I.231, C.232, A.234, G.235, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252, W.254, M.269
- Chain H: V.20, L.24
- Ligands: LMG.11, CLA.44, CLA.50, BCR.57, DGD.59
8 PLIP interactions:8 interactions with chain C,- Hydrophobic interactions: C:L.149, C:L.149, C:L.153, C:L.153, C:W.238
- Hydrogen bonds: C:F.245
- Salt bridges: C:H.239
- Metal complexes: C:H.239
CLA.50: 28 residues within 4Å:- Chain C: W.139, K.142, M.145, T.146, I.148, L.149, H.152, L.153, L.156, I.228, I.231, C.232, P.244, W.247, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.44, CLA.46, CLA.48, CLA.49, CLA.52, BCR.57
13 PLIP interactions:12 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:M.145, C:T.146, C:L.156, C:F.252, C:F.252, C:W.254, C:Y.259, C:Y.259, C:Y.262, C:Y.262, C:A.266
- Hydrogen bonds: C:H.152
- Metal complexes: H2O.15
CLA.51: 31 residues within 4Å:- Chain C: F.21, W.23, W.24, A.25, G.26, N.27, A.28, I.31, E.257, L.260, L.264, L.267, F.424, F.425, V.427, G.428, W.431, H.432, R.435
- Chain J: V.30, L.33, F.37
- Ligands: SQD.12, CLA.47, CLA.52, CLA.53, CLA.54, DGD.60, DGD.61, LMG.62, LHG.74
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:L.260, C:L.260, C:L.264, C:F.425, C:W.431
- Hydrogen bonds: C:N.27, C:W.431
- Salt bridges: C:H.432, C:R.435
- Metal complexes: C:H.432
CLA.52: 30 residues within 4Å:- Chain C: N.27, A.28, L.30, I.31, L.37, A.40, H.41, H.44, I.48, Y.137, W.139, M.145, I.148, H.152, L.156, G.256, E.257, Y.259, L.260, S.263, L.264, L.267, F.425
- Ligands: CLA.45, CLA.46, CLA.50, CLA.51, CLA.53, CLA.54, CLA.55
14 PLIP interactions:14 interactions with chain C,- Hydrophobic interactions: C:N.27, C:L.30, C:I.31, C:A.40, C:H.44, C:Y.137, C:W.139, C:W.139, C:I.148, C:L.156, C:Y.259, C:L.260
- Hydrogen bonds: C:S.263
- Metal complexes: C:H.41
CLA.53: 21 residues within 4Å:- Chain C: N.27, H.44, L.47, I.48, W.51, L.267, L.421, F.424, F.425
- Chain J: P.29, V.30, F.32, L.33
- Ligands: CLA.45, CLA.46, CLA.47, CLA.51, CLA.52, CLA.54, LMG.62, LHG.74
11 PLIP interactions:2 interactions with chain J, 9 interactions with chain C,- Hydrophobic interactions: J:P.29, J:L.33, C:L.47, C:I.48, C:W.51, C:L.267, C:L.421, C:F.424, C:F.425
- Hydrogen bonds: C:N.27
- Metal complexes: C:H.44
CLA.54: 42 residues within 4Å:- Chain C: W.23, W.24, G.26, N.27, R.29, L.30, L.33, K.36, L.37, A.40, A.43, H.44, L.47, A.111, G.114, F.115, V.118, A.121, I.122
- Chain J: F.32, L.33, L.35, A.36, F.37, W.39, Q.40, R.46
- Chain S: I.35, I.36, L.39, N.45, L.46
- Chain T: M.19, V.20, V.23, P.24, A.28
- Ligands: CLA.51, CLA.52, CLA.53, BCR.58, BCR.96
13 PLIP interactions:5 interactions with chain J, 4 interactions with chain C, 2 interactions with chain S, 2 interactions with chain T,- Hydrophobic interactions: J:F.32, J:L.33, J:W.39, J:Q.40, C:A.40, C:F.115, C:A.121, S:I.36, S:L.46, T:V.20, T:A.28
- pi-Stacking: J:W.39
- Hydrogen bonds: C:R.29
CLA.55: 24 residues within 4Å:- Chain C: L.38, H.41, V.42, A.45, L.113, L.128, F.134, F.135, Y.137, I.148, F.151, H.152, I.154, V.155, L.156, I.158, G.159, L.162
- Ligands: CLA.44, CLA.45, CLA.46, CLA.52, CLA.56, BCR.86
11 PLIP interactions:11 interactions with chain C,- Hydrophobic interactions: C:L.38, C:H.41, C:L.128, C:F.134, C:F.135, C:F.151, C:I.154, C:V.155, C:I.158, C:I.158
- Metal complexes: C:H.152
CLA.56: 17 residues within 4Å:- Chain C: L.38, V.42, V.112, L.113, F.115, G.116, Y.119, H.120, G.124, P.125, L.128, Y.131, F.135
- Ligands: CLA.46, CLA.55, STE.64, BCR.86
9 PLIP interactions:9 interactions with chain C,- Hydrophobic interactions: C:L.38, C:V.42, C:V.112, C:L.128, C:Y.131, C:F.135, C:F.135
- pi-Stacking: C:Y.119
- Metal complexes: C:H.120
CLA.68: 35 residues within 4Å:- Chain A: M.183, V.205, F.206
- Chain D: L.45, W.48, L.122, F.146, P.149, V.152, F.153, S.155, V.156, F.157, F.181, L.182, L.183, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, L.279, S.282, A.283, V.286
- Ligands: CLA.2, CLA.3, PL9.9, CLA.10, PHO.66, LMG.72
14 PLIP interactions:14 interactions with chain D,- Hydrophobic interactions: D:L.122, D:V.152, D:F.181, D:L.182, D:F.185, D:Q.186, D:T.192, D:V.201, D:V.204, D:V.204, D:L.205, D:L.279
- pi-Stacking: D:W.191
- Metal complexes: D:H.197
CLA.69: 35 residues within 4Å:- Chain D: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, G.109, T.112, F.113, L.116, H.117, F.120
- Chain G: G.36, L.39, V.40, L.43
- Chain R: G.13, L.14, L.15, G.17, A.18, V.20, L.21
- Ligands: PL9.9, CLA.24, LMG.37, BCR.70, LMG.75, STE.76, SQD.80
18 PLIP interactions:12 interactions with chain D, 5 interactions with chain R, 1 interactions with chain G,- Hydrophobic interactions: D:L.36, D:P.39, D:L.43, D:W.93, D:W.93, D:L.116, D:F.120, R:L.14, R:L.14, R:L.15, R:A.18, R:V.20, G:L.43
- Hydrogen bonds: D:L.92
- Water bridges: D:W.93
- Salt bridges: D:H.117
- pi-Stacking: D:F.113
- Metal complexes: D:H.117
CLA.98: 36 residues within 4Å:- Chain 8: F.17
- Chain U: F.119, A.123, Y.147, P.150, L.151, S.153, A.154, A.156, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, A.287, I.290
- Chain X: L.182, L.183, V.204, L.205, F.257
- Ligands: CLA.99, PHO.162, CLA.164, CLA.165, LHG.170
17 PLIP interactions:1 interactions with chain 8, 13 interactions with chain U, 3 interactions with chain X,- Hydrophobic interactions: 8:F.17, U:P.150, U:F.186, U:Q.187, U:I.192, U:I.192, U:L.193, U:L.193, U:V.202, U:V.205, U:F.206, X:L.182, X:L.205, X:F.257
- Hydrogen bonds: U:T.286
- Water bridges: U:I.290
- Metal complexes: U:H.198
CLA.99: 32 residues within 4Å:- Chain U: L.193, H.198, Q.199, V.202, A.203, F.206, G.207, L.210, F.211, F.260, W.278
- Chain X: L.45, F.73, L.74, V.152, F.153, V.156, F.157, F.173, V.175, I.178, F.179, F.181, L.182
- Chain Z: L.26
- Ligands: CLA.98, PL9.105, DGD.156, PHO.163, CLA.164, LMG.173, LHG.175
10 PLIP interactions:4 interactions with chain X, 4 interactions with chain U, 1 interactions with chain Z, 1 Ligand-Water interactions,- Hydrophobic interactions: X:F.179, X:F.181, X:L.182, X:L.182, U:V.202, U:F.206, U:L.210, U:W.278, Z:L.26
- Metal complexes: H2O.43
CLA.100: 28 residues within 4Å:- Chain 1: L.4, I.6, V.8, Y.9, I.10, V.11, V.12, T.13, F.15, V.16
- Chain U: V.35, I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, Q.113, L.114, F.117, H.118, L.121
- Ligands: BCR.101, DGD.108, CLA.142, LMG.160
22 PLIP interactions:9 interactions with chain 1, 13 interactions with chain U,- Hydrophobic interactions: 1:I.6, 1:Y.9, 1:I.10, 1:V.11, 1:V.12, 1:V.12, 1:T.13, 1:F.15, 1:F.15, U:I.36, U:P.39, U:T.40, U:F.93, U:P.95, U:I.96, U:W.97, U:W.97, U:L.114, U:F.117
- Hydrogen bonds: U:I.96
- Salt bridges: U:H.118
- Metal complexes: U:H.118
CLA.113: 16 residues within 4Å:- Chain 0: F.34, L.37, F.41, I.44, I.45, I.48, L.55
- Chain V: E.184, W.185, G.186, P.187, F.190, A.204, V.208
- Ligands: CLA.114, BCR.178
11 PLIP interactions:5 interactions with chain 0, 5 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: 0:L.37, 0:F.41, 0:F.41, 0:I.44, 0:L.55, V:W.185, V:P.187, V:F.190, V:F.190, V:F.190
- Metal complexes: H2O.44
CLA.114: 34 residues within 4Å:- Chain 0: F.38, F.41, L.42, I.45, L.46, Y.49
- Chain V: E.184, W.185, G.189, F.190, P.192, G.197, V.198, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250, V.251, T.255
- Chain X: V.154, L.158, I.159, L.162
- Ligands: CLA.113, CLA.115, CLA.117, CLA.120, CLA.121, BCR.178, DGD.179
16 PLIP interactions:4 interactions with chain 0, 10 interactions with chain V, 2 interactions with chain X,- Hydrophobic interactions: 0:F.38, 0:F.41, 0:I.45, V:F.190, V:F.190, V:A.200, V:A.204, V:V.208, V:V.208, V:F.247, V:F.247, V:F.250, X:I.159, X:L.162
- pi-Stacking: 0:F.41
- Metal complexes: V:H.201
CLA.115: 30 residues within 4Å:- Chain 0: M.35, F.38, L.39, L.42
- Chain V: R.68, L.69, A.146, L.149, C.150, F.153, L.158, M.166, V.198, H.201, H.202, A.205, A.244, F.247, A.248, V.251, V.252, T.262
- Ligands: CLA.114, CLA.116, CLA.117, CLA.118, CLA.120, CLA.121, CLA.122, BCR.178
14 PLIP interactions:11 interactions with chain V, 3 interactions with chain 0,- Hydrophobic interactions: V:F.153, V:F.153, V:F.247, V:A.248, V:V.252, 0:F.38, 0:L.39, 0:L.42
- Hydrogen bonds: V:R.68, V:R.68
- Salt bridges: V:R.68
- pi-Stacking: V:F.153
- pi-Cation interactions: V:H.201
- Metal complexes: V:H.202
CLA.116: 30 residues within 4Å:- Chain V: W.33, F.61, V.62, F.65, R.68, L.145, L.148, L.149, V.245, F.246, A.248, A.249, V.252, M.256, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.115, CLA.117, CLA.118, CLA.119, CLA.122, CLA.123, CLA.124, CLA.125, CLA.127, BCR.130, STE.133
16 PLIP interactions:16 interactions with chain V,- Hydrophobic interactions: V:W.33, V:F.61, V:F.65, V:L.145, V:V.245, V:A.248, V:A.249, V:V.252, V:F.458, V:F.458, V:F.458, V:F.458, V:F.462, V:F.462
- Salt bridges: V:R.68
- Metal complexes: V:H.455
CLA.117: 35 residues within 4Å:- Chain V: T.27, V.30, A.31, W.33, A.34, A.38, V.62, F.65, M.66, R.68, L.69, V.71, V.96, H.100, L.103, L.107, L.143, A.146, G.147, C.150, A.205, G.206, V.208, G.209
- Ligands: CLA.114, CLA.115, CLA.116, CLA.118, CLA.121, CLA.122, CLA.124, CLA.125, CLA.127, BCR.131, STE.133
13 PLIP interactions:13 interactions with chain V,- Hydrophobic interactions: V:T.27, V:V.30, V:A.31, V:W.33, V:A.34, V:L.69, V:V.96, V:L.103, V:L.143
- Hydrogen bonds: V:M.66
- Water bridges: V:R.68
- Salt bridges: V:R.68
- Metal complexes: V:H.100
CLA.118: 29 residues within 4Å:- Chain V: M.66, L.69, G.70, V.71, F.90, W.91, V.96, L.98, A.99, H.100, V.102, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: SQD.13, DGD.14, STE.84, CLA.115, CLA.116, CLA.117, BCR.131, STE.133
14 PLIP interactions:14 interactions with chain V,- Hydrophobic interactions: V:L.69, V:V.71, V:F.90, V:W.91, V:W.91, V:L.98, V:L.103, V:L.103, V:L.149, V:F.156, V:F.162, V:F.162
- Salt bridges: V:H.100
- Metal complexes: V:H.157
CLA.119: 39 residues within 4Å:- Chain 4: L.23, L.27, F.31, F.35
- Chain 5: F.14
- Chain V: W.33, M.37, Y.40, E.41, T.44, Q.58, G.59, M.60, F.61, L.324, F.325, T.327, G.328, P.329, P.447, W.450, F.451, F.453, A.454, H.455, F.458
- Chain X: F.196, M.199, T.277, M.281
- Ligands: BCR.92, STE.94, CLA.116, CLA.125, BCR.129, BCR.130, LMG.132, PL9.168, LHG.169
15 PLIP interactions:10 interactions with chain V, 2 interactions with chain 4, 1 interactions with chain X, 1 interactions with chain 5, 1 Ligand-Water interactions,- Hydrophobic interactions: V:Y.40, V:F.61, V:F.325, V:P.447, V:W.450, V:A.454, 4:F.31, 4:F.31, X:F.196, 5:F.14
- Hydrogen bonds: V:Y.40, V:G.328
- Water bridges: V:W.450
- pi-Stacking: V:F.61
- Metal complexes: H2O.50
CLA.120: 35 residues within 4Å:- Chain 0: L.39, L.43, L.46
- Chain V: L.229, T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, G.470, A.471, T.473, L.474
- Chain X: L.36, L.89, L.91, L.116, F.120, I.123, M.126, L.127, F.130, I.150
- Ligands: CLA.114, CLA.115, CLA.121, CLA.122, STE.135, CLA.166, STE.174, DGD.179
18 PLIP interactions:8 interactions with chain X, 10 interactions with chain V,- Hydrophobic interactions: X:L.36, X:L.89, X:F.120, X:I.123, X:I.123, X:M.126, X:L.127, X:I.150, V:A.243, V:F.246, V:F.247, V:F.463, V:F.463, V:I.467, V:L.474
- Hydrogen bonds: V:S.239
- Salt bridges: V:H.466
- Metal complexes: V:H.466
CLA.121: 36 residues within 4Å:- Chain 0: T.27, T.28, L.30, M.31, F.34, M.35, L.39, L.42, L.43, L.46
- Chain V: F.139, L.143, V.208, I.211, A.212, F.215, H.216, V.219, R.220, P.221, P.222, L.225, L.229, M.231, F.247
- Chain X: F.120, I.123
- Ligands: CLA.114, CLA.115, CLA.117, CLA.120, CLA.122, STE.135, LMG.172, BCR.178, DGD.179
16 PLIP interactions:11 interactions with chain V, 4 interactions with chain 0, 1 interactions with chain X,- Hydrophobic interactions: V:F.139, V:F.139, V:F.139, V:V.208, V:A.212, V:F.215, V:F.215, V:L.225, V:L.229, 0:M.31, 0:F.34, 0:L.42, 0:L.43, X:F.120
- Salt bridges: V:H.216
- Metal complexes: V:H.216
CLA.122: 28 residues within 4Å:- Chain V: L.19, H.23, L.135, P.136, M.138, F.139, H.142, L.143, L.145, A.146, L.149, L.229, M.231, I.234, T.236, V.237, S.240, S.241, A.244, V.245
- Ligands: CLA.115, CLA.116, CLA.117, CLA.120, CLA.121, CLA.124, CLA.127, BCR.178
8 PLIP interactions:7 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: V:L.135, V:M.138, V:M.231, V:I.234, V:T.236, V:V.237
- Hydrogen bonds: V:H.142
- Metal complexes: H2O.46
CLA.123: 28 residues within 4Å:- Chain 5: F.21
- Chain V: W.5, Y.6, R.7, V.8, H.9, T.10, I.13, E.235, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472, F.479
- Ligands: CLA.116, CLA.124, CLA.125, CLA.126, BCR.129, BCR.130, LHG.169, LHG.182
15 PLIP interactions:14 interactions with chain V, 1 interactions with chain 5,- Hydrophobic interactions: V:W.5, V:H.9, V:T.10, V:L.238, V:L.238, V:I.242, V:F.462, V:F.464, 5:F.21
- Hydrogen bonds: V:H.9, V:W.468
- Salt bridges: V:H.9, V:R.472
- pi-Stacking: V:W.468
- Metal complexes: V:H.469
CLA.124: 25 residues within 4Å:- Chain V: H.9, T.10, L.12, I.13, L.19, A.22, H.23, H.26, T.27, V.30, I.234, E.235, V.237, L.238, S.241, I.242, V.245, A.248
- Ligands: CLA.116, CLA.117, CLA.122, CLA.123, CLA.125, CLA.126, CLA.127
14 PLIP interactions:14 interactions with chain V,- Hydrophobic interactions: V:L.12, V:L.12, V:I.13, V:L.19, V:A.22, V:H.23, V:H.26, V:T.27, V:V.237, V:L.238, V:L.238
- Hydrogen bonds: V:S.241
- Salt bridges: V:H.23
- Metal complexes: V:H.23
CLA.125: 20 residues within 4Å:- Chain 5: F.14
- Chain V: H.9, H.26, L.29, V.30, W.33, V.245, F.458, L.461, F.462
- Ligands: CLA.116, CLA.117, CLA.119, CLA.123, CLA.124, CLA.126, BCR.129, BCR.130, LMG.132, LHG.169
8 PLIP interactions:7 interactions with chain V, 1 interactions with chain 5,- Hydrophobic interactions: V:V.30, V:W.33, V:W.33, V:F.462, V:F.462, 5:F.14
- Salt bridges: V:H.9
- Metal complexes: V:H.26
CLA.126: 29 residues within 4Å:- Chain 4: Q.8, V.10
- Chain 5: L.13, V.17, F.21, L.25
- Chain L: L.16
- Chain O: F.8
- Chain V: L.3, V.8, H.9, V.11, L.12, A.22, M.25, H.26, L.29, W.115
- Ligands: SQD.87, STE.91, BCR.92, STE.94, CLA.123, CLA.124, CLA.125, BCR.129, LMG.132, LHG.182, STE.183
8 PLIP interactions:2 interactions with chain 5, 6 interactions with chain V,- Hydrophobic interactions: 5:F.21, 5:L.25, V:V.8, V:V.8, V:L.12, V:L.29, V:W.115
- Metal complexes: V:H.9
CLA.127: 25 residues within 4Å:- Chain 0: L.7, L.11, L.14, N.15
- Chain V: P.16, L.19, I.20, H.23, L.24, T.27, L.103, L.107, L.122, F.123, L.133, M.138, I.141, H.142, L.145
- Ligands: CLA.116, CLA.117, CLA.122, CLA.124, CLA.128, BCR.131
10 PLIP interactions:5 interactions with chain 0, 5 interactions with chain V,- Hydrophobic interactions: 0:L.7, 0:L.11, 0:L.11, 0:L.14, 0:L.14, V:I.20, V:L.133, V:L.145
- Hydrogen bonds: V:H.23
- Metal complexes: V:H.142
CLA.128: 17 residues within 4Å:- Chain 0: T.5, W.6, L.7, G.8, L.11
- Chain V: I.20, L.24, L.107, A.110, W.113, H.114, L.120, L.122, F.123
- Ligands: SQD.13, CLA.127, BCR.131
12 PLIP interactions:4 interactions with chain 0, 8 interactions with chain V,- Hydrophobic interactions: 0:L.7, 0:L.11, V:I.20, V:L.24, V:W.113, V:W.113, V:L.120, V:F.123
- Hydrogen bonds: 0:T.5
- Water bridges: 0:L.7
- pi-Stacking: V:W.113
- Metal complexes: V:H.114
CLA.138: 30 residues within 4Å:- Chain W: T.82, L.83, L.156, G.159, A.160, L.163, L.173, W.211, I.212, V.215, L.218, V.221, H.225, I.228, C.232, A.266, M.269, M.270, I.273, A.274, F.277, V.284, Y.285
- Ligands: CLA.139, CLA.140, CLA.142, CLA.143, CLA.144, CLA.149, BCR.152
10 PLIP interactions:10 interactions with chain W,- Hydrophobic interactions: W:A.160, W:L.163, W:W.211, W:I.212, W:I.228, W:A.266, W:M.270, W:V.284
- Hydrogen bonds: W:Y.285
- Metal complexes: W:H.225
CLA.139: 33 residues within 4Å:- Chain W: W.51, I.75, L.76, H.79, L.83, W.85, G.159, L.162, L.163, A.165, K.166, F.170, L.267, S.268, M.270, G.271, A.274, T.275, V.278, Y.285, L.414, H.418, L.421, A.422, F.425
- Ligands: CLA.138, CLA.140, CLA.141, CLA.146, CLA.147, CLA.149, LMG.157, STE.158
14 PLIP interactions:14 interactions with chain W,- Hydrophobic interactions: W:W.51, W:W.51, W:I.75, W:L.76, W:L.83, W:K.166, W:F.170, W:L.267, W:A.274, W:L.414, W:F.425
- Salt bridges: W:H.79, W:H.418
- Metal complexes: W:H.418
CLA.140: 25 residues within 4Å:- Chain W: A.45, I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106, L.113, L.162, L.267, M.270
- Ligands: CLA.138, CLA.139, CLA.144, CLA.146, CLA.147, CLA.149, CLA.150, STE.158
5 PLIP interactions:5 interactions with chain W,- Hydrophobic interactions: W:V.49, W:A.52, W:L.83
- Salt bridges: W:H.79
- Metal complexes: W:H.106
CLA.141: 32 residues within 4Å:- Chain 3: P.26, V.27, P.29, V.30
- Chain U: F.197, F.285
- Chain W: W.51, M.55, F.58, E.59, H.62, Q.72, G.73, L.74, I.75, L.392, S.394, P.410, W.413, L.414, S.417, H.418, V.420, L.421, F.424
- Ligands: CLA.139, CLA.145, CLA.147, DGD.155, DGD.156, LMG.157, LHG.171
9 PLIP interactions:7 interactions with chain W, 1 interactions with chain 3, 1 Ligand-Water interactions,- Hydrophobic interactions: W:W.51, W:I.75, W:W.413, W:W.413, W:W.413, W:V.420, 3:V.30
- Water bridges: W:S.394
- Metal complexes: H2O.56
CLA.142: 34 residues within 4Å:- Chain 1: V.12, V.16, F.19, F.23
- Chain U: F.33, I.36, L.121, S.124, C.125, M.127, G.128, W.131
- Chain W: F.252, I.253, A.258, S.261, Y.262, G.265, A.266, S.268, M.269, L.426, H.429, L.430, A.433, G.434, A.436, R.437
- Ligands: CLA.100, CLA.138, CLA.144, BCR.152, DGD.154, LMG.160
17 PLIP interactions:9 interactions with chain W, 2 interactions with chain 1, 6 interactions with chain U,- Hydrophobic interactions: W:F.252, W:Y.262, W:Y.262, W:L.426, W:L.430, 1:V.16, 1:F.23, U:F.33, U:L.121, U:W.131, U:W.131, U:W.131, U:W.131
- Water bridges: W:I.253, W:I.253
- Salt bridges: W:R.437
- Metal complexes: W:H.429
CLA.143: 26 residues within 4Å:- Chain 1: V.20, L.24
- Chain W: T.146, L.149, L.153, L.201, L.202, W.211, I.231, C.232, A.234, G.235, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252, W.254
- Ligands: CLA.138, CLA.144, BCR.152, LMG.160
8 PLIP interactions:8 interactions with chain W,- Hydrophobic interactions: W:L.149, W:L.153, W:L.153, W:I.231, W:W.238
- Hydrogen bonds: W:F.245
- Salt bridges: W:H.239
- Metal complexes: W:H.239
CLA.144: 27 residues within 4Å:- Chain W: K.142, M.145, T.146, I.148, L.149, H.152, L.153, L.156, I.228, I.231, C.232, P.244, W.247, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.138, CLA.140, CLA.142, CLA.143, CLA.146, BCR.152
14 PLIP interactions:13 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: W:M.145, W:T.146, W:L.156, W:I.228, W:F.252, W:F.252, W:W.254, W:Y.259, W:Y.259, W:Y.262, W:Y.262, W:A.266
- Hydrogen bonds: W:H.152
- Metal complexes: H2O.52
CLA.145: 29 residues within 4Å:- Chain 3: L.33, F.37
- Chain W: F.21, W.23, W.24, A.25, G.26, N.27, A.28, I.31, E.257, L.260, L.264, F.424, F.425, V.427, G.428, W.431, H.432, R.435
- Ligands: SQD.106, CLA.141, CLA.146, CLA.147, CLA.148, DGD.155, DGD.156, LMG.157, LHG.171
10 PLIP interactions:10 interactions with chain W,- Hydrophobic interactions: W:L.260, W:L.260, W:F.425, W:W.431
- Hydrogen bonds: W:N.27, W:W.431
- Salt bridges: W:H.432, W:R.435
- pi-Stacking: W:W.431
- Metal complexes: W:H.432
CLA.146: 30 residues within 4Å:- Chain W: N.27, A.28, L.30, I.31, L.37, A.40, H.41, H.44, I.48, Y.137, W.139, M.145, I.148, H.152, L.156, G.256, E.257, Y.259, L.260, S.263, L.264, L.267, F.425
- Ligands: CLA.139, CLA.140, CLA.144, CLA.145, CLA.147, CLA.148, CLA.149
10 PLIP interactions:10 interactions with chain W,- Hydrophobic interactions: W:N.27, W:L.37, W:A.40, W:H.44, W:W.139, W:W.139, W:I.148, W:Y.259
- Hydrogen bonds: W:S.263
- Metal complexes: W:H.41
CLA.147: 21 residues within 4Å:- Chain 3: P.29, V.30, F.32, L.33
- Chain W: N.27, H.44, L.47, I.48, W.51, L.267, L.421, F.424, F.425
- Ligands: CLA.139, CLA.140, CLA.141, CLA.145, CLA.146, CLA.148, LMG.157, LHG.171
11 PLIP interactions:3 interactions with chain 3, 8 interactions with chain W,- Hydrophobic interactions: 3:P.29, 3:V.30, 3:L.33, W:I.48, W:W.51, W:W.51, W:L.267, W:L.421, W:F.425
- Hydrogen bonds: W:N.27
- Metal complexes: W:H.44
CLA.148: 45 residues within 4Å:- Chain 3: F.32, L.33, L.35, A.36, F.37, W.39, Q.40
- Chain W: T.12, N.13, R.14, W.23, W.24, G.26, N.27, R.29, L.30, L.33, K.36, L.37, G.39, A.40, A.43, H.44, L.47, A.111, G.114, F.115, V.118, A.121, I.122
- Ligands: CLA.145, CLA.146, CLA.147, BCR.153, BCR.181
- Chain c: I.35, I.36, L.39, N.45, L.46
- Chain d: M.19, V.20, V.23, P.24, A.28
25 PLIP interactions:5 interactions with chain d, 8 interactions with chain 3, 4 interactions with chain c, 8 interactions with chain W,- Hydrophobic interactions: d:V.20, d:V.20, d:P.24, d:P.24, d:A.28, 3:F.32, 3:F.32, 3:L.33, 3:A.36, 3:W.39, 3:W.39, 3:Q.40, c:I.35, c:I.36, c:L.39, c:L.46, W:L.30, W:L.30, W:L.47, W:A.121, W:I.122
- pi-Stacking: 3:W.39
- Hydrogen bonds: W:R.14, W:R.29
- Salt bridges: W:R.14
CLA.149: 26 residues within 4Å:- Chain W: L.38, H.41, V.42, A.45, L.113, L.128, F.134, F.135, Y.137, K.144, I.148, F.151, H.152, I.154, V.155, L.156, I.158, G.159, L.162
- Ligands: CLA.138, CLA.139, CLA.140, CLA.146, CLA.150, BCR.151, LMG.159
11 PLIP interactions:11 interactions with chain W,- Hydrophobic interactions: W:H.41, W:F.134, W:Y.137, W:I.148, W:F.151, W:F.151, W:I.154, W:I.158, W:I.158, W:L.162
- Metal complexes: W:H.152
CLA.150: 17 residues within 4Å:- Chain W: L.38, V.42, V.112, L.113, F.115, G.116, Y.119, H.120, P.125, L.128, Y.131, S.132, F.135
- Ligands: CLA.140, CLA.149, BCR.151, STE.158
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:L.38, W:L.38, W:V.42, W:V.112, W:Y.119, W:Y.119, W:L.128, W:Y.131, W:F.135, W:F.135, W:F.135
- Hydrogen bonds: W:Y.131
- Metal complexes: W:H.120
CLA.164: 34 residues within 4Å:- Chain U: M.183, V.205, F.206
- Chain X: L.45, W.48, L.122, F.146, P.149, V.152, F.153, S.155, V.156, F.157, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, L.279, S.282, A.283, V.286
- Ligands: CLA.98, CLA.99, PL9.105, PHO.163, CLA.165, LMG.173
13 PLIP interactions:11 interactions with chain X, 2 interactions with chain U,- Hydrophobic interactions: X:V.152, X:F.181, X:L.182, X:F.185, X:Q.186, X:W.191, X:T.192, X:V.201, X:V.204, U:F.206, U:F.206
- pi-Stacking: X:W.191
- Metal complexes: X:H.197
CLA.165: 34 residues within 4Å:- Chain 4: L.30
- Chain 8: F.10, I.14, F.17
- Chain U: T.45, F.48, V.49, I.78, F.119, S.153, A.154, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain X: T.192, H.197, M.198, V.201, A.202, L.205, G.206, L.209
- Ligands: CLA.98, SQD.107, PHO.162, CLA.164, PL9.168, LHG.170, LHG.182
7 PLIP interactions:4 interactions with chain U, 1 interactions with chain 8, 1 interactions with chain X, 1 Ligand-Water interactions,- Hydrophobic interactions: U:T.45, U:V.157, U:F.158, U:F.180, 8:I.14, X:L.209
- Metal complexes: H2O.60
CLA.166: 36 residues within 4Å:- Chain 0: A.32, V.33, G.36, L.37, L.39, V.40, L.43
- Chain X: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, G.109, T.112, F.113, L.116, H.117, F.120
- Ligands: PL9.105, CLA.120, BCR.167, LMG.172, STE.174, STE.188
- Chain b: G.13, L.14, G.17, A.18, V.20, L.21
16 PLIP interactions:10 interactions with chain X, 3 interactions with chain 0, 3 interactions with chain b,- Hydrophobic interactions: X:L.36, X:P.39, X:P.39, X:L.43, X:W.93, X:L.116, 0:A.32, 0:L.39, 0:V.40, b:L.14, b:A.18, b:V.20
- Hydrogen bonds: X:L.92
- Salt bridges: X:H.117
- pi-Stacking: X:F.113
- Metal complexes: X:H.117
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.4: 36 residues within 4Å:- Chain A: L.41, A.44, T.45, F.48, I.115, F.119, A.123, Y.126, Q.130, A.146, Y.147, A.149, P.150, F.158, M.172, P.173, L.174, G.175, I.176, T.179, V.205, P.279, V.280, V.283
- Chain D: L.205, A.208, L.209, A.212, I.213, W.253, F.257
- Ligands: CLA.2, CLA.10, SQD.13, PL9.71, LHG.73
15 PLIP interactions:2 interactions with chain D, 13 interactions with chain A- Hydrophobic interactions: D:L.205, D:I.213, A:L.41, A:A.44, A:F.48, A:I.115, A:Y.126, A:A.146, A:Y.147, A:Y.147, A:P.150, A:V.283
- Hydrogen bonds: A:Y.126, A:Q.130, A:Y.147
PHO.66: 38 residues within 4Å:- Chain A: F.206, A.209, L.210, F.211, A.213, M.214, F.255, L.258, I.259
- Chain D: L.37, A.41, A.44, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, A.148, P.149, F.153, F.173, G.174, V.175, I.178, V.204, P.275, V.276, L.279
- Ligands: CLA.3, PL9.9, CLA.68, LHG.78
22 PLIP interactions:19 interactions with chain D, 3 interactions with chain A- Hydrophobic interactions: D:A.41, D:W.48, D:W.48, D:W.48, D:I.114, D:L.122, D:F.125, D:A.145, D:F.146, D:F.146, D:P.149, D:F.153, D:V.175, D:P.275, D:L.279, D:L.279, A:F.206, A:A.209, A:A.213
- Hydrogen bonds: D:Q.129, D:N.142
- pi-Stacking: D:F.146
PHO.162: 37 residues within 4Å:- Chain U: L.41, A.44, T.45, F.48, I.115, F.119, A.123, Y.126, Q.130, A.146, Y.147, A.149, P.150, F.158, M.172, P.173, L.174, G.175, I.176, T.179, V.205, P.279, V.280, V.283
- Chain X: L.205, A.208, L.209, A.212, I.213, W.253, I.256, F.257
- Ligands: CLA.98, SQD.107, CLA.165, PL9.168, LHG.170
18 PLIP interactions:15 interactions with chain U, 3 interactions with chain X- Hydrophobic interactions: U:L.41, U:A.44, U:F.48, U:F.48, U:I.115, U:F.119, U:A.146, U:Y.147, U:Y.147, U:V.205, U:P.279, U:V.283, X:L.205, X:A.208, X:A.212
- Hydrogen bonds: U:Y.126, U:Q.130, U:Y.147
PHO.163: 39 residues within 4Å:- Chain U: F.206, A.209, L.210, F.211, A.213, M.214, F.255, L.258, I.259
- Chain X: L.37, A.41, A.44, L.45, W.48, I.114, A.115, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, A.148, P.149, F.153, F.173, G.174, V.175, I.178, V.204, P.275, V.276, L.279
- Ligands: CLA.99, PL9.105, CLA.164, LHG.175
20 PLIP interactions:18 interactions with chain X, 2 interactions with chain U- Hydrophobic interactions: X:A.41, X:W.48, X:W.48, X:W.48, X:W.48, X:I.114, X:L.122, X:F.125, X:F.125, X:A.145, X:F.146, X:P.149, X:F.173, X:P.275, X:L.279, U:F.206, U:L.210
- Hydrogen bonds: X:Q.129, X:N.142
- pi-Stacking: X:F.146
- 22 x BCR: BETA-CAROTENE(Non-covalent)
BCR.6: 30 residues within 4Å:- Chain A: F.17, W.20, V.21, V.30, G.34, V.35, I.38, P.39, L.42, A.43, I.46, C.47, I.50, A.51, A.54, A.55, P.56, I.96, L.102, W.105, L.106, P.111, L.114
- Chain H: F.14, F.15, L.18
- Chain V: W.75
- Ligands: CLA.5, DGD.14, STE.84
Ligand excluded by PLIPBCR.33: 24 residues within 4Å:- Chain 8: F.18, F.19
- Chain B: A.21, A.22, M.25, L.29, F.108, A.111, C.112, W.115
- Chain L: L.6, I.9, A.10, L.13
- Ligands: CLA.23, CLA.27, CLA.29, CLA.30, BCR.34, SQD.39, STE.41, LHG.88, LMG.89, BCR.185
Ligand excluded by PLIPBCR.34: 24 residues within 4Å:- Chain B: L.29, V.30, G.32, W.33, S.36, I.101, V.102, S.104, G.105, L.106, F.108, L.109, F.458
- Ligands: CLA.20, CLA.23, CLA.27, CLA.29, BCR.33, SQD.39, LMG.89, DGD.108, STE.109, BCR.185, STE.186
Ligand excluded by PLIPBCR.35: 19 residues within 4Å:- Chain 8: F.18, F.22, F.23
- Chain B: W.91, L.103, L.106, L.107, L.109, A.110, C.112, W.113, V.116, Y.117
- Ligands: CLA.21, CLA.22, CLA.31, CLA.32, STE.36, SQD.107
Ligand excluded by PLIPBCR.57: 25 residues within 4Å:- Chain C: I.197, F.198, Y.200, L.201, I.212, V.215, D.220, V.221, G.224, H.225, W.227, I.228, I.231, A.251, F.252, M.269, F.277
- Chain H: F.19, V.20, F.23, L.24
- Ligands: CLA.44, CLA.48, CLA.49, CLA.50
Ligand excluded by PLIPBCR.58: 36 residues within 4Å:- Chain C: A.40, A.43, H.44, G.46, L.47, F.50, L.57, F.100, V.104, L.107, I.108, S.110, A.111, G.114, V.118, A.121, I.122
- Chain J: Y.15, F.18, L.21, V.22, L.25, F.32, L.35, A.36, W.39
- Chain T: L.9, L.12, V.13, S.16, V.20, W.47, V.54
- Ligands: CLA.54, BCR.86, BCR.96
Ligand excluded by PLIPBCR.70: 24 residues within 4Å:- Chain D: Y.42, L.43, G.46, G.47, L.49, T.50, F.101, W.104, L.110, F.113
- Chain F: T.25, L.26, P.29, T.30, F.33, L.34, I.37
- Chain I: V.21, V.25, F.28
- Ligands: PL9.9, DGD.60, CLA.69, LMG.72
Ligand excluded by PLIPBCR.81: 21 residues within 4Å:- Chain B: P.187, V.208
- Chain G: M.31, F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Chain R: T.2, I.3, L.7, F.11
- Ligands: CLA.17, CLA.18, CLA.19, CLA.25, CLA.26, STE.83
Ligand excluded by PLIPBCR.86: 20 residues within 4Å:- Chain C: F.97, F.100, V.101, V.104, V.105, I.108, S.109, V.112, L.113, F.135
- Chain J: Y.15
- Chain T: V.51, V.54, G.55, N.58, F.59
- Ligands: CLA.55, CLA.56, BCR.58, STE.64
Ligand excluded by PLIPBCR.92: 28 residues within 4Å:- Chain A: L.28
- Chain O: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain V: W.33, S.36, M.37, Y.40, F.108, L.109
- Ligands: SQD.13, DGD.14, LHG.73, SQD.87, STE.93, STE.94, CLA.119, CLA.126, BCR.129, BCR.130, STE.136
Ligand excluded by PLIPBCR.96: 30 residues within 4Å:- Chain C: F.50, L.107
- Chain I: A.14, T.15, G.18, M.19, I.22
- Chain J: L.21, L.25, I.28, L.31, F.32, A.34, L.35, F.37, V.38, A.41, F.45
- Chain S: I.28, G.29, A.31, G.32, P.33
- Chain T: V.13, S.16, F.17, V.20
- Ligands: SQD.12, CLA.54, BCR.58
Ligand excluded by PLIPBCR.101: 29 residues within 4Å:- Chain 1: F.14, F.15, L.18
- Chain B: W.75
- Chain U: F.17, W.20, V.30, G.34, V.35, I.38, P.39, L.42, A.43, I.46, C.47, I.50, A.51, A.54, A.55, P.56, I.96, L.102, W.105, L.106, P.111, L.114
- Ligands: CLA.100, DGD.108, STE.110
Ligand excluded by PLIPBCR.129: 24 residues within 4Å:- Chain 5: L.6, I.9, A.10, L.13
- Chain O: F.18, F.19
- Chain V: A.21, A.22, M.25, L.29, F.108, A.111, C.112, W.115
- Ligands: SQD.87, BCR.92, STE.94, CLA.119, CLA.123, CLA.125, CLA.126, BCR.130, LMG.132, LHG.182
Ligand excluded by PLIPBCR.130: 24 residues within 4Å:- Chain V: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105, L.106, F.108, L.109, F.458
- Ligands: DGD.14, SQD.87, BCR.92, STE.93, CLA.116, CLA.119, CLA.123, CLA.125, BCR.129, LMG.132, STE.136, LHG.182
Ligand excluded by PLIPBCR.131: 19 residues within 4Å:- Chain O: F.18, F.22, F.23
- Chain V: W.91, L.103, L.106, L.107, L.109, A.110, C.112, W.113, V.116, Y.117
- Ligands: SQD.13, CLA.117, CLA.118, CLA.127, CLA.128, STE.133
Ligand excluded by PLIPBCR.151: 22 residues within 4Å:- Chain 3: Y.15
- Chain W: F.97, F.100, V.101, V.104, V.105, I.108, S.109, V.112, L.113, F.134, F.135
- Ligands: CLA.149, CLA.150, BCR.153, STE.158
- Chain d: V.51, L.52, V.54, G.55, N.58, F.59
Ligand excluded by PLIPBCR.152: 25 residues within 4Å:- Chain 1: F.19, V.20, F.23, L.24
- Chain W: I.197, F.198, Y.200, L.201, I.212, V.215, D.220, V.221, G.224, H.225, W.227, I.228, I.231, A.251, F.252, M.269, F.277
- Ligands: CLA.138, CLA.142, CLA.143, CLA.144
Ligand excluded by PLIPBCR.153: 36 residues within 4Å:- Chain 3: Y.15, F.18, L.21, V.22, L.25, F.32, L.35, A.36, W.39
- Chain W: A.40, A.43, H.44, G.46, L.47, F.50, L.57, F.100, V.104, L.107, I.108, S.110, A.111, G.114, V.118, A.121, I.122
- Ligands: CLA.148, BCR.151, BCR.181
- Chain d: L.9, L.12, V.13, S.16, V.20, W.47, V.54
Ligand excluded by PLIPBCR.167: 24 residues within 4Å:- Chain 2: V.21, V.25, F.28
- Chain X: Y.42, L.43, L.45, G.46, G.47, L.49, T.50, F.101, W.104, L.110, F.113
- Chain Z: T.25, L.26, P.29, T.30, F.33, L.34, I.37
- Ligands: DGD.155, CLA.166, LMG.173
Ligand excluded by PLIPBCR.178: 20 residues within 4Å:- Chain 0: M.31, F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Chain V: P.187, V.208
- Ligands: CLA.113, CLA.114, CLA.115, CLA.121, CLA.122
- Chain b: T.2, I.3, L.7, F.11
Ligand excluded by PLIPBCR.181: 32 residues within 4Å:- Chain 2: W.11, A.14, T.15, G.18, M.19, I.22
- Chain 3: L.21, L.25, I.28, L.31, F.32, A.34, L.35, F.37, V.38, A.41, F.45
- Chain W: F.50, L.107
- Ligands: SQD.106, CLA.148, BCR.153, STE.161
- Chain c: I.28, G.29, A.31, G.32, P.33
- Chain d: V.13, S.16, F.17, V.20
Ligand excluded by PLIPBCR.185: 26 residues within 4Å:- Chain 8: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain B: W.33, S.36, M.37, Y.40, F.108, L.109
- Chain U: L.28
- Ligands: CLA.23, CLA.30, BCR.33, BCR.34, SQD.39, STE.41, SQD.107, LHG.170, STE.186
Ligand excluded by PLIP- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.7: 6 residues within 4Å:- Chain A: N.181, V.185, H.332, E.333
- Chain D: K.317, L.321
Ligand excluded by PLIPCL.8: 5 residues within 4Å:- Chain A: H.337, N.338, F.339
- Chain C: G.341, E.342
Ligand excluded by PLIPCL.102: 6 residues within 4Å:- Chain U: N.181, V.185, H.332, E.333
- Chain X: K.317, L.321
Ligand excluded by PLIPCL.103: 5 residues within 4Å:- Chain U: H.337, N.338, F.339
- Chain W: G.341, E.342
Ligand excluded by PLIP- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.9: 36 residues within 4Å:- Chain A: L.210, F.211, M.214, H.215, L.218, V.219, Y.246, I.248, A.251, H.252, F.255, I.259, A.263, S.264, F.265, N.266, L.271, F.274, L.275
- Chain D: F.38, P.39, A.41, Y.42, L.43, L.45
- Chain F: V.21, A.22, T.25, L.26
- Ligands: CLA.3, PHO.66, CLA.68, CLA.69, BCR.70, LHG.78, SQD.80
19 PLIP interactions:5 interactions with chain D, 12 interactions with chain A, 2 interactions with chain F- Hydrophobic interactions: D:F.38, D:A.41, D:Y.42, D:Y.42, D:L.45, A:F.211, A:F.211, A:M.214, A:L.218, A:F.255, A:F.255, A:I.259, A:L.271, A:L.271, F:A.22, F:T.25
- Hydrogen bonds: A:H.215, A:S.264, A:F.265
PL9.71: 48 residues within 4Å:- Chain A: F.48, V.49, F.52, I.53, L.71, I.77, I.176
- Chain D: M.198, M.199, A.202, G.203, G.206, L.209, L.210, I.213, H.214, T.217, V.218, Y.244, M.246, A.249, N.250, W.253, F.257, I.259, A.260, F.261, S.262, L.267, F.270, F.273, V.274, T.277, G.278, M.281
- Chain K: L.23, V.26, L.27, L.29, L.30
- Chain O: Y.6, V.7, F.10
- Ligands: PHO.4, CLA.10, CLA.23, LHG.73, LHG.88
23 PLIP interactions:4 interactions with chain A, 14 interactions with chain D, 2 interactions with chain K, 3 interactions with chain O- Hydrophobic interactions: A:V.49, A:F.52, A:F.52, A:F.52, D:M.199, D:L.209, D:T.217, D:A.249, D:W.253, D:F.261, D:F.261, D:F.261, D:L.267, D:F.270, D:F.273, D:V.274, K:L.23, K:L.29, O:F.10, O:F.10, O:F.10
- Hydrogen bonds: D:H.214, D:F.261
PL9.105: 41 residues within 4Å:- Chain U: F.211, M.214, H.215, L.218, V.219, Y.246, I.248, A.251, H.252, F.255, I.259, A.263, S.264, F.265, N.266, L.271, F.274, L.275
- Chain X: W.21, V.30, G.34, I.35, F.38, P.39, A.41, Y.42, L.45, F.125
- Chain Z: V.18, V.21, A.22, T.25, L.26
- Ligands: CLA.99, PHO.163, CLA.164, CLA.166, LHG.175, SQD.177
- Chain b: T.24, L.28
16 PLIP interactions:9 interactions with chain U, 2 interactions with chain Z, 4 interactions with chain X, 1 interactions with chain b- Hydrophobic interactions: U:L.218, U:F.255, U:I.259, U:L.271, U:F.274, U:L.275, Z:V.21, Z:A.22, X:V.30, X:F.38, X:A.41, X:L.45, b:T.24
- Hydrogen bonds: U:H.215, U:S.264, U:F.265
PL9.168: 48 residues within 4Å:- Chain 4: L.23, V.26, L.27, L.29, L.30
- Chain 8: Y.6, V.7, F.10
- Chain U: F.48, V.49, F.52, I.53, L.71, I.77, I.78, I.176
- Chain X: M.198, M.199, A.202, G.203, G.206, L.209, L.210, I.213, H.214, T.217, V.218, Y.244, M.246, A.249, N.250, W.253, F.257, I.259, A.260, F.261, L.267, F.270, F.273, V.274, T.277, G.278, M.281
- Ligands: CLA.119, PHO.162, CLA.165, LHG.170, LHG.182
20 PLIP interactions:4 interactions with chain U, 13 interactions with chain X, 2 interactions with chain 4, 1 interactions with chain 8- Hydrophobic interactions: U:F.52, U:I.53, U:I.77, U:I.77, X:M.199, X:A.202, X:L.209, X:T.217, X:W.253, X:F.261, X:L.267, X:F.270, X:F.273, X:V.274, 4:L.23, 4:L.30, 8:F.10
- Hydrogen bonds: X:H.214, X:F.261
- pi-Stacking: X:F.261
- 13 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.11: 28 residues within 4Å:- Chain A: F.93, P.95, W.97, E.98, F.117, L.120, L.121, S.124, F.155, L.159
- Chain C: L.201, L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269, F.272, I.273, L.426
- Chain H: K.5, Y.9
- Ligands: CLA.5, CLA.48, CLA.49, DGD.59
9 PLIP interactions:3 interactions with chain A, 2 interactions with chain H, 4 interactions with chain C- Hydrophobic interactions: A:F.155, C:P.205, C:F.206, C:W.211, C:W.211
- Hydrogen bonds: A:W.97, A:E.98, H:K.5, H:Y.9
LMG.37: 18 residues within 4Å:- Chain B: A.228, L.229, R.230, L.474
- Chain D: W.32, S.33, I.35, L.36, L.127, F.130, E.131
- Chain G: M.35
- Chain R: L.21, F.25
- Ligands: CLA.24, CLA.25, CLA.69, LMG.75
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain D- Water bridges: B:R.230, D:E.131
- Salt bridges: B:R.230
- Hydrophobic interactions: D:W.32
LMG.62: 20 residues within 4Å:- Chain C: F.58, H.62, Q.72, G.73, S.417, L.421
- Chain I: I.22
- Chain J: D.23, V.24, V.27, V.30, L.31
- Chain S: Q.21, I.25
- Ligands: CLA.45, CLA.47, CLA.51, CLA.53, DGD.60, STE.85
6 PLIP interactions:3 interactions with chain C, 2 interactions with chain J, 1 interactions with chain S- Hydrogen bonds: C:H.62
- Salt bridges: C:H.62, C:H.62
- Hydrophobic interactions: J:V.27, J:L.31, S:I.25
LMG.72: 28 residues within 4Å:- Chain D: L.45, W.48, L.49, Y.67, L.68, G.70, C.71, N.72, F.73
- Chain F: V.23, L.26, A.27, T.30, I.37, M.40, Q.41
- Chain I: V.25, F.28, F.29, G.31, A.32, L.36, G.37
- Ligands: CLA.3, DGD.61, CLA.68, BCR.70, LHG.78
13 PLIP interactions:7 interactions with chain D, 3 interactions with chain I, 3 interactions with chain F- Hydrophobic interactions: D:F.73, D:F.73, D:F.73, I:F.28, F:L.26
- Hydrogen bonds: D:Y.67, D:G.70, D:F.73, I:G.31, F:Q.41, F:Q.41
- Water bridges: D:N.72, I:F.28
LMG.75: 19 residues within 4Å:- Chain B: R.224, L.225, A.228
- Chain D: F.15, D.16, D.19, K.23, W.32, L.135
- Chain G: W.25, T.28, M.31, A.32, M.35, G.36
- Chain R: F.25
- Ligands: CLA.25, LMG.37, CLA.69
10 PLIP interactions:2 interactions with chain G, 3 interactions with chain B, 5 interactions with chain D- Hydrophobic interactions: G:A.32, G:M.35, B:L.225, B:A.228, D:W.32, D:W.32
- Water bridges: B:K.498, D:D.19
- Hydrogen bonds: D:K.23
- Salt bridges: D:K.23
LMG.89: 29 residues within 4Å:- Chain B: Y.40, T.327, G.328, P.329, K.332, W.450, F.453, A.454, V.457, F.458, L.461
- Chain D: F.196, I.284
- Chain K: F.35
- Chain L: N.4, L.6, G.7, A.10, L.13, F.14, V.17
- Ligands: CLA.23, CLA.29, CLA.30, BCR.33, BCR.34, LHG.38, STE.41, LHG.88
12 PLIP interactions:6 interactions with chain B, 4 interactions with chain L, 1 interactions with chain D, 1 interactions with chain K- Hydrophobic interactions: B:T.327, B:F.453, B:A.454, B:F.458, L:L.13, L:F.14, L:V.17, D:I.284, K:F.35
- Hydrogen bonds: B:Y.40, B:T.327, L:N.4
LMG.132: 30 residues within 4Å:- Chain 4: F.35
- Chain 5: N.4, L.6, G.7, A.10, L.13, F.14, V.17
- Chain V: Y.40, F.325, T.327, G.328, P.329, K.332, W.450, F.453, A.454, V.457, F.458, L.461
- Chain X: F.196, I.284
- Ligands: STE.94, CLA.119, CLA.125, CLA.126, BCR.129, BCR.130, LHG.169, LHG.182
11 PLIP interactions:3 interactions with chain 5, 5 interactions with chain V, 2 interactions with chain 4, 1 interactions with chain X- Hydrophobic interactions: 5:L.13, 5:F.14, V:A.454, 4:F.35, 4:F.35, X:I.284
- Hydrogen bonds: 5:N.4, V:Y.40, V:T.327
- Water bridges: V:T.327, V:K.332
LMG.134: 18 residues within 4Å:- Chain V: F.144, L.148, F.151, A.155, F.156, T.159, L.161, P.180, V.181, A.182, P.183, W.185, I.203, I.207, I.210, I.211, L.214
- Ligands: STE.137
5 PLIP interactions:5 interactions with chain V- Hydrophobic interactions: V:F.151, V:F.151, V:L.161, V:L.214
- Hydrogen bonds: V:W.185
LMG.157: 13 residues within 4Å:- Chain 3: D.23, V.27, V.30
- Chain W: F.58, H.62, L.421
- Ligands: CLA.139, CLA.141, CLA.145, CLA.147, DGD.155, STE.180
- Chain c: Q.21
3 PLIP interactions:3 interactions with chain W- Hydrophobic interactions: W:L.421
- Hydrogen bonds: W:H.62
- Salt bridges: W:H.62
LMG.159: 14 residues within 4Å:- Chain W: I.154, I.158, L.161, V.164, M.168, F.169, T.188, N.189, P.190, L.192, I.226, L.230, I.233
- Ligands: CLA.149
2 PLIP interactions:2 interactions with chain W- Hydrophobic interactions: W:L.230, W:I.233
LMG.160: 28 residues within 4Å:- Chain 1: K.5, Y.9
- Chain U: F.93, P.95, W.97, E.98, F.117, L.120, L.121, S.124, F.155, L.159
- Chain W: L.201, L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269, F.272, I.273, L.426
- Ligands: CLA.100, CLA.142, CLA.143, DGD.154
12 PLIP interactions:3 interactions with chain U, 7 interactions with chain W, 2 interactions with chain 1- Hydrophobic interactions: U:F.155, W:F.206, W:F.206, W:W.211, W:W.211, W:F.272
- Hydrogen bonds: U:W.97, U:E.98, W:E.209, 1:K.5, 1:Y.9
- Water bridges: W:S.204
LMG.172: 17 residues within 4Å:- Chain 0: W.25, T.28, M.31, A.32, M.35, G.36
- Chain V: R.224, L.225, A.228
- Chain X: F.15, D.19, K.23, W.32
- Ligands: CLA.121, STE.135, CLA.166, STE.174
10 PLIP interactions:2 interactions with chain V, 7 interactions with chain X, 1 interactions with chain 0- Hydrophobic interactions: V:L.225, V:A.228, X:W.32, X:W.32, X:W.32, 0:A.32
- Hydrogen bonds: X:D.19
- Water bridges: X:K.23, X:K.23
- Salt bridges: X:K.23
LMG.173: 27 residues within 4Å:- Chain 2: V.25, F.28, F.29, G.31, A.32, L.36, G.37
- Chain X: L.45, W.48, L.49, Y.67, L.68, G.70, C.71, N.72, F.73
- Chain Z: L.26, A.27, T.30, I.37, M.40, Q.41
- Ligands: CLA.99, DGD.155, DGD.156, CLA.164, BCR.167
14 PLIP interactions:4 interactions with chain Z, 6 interactions with chain X, 4 interactions with chain 2- Hydrophobic interactions: Z:L.26, Z:A.27, X:F.73, X:F.73, X:F.73, 2:F.28
- Hydrogen bonds: Z:Q.41, Z:Q.41, X:Y.67, X:G.70, X:F.73, 2:G.31
- Water bridges: 2:F.28, 2:L.36
- 8 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.12: 27 residues within 4Å:- Chain A: L.200, A.203, G.204, F.265, N.267, S.270, F.273, F.274, A.277, W.278, V.281, G.282, F.285
- Chain C: A.22, W.23, W.24
- Chain D: S.230, F.232, R.233
- Chain I: I.22
- Chain J: L.33, A.34, F.37
- Ligands: CLA.51, LHG.74, LHG.78, BCR.96
14 PLIP interactions:2 interactions with chain D, 1 interactions with chain I, 7 interactions with chain A, 2 interactions with chain J, 2 interactions with chain C- Hydrogen bonds: D:S.230, A:N.267, A:S.270, C:W.24
- Salt bridges: D:R.233
- Hydrophobic interactions: I:I.22, A:F.273, A:F.273, A:F.274, A:W.278, A:V.281, J:F.37, J:F.37, C:W.23
SQD.13: 23 residues within 4Å:- Chain A: W.20, N.26, R.27, L.28, V.30, M.37, I.38, L.41, L.42, T.45
- Chain O: I.14, F.17, F.22
- Chain V: L.106, L.109
- Ligands: PHO.4, CLA.10, DGD.14, LHG.73, BCR.92, CLA.118, CLA.128, BCR.131
7 PLIP interactions:6 interactions with chain A, 1 interactions with chain V- Hydrophobic interactions: A:L.28, A:I.38, A:L.42, A:T.45, V:L.106
- Hydrogen bonds: A:R.27, A:L.28
SQD.39: 27 residues within 4Å:- Chain 4: R.14, L.17, Y.18, L.21, L.25
- Chain 5: Y.26
- Chain 8: F.8, C.12, A.15, L.16, F.19, F.23
- Chain B: R.18, M.25, A.28, L.29, S.104, G.105, F.108, W.115
- Chain K: N.4, R.7
- Ligands: CLA.30, BCR.33, BCR.34, STE.184, BCR.185
11 PLIP interactions:2 interactions with chain 8, 4 interactions with chain 4, 3 interactions with chain B, 2 interactions with chain K- Hydrophobic interactions: 8:A.15, 8:F.19, 4:Y.18, B:F.108
- Hydrogen bonds: 4:R.14, 4:R.14, B:W.115
- Salt bridges: 4:R.14, B:R.18, K:R.7
- Water bridges: K:R.7
SQD.80: 17 residues within 4Å:- Chain D: W.21, R.24, R.26
- Chain F: P.14, F.16, T.17, V.18, V.21
- Chain R: V.20, L.23, T.24, V.27, L.28, I.31, D.35
- Ligands: PL9.9, CLA.69
9 PLIP interactions:2 interactions with chain D, 2 interactions with chain F, 5 interactions with chain R- Hydrogen bonds: D:R.24, F:V.18, R:D.35
- Salt bridges: D:R.26
- Water bridges: F:R.19, R:D.35, R:D.35
- Hydrophobic interactions: R:L.23, R:V.27
SQD.87: 26 residues within 4Å:- Chain 4: N.4
- Chain K: R.14, L.17, Y.18, L.21
- Chain L: Y.26
- Chain O: C.12, A.15, L.16, F.19, F.23, R.24, P.26
- Chain V: R.18, M.25, A.28, L.29, G.32, S.104, F.108, W.115
- Ligands: STE.91, BCR.92, CLA.126, BCR.129, BCR.130
11 PLIP interactions:2 interactions with chain O, 5 interactions with chain V, 4 interactions with chain K- Hydrophobic interactions: O:A.15, O:F.19, V:L.29, V:F.108, V:F.108, K:L.21
- Hydrogen bonds: V:W.115, K:R.14, K:R.14
- Salt bridges: V:R.18, K:R.14
SQD.106: 29 residues within 4Å:- Chain 2: I.22
- Chain 3: L.33, A.34, F.37
- Chain U: L.200, A.203, G.204, F.265, N.267, S.270, F.273, F.274, A.277, W.278, V.281, G.282, F.285
- Chain W: Q.16, A.22, W.23, W.24
- Chain X: S.230, F.232, R.233
- Ligands: CLA.145, DGD.156, STE.161, LHG.171, BCR.181
15 PLIP interactions:3 interactions with chain W, 2 interactions with chain X, 6 interactions with chain U, 1 interactions with chain 2, 3 interactions with chain 3- Hydrophobic interactions: W:W.23, U:L.200, U:A.203, U:A.277, U:W.278, U:W.278, 2:I.22, 3:A.34, 3:F.37, 3:F.37
- Hydrogen bonds: W:Q.16, W:W.24, X:S.230, U:N.267
- Salt bridges: X:R.233
SQD.107: 19 residues within 4Å:- Chain 8: F.22
- Chain B: L.106, L.109
- Chain U: W.20, N.26, R.27, L.28, V.30, I.38, L.41, L.42, T.45
- Ligands: CLA.22, CLA.32, BCR.35, PHO.162, CLA.165, LHG.170, BCR.185
3 PLIP interactions:2 interactions with chain U, 1 interactions with chain B- Hydrophobic interactions: U:L.28, U:L.42, B:L.106
SQD.177: 15 residues within 4Å:- Chain X: W.21, R.24, R.26
- Chain Y: E.7
- Chain Z: P.14, F.16, T.17, V.18, V.21
- Ligands: PL9.105
- Chain b: T.24, V.27, L.28, I.31, D.35
13 PLIP interactions:1 interactions with chain Y, 3 interactions with chain X, 4 interactions with chain Z, 5 interactions with chain b- Hydrogen bonds: Y:E.7, X:W.21, X:R.24, Z:V.18, b:D.35, b:D.35
- Salt bridges: X:R.26
- Hydrophobic interactions: Z:F.16, Z:V.21, b:V.27, b:V.27, b:I.31
- Water bridges: Z:R.19
- 10 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.14: 32 residues within 4Å:- Chain A: L.42, I.46, I.50, P.56, S.101, L.102, D.103, L.106
- Chain H: M.1, T.3, L.4, T.7, V.11
- Chain M: K.95, Q.135, G.139
- Chain V: W.75, S.76, F.90, E.94, L.98, V.102, L.106, L.109
- Ligands: CLA.5, BCR.6, SQD.13, STE.84, BCR.92, CLA.118, BCR.130, STE.136
13 PLIP interactions:3 interactions with chain M, 7 interactions with chain A, 2 interactions with chain H, 1 interactions with chain V- Hydrogen bonds: M:K.95, M:Q.135, A:D.103, A:D.103, A:D.103, A:D.103, A:D.103
- Water bridges: M:G.138, A:L.102
- Hydrophobic interactions: A:L.42, H:T.3, H:T.7, V:F.90
DGD.59: 39 residues within 4Å:- Chain A: L.91, M.127, S.148, L.151, A.152, F.155, L.159, I.160, I.163, F.168
- Chain C: W.177, P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, F.272, I.273, C.276, F.280, N.281, N.282, T.283, T.293, D.348, F.349, R.350, F.419, F.423, L.426
- Ligands: LMG.11, CLA.48, CLA.49
22 PLIP interactions:17 interactions with chain C, 5 interactions with chain A- Hydrophobic interactions: C:P.205, C:W.211, C:V.213, C:F.272, C:L.426, A:A.152, A:F.155, A:F.155, A:I.160, A:I.163
- Hydrogen bonds: C:G.208, C:N.282, C:N.282, C:N.282, C:T.283, C:T.283, C:D.348, C:D.348, C:R.350, C:R.350
- Water bridges: C:F.280, C:D.348
DGD.60: 28 residues within 4Å:- Chain A: H.195, F.197, T.292, L.297
- Chain C: Y.70, E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417, V.420
- Chain I: V.21, I.22, V.25, F.29, Y.33
- Ligands: CLA.47, CLA.51, DGD.61, LMG.62, BCR.70, STE.85
14 PLIP interactions:12 interactions with chain C, 1 interactions with chain I, 1 interactions with chain A- Hydrophobic interactions: C:W.413, I:V.25, A:F.197
- Hydrogen bonds: C:Q.72, C:Q.72, C:S.394, C:N.406, C:N.406, C:V.408, C:W.413
- Water bridges: C:G.73, C:S.394, C:S.394, C:V.408
DGD.61: 34 residues within 4Å:- Chain A: P.196, F.197, Q.199, L.200, A.203, F.285, F.300, N.301, F.302, S.305
- Chain C: L.392, N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain D: N.72, F.73, L.74
- Chain I: F.29, A.32, Y.33, G.37, S.38, S.39, L.40
- Chain Q: Q.60
- Ligands: CLA.3, CLA.47, CLA.51, DGD.60, LMG.72
22 PLIP interactions:2 interactions with chain D, 8 interactions with chain A, 7 interactions with chain C, 2 interactions with chain I, 3 interactions with chain Q- Hydrophobic interactions: D:L.74, D:L.74, A:P.196, A:Q.199, A:L.200, A:A.203, A:F.285, A:F.300, A:F.300
- Hydrogen bonds: A:S.305, C:N.393, C:N.403, C:N.403, C:N.403, C:S.404, C:N.406, I:A.32, I:G.37, Q:Q.60, Q:Q.60, Q:Q.60
- Water bridges: C:N.406
DGD.82: 43 residues within 4Å:- Chain B: Y.193, F.246, F.250, V.251, A.253, G.254, T.255, W.257, Y.258, T.271, Y.273, Q.274, S.277, Y.279, T.452, A.456, F.463
- Chain D: G.86, H.87, L.89, L.116, A.119, F.120, I.123, I.150, V.154, L.158, I.159, L.162, G.163, W.167, A.290, L.291
- Chain E: R.69
- Chain G: L.46, Y.49, N.50, V.60, S.61, W.62
- Ligands: CLA.18, CLA.24, CLA.25
22 PLIP interactions:5 interactions with chain B, 9 interactions with chain G, 7 interactions with chain D, 1 interactions with chain E- Hydrophobic interactions: B:Y.258, B:T.452, G:L.46, G:Y.49, G:Y.49, G:Y.49, D:F.120, D:I.123, D:L.162, D:A.290, D:L.291
- Hydrogen bonds: B:S.277, G:N.50, G:V.60, G:V.60, G:W.62, G:W.62, D:H.87, D:H.87
- Water bridges: B:T.271, B:T.271, E:R.69
DGD.108: 19 residues within 4Å:- Chain 1: M.1, L.4
- Chain 6: K.95
- Chain B: W.75, S.76, F.90, L.98, V.102
- Chain U: I.46, I.50, I.96, S.101, L.102, D.103, L.106
- Ligands: CLA.22, BCR.34, CLA.100, BCR.101
8 PLIP interactions:1 interactions with chain 1, 3 interactions with chain B, 3 interactions with chain U, 1 interactions with chain 6- Hydrophobic interactions: 1:L.4, B:W.75, B:W.75, B:L.98, U:I.50, U:L.102, U:L.102
- Salt bridges: 6:K.95
DGD.154: 36 residues within 4Å:- Chain U: L.91, M.127, S.148, L.151, A.152, F.155, L.159, I.160, I.163
- Chain W: W.177, P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, F.272, I.273, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, F.419, F.423, L.426
- Ligands: CLA.142, LMG.160
17 PLIP interactions:14 interactions with chain W, 3 interactions with chain U- Hydrophobic interactions: W:P.205, W:V.213, W:F.272, U:F.155, U:I.160, U:I.163
- Hydrogen bonds: W:G.208, W:E.209, W:F.280, W:N.282, W:N.282, W:T.283, W:T.283, W:D.348, W:D.348, W:R.350, W:R.350
DGD.155: 27 residues within 4Å:- Chain 2: F.29, Y.33
- Chain U: H.195, F.197, T.292, L.297
- Chain W: K.67, Y.70, E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417, V.420
- Ligands: CLA.141, CLA.145, DGD.156, LMG.157, BCR.167, LMG.173, STE.180
15 PLIP interactions:11 interactions with chain W, 1 interactions with chain U, 3 interactions with chain 2- Hydrophobic interactions: W:W.413, U:F.197, 2:F.29, 2:F.29
- Hydrogen bonds: W:E.71, W:S.394, W:N.406, W:N.406, W:N.406, W:V.408, W:W.413
- Water bridges: W:G.73, W:G.73, W:S.394, 2:Y.33
DGD.156: 35 residues within 4Å:- Chain 2: F.29, A.32, Y.33, G.37, S.38, S.39, L.40
- Chain U: P.196, F.197, Q.199, L.200, A.203, F.285, F.300, N.301, F.302, S.305
- Chain W: L.392, N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain X: N.72, F.73, L.74
- Ligands: CLA.99, SQD.106, CLA.141, CLA.145, DGD.155, LMG.173
- Chain a: Q.60
15 PLIP interactions:6 interactions with chain W, 2 interactions with chain 2, 5 interactions with chain U, 2 interactions with chain a- Hydrogen bonds: W:N.393, W:N.403, W:N.403, W:N.403, W:S.404, W:S.404, 2:A.32, 2:G.37, U:S.305, a:Q.60, a:Q.60
- Hydrophobic interactions: U:Q.199, U:L.200, U:A.203, U:F.300
DGD.179: 43 residues within 4Å:- Chain 0: L.46, Y.49, N.50, V.60, S.61, W.62
- Chain V: Y.193, F.250, V.251, A.253, G.254, T.255, W.257, Y.258, T.271, Y.273, Q.274, S.277, Y.279, T.452, A.456, F.463
- Chain X: G.86, H.87, L.89, L.116, A.119, F.120, I.123, I.150, V.154, L.158, I.159, L.162, G.163, S.165, W.167, V.287, A.290, L.291
- Ligands: CLA.114, CLA.120, CLA.121
12 PLIP interactions:8 interactions with chain 0, 4 interactions with chain X- Hydrophobic interactions: 0:L.46, 0:Y.49, 0:Y.49, 0:Y.49, X:L.162, X:L.291
- Hydrogen bonds: 0:N.50, 0:V.60, 0:W.62, 0:W.62, X:H.87, X:H.87
- 2 x OEY: CA-MN4-O6 CLUSTER(Covalent)
OEY.15: 13 residues within 4Å:- Chain A: D.61, S.169, D.170, V.185, E.189, H.332, E.333, H.337, D.342, A.344
- Chain C: E.342, R.345
- Ligands: OEX.16
22 PLIP interactions:12 interactions with chain A, 4 interactions with chain C, 6 Ligand-Water interactions- Hydrogen bonds: A:H.337, C:R.345, C:R.345
- Water bridges: A:S.169
- Metal complexes: A:D.170, A:D.170, A:E.189, A:H.332, A:E.333, A:E.333, A:E.333, A:D.342, A:D.342, A:A.344, C:E.342, C:E.342, H2O.1, H2O.2, H2O.2, H2O.2, H2O.4, H2O.4
OEY.111: 13 residues within 4Å:- Chain U: D.61, S.169, D.170, V.185, E.189, H.332, E.333, H.337, D.342, A.344
- Chain W: E.342, R.345
- Ligands: OEX.112
25 PLIP interactions:13 interactions with chain U, 5 interactions with chain W, 7 Ligand-Water interactions- Hydrogen bonds: U:H.337, W:R.345, W:R.345
- Water bridges: U:Y.161, U:S.169, U:S.169, U:H.190
- Metal complexes: U:D.170, U:E.189, U:E.189, U:H.332, U:E.333, U:E.333, U:D.342, U:D.342, W:E.342, W:E.342, W:E.342, H2O.40, H2O.40, H2O.41, H2O.41, H2O.41, H2O.42, H2O.43
- 2 x OEX: CA-MN4-O5 CLUSTER(Covalent)
OEX.16: 13 residues within 4Å:- Chain A: D.61, S.169, D.170, V.185, E.189, H.332, E.333, H.337, D.342, A.344
- Chain C: E.342, R.345
- Ligands: OEY.15
22 PLIP interactions:12 interactions with chain A, 4 interactions with chain C, 6 Ligand-Water interactions- Hydrogen bonds: A:H.337, C:R.345, C:R.345
- Water bridges: A:S.169
- Metal complexes: A:D.170, A:D.170, A:E.189, A:H.332, A:E.333, A:E.333, A:E.333, A:D.342, A:D.342, A:A.344, C:E.342, C:E.342, H2O.1, H2O.2, H2O.2, H2O.2, H2O.4, H2O.4
OEX.112: 13 residues within 4Å:- Chain U: D.61, S.169, D.170, V.185, E.189, H.332, E.333, H.337, D.342, A.344
- Chain W: E.342, R.345
- Ligands: OEY.111
24 PLIP interactions:13 interactions with chain U, 5 interactions with chain W, 6 Ligand-Water interactions- Hydrogen bonds: U:H.337, W:R.345, W:R.345
- Water bridges: U:S.169, U:S.169
- Metal complexes: U:D.170, U:D.170, U:E.189, U:E.189, U:H.332, U:E.333, U:E.333, U:E.333, U:D.342, U:D.342, W:E.342, W:E.342, W:E.342, H2O.40, H2O.40, H2O.41, H2O.41, H2O.42, H2O.43
- 31 x STE: STEARIC ACID(Non-covalent)(Non-functional Binders)
STE.36: 7 residues within 4Å:- Chain B: W.91, L.149
- Ligands: CLA.20, CLA.21, CLA.22, CLA.31, BCR.35
Ligand excluded by PLIPSTE.40: 5 residues within 4Å:- Chain B: P.183, E.184, W.185, G.186
- Ligands: CLA.17
Ligand excluded by PLIPSTE.41: 15 residues within 4Å:- Chain 5: L.8, T.11, A.12
- Chain 8: M.1, I.4, T.5, F.8, I.9
- Chain B: Y.40
- Chain L: L.6
- Ligands: CLA.23, CLA.30, BCR.33, LMG.89, BCR.185
Ligand excluded by PLIPSTE.42: 8 residues within 4Å:- Chain B: L.148, F.151, I.207, I.210, I.211, L.214, L.218
- Ligands: STE.43
Ligand excluded by PLIPSTE.43: 7 residues within 4Å:- Chain B: I.211, L.214, F.215, L.218, V.219
- Ligands: STE.42, STE.83
Ligand excluded by PLIPSTE.63: 3 residues within 4Å:- Chain C: L.192, I.226, L.230
Ligand excluded by PLIPSTE.64: 13 residues within 4Å:- Chain C: V.49, W.85, F.97, P.98, V.101, V.102, V.105, H.106, S.109
- Chain T: F.59
- Ligands: CLA.46, CLA.56, BCR.86
Ligand excluded by PLIPSTE.65: 5 residues within 4Å:- Chain C: L.192, D.193, P.194, R.195, W.227
Ligand excluded by PLIPSTE.76: 12 residues within 4Å:- Chain D: L.92, W.93, Q.98, G.99
- Chain R: I.12, G.13, S.16, G.17, V.20, L.21
- Ligands: CLA.24, CLA.69
Ligand excluded by PLIPSTE.79: 7 residues within 4Å:- Chain E: F.37, L.42, V.46
- Chain F: F.32
- Chain N: V.5, V.8, L.9
Ligand excluded by PLIPSTE.83: 10 residues within 4Å:- Chain B: V.208, I.211, F.215
- Chain G: L.30, F.34, L.37
- Ligands: CLA.17, CLA.25, STE.43, BCR.81
Ligand excluded by PLIPSTE.84: 8 residues within 4Å:- Chain A: I.96, L.102
- Chain H: M.1, L.4
- Ligands: CLA.5, BCR.6, DGD.14, CLA.118
Ligand excluded by PLIPSTE.85: 6 residues within 4Å:- Chain I: G.26, F.29, Y.30, Y.33
- Ligands: DGD.60, LMG.62
Ligand excluded by PLIPSTE.90: 13 residues within 4Å:- Chain 5: L.16, V.20, I.23, V.27
- Chain K: V.10
- Chain L: V.17, V.20, F.21, I.24, L.25, Q.28
- Ligands: CLA.30, STE.184
Ligand excluded by PLIPSTE.91: 6 residues within 4Å:- Chain L: I.23, Y.26, V.27
- Ligands: SQD.87, CLA.126, STE.183
Ligand excluded by PLIPSTE.93: 15 residues within 4Å:- Chain A: L.72
- Chain O: M.1, T.3, I.4, V.7, F.8
- Chain V: S.36, L.39, Y.40, A.43, T.44
- Ligands: BCR.92, STE.94, BCR.130, STE.136
Ligand excluded by PLIPSTE.94: 17 residues within 4Å:- Chain 5: L.6
- Chain L: L.8, T.11, A.12, V.15
- Chain O: M.1, I.4, T.5, F.8, I.9
- Chain V: Y.40
- Ligands: BCR.92, STE.93, CLA.119, CLA.126, BCR.129, LMG.132
Ligand excluded by PLIPSTE.109: 13 residues within 4Å:- Chain 8: V.7, F.10, A.11, I.14
- Chain B: L.39, I.101
- Chain U: V.49, I.50, I.53, A.54, L.72
- Ligands: BCR.34, STE.186
Ligand excluded by PLIPSTE.110: 4 residues within 4Å:- Chain U: R.16, F.17, W.20
- Ligands: BCR.101
Ligand excluded by PLIPSTE.133: 9 residues within 4Å:- Chain V: G.89, F.90, W.91, L.149, F.162
- Ligands: CLA.116, CLA.117, CLA.118, BCR.131
Ligand excluded by PLIPSTE.135: 12 residues within 4Å:- Chain 0: M.35
- Chain V: A.228, L.229, R.230, L.474
- Chain X: K.23, R.134, L.135
- Ligands: CLA.120, CLA.121, LMG.172, STE.174
Ligand excluded by PLIPSTE.136: 16 residues within 4Å:- Chain A: V.49, I.53, A.54, L.72
- Chain O: V.7, F.10, A.11, I.14
- Chain V: L.39, L.42, A.43, E.94
- Ligands: DGD.14, BCR.92, STE.93, BCR.130
Ligand excluded by PLIPSTE.137: 6 residues within 4Å:- Chain V: I.211, L.214, F.215, L.218, V.219
- Ligands: LMG.134
Ligand excluded by PLIPSTE.158: 14 residues within 4Å:- Chain W: V.49, W.85, F.97, P.98, V.101, V.102, V.105, H.106, S.109, L.113
- Ligands: CLA.139, CLA.140, CLA.150, BCR.151
Ligand excluded by PLIPSTE.161: 5 residues within 4Å:- Chain 3: F.37, F.45
- Chain W: W.23
- Ligands: SQD.106, BCR.181
Ligand excluded by PLIPSTE.174: 15 residues within 4Å:- Chain V: L.474
- Chain X: W.32, S.33, I.35, L.36, L.127, F.130, E.131, R.134
- Ligands: CLA.120, STE.135, CLA.166, LMG.172
- Chain b: L.21, F.25
Ligand excluded by PLIPSTE.180: 8 residues within 4Å:- Chain 2: I.22, V.25, G.26, F.29, Y.30, Y.33
- Ligands: DGD.155, LMG.157
Ligand excluded by PLIPSTE.183: 18 residues within 4Å:- Chain 4: R.7, P.9, V.10
- Chain 5: V.17, V.20, F.21, I.24, L.25, Q.28, Q.32
- Chain L: L.16, V.20, I.23, V.27, E.30, S.31
- Ligands: STE.91, CLA.126
Ligand excluded by PLIPSTE.184: 6 residues within 4Å:- Chain 5: I.23, Y.26, V.27
- Ligands: CLA.30, SQD.39, STE.90
Ligand excluded by PLIPSTE.186: 14 residues within 4Å:- Chain 8: M.1, T.3, I.4, V.7, F.8
- Chain B: S.36, L.39, Y.40, A.43, T.44
- Chain U: L.72
- Ligands: BCR.34, STE.109, BCR.185
Ligand excluded by PLIPSTE.188: 13 residues within 4Å:- Chain X: L.92, W.93, Q.98, G.99
- Ligands: CLA.166
- Chain b: P.5, K.8, G.9, I.12, S.16, G.17, V.20, L.21
Ligand excluded by PLIP- 10 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.38: 32 residues within 4Å:- Chain A: S.232, A.233, N.234
- Chain B: W.5, Y.6, R.7, L.461, F.464, W.468, F.479
- Chain D: R.139, Y.141, I.144, W.266, F.269, L.272, F.273, V.276, T.277, W.280, M.281
- Chain K: L.23, I.24, L.27
- Chain L: F.14, V.17, P.18
- Ligands: CLA.23, CLA.27, CLA.29, LHG.88, LMG.89
17 PLIP interactions:7 interactions with chain B, 2 interactions with chain L, 4 interactions with chain A, 4 interactions with chain D- Hydrophobic interactions: B:W.5, B:L.461, B:F.464, L:F.14, L:P.18, D:F.273
- Hydrogen bonds: B:Y.6, B:Y.6, A:S.232, A:A.233, A:N.234, A:N.234, D:Y.141
- Water bridges: B:R.7, D:R.139, D:R.139
- Salt bridges: B:R.7
LHG.73: 36 residues within 4Å:- Chain A: L.28, M.37, Y.126, R.129, N.234
- Chain D: I.256, F.257, G.258, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Chain K: N.13, T.15, S.16, Y.18, L.19, L.22, V.26, L.29
- Chain O: F.10, I.13, L.16, F.17, A.20, I.21
- Ligands: CLA.2, PHO.4, CLA.10, SQD.13, PL9.71, LHG.88, BCR.92
21 PLIP interactions:8 interactions with chain D, 6 interactions with chain O, 7 interactions with chain K- Hydrophobic interactions: D:F.257, D:I.259, D:F.261, O:I.13, O:F.17, O:F.17, O:I.21, K:Y.18, K:L.19, K:L.22, K:V.26
- Hydrogen bonds: D:S.262, D:S.262, D:S.262, D:N.263, D:W.266, K:N.13, K:N.13, K:T.15
- Water bridges: O:E.25, O:E.25
LHG.74: 28 residues within 4Å:- Chain A: R.140, W.142, V.145, A.146, F.273, A.276, A.277, V.280, V.281, W.284, F.285
- Chain C: F.21, W.24, A.25, F.424, W.431, R.435
- Chain D: A.216, E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.12, CLA.47, CLA.51, CLA.53
14 PLIP interactions:5 interactions with chain C, 4 interactions with chain A, 5 interactions with chain D- Hydrophobic interactions: C:W.24, C:W.24, C:W.431, A:W.142, A:A.146, A:F.273
- Hydrogen bonds: C:R.435, C:R.435, D:N.220, D:A.229, D:A.229, D:T.231, D:T.231
- Salt bridges: A:R.140
LHG.78: 25 residues within 4Å:- Chain A: L.258, I.259, F.260, Y.262, A.263, S.264, F.265, F.274
- Chain D: F.27, V.28, L.37, F.38, F.125, R.128
- Chain E: P.9, F.10, S.11
- Chain F: A.22, V.23, L.26
- Ligands: CLA.3, PL9.9, SQD.12, PHO.66, LMG.72
12 PLIP interactions:3 interactions with chain D, 4 interactions with chain A, 5 interactions with chain E- Hydrophobic interactions: D:V.28, D:F.38, D:F.125, A:Y.262, A:F.265, A:F.265, E:F.10
- Hydrogen bonds: A:Y.262, E:F.10, E:S.11, E:S.11, E:S.11
LHG.88: 33 residues within 4Å:- Chain A: S.232, N.234, Y.235
- Chain B: P.4, W.5, Y.6
- Chain D: A.202, W.266, F.269, F.270, F.273
- Chain K: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23, I.24, V.26
- Chain L: V.17, P.18, F.21, L.22
- Ligands: CLA.10, CLA.27, CLA.30, BCR.33, LHG.38, PL9.71, LHG.73, LMG.89
17 PLIP interactions:5 interactions with chain K, 2 interactions with chain L, 4 interactions with chain D, 3 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: K:L.23, L:P.18, L:F.21, D:W.266, D:F.270, D:F.273, D:F.273
- Hydrogen bonds: K:E.11, K:E.11, K:E.11, K:N.13, B:W.5, B:W.5, B:Y.6, A:S.232, A:S.232, A:N.234
LHG.169: 31 residues within 4Å:- Chain 4: L.23, I.24, L.27
- Chain 5: F.14, P.18
- Chain U: S.232, A.233, N.234
- Chain V: W.5, Y.6, R.7, L.461, F.464, W.468, F.479
- Chain X: R.139, Y.141, I.144, W.266, F.269, L.272, F.273, V.276, T.277, W.280, M.281
- Ligands: CLA.119, CLA.123, CLA.125, LMG.132, LHG.182
15 PLIP interactions:6 interactions with chain X, 1 interactions with chain 5, 5 interactions with chain V, 3 interactions with chain U- Hydrophobic interactions: X:F.273, X:F.273, X:V.276, X:W.280, 5:P.18, V:W.5, V:L.461, V:F.464
- Hydrogen bonds: X:R.139, X:Y.141, U:A.233, U:N.234
- Water bridges: V:R.7, U:N.234
- Salt bridges: V:R.7
LHG.170: 36 residues within 4Å:- Chain 4: N.13, T.15, S.16, Y.18, L.19, L.22, V.26, L.29
- Chain 8: F.10, I.13, L.16, F.17, A.20, I.21
- Chain U: L.28, M.37, Y.126, R.129, N.234
- Chain X: I.256, F.257, G.258, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Ligands: CLA.98, SQD.107, PHO.162, CLA.165, PL9.168, LHG.182, BCR.185
19 PLIP interactions:9 interactions with chain X, 6 interactions with chain 8, 4 interactions with chain 4- Hydrophobic interactions: X:I.259, X:F.261, X:F.270, X:F.270, 8:F.10, 8:F.17, 8:F.17, 8:A.20, 8:I.21, 4:Y.18, 4:L.22
- Hydrogen bonds: X:S.262, X:S.262, X:S.262, X:N.263, X:W.266, 4:N.13, 4:S.16
- Water bridges: 8:E.25
LHG.171: 28 residues within 4Å:- Chain U: R.140, W.142, V.145, A.146, F.273, A.276, A.277, V.280, V.281, W.284, F.285
- Chain W: F.21, W.24, A.25, F.424, W.431, R.435
- Chain X: A.216, E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.106, CLA.141, CLA.145, CLA.147
16 PLIP interactions:6 interactions with chain W, 5 interactions with chain U, 5 interactions with chain X- Hydrophobic interactions: W:W.24, W:W.24, W:F.424, W:W.431, U:A.276, U:V.280
- Hydrogen bonds: W:R.435, W:R.435, X:N.220, X:A.229, X:A.229, X:T.231, X:T.231
- Water bridges: U:R.140, U:R.140
- Salt bridges: U:R.140
LHG.175: 22 residues within 4Å:- Chain 2: L.10
- Chain U: L.258, I.259, F.260, Y.262, A.263, F.265
- Chain X: F.27, V.28, L.37, F.38, F.125, R.128
- Chain Y: P.9, F.10, S.11
- Chain Z: A.22, V.23, L.26
- Ligands: CLA.99, PL9.105, PHO.163
7 PLIP interactions:3 interactions with chain U, 3 interactions with chain Y, 1 interactions with chain X- Hydrophobic interactions: U:F.260, U:F.260, U:F.265, Y:F.10, X:L.37
- Hydrogen bonds: Y:F.10, Y:S.11
LHG.182: 34 residues within 4Å:- Chain 4: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23, I.24, V.26
- Chain 5: V.17, P.18, F.21, L.22
- Chain U: S.232, N.234, Y.235
- Chain V: P.4, W.5, Y.6
- Chain X: A.202, W.266, F.269, F.270, F.273
- Ligands: CLA.123, CLA.126, BCR.129, BCR.130, LMG.132, CLA.165, PL9.168, LHG.169, LHG.170
16 PLIP interactions:5 interactions with chain 4, 3 interactions with chain X, 4 interactions with chain V, 1 interactions with chain 5, 3 interactions with chain U- Hydrophobic interactions: 4:V.26, X:F.270, X:F.273, X:F.273, V:W.5, 5:F.21
- Hydrogen bonds: 4:E.11, 4:E.11, 4:E.11, 4:N.13, V:W.5, V:W.5, V:Y.6, U:S.232, U:S.232, U:Y.235
- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.67: 11 residues within 4Å:- Chain A: H.215, V.219, E.244, Y.246, H.272
- Chain D: H.214, V.218, Y.244, K.264, H.268
- Ligands: FE2.1
4 PLIP interactions:2 interactions with chain D, 2 interactions with chain A- Hydrogen bonds: D:Y.244, D:K.264, A:H.215, A:Y.246
BCT.104: 12 residues within 4Å:- Chain U: H.215, V.219, E.244, Y.246, S.268, H.272
- Chain X: H.214, V.218, Y.244, K.264, H.268
- Ligands: FE2.97
3 PLIP interactions:3 interactions with chain U- Hydrogen bonds: U:Y.246, U:Y.246
- Water bridges: U:S.268
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.77: 25 residues within 4Å:- Chain E: R.8, F.10, I.13, I.14, R.18, Y.19, I.22, H.23, T.26, I.27, L.30
- Chain F: I.15, F.16, R.19, W.20, V.23, H.24, A.27, V.28, I.31
- Chain N: V.12, A.15, A.16, A.19, I.23
23 PLIP interactions:9 interactions with chain E, 3 interactions with chain N, 11 interactions with chain F,- Hydrophobic interactions: E:I.13, E:T.26, E:I.27, N:A.15, N:A.19, N:I.23, F:I.15, F:W.20, F:V.23, F:A.27, F:V.28, F:I.31
- Water bridges: E:R.8, E:R.18, F:R.19
- Salt bridges: E:R.8, E:R.18, F:R.19
- pi-Stacking: E:Y.19, F:W.20, F:W.20, F:H.24
- Metal complexes: E:H.23
HEM.176: 26 residues within 4Å:- Chain 7: V.12, A.15, A.16, A.19, I.23
- Chain Y: R.8, F.10, I.13, I.14, S.16, R.18, Y.19, I.22, H.23, T.26, I.27, L.30
- Chain Z: I.15, F.16, R.19, W.20, V.23, H.24, A.27, V.28, I.31
21 PLIP interactions:11 interactions with chain Y, 2 interactions with chain 7, 8 interactions with chain Z,- Hydrophobic interactions: Y:F.10, Y:I.13, Y:T.26, Y:I.27, 7:A.19, 7:I.23, Z:I.15, Z:W.20, Z:A.27
- Hydrogen bonds: Y:S.16
- Water bridges: Y:R.8
- Salt bridges: Y:R.8, Y:R.18, Z:R.19
- pi-Stacking: Y:Y.19, Z:W.20, Z:W.20, Z:H.24
- pi-Cation interactions: Y:H.23
- Metal complexes: Y:H.23, Z:H.24
- 2 x HEC: HEME C(Covalent)
HEC.95: 31 residues within 4Å:- Chain C: A.381, E.382
- Chain Q: F.59, A.62, C.63, S.65, C.66, H.67, T.72, T.74, N.75, L.78, D.79, L.80, T.84, L.85, A.88, R.92, L.98, Y.101, M.102, T.107, Y.108, I.114, H.118, P.119, F.127, M.130, L.133, I.141, I.145
16 PLIP interactions:16 interactions with chain Q,- Hydrophobic interactions: Q:A.62, Q:T.72, Q:L.78, Q:L.80, Q:L.98, Q:Y.101, Q:Y.101, Q:I.114, Q:P.119, Q:I.141
- Hydrogen bonds: Q:D.79
- Water bridges: Q:N.75, Q:Y.108
- pi-Stacking: Q:Y.101
- Metal complexes: Q:H.67, Q:H.118
HEC.187: 29 residues within 4Å:- Chain W: A.381
- Chain a: F.59, A.62, C.63, S.65, C.66, H.67, T.72, T.74, N.75, L.78, D.79, L.80, T.84, L.85, A.88, R.92, L.98, Y.101, M.102, T.107, Y.108, I.114, H.118, P.119, F.127, M.130, I.141, I.145
17 PLIP interactions:17 interactions with chain a,- Hydrophobic interactions: a:A.62, a:T.72, a:L.80, a:L.85, a:L.98, a:Y.101, a:I.114, a:P.119, a:I.141, a:I.145
- Hydrogen bonds: a:D.79, a:Y.108
- Water bridges: a:N.75
- pi-Stacking: a:H.67, a:Y.101
- Metal complexes: a:H.67, a:H.118
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hussein, R. et al., Structural dynamics in the water and proton channels of photosystem II during the S 2 to S 3 transition. Nat Commun (2021)
- Release Date
- 2021-11-10
- Peptides
- Photosystem II protein D1 1: AU
Photosystem II CP47 reaction center protein: BV
Photosystem II CP43 reaction center protein: CW
Photosystem II D2 protein: DX
Cytochrome b559 subunit alpha: EY
Cytochrome b559 subunit beta: FZ
Photosystem II reaction center protein H: G0
Photosystem II reaction center protein I: H1
Photosystem II reaction center protein J: I2
Photosystem II reaction center protein K: J3
Photosystem II reaction center protein L: K4
Photosystem II reaction center protein M: L5
Photosystem II manganese-stabilizing polypeptide: M6
Photosystem II protein Y: N7
Photosystem II reaction center protein T: O8
Photosystem II 12 kDa extrinsic protein: P9
Cytochrome c-550: Qa
Photosystem II reaction center X protein: Rb
Photosystem II reaction center protein Ycf12: Sc
Photosystem II reaction center protein Z: Td - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AU
aB
BV
bC
CW
cD
DX
dE
EY
eF
FZ
fG
H0
hH
I1
iI
J2
jJ
K3
kK
L4
lL
M5
mM
O6
oN
R7
rO
T8
tP
U9
uQ
Va
vR
Xb
xS
Yc
yT
Zd
z - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 7rf8.1
RT XFEL structure of the two-flash state of Photosystem II (2F, S3-rich) at 2.09 Angstrom resolution
Photosystem II protein D1 1
Toggle Identical (AU)Photosystem II CP47 reaction center protein
Toggle Identical (BV)Photosystem II CP43 reaction center protein
Photosystem II D2 protein
Toggle Identical (DX)Cytochrome b559 subunit alpha
Toggle Identical (EY)Cytochrome b559 subunit beta
Toggle Identical (FZ)Photosystem II reaction center protein H
Photosystem II reaction center protein I
Toggle Identical (H1)Photosystem II reaction center protein J
Toggle Identical (I2)Photosystem II reaction center protein K
Toggle Identical (J3)Photosystem II reaction center protein L
Photosystem II reaction center protein M
Photosystem II manganese-stabilizing polypeptide
Toggle Identical (M6)Photosystem II protein Y
Toggle Identical (N7)Photosystem II reaction center protein T
Toggle Identical (O8)Photosystem II 12 kDa extrinsic protein
Toggle Identical (P9)Cytochrome c-550
Toggle Identical (Qa)Photosystem II reaction center X protein
Photosystem II reaction center protein Ycf12
Photosystem II reaction center protein Z
Toggle Identical (Td)Related Entries With Identical Sequence
1izl.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1 more...less...5e79.1 | 5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kaf.1 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1 | 9evx.1