- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.26 Å
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 2 x FE2: FE (II) ION(Non-covalent)
FE2.1: 6 residues within 4Å:- Chain A: H.215, V.219, H.272
- Chain D: H.214, H.268
- Ligands: BCT.65
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain D- Metal complexes: A:H.215, A:H.272, D:H.214, D:H.268
FE2.96: 6 residues within 4Å:- Chain U: H.215, V.219, H.272
- Chain X: H.214, H.268
- Ligands: BCT.104
4 PLIP interactions:2 interactions with chain X, 2 interactions with chain U- Metal complexes: X:H.214, X:H.268, U:H.215, U:H.272
- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.2: 36 residues within 4Å:- Chain A: F.119, A.123, Y.147, P.150, L.151, S.153, A.154, A.156, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, A.287, I.290
- Chain D: L.182, L.183, V.204, L.205, F.257
- Chain O: F.17
- Ligands: CLA.3, PHO.4, CLA.66, CLA.67, LHG.72
17 PLIP interactions:13 interactions with chain A, 3 interactions with chain D, 1 interactions with chain O,- Hydrophobic interactions: A:F.119, A:P.150, A:F.186, A:Q.187, A:I.192, A:I.192, A:L.193, A:F.206, A:F.206, A:I.290, D:L.182, D:L.182, D:L.205, O:F.17
- Hydrogen bonds: A:T.286
- Water bridges: A:I.290
- Metal complexes: A:H.198
CLA.3: 31 residues within 4Å:- Chain A: L.193, H.198, Q.199, V.202, A.203, F.206, G.207, L.210, F.211, F.260, W.278
- Chain D: F.73, L.74, V.152, F.153, V.156, F.157, F.173, V.175, I.178, F.179, F.181, L.182
- Chain F: L.26
- Ligands: CLA.2, PL9.9, DGD.59, PHO.64, CLA.66, LMG.71, LHG.76
11 PLIP interactions:6 interactions with chain A, 4 interactions with chain D, 1 Ligand-Water interactions- Hydrophobic interactions: A:V.202, A:F.206, A:L.210, A:W.278, D:I.178, D:F.181, D:L.182, D:L.182
- Water bridges: A:H.198
- pi-Stacking: A:F.206
- Metal complexes: H2O.5
CLA.5: 28 residues within 4Å:- Chain A: V.35, I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, Q.113, L.114, F.117, H.118, L.121
- Chain H: L.4, V.8, Y.9, V.11, V.12, T.13, F.15, V.16, L.17
- Ligands: BCR.6, LMG.10, DGD.14, CLA.47, STE.83
18 PLIP interactions:6 interactions with chain H, 12 interactions with chain A,- Hydrophobic interactions: H:V.11, H:V.12, H:T.13, H:F.15, H:F.15, H:V.16, A:P.39, A:T.40, A:F.93, A:P.95, A:I.96, A:W.97, A:W.97, A:F.117, A:L.121
- Hydrogen bonds: A:I.96
- Salt bridges: A:H.118
- Metal complexes: A:H.118
CLA.16: 14 residues within 4Å:- Chain B: W.185, G.186, P.187, F.190, A.204
- Chain G: F.41, I.44, I.45, I.48, L.55
- Ligands: CLA.17, STE.39, BCR.80, STE.82
9 PLIP interactions:4 interactions with chain G, 4 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: G:F.41, G:F.41, G:I.44, G:L.55, B:W.185, B:P.187, B:P.187, B:F.190
- Metal complexes: H2O.6
CLA.17: 35 residues within 4Å:- Chain B: E.184, W.185, G.189, F.190, P.192, G.197, V.198, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250, V.251, T.255
- Chain D: V.154, L.158, I.159, L.162
- Chain G: F.38, F.41, L.42, I.45, L.46, Y.49
- Ligands: CLA.16, CLA.18, CLA.20, CLA.23, CLA.24, BCR.80, DGD.81, STE.82
13 PLIP interactions:9 interactions with chain B, 3 interactions with chain G, 1 interactions with chain D,- Hydrophobic interactions: B:W.185, B:F.190, B:H.201, B:A.205, B:V.208, B:F.250, B:F.250, G:F.38, G:L.46, D:I.159
- pi-Stacking: B:F.190, G:F.41
- Metal complexes: B:H.201
CLA.18: 30 residues within 4Å:- Chain B: R.68, L.69, A.146, L.149, C.150, F.153, L.158, M.166, V.198, H.201, H.202, A.205, A.244, F.247, A.248, V.251, V.252, T.262
- Chain G: M.35, F.38, L.39, L.42
- Ligands: CLA.17, CLA.19, CLA.20, CLA.21, CLA.23, CLA.24, CLA.25, BCR.80
15 PLIP interactions:13 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: B:L.149, B:L.149, B:F.153, B:F.153, B:F.153, B:F.247, B:A.248, B:V.252, G:F.38, G:L.39
- Hydrogen bonds: B:R.68, B:R.68
- Salt bridges: B:R.68
- pi-Cation interactions: B:H.201
- Metal complexes: B:H.202
CLA.19: 30 residues within 4Å:- Chain B: W.33, F.61, V.62, F.65, R.68, L.145, L.148, L.149, V.245, F.246, A.248, A.249, V.252, M.256, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.18, CLA.20, CLA.21, CLA.22, CLA.25, CLA.26, CLA.27, CLA.28, CLA.30, BCR.33, STE.35
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:W.33, B:F.61, B:F.65, B:F.65, B:L.145, B:L.149, B:V.245, B:A.248, B:A.249, B:V.252, B:F.458, B:F.458, B:F.462
- Salt bridges: B:R.68
- Metal complexes: B:H.455
CLA.20: 35 residues within 4Å:- Chain B: T.27, V.30, A.31, W.33, A.34, A.38, V.62, F.65, M.66, R.68, L.69, V.71, V.96, H.100, L.103, L.107, L.143, A.146, G.147, C.150, A.205, G.206, V.208, G.209
- Ligands: CLA.17, CLA.18, CLA.19, CLA.21, CLA.24, CLA.25, CLA.27, CLA.28, CLA.30, BCR.34, STE.35
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:T.27, B:A.31, B:W.33, B:A.34, B:L.69, B:V.96, B:L.103, B:L.143
- Hydrogen bonds: B:M.66
- Water bridges: B:R.68
- Salt bridges: B:R.68
- Metal complexes: B:H.100
CLA.21: 28 residues within 4Å:- Chain B: M.66, L.69, G.70, V.71, F.90, W.91, V.96, L.98, A.99, H.100, V.102, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.18, CLA.19, CLA.20, BCR.34, STE.35, DGD.38, SQD.108
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:L.69, B:V.71, B:F.90, B:F.90, B:W.91, B:W.91, B:A.99, B:V.102, B:L.149, B:L.149, B:F.153, B:F.156, B:F.162, B:F.162
- Salt bridges: B:H.100
- Metal complexes: B:H.157
CLA.22: 40 residues within 4Å:- Chain B: W.33, M.37, Y.40, E.41, T.44, Q.58, G.59, M.60, F.61, L.324, F.325, T.327, G.328, P.329, P.447, W.450, F.451, F.453, A.454, H.455, F.458
- Chain D: F.196, M.199, F.273, T.277, M.281
- Chain K: L.23, L.27, F.31, F.35
- Chain L: F.14
- Ligands: CLA.19, CLA.28, BCR.32, BCR.33, LHG.36, STE.40, PL9.70, LMG.89, BCR.181
17 PLIP interactions:13 interactions with chain B, 3 interactions with chain K, 1 Ligand-Water interactions,- Hydrophobic interactions: B:Y.40, B:F.61, B:F.61, B:F.61, B:F.325, B:F.325, B:P.447, B:W.450, B:A.454, K:L.27, K:F.31, K:F.31
- Hydrogen bonds: B:Y.40, B:G.328
- Water bridges: B:W.450
- pi-Stacking: B:F.61
- Metal complexes: H2O.10
CLA.23: 36 residues within 4Å:- Chain B: L.229, R.230, T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, G.470, A.471, T.473, L.474
- Chain D: L.36, L.89, L.116, F.120, I.123, M.126, L.127, F.130, I.150
- Chain G: L.39, L.43, L.46, E.47
- Ligands: CLA.17, CLA.18, CLA.24, CLA.25, CLA.68, LMG.74, STE.75, DGD.81
17 PLIP interactions:6 interactions with chain D, 9 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: D:F.120, D:I.123, D:I.123, D:M.126, D:L.127, D:I.150, B:A.243, B:F.246, B:F.247, B:F.463, B:F.463, B:I.467, B:L.474, G:L.39, G:L.43
- Hydrogen bonds: B:S.239
- Metal complexes: B:H.466
CLA.24: 37 residues within 4Å:- Chain B: F.139, L.143, V.208, I.211, A.212, F.215, H.216, V.219, R.220, P.221, P.222, L.225, L.229, M.231, F.247
- Chain D: F.120, I.123
- Chain G: T.27, T.28, L.30, M.31, F.34, M.35, L.39, L.42, L.43, L.46
- Ligands: CLA.17, CLA.18, CLA.20, CLA.23, CLA.25, LMG.73, LMG.74, BCR.80, DGD.81, STE.82
14 PLIP interactions:4 interactions with chain G, 10 interactions with chain B,- Hydrophobic interactions: G:M.31, G:F.34, G:L.39, B:F.139, B:F.139, B:F.139, B:V.208, B:A.212, B:F.215, B:F.215, B:L.225
- Hydrogen bonds: G:T.27
- Salt bridges: B:H.216
- Metal complexes: B:H.216
CLA.25: 29 residues within 4Å:- Chain B: L.19, H.23, L.133, L.135, P.136, M.138, F.139, H.142, L.143, L.145, A.146, L.149, L.229, M.231, I.234, T.236, V.237, S.240, S.241, A.244, V.245
- Ligands: CLA.18, CLA.19, CLA.20, CLA.23, CLA.24, CLA.27, CLA.30, BCR.80
9 PLIP interactions:8 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:L.135, B:M.138, B:F.139, B:L.145, B:I.234, B:T.236, B:V.237
- Hydrogen bonds: B:H.142
- Metal complexes: H2O.9
CLA.26: 26 residues within 4Å:- Chain B: W.5, Y.6, R.7, V.8, H.9, T.10, I.13, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472, F.479
- Chain L: F.21
- Ligands: CLA.19, CLA.27, CLA.28, CLA.29, BCR.33, LHG.36, LHG.88
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:W.5, B:L.238, B:L.238, B:I.242, B:F.462, B:F.464
- Hydrogen bonds: B:H.9, B:W.468
- Salt bridges: B:H.9, B:R.472
- pi-Stacking: B:W.468
- Metal complexes: B:H.469
CLA.27: 25 residues within 4Å:- Chain B: H.9, T.10, L.12, I.13, L.19, A.22, H.23, H.26, T.27, V.30, I.234, E.235, V.237, L.238, S.241, I.242, V.245, A.248
- Ligands: CLA.19, CLA.20, CLA.25, CLA.26, CLA.28, CLA.29, CLA.30
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:L.12, B:L.19, B:H.23, B:H.26, B:I.234, B:V.237, B:L.238
- Hydrogen bonds: B:S.241
- Salt bridges: B:H.23
- Metal complexes: B:H.23
CLA.28: 20 residues within 4Å:- Chain B: H.9, H.26, L.29, V.30, W.33, V.245, F.458, L.461, F.462
- Chain L: F.14
- Ligands: CLA.19, CLA.20, CLA.22, CLA.26, CLA.27, CLA.29, BCR.32, BCR.33, LHG.36, LMG.89
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:V.30, B:V.30, B:W.33, B:W.33, B:L.461, B:F.462
- Salt bridges: B:H.9
- Metal complexes: B:H.26
CLA.29: 29 residues within 4Å:- Chain 5: L.16
- Chain 8: F.8
- Chain B: L.3, V.8, H.9, V.11, L.12, A.22, M.25, H.26, L.29, W.115
- Chain K: Q.8, V.10
- Chain L: L.13, V.17, F.21, L.25
- Ligands: CLA.26, CLA.27, CLA.28, BCR.32, SQD.37, STE.40, LHG.88, LMG.89, STE.90, STE.180, BCR.181
10 PLIP interactions:6 interactions with chain B, 3 interactions with chain L, 1 interactions with chain 8,- Hydrophobic interactions: B:V.8, B:V.8, B:L.12, B:L.29, B:W.115, L:L.13, L:F.21, L:L.25, 8:F.8
- Metal complexes: B:H.9
CLA.30: 26 residues within 4Å:- Chain B: P.16, L.19, I.20, H.23, L.24, T.27, L.103, L.107, L.122, F.123, L.133, M.138, I.141, H.142, L.145
- Chain G: L.7, L.11, L.14, N.15
- Ligands: CLA.19, CLA.20, CLA.25, CLA.27, CLA.31, BCR.34, STE.35
10 PLIP interactions:6 interactions with chain B, 4 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.133, B:I.141, B:L.145, G:L.7, G:L.11, G:L.11, G:L.14
- Hydrogen bonds: B:H.23
- Metal complexes: B:H.142
CLA.31: 17 residues within 4Å:- Chain B: I.20, L.24, L.107, A.110, W.113, H.114, L.120, L.122, F.123
- Chain G: T.5, W.6, L.7, G.8, L.11
- Ligands: CLA.30, BCR.34, SQD.108
13 PLIP interactions:9 interactions with chain B, 4 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.24, B:A.110, B:W.113, B:W.113, B:L.120, B:L.122, G:L.7, G:L.11
- pi-Stacking: B:W.113
- Metal complexes: B:H.114
- Hydrogen bonds: G:T.5
- Water bridges: G:W.6
CLA.43: 31 residues within 4Å:- Chain C: T.82, L.83, L.156, G.159, A.160, L.163, L.173, L.201, W.211, I.212, V.215, L.218, V.221, H.225, I.228, C.232, A.266, M.269, M.270, I.273, A.274, F.277, V.284, Y.285
- Ligands: CLA.44, CLA.45, CLA.47, CLA.48, CLA.49, CLA.54, BCR.56
8 PLIP interactions:8 interactions with chain C,- Hydrophobic interactions: C:L.156, C:A.160, C:L.163, C:A.266, C:F.277, C:V.284
- Hydrogen bonds: C:Y.285
- Metal complexes: C:H.225
CLA.44: 32 residues within 4Å:- Chain C: W.51, I.75, L.76, H.79, L.83, W.85, G.159, L.162, L.163, A.165, K.166, F.170, L.267, S.268, M.270, G.271, A.274, T.275, V.278, Y.285, L.414, H.418, L.421, A.422, F.425
- Ligands: CLA.43, CLA.45, CLA.46, CLA.51, CLA.52, CLA.54, LMG.60
14 PLIP interactions:14 interactions with chain C,- Hydrophobic interactions: C:W.51, C:I.75, C:L.76, C:W.85, C:F.170, C:L.267, C:A.274, C:L.414, C:L.421, C:L.421, C:F.425
- Salt bridges: C:H.79, C:H.418
- Metal complexes: C:H.418
CLA.45: 25 residues within 4Å:- Chain C: A.45, I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106, L.113, L.162, L.267, M.270
- Ligands: CLA.43, CLA.44, CLA.49, CLA.51, CLA.52, CLA.54, CLA.55, STE.62
7 PLIP interactions:7 interactions with chain C,- Hydrophobic interactions: C:V.49, C:A.52, C:L.83, C:V.102, C:L.267
- Salt bridges: C:H.79
- Metal complexes: C:H.106
CLA.46: 30 residues within 4Å:- Chain A: F.197, F.285
- Chain C: W.51, M.55, F.58, E.59, H.62, Q.72, G.73, L.74, I.75, L.392, P.410, W.413, L.414, S.417, H.418, V.420, L.421, F.424
- Chain J: P.26, V.27, V.30
- Ligands: LHG.11, CLA.44, CLA.50, CLA.52, DGD.58, DGD.59, LMG.60
8 PLIP interactions:6 interactions with chain C, 1 interactions with chain J, 1 Ligand-Water interactions,- Hydrophobic interactions: C:W.51, C:F.58, C:I.75, C:I.75, C:W.413, C:W.413, J:V.30
- Metal complexes: H2O.15
CLA.47: 33 residues within 4Å:- Chain A: F.33, I.36, L.121, S.124, C.125, M.127, G.128, W.131
- Chain C: F.252, I.253, A.258, S.261, Y.262, G.265, A.266, M.269, L.426, H.429, L.430, A.433, G.434, A.436, R.437
- Chain H: V.12, V.16, F.19, F.23
- Ligands: CLA.5, LMG.10, CLA.43, CLA.49, BCR.56, DGD.57
13 PLIP interactions:7 interactions with chain C, 4 interactions with chain A, 2 interactions with chain H,- Hydrophobic interactions: C:Y.262, C:Y.262, C:L.430, A:F.33, A:W.131, A:W.131, A:W.131, H:V.16, H:F.23
- Water bridges: C:I.253, C:R.437
- Salt bridges: C:R.437
- Metal complexes: C:H.429
CLA.48: 29 residues within 4Å:- Chain C: T.146, L.149, L.153, L.201, L.202, W.211, I.231, C.232, A.234, G.235, G.236, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252, W.254, M.269
- Chain H: V.20, L.24
- Ligands: LMG.10, CLA.43, CLA.49, BCR.56, DGD.57
8 PLIP interactions:8 interactions with chain C,- Hydrophobic interactions: C:L.149, C:L.149, C:L.153, C:L.153, C:W.238
- Hydrogen bonds: C:F.245
- Salt bridges: C:H.239
- Metal complexes: C:H.239
CLA.49: 27 residues within 4Å:- Chain C: K.142, M.145, T.146, I.148, L.149, H.152, L.153, L.156, I.228, I.231, C.232, P.244, W.247, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.43, CLA.45, CLA.47, CLA.48, CLA.51, BCR.56
12 PLIP interactions:11 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:M.145, C:T.146, C:L.156, C:I.228, C:F.252, C:W.254, C:Y.259, C:Y.259, C:Y.262
- Hydrogen bonds: C:H.152
- Salt bridges: C:H.152
- Metal complexes: H2O.13
CLA.50: 31 residues within 4Å:- Chain C: F.21, W.23, W.24, A.25, G.26, N.27, A.28, I.31, E.257, L.260, L.264, L.267, F.424, F.425, V.427, G.428, W.431, H.432, R.435
- Chain J: V.30, L.33, F.37
- Ligands: LHG.11, SQD.12, CLA.46, CLA.51, CLA.52, CLA.53, DGD.58, DGD.59, LMG.60
13 PLIP interactions:12 interactions with chain C, 1 interactions with chain J,- Hydrophobic interactions: C:A.28, C:L.260, C:L.260, C:L.264, C:F.424, C:F.425, C:W.431, J:V.30
- Hydrogen bonds: C:N.27, C:W.431
- Salt bridges: C:H.432, C:R.435
- Metal complexes: C:H.432
CLA.51: 30 residues within 4Å:- Chain C: N.27, A.28, L.30, I.31, L.37, A.40, H.41, H.44, I.48, Y.137, W.139, M.145, I.148, H.152, L.156, G.256, E.257, Y.259, L.260, S.263, L.264, L.267, F.425
- Ligands: CLA.44, CLA.45, CLA.49, CLA.50, CLA.52, CLA.53, CLA.54
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:N.27, C:L.30, C:L.37, C:A.40, C:H.44, C:W.139, C:W.139, C:I.148, C:I.148, C:L.156, C:Y.259
- Hydrogen bonds: C:S.263
- Metal complexes: C:H.41
CLA.52: 21 residues within 4Å:- Chain C: N.27, H.44, L.47, I.48, W.51, L.267, L.421, F.424, F.425
- Chain J: P.29, V.30, F.32, L.33
- Ligands: LHG.11, CLA.44, CLA.45, CLA.46, CLA.50, CLA.51, CLA.53, LMG.60
12 PLIP interactions:10 interactions with chain C, 2 interactions with chain J,- Hydrophobic interactions: C:L.47, C:I.48, C:I.48, C:W.51, C:L.267, C:L.421, C:F.424, C:F.425, J:P.29, J:L.33
- Hydrogen bonds: C:N.27
- Metal complexes: C:H.44
CLA.53: 42 residues within 4Å:- Chain C: W.23, W.24, G.26, N.27, R.29, L.30, L.33, K.36, G.39, A.40, A.43, H.44, L.47, A.111, G.114, F.115, V.118, A.121, I.122
- Chain J: F.32, L.33, L.35, A.36, F.37, W.39, Q.40, R.46
- Chain S: I.35, I.36, L.39, N.45, L.46
- Chain T: M.19, V.20, V.23, P.24, A.28
- Ligands: CLA.50, CLA.51, CLA.52, BCR.85, BCR.86
15 PLIP interactions:4 interactions with chain C, 4 interactions with chain J, 3 interactions with chain S, 4 interactions with chain T,- Hydrophobic interactions: C:A.40, C:F.115, C:A.121, J:L.33, J:F.37, S:I.35, S:I.36, S:L.46, T:V.20, T:V.23, T:P.24, T:A.28
- Hydrogen bonds: C:R.29
- Water bridges: J:R.46
- pi-Stacking: J:W.39
CLA.54: 25 residues within 4Å:- Chain C: L.38, H.41, V.42, A.45, L.113, L.128, F.134, F.135, Y.137, K.144, I.148, F.151, H.152, I.154, V.155, L.156, I.158, G.159, L.162
- Ligands: CLA.43, CLA.44, CLA.45, CLA.51, CLA.55, BCR.95
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:L.38, C:H.41, C:L.128, C:F.134, C:F.151, C:V.155, C:I.158, C:I.158
- Water bridges: C:A.45
- Metal complexes: C:H.152
CLA.55: 17 residues within 4Å:- Chain C: L.38, V.42, V.112, L.113, F.115, G.116, Y.119, H.120, P.125, L.128, Y.131, S.132, F.135
- Ligands: CLA.45, CLA.54, STE.62, BCR.95
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:L.38, C:L.38, C:V.42, C:V.112, C:L.113, C:Y.119, C:L.128, C:Y.131, C:F.135, C:F.135, C:F.135
- Salt bridges: C:H.120
- Metal complexes: C:H.120
CLA.66: 35 residues within 4Å:- Chain A: M.183, V.205, F.206
- Chain D: L.45, W.48, L.122, F.146, P.149, V.152, F.153, S.155, V.156, F.157, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, G.278, L.279, S.282, A.283, V.286
- Ligands: CLA.2, CLA.3, PL9.9, PHO.64, CLA.67, LMG.71
14 PLIP interactions:14 interactions with chain D,- Hydrophobic interactions: D:L.122, D:V.152, D:F.181, D:L.182, D:F.185, D:Q.186, D:T.192, D:V.201, D:V.204, D:V.204, D:L.205, D:L.279
- pi-Stacking: D:W.191
- Metal complexes: D:H.197
CLA.67: 33 residues within 4Å:- Chain A: T.45, F.48, V.49, I.78, F.119, A.154, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain D: T.192, H.197, M.198, V.201, A.202, L.205, G.206, L.209
- Chain K: L.30
- Chain O: F.10, I.14, F.17
- Ligands: CLA.2, PHO.4, SQD.13, CLA.66, PL9.70, LHG.72, LHG.88
6 PLIP interactions:4 interactions with chain A, 1 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: A:T.45, A:F.158, A:F.180, A:F.182, D:L.209
- Metal complexes: H2O.3
CLA.68: 34 residues within 4Å:- Chain D: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, G.109, T.112, F.113, L.116, H.117, F.120
- Chain G: G.36, L.39, V.40, L.43
- Chain R: G.13, L.14, L.15, G.17, A.18, V.20, L.21
- Ligands: PL9.9, CLA.23, BCR.69, LMG.74, STE.75, SQD.79
15 PLIP interactions:4 interactions with chain R, 10 interactions with chain D, 1 interactions with chain G,- Hydrophobic interactions: R:L.15, R:L.15, R:A.18, R:V.20, D:L.36, D:P.39, D:L.43, D:W.93, D:W.93, D:L.116, G:L.43
- Hydrogen bonds: D:L.92
- Salt bridges: D:H.117
- pi-Stacking: D:F.113
- Metal complexes: D:H.117
CLA.97: 36 residues within 4Å:- Chain 8: F.17
- Chain U: F.119, A.123, Y.147, P.150, L.151, S.153, A.154, A.156, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, A.287, I.290
- Chain X: L.182, L.183, V.204, L.205, F.257
- Ligands: CLA.98, PHO.99, CLA.106, CLA.159, LHG.163
16 PLIP interactions:13 interactions with chain U, 2 interactions with chain X, 1 interactions with chain 8,- Hydrophobic interactions: U:M.183, U:F.186, U:Q.187, U:I.192, U:I.192, U:L.193, U:L.193, U:V.202, U:V.202, U:V.205, U:I.290, X:L.182, X:L.205, 8:F.17
- Hydrogen bonds: U:T.286
- Metal complexes: U:H.198
CLA.98: 31 residues within 4Å:- Chain U: L.193, H.198, Q.199, V.202, A.203, F.206, G.207, L.210, F.211, F.260, W.278
- Chain X: F.73, L.74, V.152, F.153, V.156, F.157, F.173, V.175, I.178, F.179, F.181, L.182
- Chain Z: L.26
- Ligands: CLA.97, PL9.105, DGD.154, PHO.158, CLA.159, LMG.166, LHG.169
12 PLIP interactions:5 interactions with chain U, 5 interactions with chain X, 1 interactions with chain Z, 1 Ligand-Water interactions,- Hydrophobic interactions: U:V.202, U:F.206, U:L.210, U:W.278, X:F.157, X:F.157, X:F.181, X:L.182, X:L.182, Z:L.26
- Water bridges: U:H.198
- Metal complexes: H2O.35
CLA.100: 29 residues within 4Å:- Chain 1: L.4, I.6, V.8, Y.9, I.10, V.11, V.12, T.13, F.15, V.16
- Chain U: V.35, I.36, P.39, T.40, A.43, F.93, Y.94, P.95, I.96, W.97, Q.113, L.114, F.117, H.118, L.121
- Ligands: DGD.38, BCR.101, LMG.109, CLA.142
22 PLIP interactions:10 interactions with chain 1, 12 interactions with chain U,- Hydrophobic interactions: 1:I.6, 1:Y.9, 1:Y.9, 1:I.10, 1:V.11, 1:V.12, 1:V.12, 1:T.13, 1:F.15, 1:F.15, U:I.36, U:P.39, U:T.40, U:F.93, U:P.95, U:I.96, U:W.97, U:L.114, U:F.117
- Hydrogen bonds: U:I.96
- Salt bridges: U:H.118
- Metal complexes: U:H.118
CLA.106: 34 residues within 4Å:- Chain 4: L.30
- Chain 8: F.10, I.14, F.17
- Chain U: T.45, F.48, V.49, I.78, F.119, S.153, A.154, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain X: T.192, H.197, M.198, V.201, A.202, L.205, G.206, L.209
- Ligands: CLA.97, PHO.99, SQD.108, CLA.159, PL9.162, LHG.163, LHG.177
8 PLIP interactions:5 interactions with chain U, 2 interactions with chain X, 1 Ligand-Water interactions,- Hydrophobic interactions: U:T.45, U:V.157, U:F.158, U:F.180, U:F.182, X:V.201, X:L.209
- Metal complexes: H2O.35
CLA.112: 15 residues within 4Å:- Chain 0: F.34, L.37, F.41, I.44, I.45, I.48, L.55
- Chain V: W.185, G.186, P.187, F.190, A.204, V.208
- Ligands: CLA.113, BCR.185
8 PLIP interactions:4 interactions with chain V, 3 interactions with chain 0, 1 Ligand-Water interactions,- Hydrophobic interactions: V:W.185, V:P.187, V:F.190, V:F.190, 0:F.41, 0:F.41, 0:L.55
- Metal complexes: H2O.38
CLA.113: 34 residues within 4Å:- Chain 0: F.38, F.41, L.42, I.45, L.46, Y.49
- Chain V: E.184, W.185, G.189, F.190, P.192, G.197, V.198, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250, V.251, T.255
- Chain X: V.154, L.158, I.159, L.162
- Ligands: CLA.112, CLA.114, CLA.116, CLA.119, CLA.120, DGD.171, BCR.185
17 PLIP interactions:10 interactions with chain V, 6 interactions with chain 0, 1 interactions with chain X,- Hydrophobic interactions: V:F.190, V:F.190, V:F.190, V:A.200, V:V.208, V:V.208, V:F.246, V:F.247, V:F.250, 0:F.38, 0:F.41, 0:I.45, 0:L.46, 0:Y.49, X:I.159
- Metal complexes: V:H.201
- pi-Stacking: 0:F.41
CLA.114: 29 residues within 4Å:- Chain 0: M.35, F.38, L.39, L.42
- Chain V: R.68, L.69, A.146, L.149, C.150, F.153, L.158, M.166, V.198, H.201, H.202, A.244, F.247, A.248, V.251, V.252, T.262
- Ligands: CLA.113, CLA.115, CLA.116, CLA.117, CLA.119, CLA.120, CLA.121, BCR.185
13 PLIP interactions:12 interactions with chain V, 1 interactions with chain 0,- Hydrophobic interactions: V:A.146, V:L.149, V:F.153, V:F.153, V:F.247, V:A.248, V:V.252, 0:L.42
- Hydrogen bonds: V:R.68, V:R.68
- Salt bridges: V:R.68
- pi-Cation interactions: V:H.201
- Metal complexes: V:H.202
CLA.115: 30 residues within 4Å:- Chain V: W.33, F.61, V.62, F.65, R.68, L.145, L.148, L.149, V.245, F.246, A.248, A.249, V.252, M.256, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.114, CLA.116, CLA.117, CLA.118, CLA.121, CLA.122, CLA.123, CLA.124, CLA.126, BCR.129, STE.132
15 PLIP interactions:15 interactions with chain V,- Hydrophobic interactions: V:W.33, V:F.61, V:F.65, V:L.145, V:L.148, V:V.245, V:A.248, V:A.249, V:V.252, V:F.458, V:F.458, V:F.462, V:F.462
- Salt bridges: V:R.68
- Metal complexes: V:H.455
CLA.116: 36 residues within 4Å:- Chain V: T.27, V.30, A.31, W.33, A.34, G.35, A.38, V.62, F.65, M.66, R.68, L.69, V.71, V.96, H.100, L.103, L.107, L.143, A.146, G.147, C.150, A.205, G.206, V.208, G.209
- Ligands: CLA.113, CLA.114, CLA.115, CLA.117, CLA.120, CLA.121, CLA.123, CLA.124, CLA.126, BCR.130, STE.132
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:T.27, V:V.30, V:A.31, V:W.33, V:A.34, V:V.96, V:L.103, V:L.143, V:A.146
- Hydrogen bonds: V:M.66, V:R.68
- Metal complexes: V:H.100
CLA.117: 29 residues within 4Å:- Chain V: M.66, L.69, G.70, V.71, F.90, W.91, V.96, L.98, A.99, H.100, V.102, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: SQD.13, DGD.14, STE.83, CLA.114, CLA.115, CLA.116, BCR.130, STE.132
14 PLIP interactions:14 interactions with chain V,- Hydrophobic interactions: V:L.69, V:V.71, V:F.90, V:W.91, V:W.91, V:W.91, V:L.98, V:L.103, V:L.103, V:L.149, V:F.156, V:F.162, V:F.162
- Metal complexes: V:H.157
CLA.118: 39 residues within 4Å:- Chain 4: L.23, L.27, F.31, F.35
- Chain 5: F.14
- Chain V: W.33, M.37, Y.40, E.41, T.44, Q.58, G.59, M.60, F.61, L.324, F.325, T.327, G.328, P.329, P.447, W.450, F.451, F.453, A.454, H.455, F.458
- Chain X: F.196, M.199, T.277, M.281
- Ligands: STE.92, BCR.93, CLA.115, CLA.124, BCR.128, BCR.129, LHG.134, PL9.162, LMG.179
13 PLIP interactions:9 interactions with chain V, 1 interactions with chain X, 2 interactions with chain 4, 1 Ligand-Water interactions,- Hydrophobic interactions: V:Y.40, V:F.61, V:F.325, V:T.327, V:W.450, X:F.196, 4:F.31, 4:F.31
- Hydrogen bonds: V:Y.40, V:G.328
- Water bridges: V:W.450
- pi-Stacking: V:F.61
- Metal complexes: H2O.41
CLA.119: 35 residues within 4Å:- Chain 0: L.39, L.43, L.46
- Chain V: L.229, T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, G.470, A.471, T.473, L.474
- Chain X: L.36, L.89, L.91, L.116, F.120, I.123, M.126, L.127, F.130, I.150
- Ligands: CLA.113, CLA.114, CLA.120, CLA.121, STE.135, CLA.160, STE.167, DGD.171
17 PLIP interactions:6 interactions with chain X, 9 interactions with chain V, 2 interactions with chain 0,- Hydrophobic interactions: X:F.120, X:I.123, X:I.123, X:M.126, X:L.127, X:I.150, V:A.243, V:F.246, V:F.247, V:F.463, V:F.463, V:I.467, V:L.474, 0:L.39, 0:L.43
- Hydrogen bonds: V:S.239
- Metal complexes: V:H.466
CLA.120: 36 residues within 4Å:- Chain 0: T.27, T.28, L.30, M.31, F.34, M.35, L.39, L.42, L.43, L.46
- Chain V: F.139, L.143, V.208, I.211, A.212, F.215, H.216, V.219, R.220, P.221, P.222, L.225, L.229, M.231, F.247
- Chain X: F.120, I.123
- Ligands: CLA.113, CLA.114, CLA.116, CLA.119, CLA.121, STE.135, LMG.165, DGD.171, BCR.185
14 PLIP interactions:9 interactions with chain V, 4 interactions with chain 0, 1 interactions with chain X,- Hydrophobic interactions: V:F.139, V:F.139, V:V.208, V:A.212, V:F.215, V:F.215, V:L.225, 0:M.31, 0:F.34, 0:L.42, X:F.120
- Salt bridges: V:H.216
- Metal complexes: V:H.216
- Hydrogen bonds: 0:T.27
CLA.121: 28 residues within 4Å:- Chain V: L.19, H.23, L.135, P.136, M.138, F.139, H.142, L.143, L.145, A.146, L.149, L.229, M.231, I.234, T.236, V.237, S.240, S.241, A.244, V.245
- Ligands: CLA.114, CLA.115, CLA.116, CLA.119, CLA.120, CLA.123, CLA.126, BCR.185
7 PLIP interactions:6 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: V:F.139, V:L.145, V:M.231, V:I.234, V:T.236
- Hydrogen bonds: V:H.142
- Metal complexes: H2O.38
CLA.122: 27 residues within 4Å:- Chain 5: F.21
- Chain V: W.5, Y.6, R.7, V.8, H.9, T.10, I.13, E.235, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472, F.479
- Ligands: CLA.115, CLA.123, CLA.124, CLA.125, BCR.129, LHG.134, LHG.177
17 PLIP interactions:16 interactions with chain V, 1 interactions with chain 5,- Hydrophobic interactions: V:W.5, V:W.5, V:T.10, V:L.238, V:L.238, V:I.242, V:F.462, V:F.464, V:W.468, 5:F.21
- Hydrogen bonds: V:V.8, V:H.9, V:W.468
- Salt bridges: V:H.9, V:R.472
- pi-Stacking: V:W.468
- Metal complexes: V:H.469
CLA.123: 26 residues within 4Å:- Chain V: H.9, T.10, L.12, I.13, L.19, A.22, H.23, H.26, T.27, V.30, I.234, E.235, V.237, L.238, S.241, I.242, V.245, A.248, F.462
- Ligands: CLA.115, CLA.116, CLA.121, CLA.122, CLA.124, CLA.125, CLA.126
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:H.9, V:L.12, V:L.12, V:L.19, V:H.26, V:T.27, V:I.234, V:I.234, V:V.237, V:L.238
- Salt bridges: V:H.23
- Metal complexes: V:H.23
CLA.124: 21 residues within 4Å:- Chain 5: F.14
- Chain V: H.9, H.26, L.29, V.30, W.33, V.245, F.458, L.461, F.462
- Ligands: CLA.115, CLA.116, CLA.118, CLA.122, CLA.123, CLA.125, BCR.128, BCR.129, LHG.134, LHG.177, LMG.179
7 PLIP interactions:6 interactions with chain V, 1 interactions with chain 5,- Hydrophobic interactions: V:V.30, V:W.33, V:W.33, V:F.462, 5:F.14
- Salt bridges: V:H.9
- Metal complexes: V:H.26
CLA.125: 29 residues within 4Å:- Chain 4: Q.8, V.10
- Chain 5: L.13, V.17, F.21, L.25
- Chain L: L.16
- Chain O: F.8
- Chain V: L.3, V.8, H.9, V.11, L.12, A.22, M.25, H.26, L.29, W.115
- Ligands: SQD.87, STE.91, STE.92, BCR.93, CLA.122, CLA.123, CLA.124, BCR.128, LHG.177, STE.178, LMG.179
9 PLIP interactions:3 interactions with chain 5, 6 interactions with chain V,- Hydrophobic interactions: 5:L.13, 5:F.21, 5:L.25, V:V.8, V:L.12, V:M.25, V:L.29, V:W.115
- Metal complexes: V:H.9
CLA.126: 25 residues within 4Å:- Chain 0: L.7, L.11, L.14, N.15
- Chain V: P.16, L.19, I.20, H.23, L.24, T.27, L.103, L.107, L.122, F.123, L.133, M.138, I.141, H.142, L.145
- Ligands: CLA.115, CLA.116, CLA.121, CLA.123, CLA.127, BCR.130
10 PLIP interactions:4 interactions with chain 0, 6 interactions with chain V,- Hydrophobic interactions: 0:L.11, 0:L.11, 0:L.14, 0:L.14, V:I.20, V:L.133, V:I.141, V:L.145
- Hydrogen bonds: V:H.23
- Metal complexes: V:H.142
CLA.127: 17 residues within 4Å:- Chain 0: T.5, W.6, L.7, G.8, L.11
- Chain V: I.20, L.24, L.107, A.110, W.113, H.114, L.120, L.122, F.123
- Ligands: SQD.13, CLA.126, BCR.130
12 PLIP interactions:4 interactions with chain 0, 8 interactions with chain V,- Hydrophobic interactions: 0:L.7, 0:L.11, V:L.24, V:A.110, V:W.113, V:W.113, V:L.120, V:L.122
- Hydrogen bonds: 0:T.5
- Water bridges: 0:W.6
- pi-Stacking: V:W.113
- Metal complexes: V:H.114
CLA.138: 30 residues within 4Å:- Chain W: T.82, L.83, L.156, G.159, A.160, L.163, L.173, W.211, I.212, V.215, L.218, V.221, H.225, I.228, C.232, A.266, M.269, M.270, I.273, A.274, F.277, V.284, Y.285
- Ligands: CLA.139, CLA.140, CLA.142, CLA.143, CLA.144, CLA.149, BCR.151
7 PLIP interactions:7 interactions with chain W,- Hydrophobic interactions: W:L.163, W:I.228, W:A.266, W:M.270, W:V.284
- Hydrogen bonds: W:Y.285
- Metal complexes: W:H.225
CLA.139: 33 residues within 4Å:- Chain W: W.51, I.75, L.76, H.79, L.83, W.85, G.159, L.162, L.163, A.165, K.166, F.170, L.267, S.268, M.270, G.271, A.274, T.275, V.278, Y.285, L.414, H.418, L.421, A.422, F.425
- Ligands: CLA.138, CLA.140, CLA.141, CLA.146, CLA.147, CLA.149, LMG.155, STE.156
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:W.51, W:I.75, W:L.76, W:K.166, W:F.170, W:L.267, W:A.274, W:L.414, W:L.421, W:F.425
- Salt bridges: W:H.79, W:H.418
- Metal complexes: W:H.418
CLA.140: 26 residues within 4Å:- Chain W: A.45, I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106, L.113, L.156, L.162, L.267, M.270
- Ligands: CLA.138, CLA.139, CLA.144, CLA.146, CLA.147, CLA.149, CLA.150, STE.156
7 PLIP interactions:7 interactions with chain W,- Hydrophobic interactions: W:I.48, W:V.49, W:A.52, W:L.83, W:L.267
- Salt bridges: W:H.79
- Metal complexes: W:H.106
CLA.141: 32 residues within 4Å:- Chain 3: P.26, V.27, P.29, V.30
- Chain U: F.197, F.285
- Chain W: W.51, M.55, F.58, E.59, H.62, Q.72, G.73, L.74, I.75, L.392, S.394, P.410, W.413, L.414, S.417, H.418, V.420, L.421, F.424
- Ligands: CLA.139, CLA.145, CLA.147, DGD.153, DGD.154, LMG.155, LHG.164
7 PLIP interactions:5 interactions with chain W, 1 interactions with chain 3, 1 Ligand-Water interactions,- Hydrophobic interactions: W:I.75, W:I.75, W:W.413, W:W.413, W:V.420, 3:V.30
- Metal complexes: H2O.46
CLA.142: 33 residues within 4Å:- Chain 1: V.12, V.16, F.19, F.23
- Chain U: F.33, I.36, L.121, S.124, C.125, M.127, G.128, W.131
- Chain W: F.252, I.253, A.258, S.261, Y.262, G.265, A.266, M.269, L.426, H.429, L.430, A.433, G.434, A.436, R.437
- Ligands: CLA.100, LMG.109, CLA.138, CLA.144, BCR.151, DGD.152
16 PLIP interactions:3 interactions with chain 1, 9 interactions with chain W, 4 interactions with chain U,- Hydrophobic interactions: 1:V.16, 1:F.19, 1:F.23, W:F.252, W:Y.262, W:Y.262, W:L.430, W:A.433, U:F.33, U:W.131, U:W.131, U:W.131
- Water bridges: W:I.253, W:I.253
- Salt bridges: W:R.437
- Metal complexes: W:H.429
CLA.143: 27 residues within 4Å:- Chain 1: V.20, L.24
- Chain W: T.146, L.149, L.153, L.201, L.202, W.211, I.231, C.232, A.234, G.235, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252, W.254, M.269
- Ligands: LMG.109, CLA.138, CLA.144, BCR.151
9 PLIP interactions:9 interactions with chain W,- Hydrophobic interactions: W:L.149, W:L.153, W:L.153, W:I.231, W:W.238, W:W.247
- Hydrogen bonds: W:F.245
- Salt bridges: W:H.239
- Metal complexes: W:H.239
CLA.144: 27 residues within 4Å:- Chain W: K.142, M.145, T.146, I.148, L.149, H.152, L.153, L.156, I.228, I.231, C.232, P.244, W.247, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.138, CLA.140, CLA.142, CLA.143, CLA.146, BCR.151
15 PLIP interactions:14 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: W:M.145, W:T.146, W:L.156, W:W.247, W:F.252, W:F.252, W:W.254, W:Y.259, W:Y.259, W:Y.262, W:Y.262, W:A.266
- Hydrogen bonds: W:H.152
- Salt bridges: W:H.152
- Metal complexes: H2O.43
CLA.145: 29 residues within 4Å:- Chain 3: L.33, F.37
- Chain W: F.21, W.23, W.24, A.25, G.26, N.27, A.28, I.31, E.257, L.260, L.264, F.424, F.425, V.427, G.428, W.431, H.432, R.435
- Ligands: SQD.107, CLA.141, CLA.146, CLA.147, CLA.148, DGD.153, DGD.154, LMG.155, LHG.164
14 PLIP interactions:13 interactions with chain W, 1 interactions with chain 3,- Hydrophobic interactions: W:N.27, W:L.260, W:L.260, W:L.264, W:F.425, W:F.425, W:W.431, 3:L.33
- Hydrogen bonds: W:N.27, W:W.431
- Salt bridges: W:H.432, W:R.435
- pi-Stacking: W:W.431
- Metal complexes: W:H.432
CLA.146: 30 residues within 4Å:- Chain W: N.27, A.28, L.30, I.31, L.37, A.40, H.41, H.44, I.48, Y.137, W.139, M.145, I.148, H.152, L.156, G.256, E.257, Y.259, L.260, S.263, L.264, L.267, F.425
- Ligands: CLA.139, CLA.140, CLA.144, CLA.145, CLA.147, CLA.148, CLA.149
10 PLIP interactions:10 interactions with chain W,- Hydrophobic interactions: W:N.27, W:L.37, W:A.40, W:H.44, W:W.139, W:W.139, W:I.148, W:Y.259
- Hydrogen bonds: W:S.263
- Metal complexes: W:H.41
CLA.147: 21 residues within 4Å:- Chain 3: P.29, V.30, F.32, L.33
- Chain W: N.27, H.44, L.47, I.48, W.51, L.267, L.421, F.424, F.425
- Ligands: CLA.139, CLA.140, CLA.141, CLA.145, CLA.146, CLA.148, LMG.155, LHG.164
11 PLIP interactions:9 interactions with chain W, 2 interactions with chain 3,- Hydrophobic interactions: W:L.47, W:I.48, W:W.51, W:W.51, W:L.267, W:L.421, W:F.425, 3:P.29, 3:L.33
- Hydrogen bonds: W:N.27
- Metal complexes: W:H.44
CLA.148: 45 residues within 4Å:- Chain 3: F.32, L.33, L.35, A.36, F.37, W.39, Q.40
- Chain W: T.12, N.13, R.14, W.23, W.24, G.26, N.27, R.29, L.30, L.33, K.36, L.37, G.39, A.40, A.43, H.44, L.47, A.111, G.114, F.115, V.118, A.121, I.122
- Ligands: CLA.145, CLA.146, CLA.147, BCR.174, BCR.175
- Chain c: I.35, I.36, L.39, N.45, L.46
- Chain d: M.19, V.20, V.23, P.24, A.28
25 PLIP interactions:9 interactions with chain 3, 8 interactions with chain W, 4 interactions with chain d, 4 interactions with chain c,- Hydrophobic interactions: 3:F.32, 3:F.32, 3:L.33, 3:F.37, 3:W.39, 3:W.39, 3:Q.40, W:L.30, W:L.30, W:V.118, W:A.121, W:I.122, d:V.20, d:P.24, d:P.24, d:A.28, c:I.35, c:I.36, c:L.39, c:L.46
- pi-Stacking: 3:W.39, 3:W.39
- Hydrogen bonds: W:R.14, W:R.29
- Salt bridges: W:R.14
CLA.149: 27 residues within 4Å:- Chain W: S.34, L.38, H.41, V.42, A.45, L.113, L.128, F.134, F.135, Y.137, K.144, I.148, F.151, H.152, I.154, V.155, L.156, I.158, G.159, L.162
- Ligands: CLA.138, CLA.139, CLA.140, CLA.146, CLA.150, LMG.157, BCR.173
12 PLIP interactions:12 interactions with chain W,- Hydrophobic interactions: W:H.41, W:F.134, W:Y.137, W:Y.137, W:I.148, W:I.148, W:F.151, W:F.151, W:I.154, W:I.158, W:L.162
- Metal complexes: W:H.152
CLA.150: 18 residues within 4Å:- Chain W: L.38, V.42, V.112, L.113, F.115, G.116, Y.119, H.120, G.124, P.125, L.128, Y.131, S.132, F.135
- Ligands: CLA.140, CLA.149, STE.156, BCR.173
16 PLIP interactions:16 interactions with chain W,- Hydrophobic interactions: W:L.38, W:L.38, W:V.42, W:V.112, W:L.113, W:Y.119, W:Y.119, W:L.128, W:Y.131, W:F.135, W:F.135, W:F.135, W:F.135
- Hydrogen bonds: W:Y.119
- Salt bridges: W:H.120
- Metal complexes: W:H.120
CLA.159: 35 residues within 4Å:- Chain U: M.183, V.205, F.206
- Chain X: L.45, W.48, L.122, F.146, P.149, V.152, F.153, S.155, V.156, F.157, F.181, L.182, L.183, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, L.279, S.282, A.283, V.286
- Ligands: CLA.97, CLA.98, PL9.105, CLA.106, PHO.158, LMG.166
18 PLIP interactions:17 interactions with chain X, 1 interactions with chain U,- Hydrophobic interactions: X:W.48, X:P.149, X:V.152, X:F.153, X:F.181, X:L.182, X:F.185, X:Q.186, X:W.191, X:T.192, X:V.201, X:V.201, X:V.204, X:L.205, X:L.279, U:F.206
- pi-Stacking: X:W.191
- Metal complexes: X:H.197
CLA.160: 36 residues within 4Å:- Chain 0: A.32, V.33, G.36, L.37, L.39, V.40, L.43
- Chain X: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, G.109, T.112, F.113, L.116, H.117, F.120
- Ligands: PL9.105, CLA.119, BCR.161, LMG.165, STE.167, STE.186
- Chain b: G.13, L.14, G.17, A.18, V.20, L.21
16 PLIP interactions:11 interactions with chain X, 2 interactions with chain 0, 3 interactions with chain b,- Hydrophobic interactions: X:L.36, X:P.39, X:P.39, X:L.43, X:W.93, X:F.113, X:L.116, 0:A.32, 0:V.40, b:L.14, b:A.18, b:V.20
- Hydrogen bonds: X:L.92
- Salt bridges: X:H.117
- pi-Stacking: X:F.113
- Metal complexes: X:H.117
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.4: 36 residues within 4Å:- Chain A: L.41, A.44, T.45, F.48, I.115, F.119, A.123, Y.126, Q.130, A.146, Y.147, A.149, P.150, F.158, M.172, P.173, L.174, G.175, I.176, T.179, V.205, P.279, V.280, V.283
- Chain D: L.205, A.208, L.209, A.212, I.213, W.253, F.257
- Ligands: CLA.2, SQD.13, CLA.67, PL9.70, LHG.72
18 PLIP interactions:15 interactions with chain A, 3 interactions with chain D- Hydrophobic interactions: A:L.41, A:A.44, A:F.48, A:F.48, A:I.115, A:F.119, A:A.146, A:Y.147, A:Y.147, A:P.150, A:F.158, A:V.283, D:L.209, D:I.213, D:I.213
- Hydrogen bonds: A:Y.126, A:Q.130, A:Y.147
PHO.64: 40 residues within 4Å:- Chain A: F.206, A.209, L.210, F.211, A.213, M.214, F.255, L.258, I.259
- Chain D: L.37, A.41, A.44, L.45, W.48, I.114, A.115, G.118, A.119, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, A.148, P.149, F.153, F.173, G.174, V.175, I.178, V.204, P.275, V.276, L.279
- Ligands: CLA.3, PL9.9, CLA.66, LHG.76
22 PLIP interactions:3 interactions with chain A, 19 interactions with chain D- Hydrophobic interactions: A:F.206, A:A.209, A:A.213, D:A.41, D:W.48, D:W.48, D:W.48, D:I.114, D:L.122, D:F.125, D:F.125, D:A.145, D:F.146, D:P.149, D:F.153, D:F.173, D:V.175, D:P.275, D:L.279
- Hydrogen bonds: D:Q.129, D:N.142
- pi-Stacking: D:F.146
PHO.99: 36 residues within 4Å:- Chain U: L.41, A.44, T.45, F.48, I.115, F.119, A.123, Y.126, Q.130, A.146, Y.147, A.149, P.150, F.158, M.172, P.173, L.174, G.175, I.176, T.179, V.205, P.279, V.280, V.283
- Chain X: L.205, A.208, L.209, A.212, I.213, W.253, F.257
- Ligands: CLA.97, CLA.106, SQD.108, PL9.162, LHG.163
18 PLIP interactions:3 interactions with chain X, 15 interactions with chain U- Hydrophobic interactions: X:L.205, X:A.208, X:A.212, U:L.41, U:A.44, U:F.48, U:F.48, U:I.115, U:Y.126, U:A.146, U:Y.147, U:Y.147, U:P.150, U:P.279, U:V.283
- Hydrogen bonds: U:Y.126, U:Q.130, U:Y.147
PHO.158: 38 residues within 4Å:- Chain U: F.206, A.209, L.210, F.211, A.213, M.214, F.255, L.258, I.259
- Chain X: L.37, A.41, A.44, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, A.148, P.149, F.153, F.173, G.174, V.175, I.178, V.204, P.275, V.276, L.279
- Ligands: CLA.98, PL9.105, CLA.159, LHG.169
22 PLIP interactions:21 interactions with chain X, 1 interactions with chain U- Hydrophobic interactions: X:A.41, X:A.44, X:W.48, X:W.48, X:W.48, X:W.48, X:I.114, X:L.122, X:F.125, X:F.125, X:A.145, X:F.146, X:F.146, X:A.148, X:P.149, X:F.153, X:P.275, X:L.279, U:F.206
- Hydrogen bonds: X:Q.129, X:N.142
- pi-Stacking: X:F.146
- 22 x BCR: BETA-CAROTENE(Non-covalent)
BCR.6: 30 residues within 4Å:- Chain A: F.17, W.20, V.21, V.30, G.34, V.35, I.38, P.39, L.42, A.43, I.46, C.47, I.50, A.51, A.54, A.55, P.56, I.96, L.102, W.105, L.106, P.111, L.114
- Chain H: F.14, F.15, L.18
- Chain V: W.75
- Ligands: CLA.5, DGD.14, STE.83
Ligand excluded by PLIPBCR.32: 22 residues within 4Å:- Chain 8: F.19
- Chain B: A.21, A.22, M.25, L.29, F.108, A.111, C.112, W.115
- Chain L: L.6, I.9, A.10, L.13
- Ligands: CLA.22, CLA.28, CLA.29, BCR.33, SQD.37, STE.40, LHG.88, LMG.89, BCR.181
Ligand excluded by PLIPBCR.33: 23 residues within 4Å:- Chain B: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105, L.106, F.108, L.109, F.458
- Ligands: CLA.19, CLA.22, CLA.26, CLA.28, BCR.32, SQD.37, DGD.38, LMG.89, BCR.181, STE.182, STE.183
Ligand excluded by PLIPBCR.34: 19 residues within 4Å:- Chain 8: F.18, F.22, F.23
- Chain B: W.91, L.103, L.106, L.107, L.109, A.110, C.112, W.113, V.116, Y.117
- Ligands: CLA.20, CLA.21, CLA.30, CLA.31, STE.35, SQD.108
Ligand excluded by PLIPBCR.56: 25 residues within 4Å:- Chain C: I.197, F.198, Y.200, L.201, I.212, V.215, D.220, V.221, G.224, H.225, W.227, I.228, I.231, A.251, F.252, M.269, F.277
- Chain H: F.19, V.20, F.23, L.24
- Ligands: CLA.43, CLA.47, CLA.48, CLA.49
Ligand excluded by PLIPBCR.69: 25 residues within 4Å:- Chain D: Y.42, L.43, L.45, G.46, G.47, L.49, T.50, L.92, F.101, W.104, L.110, F.113
- Chain F: T.25, L.26, P.29, T.30, F.33, L.34, I.37
- Chain I: V.21, V.25, F.28
- Ligands: PL9.9, CLA.68, LMG.71
Ligand excluded by PLIPBCR.80: 21 residues within 4Å:- Chain B: P.187, V.208
- Chain G: M.31, F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Chain R: T.2, I.3, L.7, F.11
- Ligands: CLA.16, CLA.17, CLA.18, CLA.24, CLA.25, STE.82
Ligand excluded by PLIPBCR.85: 31 residues within 4Å:- Chain C: F.50, L.107
- Chain I: W.11, A.14, T.15, G.18, M.19, I.22
- Chain J: L.21, L.25, I.28, L.31, F.32, A.34, L.35, F.37, V.38, A.41, F.45
- Chain S: I.28, G.29, A.31, G.32, P.33
- Chain T: V.13, S.16, F.17, V.20
- Ligands: SQD.12, CLA.53, BCR.86
Ligand excluded by PLIPBCR.86: 37 residues within 4Å:- Chain C: A.40, A.43, H.44, G.46, L.47, F.50, L.57, F.100, V.104, L.107, I.108, S.110, A.111, G.114, V.118, A.121, I.122
- Chain J: L.11, Y.15, F.18, L.21, V.22, L.25, F.32, L.35, A.36, W.39
- Chain T: L.9, L.12, V.13, S.16, V.20, W.47, V.54
- Ligands: CLA.53, BCR.85, BCR.95
Ligand excluded by PLIPBCR.93: 28 residues within 4Å:- Chain A: L.28
- Chain O: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain V: W.33, S.36, M.37, Y.40, F.108, L.109
- Ligands: SQD.13, DGD.14, LHG.72, SQD.87, STE.92, CLA.118, CLA.125, BCR.128, BCR.129, STE.131, STE.136
Ligand excluded by PLIPBCR.95: 20 residues within 4Å:- Chain C: F.97, F.100, V.101, V.104, V.105, I.108, S.109, V.112, L.113, F.135
- Chain J: Y.15
- Chain T: V.51, V.54, G.55, N.58, F.59
- Ligands: CLA.54, CLA.55, STE.62, BCR.86
Ligand excluded by PLIPBCR.101: 30 residues within 4Å:- Chain 1: F.14, F.15, L.18
- Chain B: W.75
- Chain U: F.17, W.20, V.21, V.30, G.34, V.35, I.38, P.39, L.42, A.43, I.46, C.47, I.50, A.51, A.54, A.55, P.56, I.96, L.102, W.105, L.106, P.111, L.114
- Ligands: DGD.38, CLA.100, STE.110
Ligand excluded by PLIPBCR.128: 22 residues within 4Å:- Chain 5: L.6, I.9, A.10, L.13
- Chain O: F.19
- Chain V: A.21, A.22, M.25, L.29, F.108, A.111, C.112, W.115
- Ligands: SQD.87, STE.92, BCR.93, CLA.118, CLA.124, CLA.125, BCR.129, LHG.177, LMG.179
Ligand excluded by PLIPBCR.129: 25 residues within 4Å:- Chain V: L.29, V.30, G.32, W.33, S.36, I.101, V.102, S.104, G.105, L.106, F.108, L.109, F.458
- Ligands: DGD.14, SQD.87, BCR.93, CLA.115, CLA.118, CLA.122, CLA.124, BCR.128, STE.131, STE.136, LHG.177, LMG.179
Ligand excluded by PLIPBCR.130: 19 residues within 4Å:- Chain O: F.18, F.22, F.23
- Chain V: W.91, L.103, L.106, L.107, L.109, A.110, C.112, W.113, V.116, Y.117
- Ligands: SQD.13, CLA.116, CLA.117, CLA.126, CLA.127, STE.132
Ligand excluded by PLIPBCR.151: 25 residues within 4Å:- Chain 1: F.19, V.20, F.23, L.24
- Chain W: I.197, F.198, Y.200, L.201, I.212, V.215, D.220, V.221, G.224, H.225, W.227, I.228, I.231, A.251, F.252, M.269, F.277
- Ligands: CLA.138, CLA.142, CLA.143, CLA.144
Ligand excluded by PLIPBCR.161: 24 residues within 4Å:- Chain 2: V.21, V.25, F.28
- Chain X: Y.42, L.43, L.45, G.46, G.47, L.49, T.50, F.101, W.104, L.110, F.113
- Chain Z: T.25, L.26, P.29, T.30, F.33, L.34, I.37
- Ligands: DGD.153, CLA.160, LMG.166
Ligand excluded by PLIPBCR.173: 22 residues within 4Å:- Chain 3: Y.15
- Chain W: F.97, F.100, V.101, V.104, V.105, I.108, S.109, V.112, L.113, F.134, F.135
- Ligands: CLA.149, CLA.150, STE.156, BCR.175
- Chain d: V.51, L.52, V.54, G.55, N.58, F.59
Ligand excluded by PLIPBCR.174: 31 residues within 4Å:- Chain 2: W.11, A.14, T.15, G.18, M.19
- Chain 3: L.21, L.25, I.28, L.31, F.32, A.34, L.35, F.37, V.38, A.41, F.45
- Chain W: F.50, L.107
- Ligands: SQD.107, CLA.148, BCR.175, STE.176
- Chain c: I.28, G.29, A.31, G.32, P.33
- Chain d: V.13, S.16, F.17, V.20
Ligand excluded by PLIPBCR.175: 36 residues within 4Å:- Chain 3: Y.15, F.18, L.21, V.22, L.25, F.32, L.35, A.36, W.39
- Chain W: A.40, A.43, H.44, G.46, L.47, F.50, L.57, F.100, V.104, L.107, I.108, S.110, A.111, G.114, V.118, A.121, I.122
- Ligands: CLA.148, BCR.173, BCR.174
- Chain d: L.9, L.12, V.13, S.16, V.20, W.47, V.54
Ligand excluded by PLIPBCR.181: 26 residues within 4Å:- Chain 8: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain B: W.33, S.36, M.37, Y.40, F.108, L.109
- Chain U: L.28
- Ligands: CLA.22, CLA.29, BCR.32, BCR.33, SQD.37, STE.40, SQD.108, LHG.163, STE.182
Ligand excluded by PLIPBCR.185: 20 residues within 4Å:- Chain 0: M.31, F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Chain V: P.187, V.208
- Ligands: CLA.112, CLA.113, CLA.114, CLA.120, CLA.121
- Chain b: T.2, I.3, L.7, F.11
Ligand excluded by PLIP- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.7: 6 residues within 4Å:- Chain A: N.181, V.185, H.332, E.333
- Chain D: K.317, L.321
Ligand excluded by PLIPCL.8: 5 residues within 4Å:- Chain A: H.337, N.338, F.339
- Chain C: G.341, E.342
Ligand excluded by PLIPCL.102: 6 residues within 4Å:- Chain U: N.181, V.185, H.332, E.333
- Chain X: K.317, L.321
Ligand excluded by PLIPCL.103: 5 residues within 4Å:- Chain U: H.337, N.338, F.339
- Chain W: G.341, E.342
Ligand excluded by PLIP- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.9: 36 residues within 4Å:- Chain A: L.210, F.211, M.214, H.215, L.218, V.219, Y.246, I.248, A.251, H.252, F.255, I.259, A.263, S.264, F.265, N.266, L.271, F.274, L.275
- Chain D: F.38, P.39, A.41, Y.42, L.43, L.45
- Chain F: V.21, A.22, T.25, L.26
- Ligands: CLA.3, PHO.64, CLA.66, CLA.68, BCR.69, LHG.76, SQD.79
15 PLIP interactions:11 interactions with chain A, 2 interactions with chain D, 2 interactions with chain F- Hydrophobic interactions: A:M.214, A:L.218, A:F.255, A:F.255, A:L.271, A:L.271, A:F.274, A:L.275, D:Y.42, D:L.45, F:A.22, F:T.25
- Hydrogen bonds: A:H.215, A:S.264, A:F.265
PL9.70: 47 residues within 4Å:- Chain A: F.48, V.49, F.52, I.53, L.71, I.77, I.176
- Chain D: M.198, M.199, A.202, G.203, G.206, L.209, L.210, I.213, H.214, T.217, V.218, Y.244, M.246, A.249, N.250, W.253, F.257, I.259, A.260, F.261, L.267, F.270, F.273, V.274, T.277, G.278, M.281
- Chain K: L.23, V.26, L.27, L.29, L.30
- Chain O: Y.6, V.7, F.10
- Ligands: PHO.4, CLA.22, CLA.67, LHG.72, LHG.88
24 PLIP interactions:15 interactions with chain D, 3 interactions with chain K, 3 interactions with chain A, 3 interactions with chain O- Hydrophobic interactions: D:M.199, D:A.202, D:L.209, D:T.217, D:W.253, D:F.261, D:F.261, D:L.267, D:F.270, D:F.273, D:V.274, D:T.277, K:L.23, K:L.29, K:L.30, A:F.52, A:F.52, A:I.77, O:F.10, O:F.10, O:F.10
- Hydrogen bonds: D:H.214, D:F.261
- pi-Stacking: D:F.261
PL9.105: 45 residues within 4Å:- Chain U: L.210, F.211, M.214, H.215, L.218, V.219, Y.246, I.248, A.251, H.252, F.255, I.259, F.260, A.263, S.264, F.265, N.266, L.271, F.274, L.275
- Chain X: W.21, V.28, V.30, G.34, I.35, F.38, P.39, A.41, Y.42, L.45, F.125
- Chain Z: V.18, V.21, A.22, T.25, L.26
- Ligands: CLA.98, PHO.158, CLA.159, CLA.160, LHG.169, SQD.170
- Chain b: V.20, T.24, L.28
22 PLIP interactions:1 interactions with chain b, 6 interactions with chain X, 12 interactions with chain U, 3 interactions with chain Z- Hydrophobic interactions: b:T.24, X:V.30, X:F.38, X:F.38, X:P.39, X:Y.42, X:L.45, U:F.211, U:F.211, U:M.214, U:L.218, U:F.255, U:F.255, U:I.259, U:L.271, U:F.274, Z:V.18, Z:A.22, Z:T.25
- Hydrogen bonds: U:H.215, U:S.264, U:F.265
PL9.162: 48 residues within 4Å:- Chain 4: L.23, V.26, L.27, L.29, L.30
- Chain 8: Y.6, V.7, F.10
- Chain U: F.48, V.49, F.52, I.53, L.71, I.77, G.175, I.176
- Chain X: M.198, M.199, A.202, G.203, G.206, L.209, L.210, I.213, H.214, T.217, V.218, Y.244, M.246, A.249, N.250, W.253, F.257, I.259, A.260, F.261, L.267, F.270, F.273, V.274, T.277, G.278, M.281
- Ligands: PHO.99, CLA.106, CLA.118, LHG.163, LHG.177
20 PLIP interactions:12 interactions with chain X, 3 interactions with chain 4, 3 interactions with chain U, 2 interactions with chain 8- Hydrophobic interactions: X:M.199, X:A.202, X:T.217, X:A.249, X:W.253, X:F.261, X:F.261, X:L.267, X:F.270, X:F.273, 4:L.23, 4:L.27, 4:L.29, U:F.52, U:I.77, U:I.77, 8:F.10, 8:F.10
- Hydrogen bonds: X:H.214, X:F.261
- 13 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.10: 27 residues within 4Å:- Chain A: F.93, P.95, W.97, E.98, F.117, L.120, L.121, S.124, F.155, L.159
- Chain C: L.201, L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269, F.272, I.273
- Chain H: K.5, Y.9
- Ligands: CLA.5, CLA.47, CLA.48, DGD.57
10 PLIP interactions:3 interactions with chain A, 4 interactions with chain C, 3 interactions with chain H- Hydrophobic interactions: A:F.155, C:W.211, C:W.211, C:W.211
- Hydrogen bonds: A:W.97, A:E.98, C:E.209, H:K.5, H:Y.9
- Water bridges: H:Y.9
LMG.60: 19 residues within 4Å:- Chain C: F.58, H.62, Q.72, G.73, L.421
- Chain I: I.22
- Chain J: D.23, V.24, V.27, V.30, L.31
- Chain S: Q.21, I.25
- Ligands: CLA.44, CLA.46, CLA.50, CLA.52, DGD.58, STE.84
5 PLIP interactions:1 interactions with chain J, 1 interactions with chain S, 3 interactions with chain C- Hydrophobic interactions: J:L.31, S:I.25
- Hydrogen bonds: C:H.62
- Salt bridges: C:H.62, C:H.62
LMG.71: 27 residues within 4Å:- Chain D: L.45, W.48, L.49, Y.67, L.68, G.70, C.71, N.72, F.73
- Chain F: V.23, L.26, A.27, T.30, I.37, M.40, Q.41
- Chain I: V.25, F.28, F.29, G.31, A.32, L.36, G.37
- Ligands: CLA.3, DGD.59, CLA.66, BCR.69
15 PLIP interactions:9 interactions with chain D, 3 interactions with chain F, 3 interactions with chain I- Hydrophobic interactions: D:F.73, D:F.73, D:F.73, D:F.73, F:L.26, I:F.29
- Hydrogen bonds: D:Y.67, D:G.70, D:F.73, F:Q.41, F:Q.41, I:L.36
- Water bridges: D:N.72, D:N.72, I:F.28
LMG.73: 16 residues within 4Å:- Chain B: R.224, L.225, A.228
- Chain D: F.15, D.16, D.19, K.23, W.32, L.135
- Chain G: W.25, T.28, M.31, A.32, M.35
- Ligands: CLA.24, LMG.74
8 PLIP interactions:2 interactions with chain B, 4 interactions with chain D, 2 interactions with chain G- Hydrophobic interactions: B:L.225, B:A.228, D:W.32, D:W.32, G:W.25, G:A.32
- Water bridges: D:K.23
- Salt bridges: D:K.23
LMG.74: 18 residues within 4Å:- Chain B: A.228, L.229, R.230, L.474
- Chain D: W.32, S.33, I.35, L.36, L.127, F.130, E.131, R.134
- Chain G: M.35
- Chain R: F.25
- Ligands: CLA.23, CLA.24, CLA.68, LMG.73
4 PLIP interactions:4 interactions with chain D- Hydrophobic interactions: D:L.36, D:L.127, D:E.131
- Water bridges: D:K.23
LMG.89: 30 residues within 4Å:- Chain B: Y.40, F.325, T.327, G.328, P.329, K.332, W.450, F.453, A.454, V.457, F.458, L.461
- Chain D: F.196, I.284
- Chain K: F.35
- Chain L: N.4, L.6, G.7, A.10, L.13, F.14, V.17
- Ligands: CLA.22, CLA.28, CLA.29, BCR.32, BCR.33, LHG.36, STE.40, LHG.88
12 PLIP interactions:5 interactions with chain B, 5 interactions with chain L, 1 interactions with chain D, 1 interactions with chain K- Hydrophobic interactions: B:F.453, B:A.454, B:L.461, L:L.13, L:F.14, L:V.17, D:I.284, K:F.35
- Hydrogen bonds: B:Y.40, B:T.327, L:N.4, L:N.4
LMG.109: 27 residues within 4Å:- Chain 1: K.5, Y.9
- Chain U: F.93, P.95, W.97, E.98, F.117, L.120, L.121, S.124, F.155, L.159
- Chain W: L.201, L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269, F.272, I.273
- Ligands: CLA.100, CLA.142, CLA.143, DGD.152
13 PLIP interactions:6 interactions with chain W, 3 interactions with chain 1, 4 interactions with chain U- Hydrophobic interactions: W:F.206, W:W.211, W:W.211, U:F.117, U:F.155
- Hydrogen bonds: W:E.209, 1:K.5, 1:Y.9, 1:Y.9, U:W.97, U:E.98
- Water bridges: W:S.204, W:S.204
LMG.133: 18 residues within 4Å:- Chain V: F.144, L.148, F.151, A.155, F.156, T.159, L.161, P.180, V.181, A.182, P.183, W.185, I.203, I.207, I.210, I.211, L.214
- Ligands: STE.137
4 PLIP interactions:4 interactions with chain V- Hydrophobic interactions: V:F.144, V:F.156, V:L.161, V:I.207
LMG.155: 13 residues within 4Å:- Chain 3: D.23, V.27, V.30
- Chain W: F.58, H.62, L.421
- Ligands: CLA.139, CLA.141, CLA.145, CLA.147, DGD.153, STE.172
- Chain c: Q.21
4 PLIP interactions:3 interactions with chain W, 1 interactions with chain 3- Hydrophobic interactions: W:L.421, 3:V.27
- Hydrogen bonds: W:H.62
- Salt bridges: W:H.62
LMG.157: 15 residues within 4Å:- Chain W: I.154, I.158, L.161, V.164, M.168, F.169, T.188, N.189, P.190, L.192, I.226, L.230, I.233, I.237
- Ligands: CLA.149
No protein-ligand interaction detected (PLIP)LMG.165: 17 residues within 4Å:- Chain 0: W.25, T.28, M.31, A.32, M.35, G.36
- Chain V: R.224, L.225, A.228
- Chain X: F.15, D.19, K.23, W.32
- Ligands: CLA.120, STE.135, CLA.160, STE.167
8 PLIP interactions:6 interactions with chain X, 1 interactions with chain V, 1 interactions with chain 0- Hydrophobic interactions: X:F.15, X:W.32, X:W.32, V:A.228, 0:W.25
- Hydrogen bonds: X:D.19, X:W.32
- Salt bridges: X:K.23
LMG.166: 27 residues within 4Å:- Chain 2: V.25, F.28, F.29, G.31, A.32, L.36, G.37
- Chain X: L.45, W.48, L.49, Y.67, L.68, G.70, C.71, N.72, F.73
- Chain Z: L.26, A.27, T.30, I.37, M.40, Q.41
- Ligands: CLA.98, DGD.153, DGD.154, CLA.159, BCR.161
11 PLIP interactions:4 interactions with chain Z, 6 interactions with chain X, 1 interactions with chain 2- Hydrophobic interactions: Z:L.26, Z:A.27, X:F.73, X:F.73
- Hydrogen bonds: Z:Q.41, Z:Q.41, X:Y.67, X:G.70, X:F.73, 2:L.36
- Water bridges: X:N.72
LMG.179: 30 residues within 4Å:- Chain 4: F.35
- Chain 5: N.4, L.6, G.7, A.10, L.13, F.14, V.17
- Chain V: Y.40, T.327, G.328, P.329, K.332, W.450, F.453, A.454, V.457, F.458, L.461
- Chain X: F.196, I.284
- Ligands: STE.92, CLA.118, CLA.124, CLA.125, BCR.128, BCR.129, STE.131, LHG.134, LHG.177
15 PLIP interactions:8 interactions with chain V, 2 interactions with chain 4, 1 interactions with chain X, 4 interactions with chain 5- Hydrophobic interactions: V:F.453, V:A.454, V:V.457, 4:F.35, 4:F.35, X:I.284, 5:L.6, 5:A.10
- Hydrogen bonds: V:Y.40, V:T.327, V:K.332, 5:N.4
- Water bridges: V:T.327, V:T.327, 5:N.4
- 10 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.11: 29 residues within 4Å:- Chain A: R.140, W.142, V.145, A.146, F.273, A.276, A.277, V.280, V.281, W.284, F.285
- Chain C: F.21, W.24, A.25, F.424, W.431, R.435
- Chain D: A.216, E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.12, CLA.46, CLA.50, CLA.52, DGD.59
12 PLIP interactions:5 interactions with chain C, 3 interactions with chain A, 4 interactions with chain D- Hydrophobic interactions: C:W.24, C:W.24, C:F.424, A:V.145, A:W.284
- Hydrogen bonds: C:R.435, C:R.435, D:N.220, D:A.229, D:A.229, D:T.231
- Salt bridges: A:R.140
LHG.36: 31 residues within 4Å:- Chain A: S.232, A.233, N.234
- Chain B: W.5, Y.6, R.7, L.461, F.464, W.468, F.479
- Chain D: R.139, Y.141, I.144, W.266, F.269, L.272, F.273, V.276, T.277, W.280, M.281
- Chain K: L.23, I.24, L.27
- Chain L: F.14, P.18
- Ligands: CLA.22, CLA.26, CLA.28, LHG.88, LMG.89
14 PLIP interactions:3 interactions with chain A, 1 interactions with chain K, 2 interactions with chain D, 5 interactions with chain B, 3 interactions with chain L- Hydrogen bonds: A:S.232, A:A.233, A:N.234, D:Y.141, B:Y.6, B:R.7
- Hydrophobic interactions: K:L.23, D:V.276, B:W.5, B:L.461, L:F.14, L:F.14, L:P.18
- Salt bridges: B:R.7
LHG.72: 36 residues within 4Å:- Chain A: L.28, M.37, Y.126, R.129, N.234
- Chain D: I.256, F.257, G.258, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Chain K: N.13, T.15, S.16, Y.18, L.19, L.22, V.26, L.29
- Chain O: F.10, I.13, L.16, F.17, A.20, I.21
- Ligands: CLA.2, PHO.4, SQD.13, CLA.67, PL9.70, LHG.88, BCR.93
17 PLIP interactions:9 interactions with chain D, 6 interactions with chain K, 2 interactions with chain O- Hydrophobic interactions: D:F.257, D:I.259, D:F.261, D:F.270, K:Y.18, K:L.19, K:V.26, O:F.17, O:I.21
- Hydrogen bonds: D:S.262, D:S.262, D:S.262, D:N.263, D:W.266, K:N.13, K:N.13, K:S.16
LHG.76: 28 residues within 4Å:- Chain A: H.252, L.258, I.259, F.260, Q.261, Y.262, A.263, S.264, F.265, N.266, F.274
- Chain D: F.27, V.28, L.37, F.38, F.125, R.128
- Chain E: P.9, F.10, S.11
- Chain F: R.19, A.22, V.23, L.26
- Ligands: CLA.3, PL9.9, SQD.12, PHO.64
11 PLIP interactions:4 interactions with chain E, 2 interactions with chain D, 4 interactions with chain A, 1 interactions with chain F- Hydrophobic interactions: E:F.10, D:F.27, D:F.38, A:F.260, A:Y.262, A:F.265, A:F.265, F:V.23
- Hydrogen bonds: E:F.10, E:S.11, E:S.11
LHG.88: 33 residues within 4Å:- Chain A: S.232, N.234, Y.235
- Chain B: P.4, W.5, Y.6
- Chain D: A.202, W.266, F.269, F.270, F.273
- Chain K: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23, I.24, V.26
- Chain L: V.17, P.18, F.21, L.22
- Ligands: CLA.26, CLA.29, BCR.32, LHG.36, CLA.67, PL9.70, LHG.72, LMG.89
19 PLIP interactions:4 interactions with chain L, 6 interactions with chain K, 3 interactions with chain B, 3 interactions with chain A, 3 interactions with chain D- Hydrophobic interactions: L:P.18, L:F.21, L:F.21, L:L.22, K:I.24, K:V.26, D:F.270, D:F.273, D:F.273
- Hydrogen bonds: K:E.11, K:E.11, K:E.11, K:N.13, B:W.5, B:W.5, B:Y.6, A:S.232, A:S.232, A:N.234
LHG.134: 31 residues within 4Å:- Chain 4: L.23, I.24, L.27
- Chain 5: F.14, P.18
- Chain U: S.232, A.233, N.234
- Chain V: W.5, Y.6, R.7, L.461, F.464, W.468, F.479
- Chain X: R.139, Y.141, I.144, W.266, F.269, L.272, F.273, V.276, T.277, W.280, M.281
- Ligands: CLA.118, CLA.122, CLA.124, LHG.177, LMG.179
16 PLIP interactions:2 interactions with chain U, 1 interactions with chain 4, 5 interactions with chain X, 8 interactions with chain V- Hydrogen bonds: U:S.232, U:A.233, X:R.139, X:Y.141, V:Y.6, V:Y.6
- Hydrophobic interactions: 4:L.23, X:F.273, X:V.276, X:W.280, V:W.5, V:W.5, V:L.461, V:F.464
- Water bridges: V:R.7
- Salt bridges: V:R.7
LHG.163: 36 residues within 4Å:- Chain 4: N.13, T.15, S.16, Y.18, L.19, L.22, V.26, L.29
- Chain 8: F.10, I.13, L.16, F.17, A.20, I.21
- Chain U: L.28, M.37, Y.126, R.129, N.234
- Chain X: I.256, F.257, G.258, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Ligands: CLA.97, PHO.99, CLA.106, SQD.108, PL9.162, LHG.177, BCR.181
18 PLIP interactions:5 interactions with chain 4, 8 interactions with chain X, 5 interactions with chain 8- Hydrophobic interactions: 4:Y.18, 4:L.19, 4:L.22, X:I.259, X:F.261, X:F.270, 8:F.10, 8:F.17, 8:F.17, 8:F.17, 8:A.20
- Hydrogen bonds: 4:N.13, 4:S.16, X:S.262, X:S.262, X:S.262, X:N.263, X:W.266
LHG.164: 28 residues within 4Å:- Chain U: R.140, W.142, V.145, A.146, F.273, A.276, A.277, V.280, V.281, W.284, F.285
- Chain W: F.21, W.24, A.25, F.424, W.431, R.435
- Chain X: A.216, E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.107, CLA.141, CLA.145, CLA.147
13 PLIP interactions:5 interactions with chain X, 4 interactions with chain W, 4 interactions with chain U- Hydrogen bonds: X:N.220, X:A.229, X:A.229, X:T.231, X:T.231, W:R.435, W:R.435
- Hydrophobic interactions: W:F.424, W:W.431, U:F.273, U:F.273, U:V.280
- Salt bridges: U:R.140
LHG.169: 21 residues within 4Å:- Chain 2: L.10
- Chain U: L.258, I.259, F.260, Y.262, A.263
- Chain X: F.27, V.28, L.37, F.38, F.125, R.128
- Chain Y: P.9, F.10, S.11
- Chain Z: A.22, V.23, L.26
- Ligands: CLA.98, PL9.105, PHO.158
5 PLIP interactions:3 interactions with chain Y, 2 interactions with chain U- Hydrophobic interactions: Y:F.10, U:F.260, U:F.260
- Hydrogen bonds: Y:F.10, Y:S.11
LHG.177: 35 residues within 4Å:- Chain 4: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23, I.24, V.26
- Chain 5: V.17, P.18, F.21, L.22
- Chain U: S.232, N.234, Y.235
- Chain V: P.4, W.5, Y.6
- Chain X: A.202, W.266, F.269, F.270, F.273
- Ligands: CLA.106, CLA.122, CLA.124, CLA.125, BCR.128, BCR.129, LHG.134, PL9.162, LHG.163, LMG.179
17 PLIP interactions:2 interactions with chain U, 3 interactions with chain V, 3 interactions with chain X, 3 interactions with chain 5, 6 interactions with chain 4- Hydrogen bonds: U:S.232, U:S.232, V:W.5, V:W.5, V:Y.6, 4:E.11, 4:E.11, 4:E.11, 4:N.13
- Hydrophobic interactions: X:F.270, X:F.273, X:F.273, 5:P.18, 5:F.21, 5:L.22, 4:L.22, 4:L.23
- 8 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.12: 26 residues within 4Å:- Chain A: L.200, G.204, F.265, N.267, S.270, F.273, F.274, A.277, W.278, V.281, G.282, F.285
- Chain C: A.22, W.23, W.24
- Chain D: S.230, F.232, R.233
- Chain I: I.22
- Chain J: L.33, A.34, F.37
- Ligands: LHG.11, CLA.50, LHG.76, BCR.85
15 PLIP interactions:5 interactions with chain C, 6 interactions with chain A, 1 interactions with chain J, 1 interactions with chain I, 2 interactions with chain D- Hydrophobic interactions: C:W.23, C:W.24, A:F.273, A:F.274, A:W.278, A:V.281, J:F.37, I:I.22
- Hydrogen bonds: C:W.24, A:N.267, A:S.270, D:S.230
- Water bridges: C:W.23, C:W.23
- Salt bridges: D:R.233
SQD.13: 22 residues within 4Å:- Chain A: W.20, N.26, R.27, L.28, V.30, I.38, L.41, L.42, T.45
- Chain O: I.14, F.17, F.22
- Chain V: L.106, L.109
- Ligands: PHO.4, DGD.14, CLA.67, LHG.72, BCR.93, CLA.117, CLA.127, BCR.130
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:L.28, A:V.30
- Hydrogen bonds: A:R.27, A:L.28
SQD.37: 26 residues within 4Å:- Chain 4: R.14, L.17, Y.18, L.21, L.25
- Chain 5: Y.26
- Chain 8: F.8, C.12, A.15, L.16, F.19, F.23
- Chain B: R.18, A.28, L.29, G.32, S.104, F.108, W.115
- Chain K: N.4, R.7
- Ligands: CLA.29, BCR.32, BCR.33, STE.180, BCR.181
11 PLIP interactions:4 interactions with chain B, 4 interactions with chain 4, 2 interactions with chain 8, 1 interactions with chain K- Hydrophobic interactions: B:L.29, 4:Y.18, 8:L.16, 8:F.19
- Hydrogen bonds: B:W.115, 4:R.14, 4:R.14
- Water bridges: B:R.18
- Salt bridges: B:R.18, 4:R.14, K:R.7
SQD.79: 17 residues within 4Å:- Chain D: W.21, R.24, R.26
- Chain F: P.14, F.16, T.17, V.18, V.21
- Chain R: V.20, L.23, T.24, V.27, L.28, I.31, D.35
- Ligands: PL9.9, CLA.68
10 PLIP interactions:4 interactions with chain F, 5 interactions with chain D, 1 interactions with chain R- Hydrophobic interactions: F:V.21, R:I.31
- Hydrogen bonds: F:V.18, D:R.24, D:R.24
- Water bridges: F:T.17, F:R.19, D:W.21
- Salt bridges: D:R.24, D:R.26
SQD.87: 26 residues within 4Å:- Chain 4: N.4
- Chain K: R.14, L.17, Y.18, L.21
- Chain L: Y.26
- Chain O: C.12, A.15, L.16, F.19, F.23, R.24, P.26
- Chain V: R.18, M.25, A.28, L.29, G.32, S.104, F.108, W.115
- Ligands: STE.91, BCR.93, CLA.125, BCR.128, BCR.129
11 PLIP interactions:4 interactions with chain V, 4 interactions with chain K, 3 interactions with chain O- Hydrophobic interactions: V:L.29, V:F.108, K:Y.18, O:F.19, O:F.19, O:F.19
- Hydrogen bonds: V:W.115, K:R.14, K:R.14
- Salt bridges: V:R.18, K:R.14
SQD.107: 29 residues within 4Å:- Chain 2: I.22
- Chain 3: L.33, A.34, F.37
- Chain U: L.200, A.203, G.204, F.265, N.267, S.270, F.273, F.274, A.277, W.278, V.281, G.282, F.285
- Chain W: Q.16, A.22, W.23, W.24
- Chain X: S.230, F.232, R.233
- Ligands: CLA.145, DGD.154, LHG.164, BCR.174, STE.176
20 PLIP interactions:2 interactions with chain X, 4 interactions with chain W, 1 interactions with chain 2, 10 interactions with chain U, 3 interactions with chain 3- Hydrogen bonds: X:S.230, W:Q.16, W:W.24, U:N.267, U:S.270, U:S.270
- Salt bridges: X:R.233
- Hydrophobic interactions: W:W.23, 2:I.22, U:L.200, U:A.277, U:W.278, U:W.278, U:W.278, U:V.281, 3:A.34, 3:F.37, 3:F.37
- Water bridges: W:W.23, U:N.267
SQD.108: 18 residues within 4Å:- Chain 8: F.22
- Chain B: L.106, L.109
- Chain U: N.26, R.27, L.28, V.30, I.38, L.41, L.42, T.45
- Ligands: CLA.21, CLA.31, BCR.34, PHO.99, CLA.106, LHG.163, BCR.181
8 PLIP interactions:6 interactions with chain U, 2 interactions with chain B- Hydrophobic interactions: U:L.28, U:I.38, U:I.38, U:L.42, B:L.106, B:L.109
- Hydrogen bonds: U:R.27, U:L.28
SQD.170: 16 residues within 4Å:- Chain 7: A.27
- Chain X: W.21, R.24, R.26
- Chain Z: P.14, F.16, T.17, V.18, V.21
- Ligands: PL9.105
- Chain b: L.23, T.24, V.27, L.28, I.31, D.35
15 PLIP interactions:6 interactions with chain Z, 3 interactions with chain X, 2 interactions with chain Y, 4 interactions with chain b- Hydrophobic interactions: Z:F.16, Z:F.16, Z:V.18, Z:V.21, b:L.23, b:V.27, b:V.27
- Hydrogen bonds: Z:V.18, X:W.21, X:R.24, Y:E.7, b:D.35
- Water bridges: Z:R.19, Y:E.7
- Salt bridges: X:R.26
- 10 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.14: 36 residues within 4Å:- Chain A: L.42, I.46, I.50, P.56, Y.73, S.101, L.102, D.103, L.106
- Chain H: M.1, T.3, L.4, T.7, V.11
- Chain M: K.95, Q.135, G.139
- Chain V: S.74, W.75, S.76, D.87, G.89, F.90, E.94, L.98, V.102, L.106, L.109
- Ligands: CLA.5, BCR.6, SQD.13, STE.83, BCR.93, CLA.117, BCR.129, STE.136
13 PLIP interactions:2 interactions with chain M, 8 interactions with chain A, 2 interactions with chain H, 1 interactions with chain V- Hydrogen bonds: M:K.95, M:Q.135, A:D.103, A:D.103, A:D.103, A:D.103, A:D.103
- Hydrophobic interactions: A:L.42, A:I.50, H:T.3, H:T.7, V:F.90
- Water bridges: A:L.102
DGD.38: 20 residues within 4Å:- Chain 1: M.1, L.4
- Chain 6: K.95
- Chain B: W.75, S.76, D.87, F.90, L.98, V.102
- Chain U: I.46, I.50, I.96, S.101, L.102, D.103, L.106
- Ligands: CLA.21, BCR.33, CLA.100, BCR.101
8 PLIP interactions:5 interactions with chain B, 1 interactions with chain 6, 1 interactions with chain U, 1 interactions with chain 1- Hydrophobic interactions: B:W.75, B:W.75, B:W.75, B:L.98, B:L.98, U:I.50, 1:L.4
- Salt bridges: 6:K.95
DGD.57: 39 residues within 4Å:- Chain A: L.91, M.127, S.148, L.151, A.152, F.155, L.159, I.160, I.163, F.168
- Chain C: W.177, P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, F.272, I.273, C.276, F.280, N.281, N.282, T.283, T.293, D.348, F.349, R.350, F.419, F.423, L.426
- Ligands: LMG.10, CLA.47, CLA.48
20 PLIP interactions:16 interactions with chain C, 4 interactions with chain A- Hydrophobic interactions: C:W.211, C:V.213, C:F.272, A:F.155, A:F.155, A:I.160, A:I.163
- Hydrogen bonds: C:G.208, C:E.209, C:N.282, C:N.282, C:N.282, C:T.283, C:T.283, C:D.348, C:D.348, C:R.350, C:R.350
- Water bridges: C:F.280, C:D.348
DGD.58: 26 residues within 4Å:- Chain A: H.195, F.197, T.292, L.297
- Chain C: Y.70, E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417, V.420
- Chain I: I.22, V.25, F.29, Y.33
- Ligands: CLA.46, CLA.50, DGD.59, LMG.60, STE.84
13 PLIP interactions:2 interactions with chain A, 10 interactions with chain C, 1 interactions with chain I- Hydrophobic interactions: A:F.197, A:L.297, C:W.413, C:W.413, I:F.29
- Hydrogen bonds: C:Q.72, C:Q.72, C:S.394, C:N.406, C:V.408, C:W.413
- Water bridges: C:G.73, C:V.408
DGD.59: 35 residues within 4Å:- Chain A: P.196, F.197, Q.199, L.200, A.203, F.285, F.300, N.301, F.302, S.305
- Chain C: L.392, N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain D: N.72, F.73, L.74
- Chain I: F.29, A.32, Y.33, G.37, S.38, S.39, L.40
- Chain Q: Q.60
- Ligands: CLA.3, LHG.11, CLA.46, CLA.50, DGD.58, LMG.71
20 PLIP interactions:6 interactions with chain A, 2 interactions with chain D, 3 interactions with chain Q, 3 interactions with chain I, 6 interactions with chain C- Hydrophobic interactions: A:P.196, A:P.196, A:L.200, A:L.200, A:F.300, D:L.74, D:L.74
- Hydrogen bonds: A:S.305, Q:Q.60, Q:Q.60, Q:Q.60, I:A.32, I:G.37, I:S.39, C:N.393, C:N.403, C:N.403, C:N.403, C:S.404, C:N.406
DGD.81: 44 residues within 4Å:- Chain B: Y.193, F.246, F.250, V.251, A.253, G.254, T.255, W.257, Y.258, Y.273, Q.274, S.277, Y.279, T.452, A.456, L.460, F.463
- Chain D: G.86, H.87, L.89, L.116, A.119, F.120, I.123, I.150, V.154, L.158, I.159, L.162, G.163, S.165, W.167, A.290, L.291
- Chain E: R.69
- Chain G: L.46, Y.49, N.50, V.60, S.61, W.62
- Ligands: CLA.17, CLA.23, CLA.24
25 PLIP interactions:10 interactions with chain D, 5 interactions with chain B, 8 interactions with chain G, 2 interactions with chain E- Hydrophobic interactions: D:L.116, D:F.120, D:I.123, D:V.154, D:I.159, D:L.162, D:L.291, B:Y.258, B:T.452, B:F.463, G:Y.49, G:Y.49, G:Y.49
- Hydrogen bonds: D:H.87, D:H.87, B:S.277, G:N.50, G:V.60, G:S.61, G:W.62, G:W.62
- Salt bridges: D:H.87
- Water bridges: B:T.271, E:R.69, E:R.69
DGD.152: 37 residues within 4Å:- Chain U: L.91, M.127, L.151, A.152, F.155, L.159, I.160, I.163, F.168
- Chain W: W.177, P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, F.272, I.273, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, G.351, F.419, F.423, L.426
- Ligands: LMG.109, CLA.142
21 PLIP interactions:5 interactions with chain U, 16 interactions with chain W- Hydrophobic interactions: U:L.151, U:A.152, U:F.155, U:I.160, U:I.163, W:P.205, W:F.206, W:W.211, W:F.272
- Hydrogen bonds: W:G.208, W:N.282, W:N.282, W:N.282, W:T.283, W:T.283, W:D.348, W:D.348, W:R.350, W:R.350
- Water bridges: W:N.216, W:F.280
DGD.153: 27 residues within 4Å:- Chain 2: V.25, F.29, Y.33
- Chain U: H.195, F.197, T.292, L.297
- Chain W: K.67, E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417, V.420
- Ligands: CLA.141, CLA.145, DGD.154, LMG.155, BCR.161, LMG.166, STE.172
11 PLIP interactions:1 interactions with chain U, 9 interactions with chain W, 1 interactions with chain 2- Hydrophobic interactions: U:F.197, W:L.392, W:W.413, 2:F.29
- Hydrogen bonds: W:Q.72, W:S.394, W:N.406, W:V.408, W:W.413
- Water bridges: W:G.73, W:G.73
DGD.154: 35 residues within 4Å:- Chain 2: F.29, A.32, Y.33, G.37, S.38, S.39, L.40
- Chain U: P.196, F.197, Q.199, L.200, A.203, F.285, F.300, N.301, F.302, S.305
- Chain W: L.392, N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain X: N.72, F.73, L.74
- Ligands: CLA.98, SQD.107, CLA.141, CLA.145, DGD.153, LMG.166
- Chain a: Q.60
17 PLIP interactions:6 interactions with chain W, 6 interactions with chain U, 1 interactions with chain a, 1 interactions with chain X, 3 interactions with chain 2- Hydrogen bonds: W:N.393, W:N.403, W:N.403, W:N.403, W:S.404, W:S.404, U:S.305, a:Q.60, 2:A.32, 2:G.37
- Hydrophobic interactions: U:P.196, U:Q.199, U:L.200, U:A.203, U:F.300, X:L.74, 2:F.29
DGD.171: 44 residues within 4Å:- Chain 0: L.46, Y.49, N.50, V.60, S.61, W.62
- Chain V: Y.193, F.246, F.250, V.251, A.253, G.254, T.255, W.257, Y.258, Y.273, Q.274, S.277, Y.279, T.452, A.456, F.463
- Chain X: G.86, H.87, L.89, L.116, A.119, F.120, I.123, I.150, V.154, L.158, I.159, L.162, G.163, S.165, W.167, V.287, A.290, L.291
- Chain Y: R.69
- Ligands: CLA.113, CLA.119, CLA.120
24 PLIP interactions:7 interactions with chain V, 8 interactions with chain X, 8 interactions with chain 0, 1 interactions with chain Y- Hydrophobic interactions: V:A.253, V:Y.258, V:F.463, X:L.116, X:F.120, X:I.123, X:I.159, X:L.162, 0:Y.49, 0:Y.49, 0:Y.49
- Hydrogen bonds: V:S.277, V:S.277, X:H.87, X:H.87, 0:N.50, 0:V.60, 0:S.61, 0:S.61, 0:W.62
- Water bridges: V:Y.193, V:T.271, X:G.86, Y:R.69
- 2 x OEX: CA-MN4-O5 CLUSTER(Covalent)
OEX.15: 12 residues within 4Å:- Chain A: D.61, S.169, D.170, V.185, E.189, H.332, E.333, H.337, D.342, A.344
- Chain C: E.342, R.345
20 PLIP interactions:12 interactions with chain A, 4 interactions with chain C, 4 Ligand-Water interactions- Hydrogen bonds: A:H.337, C:R.345, C:R.345
- Metal complexes: A:D.170, A:D.170, A:E.189, A:E.189, A:H.332, A:E.333, A:E.333, A:E.333, A:D.342, A:D.342, A:A.344, C:E.342, C:E.342, H2O.1, H2O.1, H2O.2, H2O.4
OEX.111: 12 residues within 4Å:- Chain U: D.61, S.169, D.170, V.185, E.189, H.332, E.333, H.337, D.342, A.344
- Chain W: E.342, R.345
21 PLIP interactions:5 interactions with chain W, 12 interactions with chain U, 4 Ligand-Water interactions- Hydrogen bonds: W:R.345, W:R.345, U:H.337
- Metal complexes: W:E.342, W:E.342, W:E.342, U:D.170, U:D.170, U:E.189, U:E.189, U:H.332, U:E.333, U:E.333, U:E.333, U:D.342, U:D.342, U:A.344, H2O.33, H2O.33, H2O.34, H2O.36
- 31 x STE: STEARIC ACID(Non-covalent)
STE.35: 7 residues within 4Å:- Chain B: W.91, L.149
- Ligands: CLA.19, CLA.20, CLA.21, CLA.30, BCR.34
Ligand excluded by PLIPSTE.39: 5 residues within 4Å:- Chain B: P.183, E.184, W.185, G.186
- Ligands: CLA.16
Ligand excluded by PLIPSTE.40: 16 residues within 4Å:- Chain 5: L.8, T.11, A.12, L.16
- Chain 8: M.1, I.4, T.5, F.8
- Chain B: Y.40
- Chain L: L.6, I.9
- Ligands: CLA.22, CLA.29, BCR.32, LMG.89, BCR.181
Ligand excluded by PLIPSTE.41: 7 residues within 4Å:- Chain B: L.148, I.207, I.210, I.211, L.214, L.218
- Ligands: STE.42
Ligand excluded by PLIPSTE.42: 7 residues within 4Å:- Chain B: I.211, L.214, F.215, L.218, V.219
- Ligands: STE.41, STE.82
Ligand excluded by PLIPSTE.61: 3 residues within 4Å:- Chain C: L.192, I.226, L.230
Ligand excluded by PLIPSTE.62: 13 residues within 4Å:- Chain C: V.49, W.85, F.97, P.98, V.101, V.102, V.105, H.106, S.109
- Chain T: F.59
- Ligands: CLA.45, CLA.55, BCR.95
Ligand excluded by PLIPSTE.63: 4 residues within 4Å:- Chain C: L.192, D.193, P.194, W.227
Ligand excluded by PLIPSTE.75: 12 residues within 4Å:- Chain D: L.92, W.93, Q.98, G.99
- Chain R: G.9, I.12, S.16, G.17, V.20, L.21
- Ligands: CLA.23, CLA.68
Ligand excluded by PLIPSTE.77: 8 residues within 4Å:- Chain E: F.37, L.42, D.45, V.46
- Chain N: D.2, V.5, V.8, L.9
Ligand excluded by PLIPSTE.82: 10 residues within 4Å:- Chain B: V.208, I.211
- Chain G: L.30, F.34, L.37
- Ligands: CLA.16, CLA.17, CLA.24, STE.42, BCR.80
Ligand excluded by PLIPSTE.83: 8 residues within 4Å:- Chain A: I.96, L.102
- Chain H: M.1, L.4
- Ligands: CLA.5, BCR.6, DGD.14, CLA.117
Ligand excluded by PLIPSTE.84: 7 residues within 4Å:- Chain I: I.22, G.26, F.29, Y.30, Y.33
- Ligands: DGD.58, LMG.60
Ligand excluded by PLIPSTE.90: 13 residues within 4Å:- Chain 5: L.16, V.20, I.23, V.27
- Chain K: V.10
- Chain L: V.17, V.20, F.21, I.24, L.25, Q.28
- Ligands: CLA.29, STE.180
Ligand excluded by PLIPSTE.91: 6 residues within 4Å:- Chain L: I.23, Y.26, V.27
- Ligands: SQD.87, CLA.125, STE.178
Ligand excluded by PLIPSTE.92: 15 residues within 4Å:- Chain 5: L.6
- Chain L: Q.5, L.8, A.12
- Chain O: M.1, I.4, T.5, F.8
- Chain V: Y.40
- Ligands: BCR.93, CLA.118, CLA.125, BCR.128, STE.131, LMG.179
Ligand excluded by PLIPSTE.110: 4 residues within 4Å:- Chain U: R.16, F.17, W.20
- Ligands: BCR.101
Ligand excluded by PLIPSTE.131: 16 residues within 4Å:- Chain A: L.72
- Chain O: M.1, T.3, I.4, V.7, F.8
- Chain V: S.36, L.39, Y.40, A.43, T.44
- Ligands: STE.92, BCR.93, BCR.129, STE.136, LMG.179
Ligand excluded by PLIPSTE.132: 9 residues within 4Å:- Chain V: G.89, F.90, W.91, L.149, F.162
- Ligands: CLA.115, CLA.116, CLA.117, BCR.130
Ligand excluded by PLIPSTE.135: 11 residues within 4Å:- Chain 0: M.35
- Chain V: A.228, L.229, R.230, L.474
- Chain X: K.23, R.134
- Ligands: CLA.119, CLA.120, LMG.165, STE.167
Ligand excluded by PLIPSTE.136: 17 residues within 4Å:- Chain A: V.49, I.53, A.54, L.72
- Chain O: V.7, F.10, A.11, I.14
- Chain V: L.39, L.42, A.43, E.94, I.101
- Ligands: DGD.14, BCR.93, BCR.129, STE.131
Ligand excluded by PLIPSTE.137: 6 residues within 4Å:- Chain V: I.211, L.214, F.215, L.218, V.219
- Ligands: LMG.133
Ligand excluded by PLIPSTE.156: 14 residues within 4Å:- Chain W: V.49, W.85, F.97, P.98, V.101, V.102, V.105, H.106, S.109, L.113
- Ligands: CLA.139, CLA.140, CLA.150, BCR.173
Ligand excluded by PLIPSTE.167: 15 residues within 4Å:- Chain V: L.474
- Chain X: W.32, S.33, I.35, L.36, L.127, F.130, E.131, R.134
- Ligands: CLA.119, STE.135, CLA.160, LMG.165
- Chain b: L.21, F.25
Ligand excluded by PLIPSTE.172: 8 residues within 4Å:- Chain 2: I.22, V.25, G.26, F.29, Y.30, Y.33
- Ligands: DGD.153, LMG.155
Ligand excluded by PLIPSTE.176: 5 residues within 4Å:- Chain 3: F.37, F.45
- Chain W: W.23
- Ligands: SQD.107, BCR.174
Ligand excluded by PLIPSTE.178: 17 residues within 4Å:- Chain 4: R.7, P.9, V.10
- Chain 5: V.17, V.20, F.21, I.24, L.25, Q.28
- Chain L: L.16, V.20, I.23, V.27, E.30, S.31
- Ligands: STE.91, CLA.125
Ligand excluded by PLIPSTE.180: 8 residues within 4Å:- Chain 5: I.23, Y.26, V.27
- Chain K: R.7
- Chain L: I.24
- Ligands: CLA.29, SQD.37, STE.90
Ligand excluded by PLIPSTE.182: 14 residues within 4Å:- Chain 8: M.1, T.3, I.4, V.7, F.8
- Chain B: S.36, L.39, Y.40, A.43, T.44
- Chain U: L.72
- Ligands: BCR.33, BCR.181, STE.183
Ligand excluded by PLIPSTE.183: 12 residues within 4Å:- Chain 8: V.7, F.10, A.11, I.14
- Chain B: L.39, I.101
- Chain U: V.49, I.50, I.53, A.54
- Ligands: BCR.33, STE.182
Ligand excluded by PLIPSTE.186: 14 residues within 4Å:- Chain X: L.92, W.93, Q.98, G.99
- Ligands: CLA.160
- Chain b: P.5, K.8, G.9, I.12, G.13, S.16, G.17, V.20, L.21
Ligand excluded by PLIP- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.65: 11 residues within 4Å:- Chain A: H.215, V.219, E.244, Y.246, H.272
- Chain D: H.214, V.218, Y.244, K.264, H.268
- Ligands: FE2.1
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain D- Hydrogen bonds: A:H.215, D:Y.244, D:Y.244
BCT.104: 12 residues within 4Å:- Chain U: H.215, V.219, E.244, Y.246, S.268, H.272
- Chain X: H.214, V.218, Y.244, K.264, H.268
- Ligands: FE2.96
3 PLIP interactions:1 interactions with chain X, 2 interactions with chain U- Hydrogen bonds: X:H.214, U:Y.246, U:Y.246
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.78: 26 residues within 4Å:- Chain E: R.8, F.10, I.13, I.14, S.16, R.18, Y.19, I.22, H.23, T.26, I.27, L.30
- Chain F: I.15, F.16, R.19, W.20, V.23, H.24, A.27, V.28, I.31
- Chain N: V.12, A.15, A.16, A.19, I.23
24 PLIP interactions:9 interactions with chain E, 13 interactions with chain F, 2 interactions with chain N,- Hydrophobic interactions: E:I.13, E:Y.19, E:T.26, E:I.27, F:I.15, F:W.20, F:V.23, F:A.27, F:V.28, F:I.31, N:A.19, N:I.23
- Water bridges: E:R.18, F:R.19, F:R.19
- Salt bridges: E:R.8, E:R.18, F:R.19
- pi-Stacking: E:Y.19, F:W.20, F:W.20, F:H.24
- Metal complexes: E:H.23, F:H.24
HEM.168: 26 residues within 4Å:- Chain 7: V.12, A.15, A.16, A.19, I.23
- Chain Y: R.8, F.10, I.13, I.14, S.16, R.18, Y.19, I.22, H.23, T.26, I.27, L.30
- Chain Z: I.15, F.16, R.19, W.20, V.23, H.24, A.27, V.28, I.31
19 PLIP interactions:10 interactions with chain Z, 7 interactions with chain Y, 2 interactions with chain 7,- Hydrophobic interactions: Z:I.15, Z:W.20, Z:V.23, Z:A.27, Z:V.28, Y:I.13, Y:T.26, 7:A.19, 7:I.23
- Salt bridges: Z:R.19, Y:R.8, Y:R.18
- pi-Stacking: Z:W.20, Z:W.20, Z:H.24, Y:Y.19
- Metal complexes: Z:H.24, Y:H.23
- pi-Cation interactions: Y:H.23
- 2 x HEC: HEME C(Covalent)
HEC.94: 29 residues within 4Å:- Chain C: A.381
- Chain Q: F.59, A.62, C.63, S.65, C.66, H.67, T.72, T.74, N.75, L.78, D.79, L.80, T.84, L.85, A.88, R.92, L.98, Y.101, M.102, T.107, Y.108, I.114, H.118, P.119, F.127, M.130, I.141, I.145
16 PLIP interactions:16 interactions with chain Q,- Hydrophobic interactions: Q:T.72, Q:L.78, Q:L.80, Q:L.98, Q:Y.101, Q:Y.101, Q:I.114, Q:P.119, Q:I.141, Q:I.145
- Hydrogen bonds: Q:D.79
- Water bridges: Q:N.75, Q:Y.108
- pi-Stacking: Q:Y.101
- Metal complexes: Q:H.67, Q:H.118
HEC.184: 29 residues within 4Å:- Chain W: A.381
- Chain a: F.59, A.62, C.63, S.65, C.66, H.67, T.72, T.74, N.75, L.78, D.79, L.80, T.84, L.85, A.88, R.92, L.98, Y.101, M.102, T.107, Y.108, I.114, H.118, P.119, M.130, L.133, I.141, I.145
14 PLIP interactions:14 interactions with chain a,- Hydrophobic interactions: a:T.72, a:L.80, a:L.98, a:Y.101, a:I.114, a:P.119, a:I.141, a:I.145
- Hydrogen bonds: a:D.79
- Water bridges: a:N.75, a:Y.108
- pi-Stacking: a:Y.101
- Metal complexes: a:H.67, a:H.118
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hussein, R. et al., Structural dynamics in the water and proton channels of photosystem II during the S 2 to S 3 transition. Nat Commun (2021)
- Release Date
- 2021-11-10
- Peptides
- Photosystem II protein D1 1: AU
Photosystem II CP47 reaction center protein: BV
Photosystem II CP43 reaction center protein: CW
Photosystem II D2 protein: DX
Cytochrome b559 subunit alpha: EY
Cytochrome b559 subunit beta: FZ
Photosystem II reaction center protein H: G0
Photosystem II reaction center protein I: H1
Photosystem II reaction center protein J: I2
Photosystem II reaction center protein K: J3
Photosystem II reaction center protein L: K4
Photosystem II reaction center protein M: L5
Photosystem II manganese-stabilizing polypeptide: M6
Photosystem II protein Y: N7
Photosystem II reaction center protein T: O8
Photosystem II 12 kDa extrinsic protein: P9
Cytochrome c-550: Qa
Photosystem II reaction center X protein: Rb
Photosystem II reaction center protein Ycf12: Sc
Photosystem II reaction center protein Z: Td - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AU
aB
BV
bC
CW
cD
DX
dE
EY
eF
FZ
fG
H0
hH
I1
iI
J2
jJ
K3
kK
L4
lL
M5
mM
O6
oN
R7
rO
T8
tP
U9
uQ
Va
vR
Xb
xS
Yc
yT
Zd
z - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 7rf3.1
RT XFEL structure of the one-flash state of Photosystem II (1F, S2-rich) at 2.26 Angstrom resolution
Photosystem II protein D1 1
Toggle Identical (AU)Photosystem II CP47 reaction center protein
Toggle Identical (BV)Photosystem II CP43 reaction center protein
Photosystem II D2 protein
Toggle Identical (DX)Cytochrome b559 subunit alpha
Toggle Identical (EY)Cytochrome b559 subunit beta
Toggle Identical (FZ)Photosystem II reaction center protein H
Photosystem II reaction center protein I
Toggle Identical (H1)Photosystem II reaction center protein J
Toggle Identical (I2)Photosystem II reaction center protein K
Toggle Identical (J3)Photosystem II reaction center protein L
Photosystem II reaction center protein M
Photosystem II manganese-stabilizing polypeptide
Toggle Identical (M6)Photosystem II protein Y
Toggle Identical (N7)Photosystem II reaction center protein T
Toggle Identical (O8)Photosystem II 12 kDa extrinsic protein
Toggle Identical (P9)Cytochrome c-550
Toggle Identical (Qa)Photosystem II reaction center X protein
Photosystem II reaction center protein Ycf12
Photosystem II reaction center protein Z
Toggle Identical (Td)Related Entries With Identical Sequence
1izl.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1 more...less...5e79.1 | 5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kaf.1 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1 | 9evx.1