- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-1-mer
- Ligands
- 2 x FE2: FE (II) ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 4 residues within 4Å:- Chain A: N.181, H.332, E.333
- Chain D: K.307
Ligand excluded by PLIPCL.3: 5 residues within 4Å:- Chain A: H.337, N.338, F.339
- Chain C: G.335, E.336
Ligand excluded by PLIPCL.111: 4 residues within 4Å:- Chain U: N.181, H.332, E.333
- Chain X: K.307
Ligand excluded by PLIPCL.112: 5 residues within 4Å:- Chain U: H.337, N.338, F.339
- Chain W: G.335, E.336
Ligand excluded by PLIP- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.4: 28 residues within 4Å:- Chain A: F.119, Y.147, P.150, S.153, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, A.286, A.287, I.290
- Chain D: L.172, L.195
- Chain N: F.17
- Ligands: CLA.5, CLA.6, PHO.7, CLA.75, LHG.79
18 PLIP interactions:15 interactions with chain A, 2 interactions with chain D, 1 interactions with chain N,- Hydrophobic interactions: A:F.119, A:P.150, A:F.182, A:F.186, A:Q.187, A:I.192, A:I.192, A:L.193, A:L.193, A:V.205, A:F.206, A:F.206, A:I.290, D:L.172, D:L.195, N:F.17
- Water bridges: A:I.290
- Metal complexes: A:H.198
CLA.5: 19 residues within 4Å:- Chain A: V.157, F.158, M.172, I.176, T.179, F.180, M.183
- Chain D: M.188, V.191, A.192, L.195, G.196
- Ligands: CLA.4, PHO.7, SQD.11, CLA.75, PL9.78, LHG.79, LHG.96
5 PLIP interactions:3 interactions with chain A, 1 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: A:V.157, A:F.158, A:F.180, D:V.191
- Metal complexes: H2O.5
CLA.6: 21 residues within 4Å:- Chain A: Q.199, V.202, A.203, F.206, G.207, L.210, F.260, W.278
- Chain D: F.147, V.165, I.168, F.169, F.171, L.172
- Ligands: CLA.4, PL9.13, DGD.63, PHO.72, CLA.75, LMG.84, LHG.86
14 PLIP interactions:7 interactions with chain D, 6 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: D:F.147, D:F.147, D:I.168, D:F.169, D:F.171, D:L.172, D:L.172, A:V.202, A:F.206, A:L.210, A:F.260, A:W.278
- pi-Stacking: A:F.206
- Metal complexes: H2O.6
CLA.8: 25 residues within 4Å:- Chain A: I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, Q.113, L.114, F.117, H.118, L.121
- Chain H: V.8, Y.9, V.11, V.12, T.13, F.15, V.20
- Ligands: BCR.9, LMG.15, CLA.50, CLA.51, DGD.61
22 PLIP interactions:8 interactions with chain H, 14 interactions with chain A,- Hydrophobic interactions: H:V.8, H:Y.9, H:V.11, H:V.12, H:V.12, H:F.15, H:F.15, H:V.20, A:I.36, A:P.39, A:T.40, A:F.93, A:P.95, A:I.96, A:W.97, A:W.97, A:L.114, A:F.117, A:L.121
- Hydrogen bonds: A:I.96
- Salt bridges: A:H.118
- Metal complexes: A:H.118
CLA.17: 8 residues within 4Å:- Chain B: W.184, G.185, P.186, F.189
- Chain G: F.40, L.54
- Ligands: CLA.18, BCR.90
7 PLIP interactions:3 interactions with chain G, 3 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: G:F.40, G:F.40, G:L.54, B:P.186, B:F.189, B:F.189
- Metal complexes: H2O.11
CLA.18: 24 residues within 4Å:- Chain B: G.188, F.189, P.191, G.196, A.199, H.200, A.203, A.204, V.207, F.246, F.249, V.250
- Chain D: V.144, L.148
- Chain G: F.37, F.40, I.44, L.45, Y.48
- Ligands: CLA.17, CLA.19, CLA.21, CLA.24, DGD.91
17 PLIP interactions:11 interactions with chain B, 2 interactions with chain D, 4 interactions with chain G,- Hydrophobic interactions: B:F.189, B:F.189, B:F.189, B:A.199, B:H.200, B:V.207, B:F.246, B:F.246, B:F.249, B:F.249, D:V.144, D:L.148, G:F.37, G:F.40, G:I.44, G:I.44
- Metal complexes: B:H.200
CLA.19: 22 residues within 4Å:- Chain B: R.67, L.68, A.145, L.148, C.149, F.152, M.165, V.197, H.200, H.201, F.246, A.247, V.251, T.261
- Ligands: CLA.18, CLA.20, CLA.21, CLA.22, CLA.24, CLA.25, CLA.26, BCR.90
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:L.68, B:L.148, B:F.152, B:F.152, B:F.152, B:F.246, B:F.246, B:A.247, B:V.251
- Hydrogen bonds: B:R.67
- Salt bridges: B:R.67
- pi-Cation interactions: B:H.200
- Metal complexes: B:H.201
CLA.20: 24 residues within 4Å:- Chain B: W.32, F.60, F.64, R.67, L.148, V.244, A.247, A.248, V.251, F.450, H.454, F.457, F.461
- Ligands: CLA.19, CLA.21, CLA.22, CLA.23, CLA.27, CLA.28, CLA.29, CLA.31, CLA.32, BCR.34, UNL.41
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:W.32, B:F.60, B:F.64, B:L.148, B:V.244, B:A.247, B:V.251, B:F.457, B:F.457, B:F.461, B:F.461
- Salt bridges: B:R.67
- Metal complexes: B:H.454
CLA.21: 26 residues within 4Å:- Chain B: T.26, V.29, A.30, W.32, A.33, A.37, V.61, F.64, M.65, R.67, L.68, V.95, H.99, L.102, C.149, A.204
- Ligands: CLA.18, CLA.19, CLA.20, CLA.22, CLA.25, CLA.26, CLA.28, CLA.31, BCR.35, UNL.41
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:T.26, B:V.29, B:A.30, B:W.32, B:A.33, B:L.68, B:V.95, B:L.102
- Water bridges: B:R.67
- Salt bridges: B:R.67
- Metal complexes: B:H.99
CLA.22: 25 residues within 4Å:- Chain B: L.68, G.69, V.70, W.90, V.95, A.98, H.99, V.101, L.102, L.105, L.148, G.151, F.152, F.155, H.156, F.161, G.162, P.163
- Ligands: CLA.19, CLA.20, CLA.21, CLA.32, BCR.35, UNL.41, SQD.120
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:L.68, B:V.70, B:W.90, B:A.98, B:V.101, B:L.102, B:L.105, B:L.148, B:F.152, B:F.155, B:F.161, B:F.161
- pi-Stacking: B:F.152
- Metal complexes: B:H.156
CLA.23: 27 residues within 4Å:- Chain B: W.32, M.36, Y.39, Q.57, G.58, M.59, F.60, L.323, F.324, T.326, G.327, P.328, W.449, F.450, A.453, H.454
- Chain D: F.186, M.271
- Chain L: F.14
- Ligands: LHG.16, CLA.20, CLA.29, BCR.33, BCR.34, PL9.78, LMG.98, BCR.211
13 PLIP interactions:10 interactions with chain B, 1 interactions with chain D, 1 interactions with chain L, 1 Ligand-Water interactions,- Hydrophobic interactions: B:Y.39, B:F.60, B:F.60, B:F.60, B:F.60, B:F.324, B:W.449, D:F.186, L:F.14
- Hydrogen bonds: B:Y.39, B:G.327
- pi-Stacking: B:F.60
- Metal complexes: H2O.13
CLA.24: 28 residues within 4Å:- Chain B: L.228, T.235, S.238, S.239, A.242, F.245, F.246, F.462, H.465, I.466, G.469, T.472, L.473
- Chain D: L.79, F.110, I.113, M.116, L.117, F.120, I.140
- Chain G: L.42
- Ligands: CLA.18, CLA.19, CLA.25, CLA.26, CLA.76, UNL.82, DGD.91
18 PLIP interactions:7 interactions with chain D, 11 interactions with chain B,- Hydrophobic interactions: D:L.79, D:F.110, D:F.110, D:I.113, D:M.116, D:L.117, D:I.140, B:A.242, B:F.245, B:F.245, B:F.246, B:F.462, B:F.462, B:I.466, B:L.473
- Hydrogen bonds: B:S.238
- Water bridges: B:S.239
- Metal complexes: B:H.465
CLA.25: 25 residues within 4Å:- Chain B: F.138, V.207, A.211, F.214, H.215, V.218, R.219, P.220, P.221, L.224, L.228
- Chain D: F.110
- Chain G: T.26, T.27, M.30, F.33, L.38, L.41, L.42
- Ligands: CLA.19, CLA.21, CLA.24, CLA.26, UNL.82, BCR.90
17 PLIP interactions:1 interactions with chain D, 10 interactions with chain B, 6 interactions with chain G,- Hydrophobic interactions: D:F.110, B:F.138, B:F.138, B:V.207, B:A.211, B:F.214, B:F.214, B:L.224, B:L.228, G:M.30, G:F.33, G:L.38, G:L.41, G:L.42
- Salt bridges: B:H.215
- Metal complexes: B:H.215
- Hydrogen bonds: G:T.26
CLA.26: 21 residues within 4Å:- Chain B: H.22, L.134, M.137, F.138, H.141, L.142, A.145, L.228, M.230, I.233, T.235, V.236, S.239, S.240, A.243
- Ligands: CLA.19, CLA.21, CLA.24, CLA.25, CLA.28, CLA.31
10 PLIP interactions:9 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:L.134, B:M.137, B:F.138, B:L.228, B:M.230, B:I.233, B:T.235, B:V.236, B:A.243
- Metal complexes: H2O.7
CLA.27: 23 residues within 4Å:- Chain B: W.4, Y.5, R.6, V.7, H.8, T.9, L.237, I.241, F.457, L.460, F.461, F.463, G.464, W.467, H.468, R.471, F.478
- Ligands: LHG.16, CLA.20, CLA.28, CLA.29, CLA.30, LHG.96
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:W.4, B:W.4, B:H.8, B:T.9, B:L.237, B:L.237, B:I.241, B:F.457, B:F.461, B:F.463
- Hydrogen bonds: B:H.8
- Salt bridges: B:H.8, B:R.471
- pi-Stacking: B:W.467
- Metal complexes: B:H.468
CLA.28: 20 residues within 4Å:- Chain B: H.8, L.11, I.12, L.18, H.22, H.25, T.26, I.233, V.236, L.237, S.240, I.241, V.244
- Ligands: CLA.20, CLA.21, CLA.26, CLA.27, CLA.29, CLA.30, CLA.31
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:L.11, B:I.12, B:L.18, B:H.22, B:H.25, B:T.26, B:I.233, B:I.233, B:V.236, B:L.237, B:L.237, B:V.244
- Hydrogen bonds: B:S.240
- Salt bridges: B:H.22
- Metal complexes: B:H.22
CLA.29: 15 residues within 4Å:- Chain B: H.8, H.25, V.29, W.32, F.461
- Chain L: F.14
- Ligands: LHG.16, CLA.20, CLA.23, CLA.27, CLA.28, CLA.30, BCR.33, BCR.34, LMG.98
10 PLIP interactions:9 interactions with chain B, 1 interactions with chain L,- Hydrophobic interactions: B:V.29, B:V.29, B:W.32, B:W.32, B:F.461, B:F.461, B:F.461, L:F.14
- Salt bridges: B:H.8
- Metal complexes: B:H.25
CLA.30: 23 residues within 4Å:- Chain 7: F.8
- Chain B: V.7, H.8, V.10, L.11, A.21, M.24, L.28, W.114
- Chain K: Q.8, V.10
- Chain L: F.21, L.25
- Ligands: CLA.27, CLA.28, CLA.29, BCR.33, SQD.36, LHG.96, LMG.98, UNL.207, LMT.208, BCR.211
10 PLIP interactions:2 interactions with chain L, 7 interactions with chain B, 1 interactions with chain 7,- Hydrophobic interactions: L:F.21, L:L.25, B:V.7, B:V.7, B:L.11, B:M.24, B:L.28, B:W.114, 7:F.8
- Metal complexes: B:H.8
CLA.31: 18 residues within 4Å:- Chain B: I.19, H.22, L.23, T.26, L.132, M.137, I.140, H.141, L.144
- Chain G: L.6, L.10, L.13, N.14
- Ligands: CLA.20, CLA.21, CLA.26, CLA.28, CLA.32
9 PLIP interactions:5 interactions with chain B, 4 interactions with chain G,- Hydrophobic interactions: B:I.19, B:L.132, B:L.144, G:L.6, G:L.10, G:L.13, G:L.13
- Hydrogen bonds: B:H.22
- Metal complexes: B:H.141
CLA.32: 16 residues within 4Å:- Chain B: I.19, L.23, A.109, W.112, H.113, L.119, L.121
- Chain G: T.4, L.6, G.7, L.10
- Ligands: CLA.20, CLA.22, CLA.31, BCR.35, UNL.41
11 PLIP interactions:8 interactions with chain B, 3 interactions with chain G,- Hydrophobic interactions: B:I.19, B:L.23, B:W.112, B:W.112, B:L.119, B:L.121, G:L.6, G:L.10
- pi-Stacking: B:W.112
- Metal complexes: B:H.113
- Hydrogen bonds: G:T.4
CLA.46: 22 residues within 4Å:- Chain C: T.76, L.77, L.150, G.153, A.154, L.157, I.206, V.215, H.219, I.222, A.260, M.264, I.267, A.268, F.271, V.278, Y.279
- Ligands: CLA.47, CLA.48, CLA.51, CLA.52, BCR.60
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:A.154, C:L.157, C:I.206, C:I.222, C:I.222, C:I.222, C:A.260, C:M.264, C:I.267, C:F.271, C:V.278, C:V.278
- Metal complexes: C:H.219
CLA.47: 26 residues within 4Å:- Chain C: W.45, I.69, L.70, H.73, L.77, L.156, K.160, F.164, L.261, M.264, G.265, A.268, V.272, Y.279, L.408, H.412, L.415, A.416, F.419
- Ligands: CLA.46, CLA.48, CLA.49, CLA.55, CLA.57, LMG.64, HTG.66
17 PLIP interactions:17 interactions with chain C,- Hydrophobic interactions: C:W.45, C:W.45, C:I.69, C:L.70, C:L.77, C:L.156, C:F.164, C:L.261, C:M.264, C:A.268, C:L.408, C:L.415, C:F.419
- Hydrogen bonds: C:Y.279
- Salt bridges: C:H.73, C:H.412
- Metal complexes: C:H.412
CLA.48: 18 residues within 4Å:- Chain C: I.42, V.43, W.45, A.46, T.50, L.70, H.73, I.74, V.96, H.100
- Ligands: CLA.46, CLA.47, CLA.52, CLA.54, CLA.55, CLA.57, CLA.58, LMG.65
5 PLIP interactions:5 interactions with chain C,- Hydrophobic interactions: C:V.43, C:A.46, C:V.96
- Salt bridges: C:H.73
- Metal complexes: C:H.100
CLA.49: 20 residues within 4Å:- Chain C: W.45, M.49, F.52, Q.66, G.67, I.69, W.407, L.408, S.411, H.412, F.418
- Chain J: P.17, V.21
- Ligands: CLA.47, CLA.53, CLA.55, DGD.62, DGD.63, LMG.64, LHG.80
11 PLIP interactions:9 interactions with chain C, 1 interactions with chain J, 1 Ligand-Water interactions,- Hydrophobic interactions: C:W.45, C:F.52, C:I.69, C:W.407, C:W.407, C:L.408, C:F.418, C:F.418, C:F.418, J:V.21
- Metal complexes: H2O.20
CLA.50: 23 residues within 4Å:- Chain A: F.33, L.121, M.127, G.128, W.131
- Chain C: F.246, S.255, Y.256, G.259, A.260, M.263, L.420, H.423, L.424, A.427, R.431
- Chain H: V.12, V.16, F.23
- Ligands: CLA.8, LMG.15, CLA.52, BCR.60
17 PLIP interactions:9 interactions with chain C, 3 interactions with chain H, 5 interactions with chain A,- Hydrophobic interactions: C:F.246, C:Y.256, C:Y.256, C:L.420, C:L.424, H:V.12, H:V.16, H:F.23, A:L.121, A:W.131, A:W.131, A:W.131
- Water bridges: C:I.247, C:I.247
- Salt bridges: C:R.431
- Metal complexes: C:H.423
- pi-Stacking: A:W.131
CLA.51: 19 residues within 4Å:- Chain C: L.143, L.147, I.225, G.229, W.232, H.233, T.236, T.237, P.238, F.239, W.241, A.242, F.246
- Ligands: CLA.8, CLA.46, CLA.52, BCR.60, DGD.61, LMT.69
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:L.143, C:L.147, C:L.147, C:W.232, C:W.241, C:A.242, C:F.246
- Hydrogen bonds: C:F.239
- Salt bridges: C:H.233
- Metal complexes: C:H.233
CLA.52: 21 residues within 4Å:- Chain C: M.139, T.140, L.143, H.146, L.147, L.150, C.226, F.246, W.248, Y.253, Y.256, S.257, A.260, L.261, M.264
- Ligands: CLA.46, CLA.48, CLA.50, CLA.51, CLA.54, BCR.60
15 PLIP interactions:14 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:M.139, C:T.140, C:L.143, C:L.143, C:L.150, C:F.246, C:W.248, C:Y.253, C:Y.253, C:Y.256, C:Y.256, C:A.260, C:L.261
- Hydrogen bonds: C:H.146
- Metal complexes: H2O.15
CLA.53: 23 residues within 4Å:- Chain C: W.18, A.19, G.20, N.21, A.22, E.251, L.254, L.258, F.418, F.419, V.421, G.422, W.425, H.426, R.429
- Chain J: V.21
- Ligands: SQD.45, CLA.49, CLA.54, CLA.55, CLA.56, DGD.62, LHG.80
11 PLIP interactions:10 interactions with chain C, 1 interactions with chain J,- Hydrophobic interactions: C:L.254, C:L.254, C:F.419, C:V.421, C:W.425, J:V.21
- Hydrogen bonds: C:N.21
- Salt bridges: C:H.426, C:R.429
- pi-Stacking: C:W.425
- Metal complexes: C:H.426
CLA.54: 23 residues within 4Å:- Chain C: N.21, L.24, I.25, L.31, A.34, H.35, H.38, Y.131, W.133, I.142, G.250, E.251, Y.253, L.254, S.257, L.258, L.261
- Ligands: CLA.48, CLA.52, CLA.53, CLA.55, CLA.56, CLA.57
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:N.21, C:L.24, C:I.25, C:L.31, C:A.34, C:H.38, C:W.133, C:W.133, C:I.142, C:Y.253
- Hydrogen bonds: C:S.257
- Metal complexes: C:H.35
CLA.55: 18 residues within 4Å:- Chain C: N.21, H.38, L.41, I.42, W.45, L.261, L.415, F.418, F.419
- Chain J: P.20, L.24
- Ligands: CLA.47, CLA.48, CLA.49, CLA.53, CLA.54, CLA.56, LHG.80
12 PLIP interactions:10 interactions with chain C, 2 interactions with chain J,- Hydrophobic interactions: C:L.41, C:I.42, C:I.42, C:W.45, C:L.261, C:L.415, C:F.418, C:F.419, J:P.20, J:L.24
- Hydrogen bonds: C:N.21
- Metal complexes: C:H.38
CLA.56: 33 residues within 4Å:- Chain C: T.6, N.7, R.8, W.17, G.20, N.21, R.23, L.24, L.27, K.30, A.34, F.109, V.112
- Chain J: F.23, L.24, A.27, W.30, Q.31
- Chain R: I.19, I.20, L.23, N.29, L.30
- Chain S: M.19, V.20, V.23, P.24, A.28
- Ligands: CLA.53, CLA.54, CLA.55, BCR.95, LMG.109
21 PLIP interactions:7 interactions with chain C, 7 interactions with chain J, 4 interactions with chain S, 3 interactions with chain R,- Hydrophobic interactions: C:W.17, C:L.24, C:L.24, C:V.112, J:F.23, J:L.24, J:A.27, J:W.30, J:Q.31, S:V.20, S:V.23, S:P.24, S:A.28, R:I.19, R:I.20, R:L.30
- Hydrogen bonds: C:R.23
- Water bridges: C:K.30
- Salt bridges: C:R.8
- pi-Stacking: J:W.30, J:W.30
CLA.57: 19 residues within 4Å:- Chain C: H.35, A.39, L.107, L.122, F.128, F.129, Y.131, I.142, F.145, H.146, I.148, V.149, I.152, G.153
- Ligands: CLA.47, CLA.48, CLA.54, CLA.58, BCR.59
14 PLIP interactions:14 interactions with chain C,- Hydrophobic interactions: C:H.35, C:L.122, C:F.128, C:F.129, C:Y.131, C:I.142, C:F.145, C:F.145, C:I.148, C:I.148, C:V.149, C:V.149, C:I.152
- Metal complexes: C:H.146
CLA.58: 16 residues within 4Å:- Chain C: L.32, V.36, V.106, L.107, G.110, Y.113, H.114, P.119, L.122, Y.125, F.129
- Ligands: CLA.48, CLA.57, BCR.59, LMG.65, LMG.109
14 PLIP interactions:14 interactions with chain C,- Hydrophobic interactions: C:L.32, C:L.32, C:V.36, C:V.106, C:L.107, C:Y.113, C:L.122, C:Y.125, C:F.129, C:F.129, C:F.129
- Salt bridges: C:H.114
- pi-Stacking: C:F.129
- Metal complexes: C:H.114
CLA.75: 28 residues within 4Å:- Chain A: M.183, F.206
- Chain D: W.38, L.112, P.139, V.142, F.143, S.145, V.146, F.171, L.172, F.175, Q.176, W.181, T.182, H.187, G.190, V.191, V.194, L.195, L.269, S.272, A.273, V.276
- Ligands: CLA.4, CLA.5, CLA.6, PHO.72
15 PLIP interactions:15 interactions with chain D,- Hydrophobic interactions: D:W.38, D:L.112, D:V.142, D:F.143, D:F.171, D:F.175, D:Q.176, D:V.191, D:V.191, D:V.194, D:V.194, D:L.195, D:L.269
- pi-Stacking: D:W.181
- Metal complexes: D:H.187
CLA.76: 23 residues within 4Å:- Chain D: I.25, L.26, P.29, C.30, L.33, L.79, L.80, L.81, L.82, W.83, T.102, F.103, L.106, H.107
- Chain G: L.38, L.42
- Chain Q: F.10, G.12, G.16, A.17, V.19
- Ligands: CLA.24, UNL.107
13 PLIP interactions:2 interactions with chain Q, 10 interactions with chain D, 1 interactions with chain G,- Hydrophobic interactions: Q:F.10, Q:V.19, D:L.26, D:P.29, D:L.33, D:L.81, D:W.83, D:L.106, G:L.42
- Hydrogen bonds: D:L.82
- Salt bridges: D:H.107
- pi-Stacking: D:F.103
- Metal complexes: D:H.107
CLA.113: 29 residues within 4Å:- Chain U: F.119, Y.147, P.150, S.153, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, A.286, A.287, I.290
- Chain X: L.172, L.195, F.247
- Ligands: CLA.114, PHO.115, CLA.184, CLA.185, LHG.190
18 PLIP interactions:14 interactions with chain U, 4 interactions with chain X,- Hydrophobic interactions: U:F.119, U:P.150, U:F.182, U:F.186, U:Q.187, U:I.192, U:I.192, U:L.193, U:V.202, U:V.205, U:F.206, U:I.290, X:L.172, X:L.172, X:L.195, X:F.247
- Water bridges: U:I.290
- Metal complexes: U:H.198
CLA.114: 20 residues within 4Å:- Chain U: Q.199, V.202, A.203, F.206, G.207, L.210, W.278
- Chain X: F.147, V.165, I.168, F.169, F.171, L.172
- Ligands: CLA.113, PL9.123, PHO.125, LHG.128, DGD.175, CLA.185, LMG.194
11 PLIP interactions:6 interactions with chain X, 4 interactions with chain U, 1 Ligand-Water interactions,- Hydrophobic interactions: X:F.147, X:F.147, X:F.169, X:F.171, X:L.172, X:L.172, U:V.202, U:L.210, U:W.278
- pi-Stacking: U:F.206
- Metal complexes: H2O.46
CLA.116: 25 residues within 4Å:- Chain 1: V.8, Y.9, V.11, V.12, T.13, F.15, V.16
- Chain U: I.36, P.39, T.40, F.93, P.95, I.96, W.97, Q.113, L.114, F.117, H.118, L.121
- Ligands: BCR.117, LMG.126, CLA.162, CLA.163, DGD.173, UNL.201
18 PLIP interactions:14 interactions with chain U, 4 interactions with chain 1,- Hydrophobic interactions: U:I.36, U:P.39, U:T.40, U:F.93, U:P.95, U:I.96, U:W.97, U:W.97, U:L.114, U:F.117, U:L.121, 1:V.11, 1:V.12, 1:F.15
- Hydrogen bonds: U:I.96, 1:Y.9
- Salt bridges: U:H.118
- Metal complexes: U:H.118
CLA.129: 9 residues within 4Å:- Chain 0: F.40, L.54
- Chain V: W.184, G.185, P.186, F.189
- Ligands: CLA.130, HTG.150, BCR.199
8 PLIP interactions:4 interactions with chain V, 3 interactions with chain 0, 1 Ligand-Water interactions,- Hydrophobic interactions: V:W.184, V:P.186, V:F.189, V:F.189, 0:F.40, 0:F.40, 0:L.54
- Metal complexes: H2O.48
CLA.130: 27 residues within 4Å:- Chain 0: F.37, F.40, I.44, L.45, Y.48
- Chain V: E.183, W.184, G.188, F.189, P.191, G.196, A.199, H.200, A.203, A.204, V.207, F.245, F.246, F.249, V.250
- Chain X: V.144, L.152
- Ligands: CLA.129, CLA.131, CLA.137, BCR.199, DGD.200
21 PLIP interactions:14 interactions with chain V, 5 interactions with chain 0, 2 interactions with chain X,- Hydrophobic interactions: V:W.184, V:F.189, V:F.189, V:F.189, V:A.199, V:H.200, V:A.204, V:V.207, V:V.207, V:F.245, V:F.246, V:F.249, V:F.249, 0:F.37, 0:F.40, 0:I.44, 0:I.44, X:V.144, X:L.152
- Metal complexes: V:H.200
- pi-Stacking: 0:F.40
CLA.131: 24 residues within 4Å:- Chain 0: M.34, F.37, L.38, L.41
- Chain V: R.67, L.68, A.145, L.148, C.149, F.152, M.165, V.197, H.200, H.201, F.246, A.247, V.251, T.261
- Ligands: CLA.130, CLA.132, CLA.133, CLA.134, CLA.136, CLA.138
15 PLIP interactions:12 interactions with chain V, 3 interactions with chain 0,- Hydrophobic interactions: V:L.68, V:A.145, V:L.148, V:F.152, V:F.152, V:F.152, V:F.246, V:A.247, 0:F.37, 0:L.38, 0:L.41
- Hydrogen bonds: V:R.67
- Salt bridges: V:R.67
- pi-Cation interactions: V:H.200
- Metal complexes: V:H.201
CLA.132: 24 residues within 4Å:- Chain V: W.32, F.60, F.64, R.67, L.144, L.147, L.148, V.244, A.247, A.248, V.251, F.450, H.454, F.457, F.461
- Ligands: CLA.131, CLA.133, CLA.134, CLA.135, CLA.140, CLA.141, CLA.143, BCR.146, UNL.153
14 PLIP interactions:14 interactions with chain V,- Hydrophobic interactions: V:W.32, V:F.60, V:F.64, V:L.144, V:L.147, V:L.148, V:V.244, V:A.247, V:F.457, V:F.457, V:F.461, V:F.461
- Salt bridges: V:R.67
- Metal complexes: V:H.454
CLA.133: 28 residues within 4Å:- Chain V: T.26, V.29, A.30, W.32, A.33, A.37, V.61, F.64, M.65, R.67, L.68, V.95, H.99, L.102, L.142, A.145, G.146, A.204, G.208
- Ligands: CLA.131, CLA.132, CLA.134, CLA.137, CLA.138, CLA.140, CLA.143, BCR.147, UNL.153
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:T.26, V:V.29, V:A.30, V:W.32, V:A.33, V:L.68, V:V.95, V:L.102, V:A.145
- Water bridges: V:R.67
- Salt bridges: V:R.67
- Metal complexes: V:H.99
CLA.134: 26 residues within 4Å:- Chain V: L.68, G.69, V.70, W.90, V.95, A.98, H.99, V.101, L.102, L.105, L.148, G.151, F.152, F.155, H.156, F.161, G.162, P.163
- Ligands: SQD.11, UNL.14, CLA.131, CLA.132, CLA.133, CLA.144, BCR.147, UNL.153
10 PLIP interactions:10 interactions with chain V,- Hydrophobic interactions: V:L.68, V:W.90, V:W.90, V:A.98, V:V.101, V:L.148, V:F.155, V:F.161, V:F.161
- Metal complexes: V:H.156
CLA.135: 27 residues within 4Å:- Chain 4: F.35
- Chain 5: F.14
- Chain V: W.32, M.36, Y.39, Q.57, G.58, M.59, F.60, L.323, F.324, T.326, G.327, P.328, W.449, F.450, A.453, H.454
- Chain X: M.271
- Ligands: BCR.104, CLA.132, CLA.141, BCR.145, BCR.146, PL9.188, LHG.189, LMG.206
11 PLIP interactions:8 interactions with chain V, 1 interactions with chain 4, 1 interactions with chain 5, 1 Ligand-Water interactions,- Hydrophobic interactions: V:Y.39, V:F.60, V:F.60, V:F.324, V:W.449, V:W.449, 4:F.35, 5:F.14
- Hydrogen bonds: V:G.327
- pi-Stacking: V:F.60
- Metal complexes: H2O.53
CLA.136: 28 residues within 4Å:- Chain 0: L.38, L.42, L.45
- Chain V: L.228, T.235, S.238, S.239, A.242, F.245, F.246, F.462, H.465, I.466, G.469, T.472, L.473
- Chain X: F.110, I.113, M.116, L.117, F.120, I.140
- Ligands: CLA.131, CLA.137, CLA.138, CLA.186, UNL.193, DGD.200
19 PLIP interactions:7 interactions with chain X, 9 interactions with chain V, 3 interactions with chain 0,- Hydrophobic interactions: X:F.110, X:I.113, X:M.116, X:L.117, X:L.117, X:F.120, X:I.140, V:A.242, V:F.245, V:F.246, V:F.462, V:F.462, V:I.466, V:L.473, 0:L.38, 0:L.42, 0:L.45
- Hydrogen bonds: V:S.238
- Metal complexes: V:H.465
CLA.137: 26 residues within 4Å:- Chain 0: T.26, T.27, L.29, M.30, F.33, M.34, L.42
- Chain V: F.138, L.142, V.207, A.211, F.214, H.215, V.218, R.219, P.220, P.221, L.224, L.228
- Chain X: F.110
- Ligands: CLA.130, CLA.133, CLA.136, CLA.138, UNL.193, BCR.199
16 PLIP interactions:11 interactions with chain V, 4 interactions with chain 0, 1 interactions with chain X,- Hydrophobic interactions: V:F.138, V:F.138, V:F.138, V:L.142, V:V.207, V:A.211, V:F.214, V:F.214, V:L.224, V:L.228, 0:L.29, 0:M.30, 0:F.33, 0:L.42, X:F.110
- Salt bridges: V:H.215
CLA.138: 20 residues within 4Å:- Chain V: H.22, L.134, M.137, F.138, H.141, L.142, A.145, M.230, I.233, T.235, V.236, S.239, S.240, A.243
- Ligands: CLA.131, CLA.133, CLA.136, CLA.137, CLA.140, CLA.143
9 PLIP interactions:8 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: V:L.134, V:M.137, V:F.138, V:F.138, V:M.230, V:I.233, V:T.235
- Hydrogen bonds: V:H.141
- Metal complexes: H2O.50
CLA.139: 20 residues within 4Å:- Chain V: W.4, Y.5, R.6, V.7, H.8, T.9, L.237, I.241, L.460, F.461, F.463, G.464, W.467, H.468, R.471
- Ligands: CLA.140, CLA.141, CLA.142, LHG.156, LHG.189
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:H.8, V:T.9, V:L.237, V:L.237, V:I.241, V:F.461, V:F.463
- Hydrogen bonds: V:H.8
- Salt bridges: V:H.8, V:R.471
- pi-Stacking: V:W.467
- Metal complexes: V:H.468
CLA.140: 19 residues within 4Å:- Chain V: H.8, L.11, I.12, L.18, H.22, H.25, T.26, I.233, V.236, L.237, S.240, V.244
- Ligands: CLA.132, CLA.133, CLA.138, CLA.139, CLA.141, CLA.142, CLA.143
14 PLIP interactions:14 interactions with chain V,- Hydrophobic interactions: V:L.11, V:I.12, V:L.18, V:H.22, V:H.25, V:T.26, V:I.233, V:V.236, V:L.237, V:L.237, V:V.244
- Hydrogen bonds: V:S.240
- Salt bridges: V:H.22
- Metal complexes: V:H.22
CLA.141: 14 residues within 4Å:- Chain V: H.8, H.25, V.29, W.32, F.461
- Ligands: CLA.132, CLA.135, CLA.139, CLA.140, CLA.142, BCR.145, BCR.146, LHG.189, LMG.206
8 PLIP interactions:8 interactions with chain V,- Hydrophobic interactions: V:V.29, V:V.29, V:W.32, V:W.32, V:F.461, V:F.461
- Salt bridges: V:H.8
- Metal complexes: V:H.25
CLA.142: 24 residues within 4Å:- Chain 4: Q.8, V.10
- Chain 5: F.21, L.25
- Chain N: F.8
- Chain V: L.2, V.7, H.8, V.10, L.11, A.21, M.24, L.28, W.114
- Ligands: SQD.97, LMT.99, UNL.100, LMT.101, CLA.139, CLA.140, CLA.141, BCR.145, LHG.156, LMG.206
10 PLIP interactions:1 interactions with chain N, 2 interactions with chain 5, 7 interactions with chain V,- Hydrophobic interactions: N:F.8, 5:F.21, 5:L.25, V:V.7, V:V.7, V:L.11, V:M.24, V:L.28, V:W.114
- Metal complexes: V:H.8
CLA.143: 19 residues within 4Å:- Chain 0: L.6, L.10, L.13, N.14
- Chain V: I.19, H.22, L.23, T.26, L.132, M.137, I.140, H.141, L.144
- Ligands: CLA.132, CLA.133, CLA.138, CLA.140, CLA.144, BCR.147
10 PLIP interactions:6 interactions with chain V, 4 interactions with chain 0,- Hydrophobic interactions: V:I.19, V:L.132, V:I.140, V:L.144, 0:L.6, 0:L.10, 0:L.13, 0:L.13
- Hydrogen bonds: V:H.22
- Metal complexes: V:H.141
CLA.144: 15 residues within 4Å:- Chain 0: T.4, L.6, G.7, L.10
- Chain V: I.19, L.23, A.109, W.112, H.113, L.119, L.121, F.122
- Ligands: CLA.134, CLA.143, BCR.147
13 PLIP interactions:9 interactions with chain V, 4 interactions with chain 0,- Hydrophobic interactions: V:I.19, V:L.23, V:W.112, V:W.112, V:L.119, V:F.122, 0:L.6, 0:L.10
- pi-Stacking: V:W.112, V:W.112
- Metal complexes: V:H.113
- Hydrogen bonds: 0:T.4
- Water bridges: 0:W.5
CLA.158: 22 residues within 4Å:- Chain W: T.76, L.77, L.150, G.153, A.154, L.157, L.167, I.206, V.215, H.219, I.222, A.260, M.264, I.267, F.271, V.278, Y.279
- Ligands: CLA.159, CLA.160, CLA.163, CLA.164, BCR.172
12 PLIP interactions:12 interactions with chain W,- Hydrophobic interactions: W:A.154, W:L.157, W:I.206, W:I.222, W:I.222, W:A.260, W:M.264, W:I.267, W:F.271, W:V.278
- Hydrogen bonds: W:Y.279
- Metal complexes: W:H.219
CLA.159: 24 residues within 4Å:- Chain W: W.45, I.69, H.73, L.77, W.79, L.156, K.160, F.164, L.261, M.264, A.268, V.272, Y.279, L.408, H.412, L.415, A.416, F.419
- Ligands: CLA.158, CLA.160, CLA.161, CLA.167, CLA.169, HTG.178
17 PLIP interactions:17 interactions with chain W,- Hydrophobic interactions: W:W.45, W:W.45, W:I.69, W:L.77, W:W.79, W:W.79, W:K.160, W:F.164, W:L.261, W:M.264, W:A.268, W:L.408, W:F.419
- Hydrogen bonds: W:Y.279
- Salt bridges: W:H.73, W:H.412
- Metal complexes: W:H.412
CLA.160: 19 residues within 4Å:- Chain W: I.42, V.43, A.46, T.50, L.70, H.73, I.74, L.77, V.96, H.100, L.261
- Ligands: CLA.158, CLA.159, CLA.164, CLA.166, CLA.167, CLA.169, CLA.170, LMG.177
7 PLIP interactions:7 interactions with chain W,- Hydrophobic interactions: W:V.43, W:A.46, W:L.77, W:V.96, W:L.261
- Salt bridges: W:H.73
- Metal complexes: W:H.100
CLA.161: 20 residues within 4Å:- Chain 3: P.17, V.21
- Chain U: F.285
- Chain W: W.45, M.49, F.52, Q.66, G.67, I.69, W.407, S.411, H.412, F.418
- Ligands: CLA.159, CLA.165, CLA.167, DGD.174, DGD.175, LMG.176, LHG.191
13 PLIP interactions:10 interactions with chain W, 1 interactions with chain U, 1 interactions with chain 3, 1 Ligand-Water interactions,- Hydrophobic interactions: W:W.45, W:F.52, W:I.69, W:I.69, W:W.407, W:W.407, W:W.407, W:F.418, W:F.418, U:F.285, 3:V.21
- pi-Stacking: W:W.407
- Metal complexes: H2O.61
CLA.162: 23 residues within 4Å:- Chain 1: V.16, F.19, F.23
- Chain U: F.33, S.124, M.127, G.128, W.131
- Chain W: F.246, S.255, Y.256, G.259, A.260, L.420, H.423, L.424, A.427, R.431
- Ligands: CLA.116, LMG.126, CLA.164, BCR.172, DGD.173
18 PLIP interactions:11 interactions with chain W, 3 interactions with chain 1, 4 interactions with chain U,- Hydrophobic interactions: W:F.246, W:Y.256, W:Y.256, W:L.420, W:L.420, W:L.424, 1:V.16, 1:F.19, 1:F.23, U:W.131, U:W.131, U:W.131
- Hydrogen bonds: W:Y.256
- Water bridges: W:I.247, W:I.247
- Salt bridges: W:R.431
- Metal complexes: W:H.423
- pi-Stacking: U:W.131
CLA.163: 21 residues within 4Å:- Chain W: L.143, L.147, L.195, L.196, I.225, C.226, G.229, W.232, H.233, T.236, T.237, P.238, F.239, W.241, F.246
- Ligands: CLA.116, LMT.127, CLA.158, CLA.164, BCR.172, DGD.173
9 PLIP interactions:9 interactions with chain W,- Hydrophobic interactions: W:L.147, W:L.147, W:L.195, W:L.196, W:I.225, W:W.232
- Hydrogen bonds: W:F.239
- Salt bridges: W:H.233
- Metal complexes: W:H.233
CLA.164: 22 residues within 4Å:- Chain W: M.139, T.140, L.143, H.146, L.147, L.150, C.226, W.241, F.246, W.248, Y.253, Y.256, S.257, A.260, L.261, M.264
- Ligands: CLA.158, CLA.160, CLA.162, CLA.163, CLA.166, BCR.172
16 PLIP interactions:15 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: W:M.139, W:T.140, W:L.143, W:L.143, W:L.150, W:W.241, W:F.246, W:F.246, W:F.246, W:W.248, W:Y.253, W:Y.253, W:Y.256, W:Y.256, W:L.261
- Metal complexes: H2O.58
CLA.165: 24 residues within 4Å:- Chain W: F.15, W.18, A.19, G.20, N.21, A.22, L.254, L.258, F.418, F.419, V.421, G.422, W.425, H.426, R.429
- Ligands: SQD.118, CLA.161, CLA.166, CLA.167, CLA.168, DGD.174, DGD.175, LMG.176, LHG.191
11 PLIP interactions:11 interactions with chain W,- Hydrophobic interactions: W:L.254, W:F.419, W:F.419, W:V.421, W:W.425, W:W.425
- Hydrogen bonds: W:N.21, W:N.21
- Salt bridges: W:H.426, W:R.429
- Metal complexes: W:H.426
CLA.166: 24 residues within 4Å:- Chain W: N.21, L.24, I.25, L.31, A.34, H.35, H.38, Y.131, W.133, H.146, L.150, G.250, E.251, Y.253, L.254, S.257, L.258, L.261
- Ligands: CLA.160, CLA.164, CLA.165, CLA.167, CLA.168, CLA.169
12 PLIP interactions:12 interactions with chain W,- Hydrophobic interactions: W:N.21, W:L.24, W:L.31, W:A.34, W:H.38, W:Y.131, W:W.133, W:W.133, W:L.150, W:Y.253
- Hydrogen bonds: W:S.257
- Metal complexes: W:H.35
CLA.167: 19 residues within 4Å:- Chain 3: P.20, V.21, L.24
- Chain W: N.21, H.38, L.41, I.42, W.45, L.261, F.418, F.419
- Ligands: CLA.159, CLA.160, CLA.161, CLA.165, CLA.166, CLA.168, LMG.176, LHG.191
10 PLIP interactions:8 interactions with chain W, 2 interactions with chain 3,- Hydrophobic interactions: W:L.41, W:I.42, W:W.45, W:L.261, W:F.418, W:F.419, 3:P.20, 3:V.21
- Hydrogen bonds: W:N.21
- Metal complexes: W:H.38
CLA.168: 30 residues within 4Å:- Chain 3: F.23, L.24, A.27, W.30, Q.31
- Chain W: R.8, W.17, G.20, N.21, R.23, L.24, L.27, K.30, A.34, L.41, G.108, F.109, V.112, A.115, I.116
- Ligands: CLA.165, CLA.166, CLA.167, BCR.204, LMG.216
- Chain b: I.20, N.29
- Chain c: M.19, V.20, A.28
19 PLIP interactions:7 interactions with chain W, 2 interactions with chain c, 9 interactions with chain 3, 1 interactions with chain b,- Hydrophobic interactions: W:L.24, W:L.41, W:V.112, W:A.115, W:I.116, c:V.20, c:A.28, 3:F.23, 3:F.23, 3:L.24, 3:A.27, 3:W.30, 3:Q.31, b:I.20
- Hydrogen bonds: W:R.23
- Salt bridges: W:R.8
- Water bridges: 3:Q.31
- pi-Stacking: 3:W.30, 3:W.30
CLA.169: 22 residues within 4Å:- Chain W: L.32, H.35, V.36, A.39, L.107, L.122, F.128, F.129, Y.131, I.142, F.145, H.146, I.148, V.149, I.152, G.153, L.156
- Ligands: CLA.159, CLA.160, CLA.166, CLA.170, BCR.171
17 PLIP interactions:17 interactions with chain W,- Hydrophobic interactions: W:L.32, W:H.35, W:L.122, W:F.128, W:Y.131, W:I.142, W:F.145, W:F.145, W:F.145, W:F.145, W:F.145, W:I.148, W:V.149, W:V.149, W:I.152, W:L.156
- Metal complexes: W:H.146
CLA.170: 16 residues within 4Å:- Chain W: L.32, V.36, V.106, L.107, G.110, Y.113, H.114, P.119, L.122, Y.125, F.129
- Ligands: CLA.160, CLA.169, BCR.171, LMG.177, LMG.216
14 PLIP interactions:14 interactions with chain W,- Hydrophobic interactions: W:V.36, W:V.106, W:L.107, W:Y.113, W:L.122, W:Y.125, W:F.129, W:F.129, W:F.129, W:F.129
- Hydrogen bonds: W:Y.113
- Salt bridges: W:H.114
- pi-Stacking: W:F.129
- Metal complexes: W:H.114
CLA.184: 22 residues within 4Å:- Chain 7: I.14
- Chain U: T.45, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain X: M.188, V.191, A.192, L.195, G.196, L.199
- Ligands: CLA.113, PHO.115, LHG.156, CLA.185, PL9.188, LHG.190
9 PLIP interactions:1 interactions with chain 7, 2 interactions with chain X, 5 interactions with chain U, 1 Ligand-Water interactions,- Hydrophobic interactions: 7:I.14, X:V.191, X:L.199, U:T.45, U:V.157, U:F.158, U:F.180, U:F.182
- Metal complexes: H2O.45
CLA.185: 30 residues within 4Å:- Chain U: M.183, F.206
- Chain X: L.35, W.38, L.112, P.139, V.142, F.143, S.145, V.146, F.171, L.172, F.175, Q.176, W.181, T.182, H.187, G.190, V.191, V.194, L.195, L.269, S.272, A.273, V.276
- Ligands: CLA.113, CLA.114, PHO.125, CLA.184, LMG.194
16 PLIP interactions:16 interactions with chain X,- Hydrophobic interactions: X:L.35, X:W.38, X:L.112, X:V.142, X:F.143, X:F.171, X:F.175, X:Q.176, X:W.181, X:T.182, X:V.191, X:V.194, X:L.195, X:L.269
- pi-Stacking: X:W.181
- Metal complexes: X:H.187
CLA.186: 26 residues within 4Å:- Chain 0: L.36, L.38, L.42
- Chain X: I.25, L.26, P.29, C.30, L.33, L.79, L.80, L.81, L.82, W.83, W.94, T.102, F.103, L.106, H.107
- Ligands: PL9.123, CLA.136, UNL.215
- Chain a: G.12, L.13, G.16, A.17, V.19
15 PLIP interactions:11 interactions with chain X, 2 interactions with chain 0, 2 interactions with chain a,- Hydrophobic interactions: X:L.26, X:P.29, X:L.33, X:L.82, X:W.83, X:W.83, X:L.106, 0:L.38, 0:L.42, a:L.13, a:V.19
- Hydrogen bonds: X:L.82
- Salt bridges: X:H.107
- pi-Stacking: X:F.103
- Metal complexes: X:H.107
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.7: 23 residues within 4Å:- Chain A: L.41, A.44, T.45, F.48, I.115, Y.126, Q.130, A.146, Y.147, P.150, M.172, G.175, P.279, V.283
- Chain D: L.195, A.198, L.199, I.203, W.243, F.247
- Ligands: CLA.4, CLA.5, LHG.79
15 PLIP interactions:2 interactions with chain D, 13 interactions with chain A- Hydrophobic interactions: D:L.195, D:A.198, A:L.41, A:A.44, A:F.48, A:F.48, A:I.115, A:A.146, A:Y.147, A:Y.147, A:P.150, A:P.279, A:V.283
- Hydrogen bonds: A:Y.126, A:Q.130
PHO.72: 31 residues within 4Å:- Chain A: F.206, A.209, L.210, M.214, F.255, L.258, I.259
- Chain D: L.27, A.31, A.34, L.35, W.38, I.104, G.108, G.111, L.112, F.115, Q.119, N.132, A.135, F.136, P.139, F.143, G.164, V.165, P.265, V.266, L.269
- Ligands: CLA.6, PL9.13, CLA.75
21 PLIP interactions:19 interactions with chain D, 2 interactions with chain A- Hydrophobic interactions: D:A.31, D:W.38, D:W.38, D:W.38, D:W.38, D:I.104, D:L.112, D:L.112, D:F.115, D:F.115, D:A.135, D:P.139, D:F.143, D:V.165, D:P.265, D:L.269, A:F.206, A:L.210
- Hydrogen bonds: D:Q.119, D:N.132
- pi-Stacking: D:F.136
PHO.115: 25 residues within 4Å:- Chain U: L.41, A.44, T.45, F.48, I.115, Y.126, Q.130, A.146, Y.147, P.150, M.172, G.175, P.279, V.283
- Chain X: L.195, A.198, L.199, A.202, I.203, W.243, F.247
- Ligands: CLA.113, SQD.120, CLA.184, PL9.188
15 PLIP interactions:3 interactions with chain X, 12 interactions with chain U- Hydrophobic interactions: X:L.195, X:L.199, X:A.202, U:L.41, U:A.44, U:F.48, U:I.115, U:A.146, U:Y.147, U:Y.147, U:P.150, U:P.279, U:V.283
- Hydrogen bonds: U:Q.130, U:Y.147
PHO.125: 30 residues within 4Å:- Chain U: F.206, A.209, L.210, M.214, L.258, I.259
- Chain X: L.27, A.31, A.34, L.35, W.38, I.104, G.108, G.111, L.112, F.115, Q.119, N.132, A.135, F.136, P.139, F.143, G.164, V.165, P.265, V.266, L.269
- Ligands: CLA.114, PL9.123, CLA.185
22 PLIP interactions:19 interactions with chain X, 3 interactions with chain U- Hydrophobic interactions: X:A.31, X:L.35, X:W.38, X:W.38, X:W.38, X:W.38, X:I.104, X:L.112, X:F.115, X:F.115, X:A.135, X:P.139, X:F.143, X:V.165, X:P.265, X:L.269, U:F.206, U:A.209, U:L.210
- Hydrogen bonds: X:Q.119, X:N.132
- pi-Stacking: X:F.136
- 22 x BCR: BETA-CAROTENE(Non-covalent)
BCR.9: 15 residues within 4Å:- Chain A: F.17, V.35, L.42, A.43, I.46, I.50, A.51, I.96, W.105, L.106
- Chain H: F.15
- Ligands: CLA.8, UNL.14, UNL.92, HTG.152
Ligand excluded by PLIPBCR.33: 14 residues within 4Å:- Chain 7: F.19
- Chain B: M.24, L.28, C.111, W.114
- Chain L: L.13
- Ligands: CLA.23, CLA.29, CLA.30, BCR.34, SQD.36, LMG.98, LMT.210, BCR.211
Ligand excluded by PLIPBCR.34: 14 residues within 4Å:- Chain B: L.28, G.31, W.32, I.100, V.101, S.103, G.104
- Ligands: CLA.20, CLA.23, CLA.29, BCR.33, SQD.36, LMG.98, BCR.211
Ligand excluded by PLIPBCR.35: 16 residues within 4Å:- Chain 7: F.18, F.22, F.23
- Chain B: L.102, L.105, L.106, L.108, A.109, C.111, W.112, V.115
- Ligands: CLA.21, CLA.22, CLA.32, UNL.41, SQD.120
Ligand excluded by PLIPBCR.59: 14 residues within 4Å:- Chain C: F.94, V.98, I.102, S.103, V.106, L.107
- Chain J: Y.6
- Chain S: V.51, G.55, N.58, F.59
- Ligands: CLA.57, CLA.58, LMG.65
Ligand excluded by PLIPBCR.60: 17 residues within 4Å:- Chain C: I.191, F.192, L.195, I.206, D.214, V.215, G.218, H.219, I.222, F.246
- Chain H: V.20, F.23, L.24
- Ligands: CLA.46, CLA.50, CLA.51, CLA.52
Ligand excluded by PLIPBCR.77: 14 residues within 4Å:- Chain D: Y.32, L.33, G.36, G.37, L.39, T.40, F.91
- Chain F: P.28, T.29, F.32, L.33
- Chain I: V.20, V.24
- Ligands: LMG.84
Ligand excluded by PLIPBCR.90: 16 residues within 4Å:- Chain G: M.30, F.33, M.34, L.36, F.37, V.39, F.40, I.43, L.54
- Chain Q: T.1, I.2, L.6, F.10
- Ligands: CLA.17, CLA.19, CLA.25
Ligand excluded by PLIPBCR.95: 16 residues within 4Å:- Chain C: A.37, G.40, L.41, L.101, S.104, A.105, G.108, A.115
- Chain J: Y.6, F.9, L.16, F.23
- Chain S: L.9, S.16
- Ligands: CLA.56, BCR.108
Ligand excluded by PLIPBCR.104: 18 residues within 4Å:- Chain A: L.28
- Chain N: F.8, A.11, I.14, A.15, F.17, F.18, I.21, F.22
- Chain V: W.32, S.35, M.36, Y.39
- Ligands: SQD.11, SQD.97, CLA.135, BCR.145, BCR.146
Ligand excluded by PLIPBCR.108: 22 residues within 4Å:- Chain C: F.44
- Chain I: T.14, G.17, M.18
- Chain J: L.12, I.19, L.22, F.23, A.25, L.26, F.28, V.29, A.32
- Chain R: I.12, G.13, G.16, P.17
- Chain S: S.16, F.17
- Ligands: SQD.45, UNL.70, BCR.95
Ligand excluded by PLIPBCR.117: 17 residues within 4Å:- Chain 1: F.15
- Chain U: V.35, L.42, A.43, I.46, C.47, I.50, A.51, A.55, I.96, L.106, P.111
- Ligands: HTG.37, HTG.40, CLA.116, UNL.124, UNL.201
Ligand excluded by PLIPBCR.145: 12 residues within 4Å:- Chain 5: L.13
- Chain N: F.19
- Chain V: M.24, L.28, W.114
- Ligands: SQD.97, BCR.104, CLA.135, CLA.141, CLA.142, BCR.146, LMG.206
Ligand excluded by PLIPBCR.146: 13 residues within 4Å:- Chain V: L.28, G.31, W.32, S.35, I.100, V.101, S.103, G.104
- Ligands: BCR.104, CLA.132, CLA.135, CLA.141, BCR.145
Ligand excluded by PLIPBCR.147: 14 residues within 4Å:- Chain N: F.18, F.22, F.23
- Chain V: L.102, L.105, L.108, A.109, W.112
- Ligands: SQD.11, CLA.133, CLA.134, CLA.143, CLA.144, UNL.153
Ligand excluded by PLIPBCR.171: 14 residues within 4Å:- Chain 3: Y.6
- Chain W: F.94, V.98, I.102, S.103, V.106, L.107
- Ligands: CLA.169, CLA.170, LMG.177
- Chain c: V.51, G.55, N.58, F.59
Ligand excluded by PLIPBCR.172: 17 residues within 4Å:- Chain 1: V.20, F.23, L.24
- Chain W: I.191, Y.194, L.195, I.206, V.209, V.215, G.218, H.219, I.222, F.246
- Ligands: CLA.158, CLA.162, CLA.163, CLA.164
Ligand excluded by PLIPBCR.187: 15 residues within 4Å:- Chain 2: V.20, V.24
- Chain X: Y.32, L.33, G.36, G.37, L.39, T.40, F.91
- Chain Z: P.28, T.29, F.32, L.33, I.36
- Ligands: LMG.194
Ligand excluded by PLIPBCR.199: 16 residues within 4Å:- Chain 0: M.30, F.33, M.34, L.36, F.37, V.39, F.40, I.43, L.54
- Ligands: CLA.129, CLA.130, CLA.137
- Chain a: T.1, I.2, L.6, F.10
Ligand excluded by PLIPBCR.204: 17 residues within 4Å:- Chain 3: Y.6, F.9, F.23
- Chain W: A.37, G.40, L.41, L.101, I.102, S.104, A.105, G.108, A.115
- Ligands: CLA.168, BCR.205
- Chain c: L.9, L.12, S.16
Ligand excluded by PLIPBCR.205: 21 residues within 4Å:- Chain 2: A.13, T.14, G.17, M.18
- Chain 3: L.16, I.19, L.22, A.25, F.28, V.29
- Chain W: F.44
- Ligands: SQD.118, BCR.204
- Chain b: I.12, G.13, G.16, P.17
- Chain c: V.13, S.16, F.17, V.20
Ligand excluded by PLIPBCR.211: 21 residues within 4Å:- Chain 7: F.8, A.11, I.14, A.15, F.17, F.18, I.21, F.22
- Chain B: W.32, S.35, M.36, Y.39
- Chain U: L.28
- Ligands: CLA.23, CLA.30, BCR.33, BCR.34, SQD.36, LMT.44, SQD.120, LHG.190
Ligand excluded by PLIP- 12 x GOL: GLYCEROL(Non-functional Binders)
GOL.10: 6 residues within 4Å:- Chain A: L.102, D.103
- Chain V: W.74, S.75
- Ligands: HTG.149, HTG.152
2 PLIP interactions:2 interactions with chain A- Water bridges: A:L.102, A:D.103
GOL.39: 7 residues within 4Å:- Chain B: W.274, D.275, R.356, R.357, M.358, P.359
- Chain D: E.327
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:D.275, B:R.356, B:R.356
- Water bridges: B:W.274, B:S.277
GOL.42: 6 residues within 4Å:- Chain B: I.12, A.131, L.132, G.231, I.233
- Chain G: Y.17
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain G- Hydrogen bonds: B:L.132, B:L.132, B:I.233, G:Y.17
- Water bridges: B:I.12, B:D.14
GOL.43: 8 residues within 4Å:- Chain B: A.385, S.387, Q.393
- Chain O: L.17, Y.21, G.22, E.23, K.24
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.385, B:Q.393
GOL.67: 10 residues within 4Å:- Chain A: L.341, L.343
- Chain C: M.378, T.379, H.380, A.381, G.391, V.392, E.395
- Chain P: K.47
6 PLIP interactions:4 interactions with chain C, 2 interactions with chain P- Hydrogen bonds: C:M.378, C:A.381, C:V.392, P:K.47
- Water bridges: C:T.379, P:K.47
GOL.103: 3 residues within 4Å:- Chain M: P.18, R.40, Y.238
2 PLIP interactions:2 interactions with chain M- Hydrogen bonds: M:R.40, M:E.208
GOL.119: 4 residues within 4Å:- Chain B: S.75
- Chain U: D.103
- Ligands: HTG.37, HTG.40
4 PLIP interactions:1 interactions with chain B, 2 interactions with chain 6, 1 interactions with chain U- Hydrogen bonds: B:S.75
- Water bridges: 6:Q.107, 6:Q.107, U:L.102
GOL.151: 7 residues within 4Å:- Chain V: I.12, N.13, A.131, L.132, G.231, N.232, I.233
3 PLIP interactions:3 interactions with chain V- Hydrogen bonds: V:L.132, V:I.233
- Water bridges: V:N.232
GOL.155: 6 residues within 4Å:- Chain V: W.274, D.275, R.356, R.357, P.359
- Chain X: E.327
6 PLIP interactions:1 interactions with chain X, 5 interactions with chain V- Hydrogen bonds: X:E.327, V:W.274, V:R.356, V:R.356
- Water bridges: V:W.274, V:S.277
GOL.157: 10 residues within 4Å:- Chain 9: K.47
- Chain U: L.341, L.343
- Chain W: M.378, T.379, H.380, A.381, G.391, V.392, E.395
7 PLIP interactions:5 interactions with chain W, 2 interactions with chain 9- Hydrogen bonds: W:M.378, W:A.381, W:V.392, W:E.395, 9:K.47
- Water bridges: W:T.379, 9:K.47
GOL.182: 6 residues within 4Å:- Chain 6: I.8, L.13, K.16, P.18, R.40
- Chain W: N.355
4 PLIP interactions:3 interactions with chain 6, 1 interactions with chain W- Hydrogen bonds: 6:L.13, 6:R.40, 6:R.40, W:N.355
GOL.213: 6 residues within 4Å:- Chain 8: K.104
- Chain 9: I.45, G.133, K.134, Y.137
- Chain U: L.341
4 PLIP interactions:1 interactions with chain 8, 3 interactions with chain 9- Water bridges: 8:K.104, 9:K.134, 9:K.134
- Hydrogen bonds: 9:K.134
- 8 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.11: 18 residues within 4Å:- Chain A: W.20, N.26, R.27, L.28, V.30, I.38, L.42, T.45
- Chain N: F.22
- Chain V: L.108, W.112, Y.116
- Ligands: CLA.5, UNL.14, UNL.92, BCR.104, CLA.134, BCR.147
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain V- Hydrophobic interactions: A:N.26, A:V.30, A:I.38, A:I.38, A:L.42, V:L.108
- Hydrogen bonds: A:W.20, A:R.27, A:L.28
SQD.36: 16 residues within 4Å:- Chain 4: R.14, Y.18
- Chain 5: L.16, Y.26
- Chain 7: C.12, F.19, F.23
- Chain B: R.17, L.28, S.103, W.114
- Chain K: R.7
- Ligands: CLA.30, BCR.33, BCR.34, BCR.211
14 PLIP interactions:2 interactions with chain 5, 1 interactions with chain K, 4 interactions with chain 4, 4 interactions with chain B, 3 interactions with chain 7- Hydrophobic interactions: 5:L.16, 4:Y.18, B:L.28, 7:F.19, 7:F.19, 7:F.19
- Hydrogen bonds: 5:Y.26, 4:R.14, 4:R.14
- Salt bridges: K:R.7, 4:R.14, B:R.17
- Water bridges: B:R.17, B:R.17
SQD.45: 23 residues within 4Å:- Chain A: L.200, G.204, N.267, S.270, F.273, F.274, A.277, W.278, V.281, G.282
- Chain C: Q.10, A.16, W.18
- Chain D: S.220, F.222, R.223
- Chain I: I.21
- Chain J: A.25, F.28
- Ligands: CLA.53, UNL.70, LHG.80, BCR.108
13 PLIP interactions:2 interactions with chain C, 7 interactions with chain A, 3 interactions with chain J, 1 interactions with chain I- Hydrophobic interactions: C:W.18, A:A.277, A:W.278, A:V.281, J:A.25, J:F.28, J:F.28, I:I.21
- Hydrogen bonds: C:Q.10, A:N.267, A:S.270
- Water bridges: A:N.266, A:N.267
SQD.85: 13 residues within 4Å:- Chain D: R.14, R.16
- Chain E: E.7
- Chain F: F.15, T.16, V.17, V.20
- Chain Q: T.23, I.30, D.34
- Chain T: Q.29, L.33
- Ligands: PL9.13
8 PLIP interactions:3 interactions with chain D, 2 interactions with chain F, 1 interactions with chain T, 2 interactions with chain Q- Hydrogen bonds: D:R.14, F:V.17, T:Q.29
- Water bridges: D:W.11, F:R.18
- Salt bridges: D:R.16
- Hydrophobic interactions: Q:I.30, Q:I.30
SQD.97: 19 residues within 4Å:- Chain 4: R.7
- Chain K: R.14, Y.18
- Chain L: V.15, L.16, Y.26
- Chain N: C.12, L.16, F.19, F.23
- Chain V: R.17, L.28, S.103, F.107, W.114
- Ligands: UNL.100, BCR.104, CLA.142, BCR.145
16 PLIP interactions:4 interactions with chain K, 3 interactions with chain L, 5 interactions with chain V, 3 interactions with chain 4, 1 interactions with chain N- Hydrophobic interactions: K:Y.18, L:V.15, L:L.16, V:L.28, V:F.107, N:F.19
- Hydrogen bonds: K:R.14, K:R.14, L:Y.26, 4:R.7
- Salt bridges: K:R.14, V:R.17, 4:R.7
- Water bridges: V:R.17, V:R.17, 4:R.7
SQD.118: 24 residues within 4Å:- Chain 3: F.28
- Chain U: L.200, A.203, G.204, F.265, N.267, S.270, F.273, A.277, W.278, V.281, G.282
- Chain W: Q.10, A.16, W.17, W.18
- Chain X: S.220, F.222, R.223
- Ligands: CLA.165, LMG.176, UNL.181, LHG.191, BCR.205
21 PLIP interactions:5 interactions with chain W, 12 interactions with chain U, 2 interactions with chain X, 2 interactions with chain 3- Hydrophobic interactions: W:W.17, W:W.18, U:L.200, U:A.203, U:F.265, U:F.273, U:A.277, U:W.278, U:V.281, U:V.281, 3:F.28, 3:F.28
- Hydrogen bonds: W:Q.10, U:N.267, U:S.270, U:S.270, X:S.220
- Water bridges: W:W.17, W:W.17, U:N.267
- Salt bridges: X:R.223
SQD.120: 15 residues within 4Å:- Chain 7: F.22
- Chain B: W.112, Y.116
- Chain U: W.20, N.26, R.27, L.28, T.45
- Ligands: CLA.22, BCR.35, PHO.115, UNL.124, LHG.190, UNL.201, BCR.211
7 PLIP interactions:2 interactions with chain B, 5 interactions with chain U- Hydrogen bonds: B:Y.116, B:Y.116, U:W.20, U:R.27, U:L.28
- Hydrophobic interactions: U:N.26, U:T.45
SQD.197: 12 residues within 4Å:- Chain X: W.11, R.16
- Chain Y: E.7
- Chain Z: I.14, F.15, T.16, V.17
- Ligands: PL9.123
- Chain a: T.23, L.27, I.30, D.34
5 PLIP interactions:2 interactions with chain a, 1 interactions with chain X, 2 interactions with chain Z- Hydrophobic interactions: a:L.27, a:I.30, Z:I.14
- Salt bridges: X:R.16
- Hydrogen bonds: Z:V.17
- 2 x OEX: CA-MN4-O5 CLUSTER(Covalent)
OEX.12: 10 residues within 4Å:- Chain A: D.170, V.185, E.189, H.332, E.333, H.337, D.342, A.344
- Chain C: E.336, R.339
19 PLIP interactions:11 interactions with chain A, 4 interactions with chain C, 4 Ligand-Water interactions- Water bridges: A:D.61
- Metal complexes: A:D.170, A:D.170, A:E.189, A:E.189, A:H.332, A:E.333, A:E.333, A:D.342, A:D.342, A:A.344, C:E.336, C:E.336, H2O.1, H2O.2, H2O.3, H2O.6
- Hydrogen bonds: C:R.339, C:R.339
OEX.122: 10 residues within 4Å:- Chain U: D.61, D.170, E.189, H.332, E.333, H.337, D.342, A.344
- Chain W: E.336, R.339
17 PLIP interactions:9 interactions with chain U, 4 interactions with chain W, 4 Ligand-Water interactions- Metal complexes: U:D.170, U:D.170, U:E.189, U:H.332, U:E.333, U:E.333, U:D.342, U:D.342, U:A.344, W:E.336, W:E.336, H2O.43, H2O.43, H2O.45, H2O.46
- Hydrogen bonds: W:R.339, W:R.339
- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.13: 25 residues within 4Å:- Chain A: F.211, M.214, H.215, L.218, H.252, F.255, I.259, A.263, S.264, F.265, L.271, F.274
- Chain D: F.28, P.29, A.31, Y.32
- Chain F: A.21, T.24, L.25
- Chain Q: T.23, L.27
- Ligands: CLA.6, PHO.72, SQD.85, LHG.86
16 PLIP interactions:11 interactions with chain A, 1 interactions with chain Q, 3 interactions with chain D, 1 interactions with chain F- Hydrophobic interactions: A:F.211, A:F.211, A:L.218, A:L.218, A:F.255, A:I.259, A:F.265, A:L.271, A:L.271, A:F.274, Q:L.27, D:P.29, D:A.31, D:Y.32, F:L.25
- Hydrogen bonds: A:F.265
PL9.78: 32 residues within 4Å:- Chain A: V.49, F.52, I.53
- Chain D: M.188, M.189, A.192, G.193, L.199, L.200, I.203, H.204, T.207, M.236, A.239, N.240, W.243, I.249, A.250, F.251, L.257, F.260, F.263, V.264, G.268
- Chain K: L.23, V.26, L.29
- Chain N: F.10
- Ligands: CLA.5, CLA.23, LHG.79, LHG.96
26 PLIP interactions:16 interactions with chain D, 3 interactions with chain N, 4 interactions with chain A, 3 interactions with chain K- Hydrophobic interactions: D:M.188, D:M.189, D:L.199, D:L.200, D:I.203, D:T.207, D:A.239, D:W.243, D:F.251, D:F.251, D:L.257, D:F.260, D:F.263, D:V.264, N:F.10, N:F.10, N:F.10, A:V.49, A:F.52, A:F.52, A:I.53, K:L.23, K:V.26, K:L.29
- Hydrogen bonds: D:H.204, D:F.251
PL9.123: 24 residues within 4Å:- Chain U: F.211, M.214, H.215, L.218, Y.246, I.248, A.251, H.252, F.255, I.259, A.263, S.264, F.265, L.271, F.274
- Chain Z: A.21, T.24
- Ligands: CLA.114, PHO.125, LHG.128, CLA.186, SQD.197
- Chain a: T.23, L.27
19 PLIP interactions:17 interactions with chain U, 2 interactions with chain a- Hydrophobic interactions: U:F.211, U:F.211, U:M.214, U:L.218, U:I.248, U:A.251, U:H.252, U:F.255, U:F.255, U:F.255, U:I.259, U:F.265, U:L.271, U:L.271, U:F.274, a:T.23, a:L.27
- Hydrogen bonds: U:H.215, U:F.265
PL9.188: 33 residues within 4Å:- Chain 4: L.23, V.26, L.29
- Chain 7: F.10
- Chain U: F.52, I.53, I.77, I.176
- Chain X: M.188, M.189, A.192, G.193, L.199, I.203, H.204, T.207, Y.234, M.236, A.239, N.240, W.243, I.249, A.250, F.251, L.257, F.260, F.263, V.264
- Ligands: PHO.115, CLA.135, LHG.156, CLA.184, LHG.190
27 PLIP interactions:17 interactions with chain X, 4 interactions with chain 7, 4 interactions with chain U, 2 interactions with chain 4- Hydrophobic interactions: X:M.189, X:A.192, X:L.199, X:I.203, X:T.207, X:Y.234, X:A.239, X:W.243, X:F.251, X:F.251, X:F.251, X:L.257, X:F.260, X:F.263, X:V.264, 7:F.10, 7:F.10, 7:F.10, 7:F.10, U:F.52, U:I.53, U:I.77, U:I.176, 4:L.23, 4:L.29
- Hydrogen bonds: X:T.207, X:F.251
- 18 x UNL: UNKNOWN LIGAND
UNL.14: 8 residues within 4Å:- Chain A: L.13, R.16, F.17, W.20
- Ligands: BCR.9, SQD.11, UNL.92, CLA.134
Ligand excluded by PLIPUNL.41: 6 residues within 4Å:- Chain B: W.90
- Ligands: CLA.20, CLA.21, CLA.22, CLA.32, BCR.35
Ligand excluded by PLIPUNL.70: 4 residues within 4Å:- Chain C: W.17
- Chain J: F.36
- Ligands: SQD.45, BCR.108
Ligand excluded by PLIPUNL.81: 6 residues within 4Å:- Chain D: W.22, S.23, E.121
- Chain Q: L.20
- Ligands: UNL.82, UNL.107
Ligand excluded by PLIPUNL.82: 11 residues within 4Å:- Chain B: A.227
- Chain D: D.9, K.13, W.22, R.124, L.125
- Chain Q: F.24
- Ligands: CLA.24, CLA.25, LMT.74, UNL.81
Ligand excluded by PLIPUNL.92: 9 residues within 4Å:- Chain A: L.102
- Chain H: M.1, L.4, T.7, V.11
- Ligands: BCR.9, SQD.11, UNL.14, HTG.152
Ligand excluded by PLIPUNL.93: 4 residues within 4Å:- Chain I: G.25, Y.29
- Ligands: DGD.62, LMG.64
Ligand excluded by PLIPUNL.100: 5 residues within 4Å:- Chain 4: R.7
- Chain L: I.23
- Ligands: SQD.97, LMT.99, CLA.142
Ligand excluded by PLIPUNL.107: 7 residues within 4Å:- Chain D: L.82, W.83, G.89
- Chain Q: S.15, L.20
- Ligands: CLA.76, UNL.81
Ligand excluded by PLIPUNL.124: 6 residues within 4Å:- Chain U: R.16, F.17, W.20
- Ligands: BCR.117, SQD.120, UNL.201
Ligand excluded by PLIPUNL.153: 6 residues within 4Å:- Chain V: W.90, L.148
- Ligands: CLA.132, CLA.133, CLA.134, BCR.147
Ligand excluded by PLIPUNL.181: 5 residues within 4Å:- Chain 3: F.28, F.36
- Chain W: W.17
- Ligands: SQD.118, LHG.191
Ligand excluded by PLIPUNL.192: 6 residues within 4Å:- Chain X: W.22, I.25, L.26, F.120
- Ligands: UNL.193
- Chain a: L.20
Ligand excluded by PLIPUNL.193: 9 residues within 4Å:- Chain V: A.227, R.229
- Chain X: D.9, K.13, W.22
- Ligands: CLA.136, CLA.137, LMT.148, UNL.192
Ligand excluded by PLIPUNL.201: 8 residues within 4Å:- Chain 1: M.1, T.3, L.4
- Ligands: HTG.40, CLA.116, BCR.117, SQD.120, UNL.124
Ligand excluded by PLIPUNL.202: 4 residues within 4Å:- Chain 2: G.25, Y.32
- Ligands: DGD.174, LMG.176
Ligand excluded by PLIPUNL.207: 2 residues within 4Å:- Chain 5: I.23
- Ligands: CLA.30
Ligand excluded by PLIPUNL.215: 7 residues within 4Å:- Chain X: L.82, W.83, G.89
- Ligands: CLA.186
- Chain a: S.15, G.16, L.20
Ligand excluded by PLIP- 12 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.15: 18 residues within 4Å:- Chain A: F.93, W.97, E.98, F.117, L.120, L.121
- Chain C: L.195, L.196, K.197, S.198, F.200, E.203, W.205
- Chain H: K.5, Y.9
- Ligands: CLA.8, CLA.50, DGD.61
11 PLIP interactions:6 interactions with chain A, 4 interactions with chain C, 1 interactions with chain H- Hydrophobic interactions: A:L.120, A:L.121, A:L.121, A:L.121, C:W.205
- Hydrogen bonds: A:W.97, A:E.98, C:E.203, H:Y.9
- Water bridges: C:S.198, C:S.198
LMG.64: 14 residues within 4Å:- Chain C: F.52, H.56, Q.66
- Chain I: I.21
- Chain J: D.14, V.18, V.21, L.22
- Chain R: Q.5, I.9
- Ligands: CLA.47, CLA.49, DGD.62, UNL.93
10 PLIP interactions:4 interactions with chain J, 2 interactions with chain R, 3 interactions with chain C, 1 interactions with chain I- Hydrophobic interactions: J:V.18, J:V.18, J:V.21, J:L.22, R:I.9, I:I.21
- Water bridges: R:Q.5, C:H.56
- Hydrogen bonds: C:H.56
- Salt bridges: C:H.56
LMG.65: 14 residues within 4Å:- Chain C: V.43, W.79, D.89, F.91, V.95, V.96, V.99, H.100, S.103
- Chain S: F.59, V.62
- Ligands: CLA.48, CLA.58, BCR.59
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain S- Hydrophobic interactions: C:V.43, C:W.79
- Hydrogen bonds: S:V.62
LMG.84: 18 residues within 4Å:- Chain D: L.39, Y.57, G.60, C.61, N.62, F.63
- Chain F: T.29, I.36, M.39, Q.40
- Chain I: F.27, G.30, A.31, L.35
- Ligands: CLA.6, DGD.63, BCR.77, MG.94
14 PLIP interactions:4 interactions with chain F, 6 interactions with chain D, 4 interactions with chain I- Hydrophobic interactions: F:T.29, D:L.39, D:F.63, D:F.63, D:F.63, I:F.27
- Hydrogen bonds: F:M.39, F:Q.40, D:F.63, I:G.30
- Water bridges: F:I.42, D:N.62, I:F.27, I:G.36
LMG.98: 20 residues within 4Å:- Chain B: Y.39, T.326, G.327, P.328, K.331, V.456
- Chain D: I.274
- Chain K: F.35
- Chain L: N.4, L.6, A.10, L.13, F.14
- Ligands: CLA.23, CLA.29, CLA.30, BCR.33, BCR.34, LHG.96, LMT.210
14 PLIP interactions:8 interactions with chain B, 3 interactions with chain L, 1 interactions with chain D, 2 interactions with chain K- Hydrophobic interactions: B:V.456, L:L.13, L:F.14, D:I.274, K:F.35, K:F.35
- Hydrogen bonds: B:Y.39, B:T.326, B:T.326, L:N.4
- Water bridges: B:T.326, B:T.326, B:K.331, B:K.331
LMG.109: 14 residues within 4Å:- Chain C: F.109, Y.113, R.117
- Chain S: M.19, Y.27, W.33, K.37, I.40, F.41, S.44, W.47, I.48
- Ligands: CLA.56, CLA.58
10 PLIP interactions:4 interactions with chain C, 6 interactions with chain S- Hydrophobic interactions: C:F.109, S:I.40, S:W.47, S:W.47, S:I.48
- Hydrogen bonds: C:Y.113, C:Y.113, C:R.117
- Salt bridges: S:K.37, S:K.37
LMG.126: 18 residues within 4Å:- Chain 1: K.5, Y.9
- Chain U: F.93, W.97, E.98, F.117, L.120, L.121
- Chain W: L.195, L.196, S.198, F.200, E.203, W.205, F.266
- Ligands: CLA.116, CLA.162, DGD.173
15 PLIP interactions:5 interactions with chain U, 4 interactions with chain 1, 6 interactions with chain W- Hydrophobic interactions: U:F.117, U:L.120, U:L.121, W:W.205, W:F.266
- Hydrogen bonds: U:W.97, U:E.98, 1:K.5, 1:K.5, 1:Y.9, 1:Y.9, W:E.203
- Water bridges: W:S.198, W:S.198, W:S.198
LMG.176: 15 residues within 4Å:- Chain 2: I.21
- Chain 3: D.14, V.18, V.21
- Chain W: F.52, H.56, Q.66
- Ligands: SQD.118, CLA.161, CLA.165, CLA.167, DGD.174, UNL.202
- Chain b: Q.5, I.9
7 PLIP interactions:2 interactions with chain W, 2 interactions with chain b, 3 interactions with chain 3- Water bridges: W:H.56
- Salt bridges: W:H.56
- Hydrophobic interactions: b:I.9, b:I.9, 3:V.18, 3:V.18, 3:V.21
LMG.177: 14 residues within 4Å:- Chain W: V.43, W.79, D.89, F.91, V.95, V.96, V.99, H.100, S.103
- Ligands: CLA.160, CLA.170, BCR.171, HTG.178
- Chain c: F.59
6 PLIP interactions:6 interactions with chain W- Hydrophobic interactions: W:V.43, W:W.79, W:V.96, W:V.99, W:V.99
- Water bridges: W:D.89
LMG.194: 19 residues within 4Å:- Chain 2: F.27, G.30, A.31, L.35
- Chain X: L.35, Y.57, G.60, C.61, N.62, F.63
- Chain Z: T.29, I.36, M.39, Q.40
- Ligands: CLA.114, DGD.175, CLA.185, BCR.187, MG.203
12 PLIP interactions:6 interactions with chain X, 4 interactions with chain 2, 2 interactions with chain Z- Hydrophobic interactions: X:L.35, X:F.63, X:F.63, 2:F.27
- Hydrogen bonds: X:G.60, X:F.63, 2:G.30, Z:M.39, Z:Q.40
- Water bridges: X:N.62, 2:F.27, 2:G.36
LMG.206: 18 residues within 4Å:- Chain 4: F.35
- Chain 5: N.4, L.6, A.10, L.13, F.14
- Chain V: Y.39, T.326, G.327, P.328, K.331, F.452
- Ligands: CLA.135, CLA.141, CLA.142, BCR.145, LHG.156, LHG.189
9 PLIP interactions:2 interactions with chain 4, 4 interactions with chain 5, 3 interactions with chain V- Hydrophobic interactions: 4:F.35, 4:F.35, 5:L.13, 5:F.14, V:F.452
- Hydrogen bonds: 5:N.4, V:T.326, V:T.326
- Water bridges: 5:N.4
LMG.216: 12 residues within 4Å:- Chain W: F.109, Y.113, R.117
- Ligands: CLA.168, CLA.170
- Chain c: M.19, Y.27, W.33, K.37, F.41, S.44, W.47
8 PLIP interactions:4 interactions with chain c, 4 interactions with chain W- Hydrophobic interactions: c:M.19, c:F.41, c:W.47, W:F.109, W:F.109
- Salt bridges: c:K.37
- Hydrogen bonds: W:Y.113, W:R.117
- 10 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.16: 22 residues within 4Å:- Chain A: S.232, N.234
- Chain B: W.4, Y.5, R.6, L.460, F.463, W.467, F.478
- Chain D: R.129, Y.131, I.134, W.256, F.259, F.263, T.267, M.271
- Chain K: L.23
- Ligands: CLA.23, CLA.27, CLA.29, LHG.96
17 PLIP interactions:9 interactions with chain B, 5 interactions with chain D, 2 interactions with chain A, 1 interactions with chain K- Hydrophobic interactions: B:W.4, B:Y.5, B:L.460, B:F.463, B:F.463, D:F.263, D:F.263, K:L.23
- Water bridges: B:R.6, B:R.6, B:R.6, D:Y.131
- Salt bridges: B:R.6
- Hydrogen bonds: D:R.129, D:Y.131, A:S.232, A:N.234
LHG.79: 21 residues within 4Å:- Chain D: F.247, I.249, A.250, F.251, S.252, N.253, W.256, F.260
- Chain K: N.13, T.15, S.16, Y.18, L.19, L.29
- Chain N: F.17, A.20
- Ligands: CLA.4, CLA.5, PHO.7, PL9.78, LHG.96
18 PLIP interactions:5 interactions with chain K, 11 interactions with chain D, 2 interactions with chain N- Hydrophobic interactions: K:Y.18, K:L.29, D:F.247, D:I.249, D:F.251, D:F.260, D:F.260, N:F.17, N:F.17
- Hydrogen bonds: K:N.13, K:T.15, K:S.16, D:S.252, D:S.252, D:N.253
- Water bridges: D:S.252, D:S.252, D:N.253
LHG.80: 22 residues within 4Å:- Chain A: R.140, W.142, L.200, F.273, A.276, W.284, F.285
- Chain C: F.15, W.18, W.425, R.429
- Chain D: E.209, N.210, A.219, S.220, T.221, F.222
- Ligands: SQD.45, CLA.49, CLA.53, CLA.55, DGD.63
13 PLIP interactions:3 interactions with chain D, 3 interactions with chain C, 7 interactions with chain A- Hydrogen bonds: D:N.210, D:A.219, D:T.221, C:R.429, C:R.429
- Hydrophobic interactions: C:W.18, A:W.142, A:L.200, A:A.276, A:W.284, A:F.285
- Water bridges: A:R.140
- Salt bridges: A:R.140
LHG.86: 15 residues within 4Å:- Chain A: L.258, F.260, Y.262, A.263
- Chain D: F.17
- Chain E: T.4, T.5, E.7, R.8, P.9, F.10, S.11
- Chain F: R.18
- Ligands: CLA.6, PL9.13
11 PLIP interactions:1 interactions with chain F, 1 interactions with chain D, 7 interactions with chain E, 2 interactions with chain A- Hydrogen bonds: F:R.18, E:T.4, E:T.4, E:T.5, E:E.7, E:F.10, E:S.11, A:Y.262
- Hydrophobic interactions: D:F.17, E:F.10, A:F.260
LHG.96: 22 residues within 4Å:- Chain A: S.232, N.234
- Chain B: P.3, W.4, Y.5
- Chain D: W.256, F.263
- Chain K: E.11, L.12, N.13, S.16, L.19, G.20, L.22
- Chain L: P.18
- Ligands: CLA.5, LHG.16, CLA.27, CLA.30, PL9.78, LHG.79, LMG.98
13 PLIP interactions:3 interactions with chain A, 2 interactions with chain B, 1 interactions with chain L, 3 interactions with chain D, 4 interactions with chain K- Hydrogen bonds: A:S.232, A:S.232, A:N.234, B:W.4, B:Y.5, K:E.11, K:N.13, K:S.16
- Hydrophobic interactions: L:P.18, D:W.256, D:F.263, D:F.263, K:L.22
LHG.128: 14 residues within 4Å:- Chain U: L.258, F.260, Y.262, A.263
- Chain X: F.17, V.18, F.28
- Chain Y: P.9, F.10, S.11
- Chain Z: R.18, A.21
- Ligands: CLA.114, PL9.123
11 PLIP interactions:2 interactions with chain X, 2 interactions with chain Z, 3 interactions with chain Y, 4 interactions with chain U- Hydrophobic interactions: X:F.17, X:V.18, Z:A.21, Y:F.10, U:F.260, U:F.260, U:A.263
- Hydrogen bonds: Z:R.18, Y:F.10, Y:S.11, U:Y.262
LHG.156: 23 residues within 4Å:- Chain 4: E.11, L.12, N.13, S.16, L.19, G.20
- Chain 5: V.17, P.18, F.21
- Chain U: S.232, N.234
- Chain V: P.3, W.4, Y.5
- Chain X: W.256, F.263
- Ligands: CLA.139, CLA.142, CLA.184, PL9.188, LHG.189, LHG.190, LMG.206
12 PLIP interactions:2 interactions with chain 5, 3 interactions with chain 4, 2 interactions with chain V, 3 interactions with chain U, 2 interactions with chain X- Hydrophobic interactions: 5:V.17, 5:P.18, X:F.263, X:F.263
- Hydrogen bonds: 4:E.11, 4:N.13, 4:S.16, V:W.4, V:Y.5, U:S.232, U:S.232, U:N.234
LHG.189: 22 residues within 4Å:- Chain 5: P.18
- Chain U: S.232, N.234
- Chain V: W.4, Y.5, R.6, L.460, F.463, W.467, F.478
- Chain X: R.129, Y.131, I.134, W.256, F.259, F.263, T.267
- Ligands: CLA.135, CLA.139, CLA.141, LHG.156, LMG.206
12 PLIP interactions:4 interactions with chain X, 2 interactions with chain U, 5 interactions with chain V, 1 interactions with chain 5- Hydrophobic interactions: X:F.263, X:F.263, V:W.4, V:Y.5, V:L.460, 5:P.18
- Hydrogen bonds: X:R.129, X:Y.131, U:S.232, U:N.234
- Water bridges: V:R.6
- Salt bridges: V:R.6
LHG.190: 24 residues within 4Å:- Chain 4: N.13, T.15, S.16, Y.18, L.19, L.29
- Chain 7: F.17, A.20, I.21
- Chain X: I.246, F.247, I.249, A.250, F.251, S.252, N.253, W.256, F.260
- Ligands: CLA.113, SQD.120, LHG.156, CLA.184, PL9.188, BCR.211
14 PLIP interactions:6 interactions with chain X, 4 interactions with chain 4, 4 interactions with chain 7- Hydrophobic interactions: X:I.249, X:F.251, X:F.260, 4:L.29, 7:F.17, 7:F.17, 7:A.20, 7:I.21
- Hydrogen bonds: X:S.252, X:S.252, X:N.253, 4:N.13, 4:N.13, 4:S.16
LHG.191: 20 residues within 4Å:- Chain U: R.140, W.142, V.145, A.146, F.273, F.285
- Chain W: W.18, W.425, R.429
- Chain X: E.209, N.210, A.219, S.220, T.221, F.222
- Ligands: SQD.118, CLA.161, CLA.165, CLA.167, UNL.181
13 PLIP interactions:4 interactions with chain W, 6 interactions with chain U, 3 interactions with chain X- Hydrophobic interactions: W:W.18, W:W.425, U:W.142, U:V.145, U:A.146, U:F.273, U:F.285
- Hydrogen bonds: W:R.429, W:R.429, X:N.210, X:A.219, X:T.221
- Salt bridges: U:R.140
- 11 x HTG: heptyl 1-thio-beta-D-glucopyranoside(Non-covalent)
HTG.37: 13 residues within 4Å:- Chain 6: G.110, G.111
- Chain B: L.41, S.73, W.74, S.75, W.77, E.93, L.97
- Chain U: Y.73
- Ligands: BCR.117, GOL.119, LMT.121
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:W.74, B:L.97
- Hydrogen bonds: B:S.73, B:S.75, B:E.93
HTG.38: 12 residues within 4Å:- Chain B: K.340, S.418, Y.419, K.422, F.429, E.430, F.431, T.433
- Chain M: Q.174, A.175, K.176, E.178
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain M- Hydrophobic interactions: B:Y.419
- Hydrogen bonds: B:K.340, B:K.340, B:E.430, B:F.431, M:Q.174, M:K.176, M:K.176
HTG.40: 9 residues within 4Å:- Chain B: W.74, D.86, G.88, F.89
- Chain U: I.50, L.102
- Ligands: BCR.117, GOL.119, UNL.201
4 PLIP interactions:2 interactions with chain U, 1 interactions with chain 6, 1 interactions with chain B- Hydrophobic interactions: U:I.50
- Water bridges: U:L.102, 6:K.67
- Hydrogen bonds: B:D.86
HTG.66: 4 residues within 4Å:- Chain C: W.79, F.164, G.165
- Ligands: CLA.47
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:W.79
HTG.83: 7 residues within 4Å:- Chain D: E.1, G.3, W.4, F.5
- Chain G: W.24, P.28
- Ligands: LMT.74
6 PLIP interactions:5 interactions with chain D, 1 interactions with chain G- Hydrophobic interactions: D:F.5, G:W.24
- Hydrogen bonds: D:G.3, D:G.3, D:F.5, D:D.6
HTG.106: 6 residues within 4Å:- Chain P: A.89, E.90, R.96, S.97, D.99, I.100
4 PLIP interactions:3 interactions with chain P, 1 interactions with chain C- Hydrogen bonds: P:E.90, P:D.99
- Water bridges: P:A.89, C:R.372
HTG.149: 10 residues within 4Å:- Chain A: Y.73
- Chain M: G.110, G.111
- Chain V: S.73, S.75, W.77, E.93, L.97
- Ligands: GOL.10, LMT.73
6 PLIP interactions:5 interactions with chain V, 1 interactions with chain M- Hydrophobic interactions: V:L.97
- Hydrogen bonds: V:S.73, V:S.75, V:E.93
- Water bridges: V:L.41, M:G.110
HTG.150: 3 residues within 4Å:- Chain V: W.184, I.206
- Ligands: CLA.129
4 PLIP interactions:4 interactions with chain V- Hydrophobic interactions: V:W.184, V:W.184, V:I.206
- Water bridges: V:W.184
HTG.152: 9 residues within 4Å:- Chain A: I.50, L.102
- Chain V: W.74, D.86, G.88, F.89
- Ligands: BCR.9, GOL.10, UNL.92
8 PLIP interactions:5 interactions with chain V, 3 interactions with chain A- Hydrophobic interactions: V:W.74, A:I.50
- Hydrogen bonds: V:D.86, V:D.86, V:G.88, V:G.88
- Water bridges: A:L.102, A:D.103
HTG.178: 6 residues within 4Å:- Chain W: W.79, F.163, F.164, G.165
- Ligands: CLA.159, LMG.177
1 PLIP interactions:1 interactions with chain W- Hydrogen bonds: W:W.79
HTG.198: 4 residues within 4Å:- Chain 0: W.24, P.28
- Chain X: W.4, F.5
2 PLIP interactions:1 interactions with chain X, 1 interactions with chain 0- Hydrophobic interactions: X:F.5, 0:W.24
- 14 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.44: 10 residues within 4Å:- Chain 5: M.1
- Chain 7: M.1, I.4, F.8
- Chain B: S.35, A.42
- Chain U: L.72
- Ligands: LMT.121, LMT.210, BCR.211
4 PLIP interactions:2 interactions with chain 7, 1 interactions with chain B, 1 interactions with chain U- Water bridges: 7:E.2, 7:T.3, U:L.72
- Hydrophobic interactions: B:A.42
LMT.69: 9 residues within 4Å:- Chain A: W.14, E.15
- Chain C: W.241, R.244
- Chain H: L.24, S.25, G.26, R.30
- Ligands: CLA.51
9 PLIP interactions:5 interactions with chain C, 3 interactions with chain H, 1 interactions with chain A- Hydrophobic interactions: C:W.241, C:W.241
- Hydrogen bonds: C:R.244, C:R.244, H:R.30, A:W.14
- Water bridges: C:R.244, H:G.26, H:R.30
LMT.73: 8 residues within 4Å:- Chain A: L.72, Y.73
- Chain D: R.294
- Chain M: G.110
- Chain V: L.38, A.42
- Ligands: HTG.149, LMT.154
7 PLIP interactions:2 interactions with chain V, 2 interactions with chain M, 3 interactions with chain D- Hydrophobic interactions: V:L.38
- Hydrogen bonds: V:A.42, M:G.110, D:R.294, D:R.294
- Water bridges: M:G.111, D:D.298
LMT.74: 14 residues within 4Å:- Chain B: R.223, K.226, K.497, D.500
- Chain D: R.2, F.5, D.6, D.9, D.10
- Chain G: W.24, M.34
- Chain Q: R.38
- Ligands: UNL.82, HTG.83
10 PLIP interactions:6 interactions with chain B, 2 interactions with chain D, 1 interactions with chain Q, 1 interactions with chain G- Hydrogen bonds: B:K.226, B:K.226, B:K.497, B:D.500, D:R.2, D:D.9, Q:R.38
- Salt bridges: B:R.223, B:K.497
- Hydrophobic interactions: G:W.24
LMT.87: 4 residues within 4Å:- Chain E: F.31, W.35, S.39
- Chain F: F.41
3 PLIP interactions:2 interactions with chain E, 1 interactions with chain F- Hydrophobic interactions: E:F.31, E:W.35, F:F.41
LMT.99: 13 residues within 4Å:- Chain 4: R.7, P.9, V.10
- Chain 5: I.24, Q.28, Q.32
- Chain L: V.27, E.30, S.31, Q.32, Q.33
- Ligands: UNL.100, CLA.142
8 PLIP interactions:2 interactions with chain 5, 3 interactions with chain L, 3 interactions with chain 4- Hydrophobic interactions: 5:I.24
- Hydrogen bonds: 5:Q.28, L:Q.33, 4:R.7, 4:V.10, 4:V.10
- Water bridges: L:E.30, L:E.30
LMT.101: 9 residues within 4Å:- Chain 5: L.6
- Chain L: M.1, Q.5, A.12
- Chain N: I.4, F.8
- Chain V: Y.39
- Ligands: CLA.142, LMT.154
5 PLIP interactions:1 interactions with chain V, 2 interactions with chain N, 2 interactions with chain L- Hydrogen bonds: V:Y.39, L:Q.5
- Hydrophobic interactions: N:I.4, N:F.8, L:A.12
LMT.121: 8 residues within 4Å:- Chain B: L.41, A.42
- Chain U: I.53, L.72, Y.73
- Chain X: R.294
- Ligands: HTG.37, LMT.44
6 PLIP interactions:2 interactions with chain X, 3 interactions with chain U, 1 interactions with chain B- Hydrogen bonds: X:R.294, X:R.294, U:L.72
- Hydrophobic interactions: U:I.53, U:L.72
- Water bridges: B:F.44
LMT.127: 10 residues within 4Å:- Chain 1: L.24, S.25, G.26, R.30
- Chain U: N.12, W.14, E.15
- Chain W: W.241, R.244
- Ligands: CLA.163
7 PLIP interactions:2 interactions with chain 1, 3 interactions with chain W, 2 interactions with chain U- Hydrogen bonds: 1:S.25, 1:R.30, W:R.244, W:R.244, U:N.12, U:E.15
- Hydrophobic interactions: W:W.241
LMT.148: 11 residues within 4Å:- Chain 0: W.24, A.31, M.34
- Chain V: R.223, K.226, A.227, K.497, D.500
- Chain X: D.6, D.9
- Ligands: UNL.193
9 PLIP interactions:6 interactions with chain V, 2 interactions with chain 0, 1 interactions with chain X- Hydrophobic interactions: V:A.227, 0:W.24, 0:A.31
- Hydrogen bonds: V:R.223, V:K.226, X:D.6
- Water bridges: V:K.497
- Salt bridges: V:R.223, V:K.226
LMT.154: 7 residues within 4Å:- Chain N: M.1, I.4, V.7
- Chain V: A.42, T.43
- Ligands: LMT.73, LMT.101
5 PLIP interactions:1 interactions with chain A, 4 interactions with chain N- Water bridges: A:G.74
- Hydrophobic interactions: N:I.4, N:V.7
- Hydrogen bonds: N:T.3, N:T.3
LMT.195: 5 residues within 4Å:- Chain Y: W.35, S.39
- Chain Z: F.41, I.42, Q.43
3 PLIP interactions:1 interactions with chain Y, 2 interactions with chain Z- Hydrophobic interactions: Y:W.35, Z:F.41
- Hydrogen bonds: Z:Q.43
LMT.208: 13 residues within 4Å:- Chain 5: V.27, E.30, S.31, Q.32, Q.33, K.34
- Chain K: P.9, V.10
- Chain L: V.20, I.24, Q.28, Q.32
- Ligands: CLA.30
9 PLIP interactions:2 interactions with chain K, 4 interactions with chain L, 3 interactions with chain 5- Hydrogen bonds: K:V.10, K:V.10, L:Q.28, L:Q.32, 5:Q.32, 5:K.34, 5:K.34
- Hydrophobic interactions: L:V.20, L:I.24
LMT.210: 10 residues within 4Å:- Chain 5: L.8, A.12
- Chain 7: M.1, I.4, F.8
- Chain B: Y.39
- Chain L: L.6
- Ligands: BCR.33, LMT.44, LMG.98
6 PLIP interactions:4 interactions with chain 7, 2 interactions with chain 5- Hydrophobic interactions: 7:I.4, 7:F.8, 5:L.8, 5:A.12
- Water bridges: 7:E.2, 7:E.2
- 8 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.61: 29 residues within 4Å:- Chain A: L.91, S.148, A.152, F.155, I.160, I.163
- Chain C: P.199, G.201, G.202, E.203, G.204, W.205, V.207, S.208, V.209, N.210, C.270, F.274, N.275, N.276, T.277, D.342, F.343, R.344, F.417, L.420
- Ligands: CLA.8, LMG.15, CLA.51
18 PLIP interactions:3 interactions with chain A, 15 interactions with chain C- Hydrophobic interactions: A:A.152, A:F.155, A:I.163, C:P.199, C:W.205, C:V.207, C:F.417
- Hydrogen bonds: C:G.202, C:N.276, C:N.276, C:T.277, C:T.277, C:D.342, C:D.342, C:R.344, C:R.344
- Water bridges: C:F.200, C:N.210
DGD.62: 19 residues within 4Å:- Chain A: F.197
- Chain C: E.65, Q.66, G.67, L.386, S.388, N.400, F.401, V.402, W.407, T.410, S.411
- Chain I: F.28, Y.32
- Ligands: CLA.49, CLA.53, DGD.63, LMG.64, UNL.93
18 PLIP interactions:14 interactions with chain C, 1 interactions with chain A, 3 interactions with chain I- Hydrophobic interactions: C:L.386, C:W.407, A:F.197, I:F.28, I:F.28
- Hydrogen bonds: C:S.388, C:N.400, C:N.400, C:V.402, C:V.402
- Water bridges: C:K.61, C:K.61, C:Y.64, C:E.65, C:E.65, C:G.67, C:N.400, I:Y.32
DGD.63: 27 residues within 4Å:- Chain A: Q.199, L.200, F.285, F.300, N.301, F.302, S.305
- Chain C: L.386, N.387, S.388, V.389, N.397, S.398, V.399, N.400
- Chain I: F.28, A.31, Y.32, G.36, S.37, S.38
- Chain P: Q.34
- Ligands: CLA.6, CLA.49, DGD.62, LHG.80, LMG.84
15 PLIP interactions:5 interactions with chain A, 5 interactions with chain C, 2 interactions with chain P, 3 interactions with chain I- Hydrophobic interactions: A:Q.199, A:L.200, A:F.285, A:F.300
- Hydrogen bonds: A:S.305, C:N.387, C:N.397, C:S.398, C:V.399, P:Q.34, P:Q.34, I:G.36, I:S.38
- Water bridges: C:N.400, I:G.36
DGD.91: 22 residues within 4Å:- Chain B: Y.192, F.249, G.253, Y.257, Y.272, Q.273, S.276, F.462
- Chain D: G.76, H.77, I.113, I.149, L.152, G.153
- Chain G: L.45, Y.48, N.49, V.59, S.60, W.61
- Ligands: CLA.18, CLA.24
17 PLIP interactions:7 interactions with chain G, 6 interactions with chain D, 4 interactions with chain B- Hydrophobic interactions: G:Y.48, G:Y.48, G:Y.48, D:I.113, D:I.149, D:L.152, B:F.462
- Hydrogen bonds: G:N.49, G:V.59, G:S.60, G:W.61, D:H.77, D:S.155, B:Y.192, B:Y.192, B:Y.272
- Water bridges: D:G.76
DGD.173: 31 residues within 4Å:- Chain U: L.91, L.151, A.152, F.155, I.163
- Chain W: P.199, F.200, G.201, G.202, E.203, G.204, W.205, V.207, S.208, V.209, N.210, M.263, F.266, C.270, F.274, N.275, N.276, T.277, D.342, F.343, R.344, L.420
- Ligands: CLA.116, LMG.126, CLA.162, CLA.163
23 PLIP interactions:20 interactions with chain W, 3 interactions with chain U- Hydrophobic interactions: W:P.199, W:P.199, W:F.200, W:W.205, W:V.207, W:F.266, W:F.266, W:L.420, U:L.151, U:F.155, U:F.155
- Hydrogen bonds: W:G.202, W:N.276, W:N.276, W:T.277, W:T.277, W:T.277, W:D.342, W:D.342, W:R.344, W:R.344
- Water bridges: W:F.200, W:N.210
DGD.174: 21 residues within 4Å:- Chain 2: F.28, Y.32
- Chain U: H.195, F.197, L.297
- Chain W: E.65, Q.66, G.67, L.386, S.388, N.400, F.401, V.402, W.407, T.410, S.411
- Ligands: CLA.161, CLA.165, DGD.175, LMG.176, UNL.202
15 PLIP interactions:2 interactions with chain 2, 3 interactions with chain U, 10 interactions with chain W- Hydrophobic interactions: 2:F.28, U:F.197, U:F.197, U:L.297, W:L.386
- Water bridges: 2:Y.32, W:E.65, W:Q.66, W:G.67, W:G.67
- Hydrogen bonds: W:S.388, W:N.400, W:N.400, W:V.402, W:V.402
DGD.175: 25 residues within 4Å:- Chain 2: F.28, A.31, Y.32, G.36, S.37, S.38
- Chain 9: Q.34
- Chain U: Q.199, L.200, F.300, N.301, F.302, S.305
- Chain W: N.387, S.388, V.389, N.397, S.398, V.399, N.400
- Ligands: CLA.114, CLA.161, CLA.165, DGD.174, LMG.194
13 PLIP interactions:3 interactions with chain 2, 4 interactions with chain W, 2 interactions with chain 9, 4 interactions with chain U- Hydrogen bonds: 2:G.36, 2:S.38, W:N.387, W:N.397, W:S.398, W:V.399, 9:Q.34, 9:Q.34, U:S.305
- Water bridges: 2:G.36
- Hydrophobic interactions: U:Q.199, U:L.200, U:L.200
DGD.200: 24 residues within 4Å:- Chain 0: L.45, Y.48, N.49, V.59, S.60, W.61
- Chain V: Y.192, F.249, Y.257, Y.272, Q.273, S.276, Y.278, F.462
- Chain X: G.76, H.77, I.113, I.149, L.152, G.153, S.155, L.281
- Ligands: CLA.130, CLA.136
15 PLIP interactions:7 interactions with chain 0, 4 interactions with chain X, 4 interactions with chain V- Hydrophobic interactions: 0:Y.48, 0:Y.48, X:I.149, X:L.281, V:F.249, V:Y.257, V:F.462
- Hydrogen bonds: 0:N.49, 0:V.59, 0:S.60, X:H.77, X:S.155, V:Y.192
- Water bridges: 0:S.60, 0:S.60
- 7 x CA: CALCIUM ION(Non-covalent)
CA.68: 6 residues within 4Å:- Chain C: N.137, T.140, T.141, H.233, I.234, T.236
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:T.140, C:T.141, C:H.233, C:T.236
CA.89: 2 residues within 4Å:- Chain F: R.44
- Chain P: E.23
No protein-ligand interaction detected (PLIP)CA.102: 6 residues within 4Å:- Chain M: T.136, S.137, T.138, D.139, N.198, V.199
No protein-ligand interaction detected (PLIP)CA.179: 6 residues within 4Å:- Chain W: N.137, T.140, T.141, H.233, I.234, T.236
5 PLIP interactions:5 interactions with chain W- Metal complexes: W:N.137, W:T.140, W:T.141, W:H.233, W:T.236
CA.180: 5 residues within 4Å:- Chain W: F.4, T.6, D.9, E.11, S.12
5 PLIP interactions:5 interactions with chain W- Metal complexes: W:F.4, W:T.6, W:D.9, W:D.9, W:E.11
CA.209: 3 residues within 4Å:- Chain 6: T.136, N.198, V.199
3 PLIP interactions:2 interactions with chain 6, 1 Ligand-Water interactions- Metal complexes: 6:T.136, 6:V.199, H2O.71
CA.212: 3 residues within 4Å:- Chain 9: E.23
- Chain U: A.309
- Chain Z: R.44
2 PLIP interactions:1 interactions with chain 9, 1 Ligand-Water interactions- Metal complexes: 9:E.23, H2O.68
- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.71: 10 residues within 4Å:- Chain A: H.215, E.244, Y.246, H.272
- Chain D: H.204, V.208, Y.234, K.254, H.258
- Ligands: FE2.1
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain D- Hydrogen bonds: A:H.215, D:Y.234, D:Y.234
BCT.183: 9 residues within 4Å:- Chain U: H.215, V.219, E.244, Y.246, H.272
- Chain X: H.204, Y.234, H.258
- Ligands: FE2.110
2 PLIP interactions:1 interactions with chain U, 1 interactions with chain X- Hydrogen bonds: U:H.215, X:Y.234
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.88: 17 residues within 4Å:- Chain E: F.10, I.13, R.18, Y.19, H.23, T.26, I.27, L.30
- Chain F: I.14, R.18, W.19, V.22, H.23, A.26, I.30
- Chain T: A.18, I.22
20 PLIP interactions:11 interactions with chain F, 7 interactions with chain E, 2 interactions with chain T,- Hydrophobic interactions: F:I.14, F:W.19, F:V.22, F:A.26, F:I.30, E:I.13, E:I.27, T:A.18, T:I.22
- Water bridges: F:I.14, F:R.18, E:R.8
- Salt bridges: F:R.18, E:R.8, E:R.18
- pi-Stacking: F:W.19, F:W.19, E:Y.19
- Metal complexes: F:H.23, E:H.23
HEM.196: 15 residues within 4Å:- Chain Y: F.10, I.13, R.18, Y.19, I.22, H.23, T.26, I.27
- Chain Z: R.18, W.19, V.22, H.23, A.26, V.27, I.30
18 PLIP interactions:10 interactions with chain Y, 8 interactions with chain Z,- Hydrophobic interactions: Y:F.10, Y:I.13, Y:I.22, Y:T.26, Y:I.27, Y:I.27, Z:V.22, Z:A.26, Z:I.30
- Water bridges: Y:Y.19, Z:R.18
- Salt bridges: Y:R.18, Z:R.18
- pi-Stacking: Y:Y.19, Z:W.19, Z:W.19
- Metal complexes: Y:H.23, Z:H.23
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.94: 5 residues within 4Å:- Chain I: G.30, A.33, G.34, L.35
- Ligands: LMG.84
4 PLIP interactions:3 interactions with chain I, 1 Ligand-Water interactions- Metal complexes: I:G.30, I:A.33, I:L.35, H2O.27
MG.203: 5 residues within 4Å:- Chain 2: G.30, A.33, G.34, L.35
- Ligands: LMG.194
4 PLIP interactions:3 interactions with chain 2, 1 Ligand-Water interactions- Metal complexes: 2:G.30, 2:A.33, 2:L.35, H2O.68
- 2 x HEC: HEME C(Covalent)
HEC.105: 24 residues within 4Å:- Chain P: A.36, C.37, S.39, C.40, H.41, T.46, T.48, N.49, L.52, D.53, L.54, T.58, L.59, L.72, Y.75, M.76, T.81, Y.82, I.88, H.92, P.93, M.104, I.115, I.119
20 PLIP interactions:20 interactions with chain P,- Hydrophobic interactions: P:A.36, P:T.46, P:N.49, P:L.52, P:L.54, P:L.72, P:Y.75, P:Y.75, P:Y.75, P:I.88, P:P.93, P:I.115, P:I.119
- Hydrogen bonds: P:D.53, P:Y.82
- Water bridges: P:N.49, P:Y.75
- pi-Stacking: P:Y.75
- Metal complexes: P:H.41, P:H.92
HEC.214: 23 residues within 4Å:- Chain 9: A.36, C.37, S.39, C.40, H.41, T.46, T.48, L.52, D.53, L.54, T.58, L.59, L.72, Y.75, M.76, T.81, Y.82, I.88, H.92, P.93, M.104, I.115, I.119
17 PLIP interactions:17 interactions with chain 9,- Hydrophobic interactions: 9:T.46, 9:L.52, 9:L.54, 9:L.59, 9:L.72, 9:Y.75, 9:I.88, 9:P.93, 9:I.115, 9:I.119
- Hydrogen bonds: 9:D.53, 9:Y.82
- Water bridges: 9:N.49, 9:Y.75
- pi-Stacking: 9:Y.75
- Metal complexes: 9:H.41, 9:H.92
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, H. et al., Capturing structural changes of the S 1 to S 2 transition of photosystem II using time-resolved serial femtosecond crystallography. Iucrj (2021)
- Release Date
- 2021-04-28
- Peptides
- Photosystem II protein D1: AU
Photosystem II CP47 reaction center protein: BV
Photosystem II CP43 reaction center protein: CW
Photosystem II D2 protein: DX
Cytochrome b559 subunit alpha: EY
Cytochrome b559 subunit beta: FZ
Photosystem II reaction center protein H: G0
Photosystem II reaction center protein I: H1
Photosystem II reaction center protein J: I2
Photosystem II reaction center protein K: J3
Photosystem II reaction center protein L: K4
Photosystem II reaction center protein M: L5
Photosystem II manganese-stabilizing polypeptide: M6
Photosystem II reaction center protein T: N7
Photosystem II 12 kDa extrinsic protein: O8
Cytochrome c-550: P9
Photosystem II reaction center protein X: Qa
Photosystem II reaction center protein Ycf12: Rb
Photosystem II reaction center protein Z: Sc
Photosystem II protein Y: T - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AU
aB
BV
bC
CW
cD
DX
dE
EY
eF
FZ
fG
H0
hH
I1
iI
J2
jJ
K3
kK
L4
lL
M5
mM
O6
oN
T7
tO
U8
uP
V9
vQ
Xa
xR
Yb
yS
Zc
zT
R - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 7cji.1
Photosystem II structure in the S1 state
Photosystem II protein D1
Toggle Identical (AU)Photosystem II CP47 reaction center protein
Toggle Identical (BV)Photosystem II CP43 reaction center protein
Photosystem II D2 protein
Cytochrome b559 subunit alpha
Cytochrome b559 subunit beta
Photosystem II reaction center protein H
Toggle Identical (G0)Photosystem II reaction center protein I
Toggle Identical (H1)Photosystem II reaction center protein J
Photosystem II reaction center protein K
Toggle Identical (J3)Photosystem II reaction center protein L
Toggle Identical (K4)Photosystem II reaction center protein M
Photosystem II manganese-stabilizing polypeptide
Toggle Identical (M6)Photosystem II reaction center protein T
Toggle Identical (N7)Photosystem II 12 kDa extrinsic protein
Cytochrome c-550
Toggle Identical (P9)Photosystem II reaction center protein X
Toggle Identical (Qa)Photosystem II reaction center protein Ycf12
Toggle Identical (Rb)Photosystem II reaction center protein Z
Toggle Identical (Sc)Photosystem II protein Y
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1izl.1 | 1mz4.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 more...less...5b66.1 | 5e79.1 | 5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kaf.1 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1 | 9evx.1