- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.27 Å
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 2 x FE2: FE (II) ION(Non-covalent)
- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.2: 36 residues within 4Å:- Chain A: F.119, A.123, Y.147, P.150, L.151, S.153, A.154, A.156, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, A.287, I.290
- Chain D: L.182, L.183, V.204, L.205, F.257
- Chain O: F.17
- Ligands: CLA.3, PHO.4, CLA.63, CLA.64, LHG.70
16 PLIP interactions:13 interactions with chain A, 3 interactions with chain D,- Hydrophobic interactions: A:P.150, A:M.183, A:F.186, A:Q.187, A:I.192, A:L.193, A:F.206, A:F.206, A:T.286, A:I.290, D:L.182, D:L.182, D:L.205
- Hydrogen bonds: A:T.286
- Water bridges: A:I.290
- Metal complexes: A:H.198
CLA.3: 32 residues within 4Å:- Chain A: L.193, H.198, Q.199, V.202, A.203, F.206, G.207, L.210, F.211, F.260, W.278
- Chain D: L.45, F.73, L.74, V.152, F.153, V.156, F.157, F.173, V.175, I.178, F.179, F.181, L.182
- Chain F: L.26
- Ligands: CLA.2, PL9.8, LHG.11, DGD.56, PHO.61, CLA.63, LMG.68
11 PLIP interactions:5 interactions with chain D, 5 interactions with chain A, 1 Ligand-Water interactions- Hydrophobic interactions: D:I.178, D:F.179, D:F.181, D:L.182, D:L.182, A:V.202, A:L.210, A:F.211, A:W.278
- pi-Stacking: A:F.206
- Metal complexes: H2O.4
CLA.5: 29 residues within 4Å:- Chain A: V.35, I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, W.105, Q.113, L.114, F.117, H.118, L.121
- Chain H: L.4, V.8, Y.9, V.11, V.12, T.13, F.15, V.16, L.17
- Ligands: LMG.9, DGD.13, CLA.43, BCR.79, STE.80
18 PLIP interactions:14 interactions with chain A, 4 interactions with chain H,- Hydrophobic interactions: A:I.36, A:P.39, A:T.40, A:F.93, A:P.95, A:I.96, A:W.97, A:W.97, A:L.114, A:F.117, A:L.121, H:V.11, H:V.12, H:F.15, H:F.15
- Hydrogen bonds: A:I.96
- Salt bridges: A:H.118
- Metal complexes: A:H.118
CLA.14: 35 residues within 4Å:- Chain B: E.184, W.185, G.189, F.190, P.192, G.197, V.198, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250, V.251, T.255
- Chain D: V.154, L.158, I.159, L.162
- Chain G: F.38, F.41, L.42, I.45, L.46, Y.49
- Ligands: CLA.15, CLA.17, CLA.20, CLA.21, CLA.75, BCR.76, DGD.77, STE.78
21 PLIP interactions:14 interactions with chain B, 5 interactions with chain G, 2 interactions with chain D,- Hydrophobic interactions: B:W.185, B:F.190, B:F.190, B:A.200, B:H.201, B:A.204, B:A.205, B:V.208, B:F.246, B:F.247, B:F.247, B:F.250, B:F.250, G:F.38, G:F.41, G:I.45, G:L.46, D:L.158, D:I.159
- Metal complexes: B:H.201
- pi-Stacking: G:F.41
CLA.15: 30 residues within 4Å:- Chain B: R.68, L.69, A.146, L.149, C.150, F.153, L.158, M.166, V.198, H.201, H.202, A.205, A.244, F.247, A.248, V.251, V.252, T.262
- Chain G: M.35, F.38, L.39, L.42
- Ligands: CLA.14, CLA.16, CLA.17, CLA.18, CLA.20, CLA.21, CLA.22, BCR.76
14 PLIP interactions:13 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: B:L.149, B:F.153, B:F.153, B:F.247, B:F.247, B:A.248, B:V.252, G:L.42
- Hydrogen bonds: B:R.68, B:R.68
- Salt bridges: B:R.68
- pi-Stacking: B:F.153
- pi-Cation interactions: B:H.201
- Metal complexes: B:H.202
CLA.16: 30 residues within 4Å:- Chain B: W.33, F.61, V.62, F.65, R.68, L.145, L.148, L.149, V.245, F.246, A.248, A.249, V.252, M.256, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.15, CLA.17, CLA.18, CLA.19, CLA.22, CLA.23, CLA.24, CLA.25, CLA.27, BCR.30, STE.32
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:W.33, B:F.61, B:F.65, B:V.245, B:A.248, B:A.249, B:V.252, B:F.458, B:F.458, B:F.458, B:F.462, B:F.462
- Salt bridges: B:R.68
- Metal complexes: B:H.455
CLA.17: 36 residues within 4Å:- Chain B: T.27, V.30, A.31, W.33, A.34, M.37, A.38, V.62, F.65, M.66, R.68, L.69, V.71, V.96, H.100, L.103, L.107, L.143, A.146, G.147, C.150, A.205, G.206, V.208, G.209
- Ligands: CLA.14, CLA.15, CLA.16, CLA.18, CLA.21, CLA.22, CLA.24, CLA.25, CLA.27, BCR.31, STE.32
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:T.27, B:V.30, B:A.31, B:W.33, B:A.34, B:L.69, B:V.96, B:L.103
- Hydrogen bonds: B:M.66
- Water bridges: B:R.68
- Salt bridges: B:R.68
- Metal complexes: B:H.100
CLA.18: 26 residues within 4Å:- Chain B: L.69, G.70, V.71, F.90, W.91, V.96, L.98, A.99, H.100, V.102, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.15, CLA.16, CLA.17, BCR.31, STE.32, SQD.185
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:L.69, B:L.69, B:V.71, B:F.90, B:W.91, B:W.91, B:A.99, B:V.102, B:L.103, B:L.106, B:L.149, B:F.156, B:F.162, B:F.162
- Salt bridges: B:H.100
- Metal complexes: B:H.157
CLA.19: 39 residues within 4Å:- Chain B: W.33, M.37, Y.40, E.41, T.44, Q.58, G.59, M.60, F.61, L.324, F.325, T.327, G.328, P.329, P.447, W.450, F.451, F.453, A.454, H.455, F.458
- Chain D: F.196, M.199, T.277, M.281
- Chain K: L.23, L.27, F.31, F.35
- Chain L: F.14
- Ligands: CLA.16, CLA.25, BCR.29, BCR.30, STE.36, PL9.67, LHG.73, LMG.87, BCR.184
10 PLIP interactions:9 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:F.61, B:F.61, B:F.325, B:W.450, B:A.454
- Hydrogen bonds: B:Y.40, B:G.328
- Water bridges: B:W.450
- pi-Stacking: B:F.61
- Metal complexes: H2O.9
CLA.20: 37 residues within 4Å:- Chain B: L.229, T.236, S.239, S.240, A.243, A.244, F.246, F.247, F.463, H.466, I.467, G.470, A.471, T.473, L.474
- Chain D: L.36, L.89, L.91, L.116, F.120, I.123, M.126, L.127, F.130, I.150
- Chain G: L.39, L.43, L.46, E.47
- Ligands: CLA.14, CLA.15, CLA.21, CLA.22, LMG.33, CLA.65, DGD.77, STE.95
18 PLIP interactions:9 interactions with chain D, 7 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: D:L.36, D:L.89, D:F.120, D:I.123, D:I.123, D:M.126, D:L.127, D:F.130, D:I.150, B:A.243, B:F.247, B:F.463, B:F.463, B:I.467, B:L.474, G:L.39, G:L.43
- Metal complexes: B:H.466
CLA.21: 37 residues within 4Å:- Chain B: F.139, L.143, V.208, I.211, A.212, F.215, H.216, V.219, R.220, P.221, P.222, L.225, L.229, M.231, F.247
- Chain D: F.120, I.123
- Chain G: T.27, T.28, L.30, M.31, F.34, M.35, L.39, L.42, L.43, L.46
- Ligands: CLA.14, CLA.15, CLA.17, CLA.20, CLA.22, LMG.33, LMG.72, BCR.76, DGD.77, STE.78
12 PLIP interactions:4 interactions with chain G, 8 interactions with chain B,- Hydrophobic interactions: G:M.31, G:F.34, G:L.42, B:F.139, B:F.139, B:V.208, B:A.212, B:F.215, B:F.215
- Hydrogen bonds: G:T.27
- Salt bridges: B:H.216
- Metal complexes: B:H.216
CLA.22: 28 residues within 4Å:- Chain B: L.19, H.23, L.135, P.136, M.138, F.139, H.142, L.143, L.145, A.146, L.149, L.229, M.231, I.234, T.236, V.237, S.240, S.241, A.244, V.245
- Ligands: CLA.15, CLA.16, CLA.17, CLA.20, CLA.21, CLA.24, CLA.27, BCR.76
9 PLIP interactions:8 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:L.135, B:F.139, B:L.145, B:A.146, B:L.229, B:I.234, B:V.237, B:A.244
- Metal complexes: H2O.8
CLA.23: 26 residues within 4Å:- Chain B: W.5, Y.6, R.7, V.8, H.9, T.10, I.13, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472, F.479
- Chain L: F.21
- Ligands: CLA.16, CLA.24, CLA.25, CLA.26, BCR.30, LHG.73, LHG.85
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:V.8, B:T.10, B:L.238, B:L.238, B:I.242, B:F.462, B:F.464
- Hydrogen bonds: B:H.9, B:W.468
- Salt bridges: B:H.9, B:R.472
- pi-Stacking: B:W.468
- Metal complexes: B:H.469
CLA.24: 25 residues within 4Å:- Chain B: H.9, T.10, L.12, I.13, L.19, A.22, H.23, H.26, T.27, V.30, I.234, E.235, V.237, L.238, S.241, I.242, V.245, A.248
- Ligands: CLA.16, CLA.17, CLA.22, CLA.23, CLA.25, CLA.26, CLA.27
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:H.9, B:L.12, B:L.12, B:I.13, B:L.19, B:H.23, B:H.26, B:T.27, B:I.234, B:I.234, B:V.237, B:L.238
- Hydrogen bonds: B:S.241
- Salt bridges: B:H.23
- Metal complexes: B:H.23
CLA.25: 21 residues within 4Å:- Chain B: H.9, H.26, L.29, V.30, W.33, V.245, F.458, L.461, F.462
- Chain L: F.14
- Ligands: CLA.16, CLA.17, CLA.19, CLA.23, CLA.24, CLA.26, BCR.29, BCR.30, LHG.73, LHG.85, LMG.87
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:V.30, B:V.30, B:W.33, B:W.33, B:L.461, B:F.462
- Salt bridges: B:H.9
- Metal complexes: B:H.26
CLA.26: 30 residues within 4Å:- Chain 5: L.16
- Chain 8: F.8
- Chain B: L.3, V.8, H.9, V.11, L.12, A.22, M.25, H.26, L.29, W.115
- Chain K: R.7, Q.8, V.10
- Chain L: L.13, V.17, F.21, L.25
- Ligands: CLA.23, CLA.24, CLA.25, BCR.29, SQD.34, STE.36, LHG.85, STE.86, LMG.87, STE.88, BCR.184
12 PLIP interactions:7 interactions with chain B, 2 interactions with chain L, 1 interactions with chain 8, 2 interactions with chain K,- Hydrophobic interactions: B:V.8, B:V.8, B:L.12, B:M.25, B:L.29, B:W.115, L:F.21, L:L.25, 8:F.8
- Metal complexes: B:H.9
- Water bridges: K:R.7
- Salt bridges: K:R.7
CLA.27: 26 residues within 4Å:- Chain B: P.16, L.19, I.20, H.23, L.24, T.27, L.103, L.107, L.122, F.123, L.133, M.138, I.141, H.142, L.145
- Chain G: L.7, L.11, L.14, N.15
- Ligands: CLA.16, CLA.17, CLA.22, CLA.24, CLA.28, BCR.31, STE.32
10 PLIP interactions:6 interactions with chain B, 4 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.122, B:I.141, B:I.141, B:L.145, G:L.7, G:L.11, G:L.11, G:L.14
- Metal complexes: B:H.142
CLA.28: 16 residues within 4Å:- Chain B: I.20, L.24, L.107, A.110, W.113, H.114, L.120, L.122, F.123
- Chain G: T.5, L.7, G.8, L.11
- Ligands: CLA.27, BCR.31, SQD.185
12 PLIP interactions:9 interactions with chain B, 3 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.24, B:A.110, B:W.113, B:W.113, B:L.120, B:L.122, G:L.11
- pi-Stacking: B:W.113
- Metal complexes: B:H.114
- Hydrogen bonds: G:T.5
- Water bridges: G:L.7
CLA.39: 29 residues within 4Å:- Chain C: T.82, L.83, L.156, G.159, A.160, L.163, L.173, W.211, I.212, V.215, V.221, H.225, I.228, C.232, A.266, M.269, M.270, I.273, A.274, F.277, V.284, Y.285
- Ligands: CLA.40, CLA.41, CLA.43, CLA.44, CLA.45, CLA.50, BCR.52
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:L.156, C:A.160, C:L.163, C:I.228, C:A.266, C:I.273, C:F.277, C:V.284
- Hydrogen bonds: C:Y.285
- Metal complexes: C:H.225
CLA.40: 32 residues within 4Å:- Chain C: W.51, I.75, L.76, H.79, L.83, W.85, G.159, L.162, L.163, A.165, K.166, F.170, L.267, S.268, M.270, G.271, A.274, T.275, V.278, Y.285, L.414, H.418, L.421, A.422, F.425
- Ligands: CLA.39, CLA.41, CLA.42, CLA.47, CLA.48, CLA.50, LMG.96
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:W.51, C:L.83, C:W.85, C:K.166, C:F.170, C:F.170, C:L.267, C:A.274, C:L.414, C:F.425
- Salt bridges: C:H.79, C:H.418
- Metal complexes: C:H.418
CLA.41: 25 residues within 4Å:- Chain C: A.45, I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106, L.113, L.162, L.267, M.270
- Ligands: CLA.39, CLA.40, CLA.45, CLA.47, CLA.48, CLA.50, CLA.51, STE.58
5 PLIP interactions:5 interactions with chain C,- Hydrophobic interactions: C:V.49, C:A.52, C:V.102
- Salt bridges: C:H.79
- Metal complexes: C:H.106
CLA.42: 31 residues within 4Å:- Chain A: F.197, F.285
- Chain C: W.51, M.55, F.58, E.59, H.62, Q.72, G.73, L.74, I.75, L.392, P.410, W.413, L.414, S.417, H.418, V.420, L.421, F.424
- Chain J: P.26, V.27, P.29, V.30
- Ligands: CLA.40, CLA.46, CLA.48, DGD.55, DGD.56, LHG.71, LMG.96
11 PLIP interactions:2 interactions with chain J, 8 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: J:P.26, J:V.30, C:W.51, C:F.58, C:F.58, C:I.75, C:I.75, C:W.413, C:W.413, C:V.420
- Metal complexes: H2O.13
CLA.43: 33 residues within 4Å:- Chain A: F.33, I.36, L.121, S.124, C.125, M.127, G.128, W.131
- Chain C: F.252, I.253, A.258, S.261, Y.262, G.265, A.266, M.269, L.426, H.429, L.430, A.433, G.434, A.436, R.437
- Chain H: V.12, V.16, F.19, F.23
- Ligands: CLA.5, LMG.9, CLA.39, CLA.45, BCR.52, DGD.54
14 PLIP interactions:8 interactions with chain C, 3 interactions with chain A, 3 interactions with chain H,- Hydrophobic interactions: C:Y.262, C:Y.262, C:L.426, C:L.430, A:F.33, A:W.131, A:W.131, H:V.16, H:V.16, H:F.23
- Water bridges: C:I.253, C:R.437
- Salt bridges: C:R.437
- Metal complexes: C:H.429
CLA.44: 27 residues within 4Å:- Chain C: T.146, L.149, L.153, L.201, L.202, W.211, I.231, C.232, A.234, G.235, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252, W.254, M.269
- Chain H: L.24
- Ligands: LMG.9, CLA.39, CLA.45, BCR.52, DGD.54
8 PLIP interactions:8 interactions with chain C,- Hydrophobic interactions: C:L.149, C:L.153, C:L.153, C:I.231, C:W.238, C:W.247
- Hydrogen bonds: C:F.245
- Metal complexes: C:H.239
CLA.45: 26 residues within 4Å:- Chain C: K.142, M.145, T.146, I.148, L.149, H.152, L.153, L.156, I.228, I.231, C.232, W.247, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.39, CLA.41, CLA.43, CLA.44, CLA.47, BCR.52
13 PLIP interactions:12 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:M.145, C:T.146, C:L.156, C:W.247, C:F.252, C:W.254, C:Y.259, C:Y.259, C:Y.262, C:Y.262, C:A.266
- Salt bridges: C:H.152
- Metal complexes: H2O.12
CLA.46: 30 residues within 4Å:- Chain C: F.21, W.23, W.24, A.25, G.26, N.27, A.28, I.31, E.257, L.260, L.264, F.424, F.425, V.427, G.428, W.431, H.432, R.435
- Chain J: V.30, L.33, F.37
- Ligands: SQD.10, CLA.42, CLA.47, CLA.48, CLA.49, DGD.55, DGD.56, LHG.71, LMG.96
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:L.260, C:L.264, C:F.425, C:W.431, C:W.431
- Hydrogen bonds: C:N.27, C:W.431
- Salt bridges: C:H.432, C:R.435
- Metal complexes: C:H.432
CLA.47: 30 residues within 4Å:- Chain C: N.27, A.28, L.30, I.31, L.37, A.40, H.41, H.44, I.48, Y.137, W.139, M.145, I.148, H.152, L.156, G.256, E.257, Y.259, L.260, S.263, L.264, L.267, F.425
- Ligands: CLA.40, CLA.41, CLA.45, CLA.46, CLA.48, CLA.49, CLA.50
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:N.27, C:L.30, C:I.31, C:L.37, C:A.40, C:H.44, C:Y.137, C:W.139, C:W.139, C:Y.259
- Hydrogen bonds: C:S.263
- Metal complexes: C:H.41
CLA.48: 21 residues within 4Å:- Chain C: N.27, H.44, L.47, I.48, W.51, L.267, L.421, F.424, F.425
- Chain J: P.29, V.30, F.32, L.33
- Ligands: CLA.40, CLA.41, CLA.42, CLA.46, CLA.47, CLA.49, LHG.71, LMG.96
11 PLIP interactions:3 interactions with chain J, 8 interactions with chain C,- Hydrophobic interactions: J:P.29, J:V.30, J:L.33, C:L.47, C:I.48, C:W.51, C:L.267, C:F.424, C:F.425
- Hydrogen bonds: C:N.27
- Metal complexes: C:H.44
CLA.49: 43 residues within 4Å:- Chain C: W.23, W.24, G.26, N.27, R.29, L.30, L.33, K.36, L.37, A.40, A.43, H.44, L.47, A.111, G.114, F.115, V.118, A.121, I.122
- Chain J: F.32, L.33, L.35, A.36, F.37, W.39, Q.40, R.46
- Chain S: I.35, I.36, L.39, N.45, L.46
- Chain T: M.19, V.20, V.23, P.24, A.28
- Ligands: CLA.46, CLA.47, CLA.48, BCR.53, BCR.83, STE.97
16 PLIP interactions:5 interactions with chain J, 2 interactions with chain T, 6 interactions with chain C, 3 interactions with chain S,- Hydrophobic interactions: J:F.32, J:L.33, J:F.37, T:V.20, T:V.23, C:A.40, C:F.115, C:V.118, C:A.121, C:I.122, S:I.36, S:L.39, S:L.46
- pi-Stacking: J:W.39, J:W.39
- Hydrogen bonds: C:R.29
CLA.50: 24 residues within 4Å:- Chain C: L.38, H.41, V.42, A.45, L.113, L.128, F.134, F.135, Y.137, I.148, F.151, H.152, I.154, V.155, L.156, I.158, G.159, L.162
- Ligands: CLA.39, CLA.40, CLA.41, CLA.47, CLA.51, BCR.82
9 PLIP interactions:9 interactions with chain C,- Hydrophobic interactions: C:L.38, C:H.41, C:F.134, C:I.148, C:F.151, C:I.154, C:V.155, C:I.158
- Metal complexes: C:H.152
CLA.51: 20 residues within 4Å:- Chain C: L.38, V.42, V.105, V.112, L.113, F.115, G.116, Y.119, H.120, G.124, P.125, L.128, Y.131, S.132, F.135
- Ligands: CLA.41, CLA.50, STE.58, BCR.82, STE.97
10 PLIP interactions:10 interactions with chain C,- Hydrophobic interactions: C:L.38, C:V.42, C:V.42, C:V.112, C:L.113, C:Y.119, C:L.128, C:F.135, C:F.135
- Metal complexes: C:H.120
CLA.63: 35 residues within 4Å:- Chain A: M.183, V.205, F.206
- Chain D: L.45, W.48, L.122, F.146, P.149, V.152, F.153, S.155, V.156, F.157, F.181, L.182, L.183, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, L.279, S.282, A.283, V.286
- Ligands: CLA.2, CLA.3, PL9.8, PHO.61, CLA.64, LMG.68
13 PLIP interactions:13 interactions with chain D,- Hydrophobic interactions: D:P.149, D:V.152, D:F.181, D:F.185, D:Q.186, D:T.192, D:V.201, D:V.204, D:V.204, D:L.205, D:L.279
- pi-Stacking: D:W.191
- Metal complexes: D:H.197
CLA.64: 34 residues within 4Å:- Chain A: T.45, F.48, V.49, I.78, F.119, S.153, A.154, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain D: T.192, H.197, M.198, V.201, A.202, L.205, G.206, L.209
- Chain K: L.30
- Chain O: F.10, I.14, F.17
- Ligands: CLA.2, PHO.4, SQD.12, CLA.63, PL9.67, LHG.70, LHG.85
7 PLIP interactions:1 interactions with chain O, 2 interactions with chain D, 3 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: O:F.10, D:V.201, D:L.209, A:I.176, A:F.180, A:M.183
- Metal complexes: H2O.2
CLA.65: 33 residues within 4Å:- Chain D: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, G.109, T.112, F.113, L.116, H.117, F.120
- Chain G: G.36, L.39, V.40, L.43
- Chain R: G.13, L.14, L.15, G.17, A.18, V.20, L.21
- Ligands: PL9.8, CLA.20, BCR.66, SQD.69, STE.95
19 PLIP interactions:13 interactions with chain D, 6 interactions with chain R,- Hydrophobic interactions: D:L.36, D:L.43, D:L.91, D:W.93, D:W.93, D:W.93, D:L.116, D:F.120, R:L.14, R:L.15, R:A.18, R:V.20, R:L.21, R:L.21
- Hydrogen bonds: D:L.92
- Water bridges: D:W.93
- Salt bridges: D:H.117
- pi-Stacking: D:F.113
- Metal complexes: D:H.117
CLA.75: 15 residues within 4Å:- Chain B: W.185, G.186, P.187, F.190, A.204
- Chain G: F.41, I.44, I.45, I.48, L.53, L.55
- Ligands: CLA.14, STE.35, BCR.76, STE.78
10 PLIP interactions:4 interactions with chain B, 5 interactions with chain G, 1 Ligand-Water interactions,- Hydrophobic interactions: B:W.185, B:P.187, B:P.187, B:F.190, G:F.41, G:F.41, G:I.44, G:I.48, G:L.55
- Metal complexes: H2O.7
CLA.99: 35 residues within 4Å:- Chain 8: F.17
- Chain U: F.119, A.123, Y.147, P.150, L.151, S.153, A.154, A.156, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, A.287, I.290
- Chain X: L.182, L.183, L.205, F.257
- Ligands: CLA.100, PHO.101, CLA.165, CLA.166, LHG.170
16 PLIP interactions:2 interactions with chain X, 13 interactions with chain U, 1 interactions with chain 8,- Hydrophobic interactions: X:L.182, X:L.205, U:Y.147, U:M.183, U:F.186, U:Q.187, U:I.192, U:I.192, U:L.193, U:F.206, U:F.206, U:T.286, U:I.290, 8:F.17
- Hydrogen bonds: U:T.286
- Metal complexes: U:H.198
CLA.100: 31 residues within 4Å:- Chain U: L.193, H.198, Q.199, V.202, A.203, F.206, G.207, L.210, F.211, F.260, W.278
- Chain X: F.73, L.74, V.152, F.153, V.156, F.157, F.173, V.175, I.178, F.179, F.181, L.182
- Chain Z: L.26
- Ligands: CLA.99, PL9.106, LHG.108, DGD.158, PHO.163, CLA.165, LMG.172
10 PLIP interactions:3 interactions with chain U, 6 interactions with chain X, 1 Ligand-Water interactions,- Hydrophobic interactions: U:V.202, U:L.210, U:W.278, X:F.157, X:F.157, X:F.179, X:F.181, X:L.182, X:L.182
- Metal complexes: H2O.32
CLA.102: 29 residues within 4Å:- Chain 1: L.4, I.6, V.8, Y.9, I.10, V.11, V.12, T.13, F.15, V.16, L.17
- Chain U: V.35, I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, Q.113, L.114, F.117, H.118, L.121
- Ligands: BCR.103, LMG.111, CLA.146, LMG.162
23 PLIP interactions:11 interactions with chain 1, 12 interactions with chain U,- Hydrophobic interactions: 1:I.6, 1:V.8, 1:Y.9, 1:Y.9, 1:Y.9, 1:I.10, 1:V.11, 1:V.12, 1:F.15, 1:F.15, 1:V.16, U:P.39, U:T.40, U:F.93, U:P.95, U:I.96, U:W.97, U:F.117, U:L.121
- Hydrogen bonds: U:I.96
- Salt bridges: U:H.118
- pi-Stacking: U:W.97
- Metal complexes: U:H.118
CLA.113: 14 residues within 4Å:- Chain 0: F.34, L.37, F.41, I.44, I.45, I.48, L.55
- Chain V: W.185, G.186, P.187, F.190, A.204
- Ligands: CLA.114, BCR.189
10 PLIP interactions:4 interactions with chain 0, 5 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: 0:L.37, 0:F.41, 0:F.41, 0:L.55, V:W.185, V:P.187, V:P.187, V:F.190, V:F.190
- Metal complexes: H2O.33
CLA.114: 34 residues within 4Å:- Chain 0: F.38, F.41, L.42, I.45, L.46, Y.49
- Chain V: E.184, W.185, G.189, F.190, P.192, G.197, V.198, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250, V.251, T.255
- Chain X: V.154, L.158, I.159, L.162
- Ligands: CLA.113, CLA.115, CLA.117, CLA.120, CLA.121, DGD.176, BCR.189
16 PLIP interactions:11 interactions with chain V, 4 interactions with chain 0, 1 interactions with chain X,- Hydrophobic interactions: V:W.185, V:F.190, V:F.190, V:A.204, V:A.205, V:V.208, V:V.208, V:F.247, V:F.247, V:F.250, 0:F.38, 0:I.45, 0:L.46, X:I.159
- Metal complexes: V:H.201
- pi-Stacking: 0:F.41
CLA.115: 30 residues within 4Å:- Chain 0: M.35, F.38, L.39, L.42
- Chain V: R.68, L.69, A.146, L.149, C.150, F.153, L.158, M.166, V.198, H.201, H.202, A.205, A.244, F.247, A.248, V.251, V.252, T.262
- Ligands: CLA.114, CLA.116, CLA.117, CLA.118, CLA.120, CLA.121, CLA.122, BCR.189
16 PLIP interactions:3 interactions with chain 0, 13 interactions with chain V,- Hydrophobic interactions: 0:F.38, 0:L.39, 0:L.42, V:L.149, V:F.153, V:F.153, V:F.153, V:F.247, V:F.247, V:A.248, V:V.252
- Hydrogen bonds: V:R.68, V:R.68
- Salt bridges: V:R.68
- pi-Cation interactions: V:H.201
- Metal complexes: V:H.202
CLA.116: 30 residues within 4Å:- Chain V: W.33, F.61, V.62, F.65, R.68, L.145, L.148, L.149, V.245, F.246, A.248, A.249, V.252, M.256, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.115, CLA.117, CLA.118, CLA.119, CLA.122, CLA.123, CLA.124, CLA.125, CLA.127, BCR.130, STE.133
17 PLIP interactions:17 interactions with chain V,- Hydrophobic interactions: V:W.33, V:F.61, V:F.65, V:L.145, V:L.149, V:L.149, V:V.245, V:A.248, V:A.249, V:V.252, V:F.458, V:F.458, V:F.462, V:F.462
- Salt bridges: V:R.68
- pi-Stacking: V:H.455
- Metal complexes: V:H.455
CLA.117: 37 residues within 4Å:- Chain V: T.27, V.30, A.31, W.33, A.34, G.35, M.37, A.38, V.62, F.65, M.66, R.68, L.69, V.71, V.96, H.100, L.103, L.107, L.143, A.146, G.147, C.150, A.205, G.206, V.208, G.209
- Ligands: CLA.114, CLA.115, CLA.116, CLA.118, CLA.121, CLA.122, CLA.124, CLA.125, CLA.127, BCR.131, STE.133
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:T.27, V:V.30, V:A.31, V:A.34, V:L.69, V:V.96, V:L.103, V:L.143
- Hydrogen bonds: V:M.66
- Water bridges: V:R.68
- Salt bridges: V:R.68
- Metal complexes: V:H.100
CLA.118: 29 residues within 4Å:- Chain V: M.66, L.69, G.70, V.71, F.90, W.91, V.96, L.98, A.99, H.100, V.102, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: SQD.12, DGD.13, STE.80, CLA.115, CLA.116, CLA.117, BCR.131, STE.133
18 PLIP interactions:18 interactions with chain V,- Hydrophobic interactions: V:L.69, V:V.71, V:F.90, V:F.90, V:W.91, V:W.91, V:L.98, V:A.99, V:L.103, V:L.106, V:L.149, V:F.153, V:F.156, V:F.162, V:F.162
- Salt bridges: V:H.100
- pi-Stacking: V:F.153
- Metal complexes: V:H.157
CLA.119: 39 residues within 4Å:- Chain 4: L.23, L.27, F.31, F.35
- Chain 5: F.14
- Chain V: W.33, M.37, Y.40, E.41, T.44, Q.58, G.59, M.60, F.61, L.324, F.325, T.327, G.328, P.329, P.447, W.450, F.451, F.453, A.454, H.455, F.458
- Chain X: F.196, M.199, T.277, M.281
- Ligands: BCR.92, CLA.116, CLA.125, BCR.129, BCR.130, LHG.135, STE.137, PL9.169, LMG.183
16 PLIP interactions:1 interactions with chain 5, 1 interactions with chain X, 11 interactions with chain V, 2 interactions with chain 4, 1 Ligand-Water interactions,- Hydrophobic interactions: 5:F.14, X:F.196, V:Y.40, V:F.61, V:F.61, V:F.325, V:P.447, V:W.450, V:A.454, 4:F.31, 4:F.31
- Hydrogen bonds: V:Y.40, V:G.328
- Water bridges: V:W.450
- pi-Stacking: V:F.61
- Metal complexes: H2O.36
CLA.120: 36 residues within 4Å:- Chain 0: L.39, L.43, L.46
- Chain V: L.229, T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, G.470, A.471, T.473, L.474
- Chain X: L.36, L.89, L.91, L.116, F.120, I.123, M.126, L.127, F.130, I.150
- Ligands: CLA.114, CLA.115, CLA.121, CLA.122, STE.136, CLA.167, STE.173, DGD.176, STE.190
12 PLIP interactions:8 interactions with chain V, 4 interactions with chain X,- Hydrophobic interactions: V:A.243, V:F.246, V:F.247, V:F.463, V:F.463, V:I.467, X:F.120, X:I.123, X:I.123, X:M.126
- Salt bridges: V:H.466
- Metal complexes: V:H.466
CLA.121: 36 residues within 4Å:- Chain 0: T.27, T.28, L.30, M.31, F.34, M.35, L.39, L.42, L.43, L.46
- Chain V: F.139, L.143, V.208, I.211, A.212, F.215, H.216, V.219, R.220, P.221, P.222, L.225, L.229, M.231, F.247
- Chain X: F.120, I.123
- Ligands: CLA.114, CLA.115, CLA.117, CLA.120, CLA.122, STE.136, STE.140, DGD.176, BCR.189
17 PLIP interactions:5 interactions with chain 0, 12 interactions with chain V,- Hydrophobic interactions: 0:M.31, 0:F.34, 0:L.42, 0:L.43, V:F.139, V:F.139, V:F.139, V:L.143, V:V.208, V:A.212, V:F.215, V:F.215, V:L.225, V:L.229
- Hydrogen bonds: 0:T.27
- Salt bridges: V:H.216
- Metal complexes: V:H.216
CLA.122: 28 residues within 4Å:- Chain V: L.19, H.23, L.135, P.136, M.138, F.139, H.142, L.143, L.145, A.146, L.149, L.229, M.231, I.234, T.236, V.237, S.240, S.241, A.244, V.245
- Ligands: CLA.115, CLA.116, CLA.117, CLA.120, CLA.121, CLA.124, CLA.127, BCR.189
8 PLIP interactions:7 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: V:L.135, V:F.139, V:H.142, V:L.145, V:M.231, V:T.236, V:A.244
- Metal complexes: H2O.35
CLA.123: 26 residues within 4Å:- Chain 5: F.21
- Chain V: W.5, Y.6, R.7, V.8, H.9, T.10, I.13, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472, F.479
- Ligands: CLA.116, CLA.124, CLA.125, CLA.126, BCR.130, LHG.135, LHG.182
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:L.238, V:L.238, V:F.462, V:F.464
- Hydrogen bonds: V:V.8, V:H.9, V:W.468
- Salt bridges: V:H.9, V:H.469, V:R.472
- pi-Stacking: V:W.468
- Metal complexes: V:H.469
CLA.124: 26 residues within 4Å:- Chain V: H.9, T.10, L.12, I.13, L.19, A.22, H.23, H.26, T.27, V.30, I.234, E.235, V.237, L.238, S.241, I.242, V.245, A.248, F.462
- Ligands: CLA.116, CLA.117, CLA.122, CLA.123, CLA.125, CLA.126, CLA.127
11 PLIP interactions:11 interactions with chain V,- Hydrophobic interactions: V:L.12, V:I.13, V:A.22, V:H.23, V:H.26, V:T.27, V:I.234, V:V.237, V:L.238
- Salt bridges: V:H.23
- Metal complexes: V:H.23
CLA.125: 21 residues within 4Å:- Chain 5: F.14
- Chain V: H.9, H.26, L.29, V.30, W.33, V.245, F.458, L.461, F.462
- Ligands: CLA.116, CLA.117, CLA.119, CLA.123, CLA.124, CLA.126, BCR.129, BCR.130, LHG.135, LHG.182, LMG.183
7 PLIP interactions:7 interactions with chain V,- Hydrophobic interactions: V:V.30, V:W.33, V:W.33, V:F.462, V:F.462
- Salt bridges: V:H.9
- Metal complexes: V:H.26
CLA.126: 29 residues within 4Å:- Chain 4: Q.8, V.10
- Chain 5: L.13, V.17, F.21, L.25
- Chain L: L.16
- Chain O: F.8
- Chain V: L.3, V.8, H.9, V.11, L.12, A.22, M.25, H.26, L.29, W.115
- Ligands: SQD.84, STE.89, STE.90, BCR.92, CLA.123, CLA.124, CLA.125, BCR.129, STE.137, LHG.182, LMG.183
9 PLIP interactions:4 interactions with chain 5, 5 interactions with chain V,- Hydrophobic interactions: 5:L.13, 5:V.17, 5:F.21, 5:L.25, V:V.8, V:L.12, V:L.29, V:W.115
- Metal complexes: V:H.9
CLA.127: 24 residues within 4Å:- Chain 0: L.7, L.11, L.14, N.15
- Chain V: L.19, I.20, H.23, L.24, T.27, L.103, L.107, L.122, F.123, L.133, M.138, I.141, H.142, L.145
- Ligands: CLA.116, CLA.117, CLA.122, CLA.124, CLA.128, BCR.131
9 PLIP interactions:5 interactions with chain 0, 4 interactions with chain V,- Hydrophobic interactions: 0:L.7, 0:L.11, 0:L.14, 0:L.14, 0:N.15, V:I.20, V:I.141, V:L.145
- Metal complexes: V:H.142
CLA.128: 17 residues within 4Å:- Chain 0: T.5, W.6, L.7, G.8, L.11
- Chain V: I.20, L.24, L.107, A.110, W.113, H.114, L.120, L.122, F.123
- Ligands: SQD.12, CLA.127, BCR.131
13 PLIP interactions:4 interactions with chain 0, 9 interactions with chain V,- Hydrophobic interactions: 0:L.7, 0:L.11, V:L.24, V:L.107, V:A.110, V:W.113, V:W.113, V:L.120, V:F.123
- Hydrogen bonds: 0:T.5
- Water bridges: 0:W.6
- pi-Stacking: V:W.113
- Metal complexes: V:H.114
CLA.142: 30 residues within 4Å:- Chain W: T.82, L.83, L.156, G.159, A.160, L.163, L.173, L.201, W.211, I.212, V.215, L.218, V.221, H.225, I.228, A.266, M.269, M.270, I.273, A.274, F.277, V.284, Y.285
- Ligands: CLA.143, CLA.144, CLA.146, CLA.147, CLA.148, CLA.153, BCR.155
9 PLIP interactions:9 interactions with chain W,- Hydrophobic interactions: W:A.160, W:L.163, W:I.228, W:I.228, W:I.228, W:A.266, W:V.284
- Hydrogen bonds: W:Y.285
- Metal complexes: W:H.225
CLA.143: 32 residues within 4Å:- Chain W: W.51, I.75, L.76, H.79, L.83, W.85, G.159, L.162, L.163, A.165, K.166, F.170, L.267, S.268, M.270, G.271, A.274, V.278, Y.285, L.414, H.418, L.421, A.422, F.425
- Ligands: CLA.142, CLA.144, CLA.145, CLA.150, CLA.151, CLA.153, LMG.159, STE.160
16 PLIP interactions:16 interactions with chain W,- Hydrophobic interactions: W:I.75, W:L.76, W:W.85, W:K.166, W:K.166, W:F.170, W:L.267, W:A.274, W:L.414, W:L.421, W:F.425
- Water bridges: W:H.79, W:H.79
- Salt bridges: W:H.79, W:H.418
- Metal complexes: W:H.418
CLA.144: 25 residues within 4Å:- Chain W: A.45, I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106, L.113, L.162, L.267, M.270
- Ligands: CLA.142, CLA.143, CLA.148, CLA.150, CLA.151, CLA.153, CLA.154, STE.160
7 PLIP interactions:7 interactions with chain W,- Hydrophobic interactions: W:V.49, W:A.52, W:L.83, W:V.102, W:L.267
- Salt bridges: W:H.79
- Metal complexes: W:H.106
CLA.145: 31 residues within 4Å:- Chain 3: P.26, V.27, P.29, V.30
- Chain U: F.197, F.285
- Chain W: W.51, M.55, F.58, E.59, H.62, Q.72, G.73, L.74, I.75, L.392, P.410, W.413, L.414, S.417, H.418, V.420, L.421, F.424
- Ligands: CLA.143, CLA.149, CLA.151, DGD.157, DGD.158, LMG.159, LHG.171
6 PLIP interactions:4 interactions with chain W, 1 interactions with chain 3, 1 Ligand-Water interactions,- Hydrophobic interactions: W:W.51, W:W.413, W:W.413, W:W.413, 3:V.30
- Metal complexes: H2O.40
CLA.146: 33 residues within 4Å:- Chain 1: V.12, V.16, F.19, F.23
- Chain U: F.33, I.36, L.121, S.124, C.125, M.127, G.128, W.131
- Chain W: F.252, I.253, A.258, S.261, Y.262, G.265, A.266, M.269, L.426, H.429, L.430, A.433, G.434, A.436, R.437
- Ligands: CLA.102, CLA.142, CLA.148, BCR.155, DGD.156, LMG.162
15 PLIP interactions:4 interactions with chain U, 8 interactions with chain W, 3 interactions with chain 1,- Hydrophobic interactions: U:F.33, U:W.131, U:W.131, U:W.131, W:Y.262, W:Y.262, W:L.430, W:A.433, 1:V.12, 1:F.19, 1:F.23
- Water bridges: W:I.253, W:I.253
- Salt bridges: W:R.437
- Metal complexes: W:H.429
CLA.147: 27 residues within 4Å:- Chain 1: V.20, L.24
- Chain W: T.146, L.149, L.153, L.201, L.202, W.211, I.231, C.232, A.234, G.235, G.236, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252, W.254
- Ligands: CLA.142, CLA.148, BCR.155, LMG.162
11 PLIP interactions:11 interactions with chain W,- Hydrophobic interactions: W:L.149, W:L.149, W:L.153, W:L.153, W:L.201, W:W.238, W:W.247, W:F.252
- Hydrogen bonds: W:F.245
- Salt bridges: W:H.239
- Metal complexes: W:H.239
CLA.148: 26 residues within 4Å:- Chain W: K.142, M.145, T.146, I.148, L.149, H.152, L.153, L.156, I.228, I.231, C.232, W.247, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.142, CLA.144, CLA.146, CLA.147, CLA.150, BCR.155
11 PLIP interactions:10 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: W:M.145, W:T.146, W:L.156, W:W.247, W:F.252, W:Y.259, W:Y.262, W:Y.262, W:A.266
- Salt bridges: W:H.152
- Metal complexes: H2O.38
CLA.149: 29 residues within 4Å:- Chain 3: L.33, F.37
- Chain W: F.21, W.23, W.24, A.25, G.26, N.27, A.28, I.31, E.257, L.260, L.264, F.424, F.425, V.427, G.428, W.431, H.432, R.435
- Ligands: SQD.107, CLA.145, CLA.150, CLA.151, CLA.152, DGD.157, DGD.158, LMG.159, LHG.171
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:A.28, W:L.260, W:L.260, W:L.264, W:F.425, W:W.431
- Hydrogen bonds: W:G.26, W:N.27, W:W.431
- Salt bridges: W:H.432, W:R.435
- pi-Stacking: W:W.431
- Metal complexes: W:H.432
CLA.150: 30 residues within 4Å:- Chain W: N.27, A.28, L.30, I.31, L.37, A.40, H.41, H.44, I.48, Y.137, W.139, M.145, I.148, H.152, L.156, G.256, E.257, Y.259, L.260, S.263, L.264, L.267, F.425
- Ligands: CLA.143, CLA.144, CLA.148, CLA.149, CLA.151, CLA.152, CLA.153
12 PLIP interactions:12 interactions with chain W,- Hydrophobic interactions: W:N.27, W:L.30, W:L.37, W:A.40, W:H.44, W:W.139, W:W.139, W:I.148, W:Y.259
- Hydrogen bonds: W:S.263
- pi-Stacking: W:H.41
- Metal complexes: W:H.41
CLA.151: 21 residues within 4Å:- Chain 3: P.29, V.30, F.32, L.33
- Chain W: N.27, H.44, L.47, I.48, W.51, L.267, L.421, F.424, F.425
- Ligands: CLA.143, CLA.144, CLA.145, CLA.149, CLA.150, CLA.152, LMG.159, LHG.171
9 PLIP interactions:7 interactions with chain W, 2 interactions with chain 3,- Hydrophobic interactions: W:I.48, W:W.51, W:W.51, W:L.267, W:F.425, 3:P.29, 3:L.33
- Hydrogen bonds: W:N.27
- Metal complexes: W:H.44
CLA.152: 45 residues within 4Å:- Chain 3: F.32, L.33, L.35, A.36, F.37, W.39, Q.40
- Chain W: T.12, N.13, R.14, A.22, W.23, W.24, G.26, N.27, R.29, L.30, L.33, K.36, L.37, A.40, A.43, H.44, L.47, A.111, G.114, F.115, V.118, A.121, I.122
- Ligands: CLA.149, CLA.150, CLA.151, BCR.179, BCR.180
- Chain c: I.35, I.36, L.39, N.45, L.46
- Chain d: M.19, V.20, V.23, P.24, A.28
20 PLIP interactions:4 interactions with chain c, 7 interactions with chain W, 6 interactions with chain 3, 3 interactions with chain d,- Hydrophobic interactions: c:I.35, c:I.36, c:L.39, c:L.46, W:L.30, W:L.47, W:F.115, W:V.118, W:A.121, 3:L.33, 3:A.36, 3:W.39, 3:Q.40, d:V.20, d:P.24, d:P.24
- Hydrogen bonds: W:R.29
- Salt bridges: W:R.14
- pi-Stacking: 3:W.39, 3:W.39
CLA.153: 26 residues within 4Å:- Chain W: L.38, H.41, V.42, A.45, L.113, L.128, F.134, F.135, Y.137, K.144, I.148, F.151, H.152, I.154, V.155, L.156, I.158, G.159, L.162
- Ligands: CLA.142, CLA.143, CLA.144, CLA.150, CLA.154, LMG.161, BCR.178
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:H.41, W:L.128, W:F.134, W:Y.137, W:I.148, W:F.151, W:I.154, W:V.155, W:V.155, W:I.158, W:L.162
- Water bridges: W:A.45
- Metal complexes: W:H.152
CLA.154: 18 residues within 4Å:- Chain W: L.38, V.42, V.112, L.113, F.115, G.116, Y.119, H.120, G.124, P.125, L.128, Y.131, S.132, F.135
- Ligands: CLA.144, CLA.153, STE.160, BCR.178
11 PLIP interactions:11 interactions with chain W,- Hydrophobic interactions: W:L.38, W:V.42, W:V.112, W:Y.119, W:Y.119, W:Y.131, W:F.135, W:F.135, W:F.135
- Hydrogen bonds: W:Y.119
- Metal complexes: W:H.120
CLA.165: 33 residues within 4Å:- Chain U: M.183, V.205, F.206
- Chain X: L.45, W.48, L.122, F.146, P.149, V.152, F.153, S.155, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, L.279, S.282, A.283, V.286
- Ligands: CLA.99, CLA.100, PL9.106, PHO.163, CLA.166, LMG.172
15 PLIP interactions:14 interactions with chain X, 1 interactions with chain U,- Hydrophobic interactions: X:W.48, X:L.122, X:V.152, X:F.181, X:L.182, X:F.185, X:Q.186, X:W.191, X:T.192, X:V.201, X:L.205, X:L.279, U:F.206
- pi-Stacking: X:W.191
- Metal complexes: X:H.197
CLA.166: 32 residues within 4Å:- Chain 4: L.30
- Chain 8: F.10, I.14, F.17
- Chain U: T.45, F.48, V.49, I.78, F.119, A.154, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain X: H.197, M.198, V.201, A.202, L.205, G.206, L.209
- Ligands: CLA.99, PHO.101, CLA.165, PL9.169, LHG.170, LHG.182, SQD.185
8 PLIP interactions:5 interactions with chain U, 1 interactions with chain X, 1 interactions with chain 8, 1 Ligand-Water interactions,- Hydrophobic interactions: U:T.45, U:V.157, U:F.158, U:F.180, U:F.182, X:V.201, 8:F.10
- Metal complexes: H2O.31
CLA.167: 36 residues within 4Å:- Chain 0: A.32, V.33, G.36, L.37, L.39, V.40, L.43
- Chain X: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, G.109, T.112, F.113, L.116, H.117, F.120
- Ligands: PL9.106, CLA.120, STE.140, BCR.168, STE.173, STE.190
- Chain b: G.13, L.14, G.17, A.18, V.20, L.21
16 PLIP interactions:4 interactions with chain b, 10 interactions with chain X, 2 interactions with chain 0,- Hydrophobic interactions: b:L.14, b:L.14, b:A.18, b:V.20, X:P.39, X:L.43, X:W.93, X:W.93, X:L.116, 0:A.32, 0:V.40
- Hydrogen bonds: X:L.92
- Water bridges: X:W.93
- Salt bridges: X:H.117
- pi-Stacking: X:F.113
- Metal complexes: X:H.117
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.4: 37 residues within 4Å:- Chain A: L.41, A.44, T.45, F.48, I.115, F.119, A.123, Y.126, Q.130, A.146, Y.147, A.149, P.150, F.158, M.172, P.173, L.174, G.175, I.176, T.179, V.205, P.279, V.280, V.283
- Chain D: L.205, A.208, L.209, A.212, I.213, W.253, I.256, F.257
- Ligands: CLA.2, SQD.12, CLA.64, PL9.67, LHG.70
17 PLIP interactions:16 interactions with chain A, 1 interactions with chain D- Hydrophobic interactions: A:L.41, A:A.44, A:F.48, A:I.115, A:F.119, A:Y.126, A:A.146, A:Y.147, A:Y.147, A:P.150, A:F.158, A:L.174, A:V.283, D:A.212
- Hydrogen bonds: A:Y.126, A:Q.130, A:Y.147
PHO.61: 39 residues within 4Å:- Chain A: F.206, A.209, L.210, F.211, A.213, M.214, F.255, L.258, I.259
- Chain D: L.37, A.41, A.44, L.45, W.48, I.114, A.115, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, A.148, P.149, F.153, F.173, G.174, V.175, I.178, V.204, P.275, V.276, L.279
- Ligands: CLA.3, PL9.8, LHG.11, CLA.63
20 PLIP interactions:16 interactions with chain D, 4 interactions with chain A- Hydrophobic interactions: D:A.41, D:W.48, D:W.48, D:I.114, D:L.122, D:F.125, D:A.145, D:F.146, D:P.149, D:F.173, D:F.173, D:P.275, D:L.279, A:F.206, A:A.209, A:L.210, A:A.213
- Hydrogen bonds: D:Q.129, D:N.142
- pi-Stacking: D:F.146
PHO.101: 37 residues within 4Å:- Chain U: L.41, A.44, T.45, F.48, I.115, F.119, A.123, Y.126, Q.130, A.146, Y.147, A.149, P.150, F.158, M.172, P.173, L.174, G.175, I.176, T.179, V.205, P.279, V.280, V.283
- Chain X: L.205, A.208, L.209, A.212, I.213, W.253, I.256, F.257
- Ligands: CLA.99, CLA.166, PL9.169, LHG.170, SQD.185
16 PLIP interactions:13 interactions with chain U, 3 interactions with chain X- Hydrophobic interactions: U:L.41, U:A.44, U:F.48, U:F.48, U:I.115, U:A.146, U:Y.147, U:P.150, U:V.283, X:L.205, X:L.209, X:A.212
- Hydrogen bonds: U:Y.126, U:Q.130, U:Y.147
- pi-Stacking: U:Y.147
PHO.163: 37 residues within 4Å:- Chain U: F.206, A.209, L.210, A.213, M.214, F.255, L.258, I.259
- Chain X: L.37, A.41, A.44, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, A.148, P.149, F.153, F.173, G.174, V.175, I.178, V.204, P.275, V.276, L.279
- Ligands: CLA.100, PL9.106, LHG.108, CLA.165
24 PLIP interactions:21 interactions with chain X, 3 interactions with chain U- Hydrophobic interactions: X:A.41, X:A.44, X:L.45, X:W.48, X:W.48, X:W.48, X:W.48, X:I.114, X:L.122, X:F.125, X:F.125, X:A.145, X:F.146, X:P.149, X:F.153, X:V.175, X:P.275, X:L.279, U:F.206, U:L.210, U:A.213
- Hydrogen bonds: X:Q.129, X:N.142
- pi-Stacking: X:F.146
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.6: 6 residues within 4Å:- Chain A: N.181, V.185, H.332, E.333
- Chain D: K.317, L.321
Ligand excluded by PLIPCL.7: 5 residues within 4Å:- Chain A: H.337, N.338, F.339
- Chain C: G.341, E.342
Ligand excluded by PLIPCL.104: 6 residues within 4Å:- Chain U: N.181, V.185, H.332, E.333
- Chain X: K.317, L.321
Ligand excluded by PLIPCL.105: 5 residues within 4Å:- Chain U: H.337, N.338, F.339
- Chain W: G.341, E.342
Ligand excluded by PLIP- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.8: 36 residues within 4Å:- Chain A: L.210, F.211, M.214, H.215, L.218, V.219, Y.246, I.248, A.251, H.252, F.255, I.259, A.263, S.264, F.265, N.266, L.271, F.274, L.275
- Chain D: F.38, P.39, A.41, Y.42, L.43, L.45
- Chain F: V.21, A.22, T.25, L.26
- Ligands: CLA.3, LHG.11, PHO.61, CLA.63, CLA.65, BCR.66, SQD.69
14 PLIP interactions:9 interactions with chain A, 2 interactions with chain F, 3 interactions with chain D- Hydrophobic interactions: A:F.211, A:M.214, A:L.218, A:F.255, A:F.255, A:L.271, A:L.271, A:F.274, F:A.22, F:T.25, D:F.38, D:L.43, D:L.45
- Hydrogen bonds: A:F.265
PL9.67: 48 residues within 4Å:- Chain A: F.48, V.49, F.52, I.53, L.71, I.77, I.78, I.176
- Chain D: M.198, M.199, A.202, G.203, G.206, L.209, L.210, I.213, H.214, T.217, V.218, Y.244, M.246, A.249, N.250, W.253, F.257, I.259, A.260, F.261, L.267, F.270, F.273, V.274, T.277, G.278, M.281
- Chain K: L.23, V.26, L.27, L.29, L.30
- Chain O: Y.6, V.7, F.10
- Ligands: PHO.4, CLA.19, CLA.64, LHG.70, LHG.85
27 PLIP interactions:2 interactions with chain K, 5 interactions with chain A, 17 interactions with chain D, 3 interactions with chain O- Hydrophobic interactions: K:L.23, K:L.29, A:F.52, A:F.52, A:F.52, A:I.77, A:I.176, D:M.199, D:L.209, D:L.210, D:L.210, D:I.213, D:T.217, D:A.249, D:W.253, D:F.261, D:F.261, D:L.267, D:F.270, D:F.273, D:V.274, D:T.277, O:F.10, O:F.10, O:F.10
- Hydrogen bonds: D:F.261
- pi-Stacking: D:F.261
PL9.106: 44 residues within 4Å:- Chain U: L.210, F.211, M.214, H.215, L.218, V.219, Y.246, I.248, A.251, H.252, F.255, I.259, A.263, S.264, F.265, L.271, F.274, L.275
- Chain X: W.21, L.22, V.28, V.30, G.34, I.35, F.38, P.39, A.41, Y.42, L.45, F.125
- Chain Z: V.18, V.21, A.22, T.25, L.26
- Ligands: CLA.100, LHG.108, PHO.163, CLA.165, CLA.167, SQD.175
- Chain b: V.20, T.24, L.28
18 PLIP interactions:5 interactions with chain X, 1 interactions with chain Z, 11 interactions with chain U, 1 interactions with chain b- Hydrophobic interactions: X:V.30, X:F.38, X:P.39, X:Y.42, X:L.45, Z:V.18, U:F.211, U:F.211, U:M.214, U:L.218, U:L.218, U:F.255, U:F.255, U:A.263, U:L.271, U:F.274, b:T.24
- Hydrogen bonds: U:F.265
PL9.169: 48 residues within 4Å:- Chain 4: L.23, V.26, L.27, L.29, L.30
- Chain 8: Y.6, V.7, F.10
- Chain U: F.48, V.49, F.52, I.53, L.71, I.77, I.176
- Chain X: M.198, M.199, A.202, G.203, G.206, L.209, L.210, I.213, H.214, T.217, V.218, Y.244, M.246, A.249, N.250, W.253, F.257, I.259, A.260, F.261, S.262, L.267, F.270, F.273, V.274, T.277, G.278, M.281
- Ligands: PHO.101, CLA.119, CLA.166, LHG.170, LHG.182
21 PLIP interactions:13 interactions with chain X, 4 interactions with chain U, 2 interactions with chain 4, 2 interactions with chain 8- Hydrophobic interactions: X:M.199, X:A.202, X:T.217, X:A.249, X:W.253, X:F.261, X:F.261, X:L.267, X:F.270, X:F.273, X:V.274, X:T.277, U:F.52, U:I.77, U:I.77, U:I.176, 4:L.23, 4:L.29, 8:F.10, 8:F.10
- Hydrogen bonds: X:F.261
- 13 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.9: 28 residues within 4Å:- Chain A: F.93, P.95, W.97, E.98, F.117, L.120, L.121, S.124, F.155, L.159
- Chain C: L.201, L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269, F.272, I.273, L.426
- Chain H: K.5, Y.9
- Ligands: CLA.5, CLA.43, CLA.44, DGD.54
9 PLIP interactions:4 interactions with chain A, 3 interactions with chain C, 2 interactions with chain H- Hydrophobic interactions: A:L.121, A:F.155, C:F.206, C:F.206
- Hydrogen bonds: A:W.97, A:E.98, H:K.5, H:Y.9
- Water bridges: C:S.204
LMG.33: 17 residues within 4Å:- Chain B: A.228, L.229, R.230, L.474
- Chain D: W.32, S.33, I.35, L.36, L.127, F.130, E.131, R.134
- Chain G: M.35
- Chain R: F.25
- Ligands: CLA.20, CLA.21, LMG.72
2 PLIP interactions:1 interactions with chain D, 1 interactions with chain B- Hydrophobic interactions: D:I.35
- Salt bridges: B:R.230
LMG.68: 28 residues within 4Å:- Chain D: L.45, W.48, L.49, Y.67, G.70, C.71, N.72, F.73
- Chain F: V.23, L.26, A.27, T.30, I.37, M.40, Q.41
- Chain I: V.25, F.28, F.29, G.31, A.32, A.34, L.36, G.37
- Ligands: CLA.3, LHG.11, DGD.56, CLA.63, BCR.66
16 PLIP interactions:3 interactions with chain F, 4 interactions with chain I, 9 interactions with chain D- Hydrophobic interactions: F:V.23, F:L.26, I:F.28, I:F.29, D:L.49, D:F.73, D:F.73, D:F.73
- Hydrogen bonds: F:Q.41, I:G.31, I:L.36, D:Y.67, D:G.70, D:C.71, D:F.73
- Water bridges: D:N.72
LMG.72: 17 residues within 4Å:- Chain B: R.224, L.225, K.227, A.228
- Chain D: F.15, D.19, K.23, W.32, L.135
- Chain G: W.25, T.28, M.31, A.32, M.35, G.36
- Ligands: CLA.21, LMG.33
8 PLIP interactions:2 interactions with chain G, 1 interactions with chain B, 5 interactions with chain D- Hydrophobic interactions: G:W.25, G:A.32, D:W.32, D:W.32
- Water bridges: B:K.498, D:D.16
- Hydrogen bonds: D:K.23
- Salt bridges: D:K.23
LMG.87: 29 residues within 4Å:- Chain B: Y.40, T.327, G.328, P.329, K.332, W.450, F.453, A.454, V.457, F.458, L.461
- Chain D: F.196, I.284
- Chain K: F.35
- Chain L: N.4, L.6, G.7, A.10, L.13, F.14, V.17
- Ligands: CLA.19, CLA.25, CLA.26, BCR.29, BCR.30, STE.36, LHG.73, LHG.85
9 PLIP interactions:6 interactions with chain B, 1 interactions with chain K, 2 interactions with chain L- Hydrophobic interactions: B:T.327, B:F.453, K:F.35
- Hydrogen bonds: B:T.327, B:K.332, L:N.4, L:N.4
- Water bridges: B:T.327, B:T.327
LMG.96: 18 residues within 4Å:- Chain C: F.58, H.62, G.73, L.421
- Chain I: I.22
- Chain J: D.23, V.24, V.27, V.30, L.31
- Chain S: Q.21, I.25
- Ligands: CLA.40, CLA.42, CLA.46, CLA.48, DGD.55, STE.81
10 PLIP interactions:2 interactions with chain S, 5 interactions with chain J, 3 interactions with chain C- Hydrophobic interactions: S:I.25, J:V.27, J:V.27, J:V.30, J:L.31, C:L.421
- Hydrogen bonds: S:Q.21, J:D.23, C:H.62
- Salt bridges: C:H.62
LMG.111: 27 residues within 4Å:- Chain 1: M.1, L.4
- Chain 6: K.95, Q.135, G.139
- Chain B: W.75, S.76, D.87, F.90, E.94, L.98, V.102, L.106
- Chain U: I.46, I.50, P.56, Y.73, I.96, S.101, L.102, D.103, L.106
- Ligands: BCR.30, CLA.102, BCR.103, STE.110, SQD.185
11 PLIP interactions:4 interactions with chain B, 4 interactions with chain U, 2 interactions with chain 6, 1 interactions with chain 1- Hydrophobic interactions: B:W.75, B:W.75, B:L.98, U:L.102, U:L.102, 1:L.4
- Hydrogen bonds: B:E.94, U:D.103, U:D.103, 6:Q.135
- Salt bridges: 6:K.95
LMG.134: 17 residues within 4Å:- Chain V: F.144, L.148, F.151, A.155, F.156, T.159, L.161, P.180, A.182, P.183, W.185, I.203, I.207, I.210, I.211, L.214
- Ligands: STE.139
4 PLIP interactions:4 interactions with chain V- Hydrophobic interactions: V:F.151, V:A.155, V:L.161
- Hydrogen bonds: V:W.185
LMG.159: 14 residues within 4Å:- Chain 3: D.23, V.27, V.30
- Chain W: F.58, H.62, Q.72, L.421
- Ligands: CLA.143, CLA.145, CLA.149, CLA.151, DGD.157, STE.177
- Chain c: Q.21
2 PLIP interactions:2 interactions with chain W- Hydrogen bonds: W:Q.72
- Salt bridges: W:H.62
LMG.161: 13 residues within 4Å:- Chain W: I.154, I.158, L.161, M.168, F.169, T.188, N.189, P.190, L.192, I.226, L.230, I.233
- Ligands: CLA.153
2 PLIP interactions:2 interactions with chain W- Hydrophobic interactions: W:I.158, W:I.233
LMG.162: 28 residues within 4Å:- Chain 1: K.5, Y.9
- Chain U: F.93, P.95, W.97, E.98, F.117, L.120, L.121, S.124, F.155, L.159
- Chain W: L.201, L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269, F.272, I.273, L.426
- Ligands: CLA.102, CLA.146, CLA.147, DGD.156
13 PLIP interactions:5 interactions with chain U, 5 interactions with chain W, 3 interactions with chain 1- Hydrophobic interactions: U:F.117, U:L.121, U:F.155, U:F.155, W:W.211, W:F.272
- Hydrogen bonds: U:W.97, W:E.209, 1:K.5, 1:Y.9, 1:Y.9
- Water bridges: W:S.204, W:S.204
LMG.172: 28 residues within 4Å:- Chain 2: V.25, F.28, F.29, G.31, A.32, L.36, G.37
- Chain X: L.45, W.48, L.49, Y.67, L.68, E.69, G.70, C.71, N.72, F.73
- Chain Z: L.26, A.27, T.30, I.37, M.40, Q.41
- Ligands: CLA.100, DGD.157, DGD.158, CLA.165, BCR.168
12 PLIP interactions:7 interactions with chain X, 2 interactions with chain 2, 3 interactions with chain Z- Hydrophobic interactions: X:F.73, X:F.73, X:F.73, X:F.73, 2:F.28, Z:A.27
- Hydrogen bonds: X:Y.67, X:G.70, X:F.73, 2:L.36, Z:Q.41, Z:Q.41
LMG.183: 30 residues within 4Å:- Chain 4: F.35
- Chain 5: N.4, L.6, G.7, A.10, L.13, F.14, V.17
- Chain V: Y.40, F.325, T.327, G.328, P.329, K.332, W.450, F.453, A.454, V.457, F.458, L.461
- Chain X: F.196, I.284
- Ligands: CLA.119, CLA.125, CLA.126, BCR.129, BCR.130, LHG.135, STE.137, LHG.182
11 PLIP interactions:7 interactions with chain V, 2 interactions with chain 5, 2 interactions with chain 4- Hydrophobic interactions: V:A.454, V:V.457, 5:L.13, 4:F.35, 4:F.35
- Hydrogen bonds: V:Y.40, V:T.327, V:T.327, 5:N.4
- Water bridges: V:K.332, V:K.332
- 8 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.10: 25 residues within 4Å:- Chain A: L.200, A.203, G.204, F.265, N.267, S.270, F.273, F.274, A.277, W.278, V.281, G.282
- Chain C: A.22, W.23, W.24
- Chain D: S.230, F.232, R.233
- Chain I: I.22
- Chain J: A.34, F.37
- Ligands: LHG.11, CLA.46, LHG.71, BCR.83
15 PLIP interactions:2 interactions with chain D, 6 interactions with chain A, 4 interactions with chain J, 1 interactions with chain I, 2 interactions with chain C- Hydrogen bonds: D:S.230, A:N.267, A:S.270, C:W.24
- Salt bridges: D:R.233
- Hydrophobic interactions: A:F.273, A:F.274, A:W.278, A:W.278, J:A.34, J:F.37, J:F.37, J:F.37, I:I.22, C:W.24
SQD.12: 23 residues within 4Å:- Chain A: W.20, N.26, R.27, L.28, V.30, M.37, I.38, L.41, L.42, T.45
- Chain O: I.14, F.17, F.22
- Chain V: L.106, L.109
- Ligands: PHO.4, DGD.13, CLA.64, LHG.70, BCR.92, CLA.118, CLA.128, BCR.131
8 PLIP interactions:7 interactions with chain A, 1 interactions with chain V- Hydrophobic interactions: A:L.28, A:V.30, A:I.38, A:I.38, A:L.42, V:L.106
- Hydrogen bonds: A:R.27, A:L.28
SQD.34: 27 residues within 4Å:- Chain 4: R.14, L.17, Y.18, L.21
- Chain 5: Y.26
- Chain 8: F.8, C.12, A.15, L.16, F.19, F.23, P.26
- Chain B: R.18, M.25, A.28, L.29, S.104, G.105, F.108, W.115
- Chain K: N.4, R.7
- Ligands: CLA.26, BCR.29, BCR.30, STE.86, BCR.184
10 PLIP interactions:4 interactions with chain B, 5 interactions with chain 4, 1 interactions with chain K- Hydrophobic interactions: B:A.28, B:F.108, 4:L.17, 4:Y.18
- Hydrogen bonds: B:W.115, 4:R.14, 4:R.14
- Salt bridges: B:R.18, 4:R.14, K:R.7
SQD.69: 20 residues within 4Å:- Chain D: W.21, R.24, R.26
- Chain E: E.7
- Chain F: P.14, F.16, T.17, V.18, V.21
- Chain N: Q.30, L.34
- Chain R: V.20, L.23, T.24, V.27, L.28, I.31, D.35
- Ligands: PL9.8, CLA.65
9 PLIP interactions:4 interactions with chain D, 3 interactions with chain R, 1 interactions with chain N, 1 interactions with chain F- Hydrogen bonds: D:R.24, R:D.35, N:Q.30, F:V.18
- Water bridges: D:W.21, D:R.26
- Salt bridges: D:R.26
- Hydrophobic interactions: R:V.20, R:L.23
SQD.84: 26 residues within 4Å:- Chain 4: N.4
- Chain K: R.14, L.17, Y.18, L.21
- Chain L: Y.26
- Chain O: C.12, A.15, L.16, F.19, F.23, R.24, P.26
- Chain V: R.18, M.25, A.28, L.29, G.32, S.104, F.108, W.115
- Ligands: STE.89, BCR.92, CLA.126, BCR.129, BCR.130
14 PLIP interactions:6 interactions with chain V, 6 interactions with chain K, 2 interactions with chain O- Hydrophobic interactions: V:A.28, V:L.29, V:F.108, V:F.108, K:Y.18, K:L.21, O:A.15, O:F.19
- Hydrogen bonds: V:W.115, K:R.14, K:R.14
- Salt bridges: V:R.18, K:R.14, K:R.14
SQD.107: 30 residues within 4Å:- Chain 2: I.22
- Chain 3: L.33, A.34, F.37
- Chain U: L.200, A.203, G.204, F.265, N.267, S.270, F.273, F.274, A.277, W.278, V.281, G.282, F.285
- Chain W: Q.16, A.22, W.23, W.24
- Chain X: S.230, F.232, R.233
- Ligands: LHG.108, CLA.149, DGD.158, LHG.171, BCR.179, STE.181
16 PLIP interactions:3 interactions with chain W, 8 interactions with chain U, 2 interactions with chain X, 3 interactions with chain 3- Hydrogen bonds: W:Q.16, W:W.24, U:N.267, U:S.270, X:S.230
- Water bridges: W:W.23
- Hydrophobic interactions: U:A.203, U:F.265, U:F.273, U:F.274, U:W.278, U:W.278, 3:A.34, 3:F.37, 3:F.37
- Salt bridges: X:R.233
SQD.175: 17 residues within 4Å:- Chain 7: Q.30
- Chain X: W.21, R.24, R.26
- Chain Y: E.7
- Chain Z: P.14, F.16, T.17, V.18, V.21
- Ligands: PL9.106
- Chain b: L.23, T.24, V.27, L.28, I.31, D.35
14 PLIP interactions:4 interactions with chain b, 5 interactions with chain Z, 4 interactions with chain X, 1 interactions with chain 7- Hydrophobic interactions: b:V.27, b:V.27, b:I.31, Z:F.16, Z:V.18, Z:V.21
- Water bridges: b:D.35, Z:R.19, X:F.27
- Hydrogen bonds: Z:V.18, X:W.21, X:R.24, 7:Q.30
- Salt bridges: X:R.26
SQD.185: 21 residues within 4Å:- Chain 8: F.22
- Chain B: L.106, L.109
- Chain U: W.20, N.26, R.27, L.28, V.30, M.37, I.38, L.41, L.42, T.45
- Ligands: CLA.18, CLA.28, BCR.31, PHO.101, LMG.111, CLA.166, LHG.170, BCR.184
1 PLIP interactions:1 interactions with chain U- Hydrophobic interactions: U:T.45
- 10 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.11: 28 residues within 4Å:- Chain A: H.252, L.258, I.259, F.260, Q.261, Y.262, A.263, S.264, F.265, N.266, F.274
- Chain D: F.27, V.28, L.37, F.38, F.125, R.128
- Chain E: P.9, F.10, S.11
- Chain F: A.22, V.23, L.26
- Ligands: CLA.3, PL9.8, SQD.10, PHO.61, LMG.68
10 PLIP interactions:1 interactions with chain A, 3 interactions with chain D, 5 interactions with chain E, 1 interactions with chain F- Hydrophobic interactions: A:Y.262, D:F.27, D:V.28, D:F.38, E:F.10, E:F.10, F:L.26
- Hydrogen bonds: E:F.10, E:S.11, E:S.11
LHG.70: 37 residues within 4Å:- Chain A: L.28, M.37, I.38, Y.126, R.129, N.234
- Chain D: I.256, F.257, G.258, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Chain K: N.13, T.15, S.16, Y.18, L.19, L.22, V.26, L.29
- Chain O: F.10, I.13, L.16, F.17, A.20, I.21
- Ligands: CLA.2, PHO.4, SQD.12, CLA.64, PL9.67, LHG.85, BCR.92
14 PLIP interactions:7 interactions with chain D, 2 interactions with chain O, 5 interactions with chain K- Hydrophobic interactions: D:F.257, D:F.261, O:F.17, O:I.21, K:L.19, K:L.22, K:V.26
- Hydrogen bonds: D:S.262, D:S.262, D:S.262, D:N.263, D:W.266, K:N.13, K:S.16
LHG.71: 30 residues within 4Å:- Chain A: R.140, W.142, I.143, V.145, A.146, F.273, A.276, A.277, V.280, V.281, W.284, F.285
- Chain C: F.21, W.24, A.25, F.424, W.431, R.435
- Chain D: A.216, E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.10, CLA.42, CLA.46, CLA.48, DGD.56
13 PLIP interactions:5 interactions with chain C, 4 interactions with chain A, 4 interactions with chain D- Hydrophobic interactions: C:W.24, C:W.24, C:F.424, A:F.273, A:F.273, A:W.284
- Hydrogen bonds: C:R.435, C:R.435, D:N.220, D:A.229, D:T.231, D:T.231
- Salt bridges: A:R.140
LHG.73: 32 residues within 4Å:- Chain A: S.232, A.233, N.234
- Chain B: W.5, Y.6, R.7, L.461, F.464, W.468, F.479
- Chain D: R.139, Y.141, I.144, W.266, F.269, L.272, F.273, V.276, T.277, W.280, M.281
- Chain K: L.23, I.24, L.27
- Chain L: F.14, V.17, P.18
- Ligands: CLA.19, CLA.23, CLA.25, LHG.85, LMG.87
18 PLIP interactions:1 interactions with chain K, 7 interactions with chain B, 3 interactions with chain L, 3 interactions with chain A, 4 interactions with chain D- Hydrophobic interactions: K:L.23, B:W.5, B:L.461, B:F.464, L:F.14, L:F.14, L:P.18, D:V.276
- Hydrogen bonds: B:Y.6, B:Y.6, A:S.232, A:N.234, A:N.234, D:R.139, D:Y.141
- Water bridges: B:R.7, D:R.139
- Salt bridges: B:R.7
LHG.85: 34 residues within 4Å:- Chain A: S.232, N.234, Y.235
- Chain B: P.4, W.5, Y.6
- Chain D: A.202, W.266, F.269, F.270, F.273
- Chain K: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23, I.24, V.26
- Chain L: V.17, P.18, F.21, L.22
- Ligands: CLA.23, CLA.25, CLA.26, BCR.29, CLA.64, PL9.67, LHG.70, LHG.73, LMG.87
15 PLIP interactions:2 interactions with chain A, 4 interactions with chain B, 2 interactions with chain L, 4 interactions with chain K, 3 interactions with chain D- Hydrogen bonds: A:S.232, A:N.234, B:W.5, B:W.5, B:Y.6, K:E.11, K:E.11, K:N.13, K:S.16
- Hydrophobic interactions: B:W.5, L:P.18, L:F.21, D:W.266, D:F.273, D:F.273
LHG.108: 22 residues within 4Å:- Chain U: L.258, I.259, F.260, Y.262, A.263, F.265
- Chain X: F.27, V.28, L.37, F.38, F.125, R.128
- Chain Y: P.9, F.10, S.11
- Chain Z: A.22, V.23, L.26
- Ligands: CLA.100, PL9.106, SQD.107, PHO.163
7 PLIP interactions:2 interactions with chain X, 2 interactions with chain U, 3 interactions with chain Y- Hydrophobic interactions: X:F.27, X:V.28, U:F.260, U:F.260, Y:F.10
- Hydrogen bonds: Y:F.10, Y:S.11
LHG.135: 31 residues within 4Å:- Chain 4: L.23, I.24, L.27
- Chain 5: F.14, P.18
- Chain U: S.232, A.233, N.234
- Chain V: W.5, Y.6, R.7, L.461, F.464, W.468, F.479
- Chain X: R.139, Y.141, I.144, W.266, F.269, L.272, F.273, V.276, T.277, W.280, M.281
- Ligands: CLA.119, CLA.123, CLA.125, LHG.182, LMG.183
17 PLIP interactions:5 interactions with chain X, 5 interactions with chain V, 6 interactions with chain U, 1 interactions with chain 5- Hydrophobic interactions: X:F.273, X:V.276, X:W.280, V:W.5, V:L.461, V:F.464, 5:F.14
- Hydrogen bonds: X:R.139, X:Y.141, U:S.232, U:A.233, U:N.234, U:N.234, U:N.234, U:N.234
- Water bridges: V:R.7
- Salt bridges: V:R.7
LHG.170: 36 residues within 4Å:- Chain 4: N.13, T.15, S.16, Y.18, L.19, L.22, V.26, L.29
- Chain 8: F.10, I.13, L.16, F.17, A.20, I.21
- Chain U: L.28, M.37, Y.126, R.129, N.234
- Chain X: I.256, F.257, G.258, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Ligands: CLA.99, PHO.101, CLA.166, PL9.169, LHG.182, BCR.184, SQD.185
18 PLIP interactions:8 interactions with chain X, 5 interactions with chain 4, 5 interactions with chain 8- Hydrophobic interactions: X:I.259, X:F.261, X:F.270, 4:Y.18, 4:L.19, 4:L.22, 8:F.17, 8:F.17, 8:F.17, 8:A.20, 8:I.21
- Hydrogen bonds: X:S.262, X:S.262, X:S.262, X:N.263, X:W.266, 4:N.13, 4:S.16
LHG.171: 28 residues within 4Å:- Chain U: R.140, W.142, V.145, A.146, F.273, A.276, A.277, V.280, V.281, W.284, F.285
- Chain W: F.21, W.24, A.25, F.424, W.431, R.435
- Chain X: A.216, E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.107, CLA.145, CLA.149, CLA.151
13 PLIP interactions:6 interactions with chain X, 3 interactions with chain U, 4 interactions with chain W- Hydrogen bonds: X:N.220, X:A.229, X:A.229, X:A.229, X:T.231, X:T.231, W:R.435, W:R.435
- Hydrophobic interactions: U:A.276, U:F.285, W:W.24, W:W.431
- Salt bridges: U:R.140
LHG.182: 36 residues within 4Å:- Chain 4: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23, I.24, V.26
- Chain 5: V.17, P.18, F.21, L.22
- Chain U: S.232, N.234, Y.235
- Chain V: L.3, P.4, W.5, Y.6
- Chain X: A.202, W.266, F.269, F.270, F.273
- Ligands: CLA.123, CLA.125, CLA.126, BCR.129, BCR.130, LHG.135, CLA.166, PL9.169, LHG.170, LMG.183
17 PLIP interactions:2 interactions with chain U, 5 interactions with chain V, 6 interactions with chain 4, 3 interactions with chain X, 1 interactions with chain 5- Hydrogen bonds: U:S.232, U:Y.235, V:W.5, V:W.5, V:Y.6, 4:E.11, 4:E.11, 4:E.11, 4:N.13
- Hydrophobic interactions: V:W.5, V:W.5, 4:L.19, 4:L.22, X:W.266, X:F.270, X:F.273, 5:F.21
- 9 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.13: 35 residues within 4Å:- Chain A: L.42, I.46, I.50, P.56, Y.73, S.101, L.102, D.103, L.106
- Chain H: M.1, T.3, L.4, T.7, V.11
- Chain M: K.95, Q.135, G.139
- Chain V: W.75, S.76, D.87, F.90, E.94, L.98, V.102, L.106, L.109
- Ligands: CLA.5, SQD.12, BCR.79, STE.80, BCR.92, CLA.118, BCR.130, STE.133, STE.138
12 PLIP interactions:2 interactions with chain V, 2 interactions with chain H, 6 interactions with chain A, 2 interactions with chain M- Hydrophobic interactions: V:F.90, H:L.4, H:T.7, A:I.46
- Water bridges: V:D.87, A:L.102
- Hydrogen bonds: A:D.103, A:D.103, A:D.103, A:D.103, M:K.95, M:Q.135
DGD.54: 39 residues within 4Å:- Chain A: L.91, M.127, L.151, A.152, F.155, L.159, I.160, I.163, F.168
- Chain C: W.177, P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, M.269, F.272, I.273, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, F.419, F.423, L.426
- Ligands: LMG.9, CLA.43, CLA.44, BCR.52
14 PLIP interactions:11 interactions with chain C, 3 interactions with chain A- Hydrophobic interactions: C:W.211, C:V.213, C:L.426, A:F.155, A:I.160, A:I.163
- Hydrogen bonds: C:G.208, C:N.282, C:T.283, C:T.283, C:D.348, C:R.350, C:R.350
- Water bridges: C:F.280
DGD.55: 26 residues within 4Å:- Chain A: H.195, F.197, T.292, L.297
- Chain C: E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417, V.420
- Chain I: I.22, V.25, G.26, F.29, Y.33
- Ligands: CLA.42, CLA.46, DGD.56, STE.81, LMG.96
14 PLIP interactions:10 interactions with chain C, 3 interactions with chain A, 1 interactions with chain I- Hydrophobic interactions: C:W.413, A:F.197, A:F.197, A:L.297, I:V.25
- Hydrogen bonds: C:Q.72, C:S.394, C:N.406, C:N.406, C:N.406, C:V.408, C:W.413
- Water bridges: C:Q.72, C:G.73
DGD.56: 35 residues within 4Å:- Chain A: P.196, F.197, Q.199, L.200, A.203, F.285, F.300, N.301, F.302, S.305
- Chain C: L.392, N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain D: N.72, F.73, L.74
- Chain I: F.29, A.32, Y.33, G.37, S.38, S.39, L.40
- Chain Q: Q.60
- Ligands: CLA.3, CLA.42, CLA.46, DGD.55, LMG.68, LHG.71
20 PLIP interactions:7 interactions with chain C, 1 interactions with chain Q, 8 interactions with chain A, 3 interactions with chain I, 1 interactions with chain D- Hydrogen bonds: C:N.393, C:N.403, C:N.403, C:S.404, C:S.404, C:N.406, Q:Q.60, A:S.305, I:A.32, I:G.37
- Water bridges: C:N.406
- Hydrophobic interactions: A:P.196, A:F.197, A:L.200, A:A.203, A:F.285, A:F.300, A:F.300, I:F.29, D:L.74
DGD.77: 43 residues within 4Å:- Chain B: Y.193, F.246, F.250, V.251, A.253, G.254, T.255, W.257, Y.258, Y.273, Q.274, S.277, Y.279, T.452, A.456, F.463
- Chain D: G.86, H.87, L.89, L.116, A.119, F.120, I.123, I.150, V.154, L.158, I.159, L.162, G.163, S.165, W.167, A.290, L.291
- Chain E: R.69
- Chain G: L.46, Y.49, N.50, V.60, S.61, W.62
- Ligands: CLA.14, CLA.20, CLA.21
17 PLIP interactions:5 interactions with chain G, 4 interactions with chain B, 7 interactions with chain D, 1 interactions with chain E- Hydrophobic interactions: G:Y.49, G:Y.49, B:Y.258, B:T.452, B:F.463, D:F.120, D:L.162, D:L.291
- Hydrogen bonds: G:N.50, G:W.62, G:W.62, D:H.87, D:H.87
- Water bridges: B:T.271, E:R.69
- Salt bridges: D:H.87, D:H.87
DGD.156: 36 residues within 4Å:- Chain U: L.91, M.127, L.151, A.152, F.155, L.159, I.160, I.163, F.168
- Chain W: W.177, P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, F.272, I.273, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, F.419, F.423, L.426
- Ligands: CLA.146, LMG.162
17 PLIP interactions:12 interactions with chain W, 5 interactions with chain U- Hydrophobic interactions: W:P.205, W:V.213, W:L.426, U:L.151, U:F.155, U:F.155, U:I.160, U:I.163
- Hydrogen bonds: W:G.208, W:N.281, W:N.282, W:N.282, W:T.283, W:T.283, W:D.348, W:R.350, W:R.350
DGD.157: 27 residues within 4Å:- Chain 2: V.25, F.29, Y.33
- Chain U: H.195, F.197, T.292, L.297
- Chain W: K.67, E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417, V.420
- Ligands: CLA.145, CLA.149, DGD.158, LMG.159, BCR.168, LMG.172, STE.177
13 PLIP interactions:10 interactions with chain W, 1 interactions with chain U, 2 interactions with chain 2- Hydrophobic interactions: W:W.413, U:F.197, 2:F.29, 2:F.29
- Hydrogen bonds: W:Q.72, W:Q.72, W:S.394, W:S.394, W:N.406, W:V.408, W:W.413
- Water bridges: W:G.73, W:G.73
DGD.158: 35 residues within 4Å:- Chain 2: F.29, A.32, Y.33, G.37, S.38, S.39, L.40
- Chain U: P.196, F.197, Q.199, L.200, A.203, F.285, F.300, N.301, F.302, S.305
- Chain W: L.392, N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain X: N.72, F.73, L.74
- Ligands: CLA.100, SQD.107, CLA.145, CLA.149, DGD.157, LMG.172
- Chain a: Q.60
14 PLIP interactions:6 interactions with chain U, 5 interactions with chain W, 2 interactions with chain 2, 1 interactions with chain a- Hydrophobic interactions: U:Q.199, U:L.200, U:A.203, U:F.300, 2:F.29
- Hydrogen bonds: U:S.305, U:S.305, W:N.393, W:N.403, W:N.403, W:S.404, W:S.404, 2:A.32, a:Q.60
DGD.176: 45 residues within 4Å:- Chain 0: L.46, Y.49, N.50, V.60, S.61, W.62, K.63
- Chain V: Y.193, F.246, F.250, V.251, A.253, G.254, T.255, W.257, Y.258, T.271, Y.273, Q.274, S.277, Y.279, T.452, A.456, L.460, F.463
- Chain X: G.86, H.87, L.89, L.116, A.119, F.120, I.123, I.150, V.154, L.158, I.159, L.162, G.163, S.165, W.167, A.290, L.291
- Ligands: CLA.114, CLA.120, CLA.121
21 PLIP interactions:7 interactions with chain V, 6 interactions with chain X, 8 interactions with chain 0- Hydrophobic interactions: V:W.257, V:Y.258, V:T.452, V:L.460, V:F.463, X:I.123, X:L.162, X:L.291, 0:Y.49, 0:Y.49, 0:Y.49
- Hydrogen bonds: V:Y.193, V:Y.273, X:H.87, X:S.165, 0:N.50, 0:S.61, 0:S.61, 0:W.62, 0:W.62
- Water bridges: X:G.86
- 22 x BCR: BETA-CAROTENE(Non-covalent)
BCR.29: 23 residues within 4Å:- Chain 8: F.8, F.19
- Chain B: A.21, A.22, M.25, L.29, F.108, A.111, C.112, W.115
- Chain L: L.6, I.9, A.10, L.13
- Ligands: CLA.19, CLA.25, CLA.26, BCR.30, SQD.34, STE.36, LHG.85, LMG.87, BCR.184
Ligand excluded by PLIPBCR.30: 24 residues within 4Å:- Chain B: L.29, V.30, G.32, W.33, S.36, I.101, V.102, S.104, G.105, L.106, F.108, L.109, F.458
- Ligands: CLA.16, CLA.19, CLA.23, CLA.25, BCR.29, SQD.34, LMG.87, LMG.111, BCR.184, STE.186, STE.187
Ligand excluded by PLIPBCR.31: 19 residues within 4Å:- Chain 8: F.18, F.22, F.23
- Chain B: W.91, L.103, L.106, L.107, L.109, A.110, C.112, W.113, V.116, Y.117
- Ligands: CLA.17, CLA.18, CLA.27, CLA.28, STE.32, SQD.185
Ligand excluded by PLIPBCR.52: 25 residues within 4Å:- Chain C: I.197, F.198, Y.200, L.201, I.212, V.215, D.220, V.221, G.224, H.225, W.227, I.228, I.231, A.251, F.252, M.269
- Chain H: F.19, V.20, F.23, L.24
- Ligands: CLA.39, CLA.43, CLA.44, CLA.45, DGD.54
Ligand excluded by PLIPBCR.53: 37 residues within 4Å:- Chain C: A.40, A.43, H.44, G.46, L.47, F.50, L.57, F.100, V.104, L.107, I.108, S.110, A.111, G.114, V.118, A.121, I.122
- Chain J: Y.15, F.18, L.21, V.22, L.25, F.32, L.35, A.36, W.39
- Chain T: L.9, L.12, V.13, S.16, V.20, W.47, V.54
- Ligands: CLA.49, BCR.82, BCR.83, STE.97
Ligand excluded by PLIPBCR.66: 23 residues within 4Å:- Chain D: Y.42, L.43, G.46, G.47, L.49, T.50, F.101, W.104, L.110, F.113
- Chain F: T.25, L.26, P.29, T.30, F.33, L.34, I.37
- Chain I: V.21, V.25, F.28
- Ligands: PL9.8, CLA.65, LMG.68
Ligand excluded by PLIPBCR.76: 21 residues within 4Å:- Chain B: P.187, V.208
- Chain G: M.31, F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Chain R: T.2, I.3, L.7, F.11
- Ligands: CLA.14, CLA.15, CLA.21, CLA.22, CLA.75, STE.78
Ligand excluded by PLIPBCR.79: 30 residues within 4Å:- Chain A: F.17, W.20, V.21, V.30, G.34, V.35, I.38, P.39, L.42, A.43, I.46, C.47, I.50, A.51, A.54, A.55, P.56, I.96, L.102, W.105, L.106, P.111, L.114
- Chain H: F.14, F.15, L.18
- Chain V: W.75
- Ligands: CLA.5, DGD.13, STE.80
Ligand excluded by PLIPBCR.82: 20 residues within 4Å:- Chain C: F.97, F.100, V.101, V.104, V.105, I.108, S.109, V.112, L.113, F.135
- Chain J: Y.15
- Chain T: V.51, V.54, G.55, N.58, F.59
- Ligands: CLA.50, CLA.51, BCR.53, STE.58
Ligand excluded by PLIPBCR.83: 31 residues within 4Å:- Chain C: F.50, L.107
- Chain I: W.11, A.14, T.15, G.18, M.19, I.22
- Chain J: L.21, L.25, I.28, L.31, F.32, A.34, L.35, F.37, V.38, A.41, F.45
- Chain S: I.28, G.29, A.31, G.32, P.33
- Chain T: V.13, S.16, F.17, V.20
- Ligands: SQD.10, CLA.49, BCR.53
Ligand excluded by PLIPBCR.92: 28 residues within 4Å:- Chain A: L.28
- Chain O: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain V: W.33, S.36, M.37, Y.40, F.108, L.109
- Ligands: SQD.12, DGD.13, LHG.70, SQD.84, CLA.119, CLA.126, BCR.129, BCR.130, STE.132, STE.137, STE.138
Ligand excluded by PLIPBCR.103: 30 residues within 4Å:- Chain 1: F.14, F.15, L.18
- Chain B: W.75
- Chain U: F.17, W.20, V.30, G.34, V.35, I.38, P.39, L.42, A.43, I.46, C.47, I.50, A.51, A.54, A.55, P.56, I.96, L.102, W.105, L.106, P.111, L.114
- Ligands: CLA.102, STE.109, STE.110, LMG.111
Ligand excluded by PLIPBCR.129: 23 residues within 4Å:- Chain 5: L.6, I.9, A.10, L.13
- Chain O: F.19, F.23
- Chain V: A.21, A.22, M.25, L.29, F.108, A.111, C.112, W.115
- Ligands: SQD.84, BCR.92, CLA.119, CLA.125, CLA.126, BCR.130, STE.137, LHG.182, LMG.183
Ligand excluded by PLIPBCR.130: 24 residues within 4Å:- Chain V: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105, L.106, F.108, L.109, F.458
- Ligands: DGD.13, SQD.84, BCR.92, CLA.116, CLA.119, CLA.123, CLA.125, BCR.129, STE.132, STE.138, LHG.182, LMG.183
Ligand excluded by PLIPBCR.131: 19 residues within 4Å:- Chain O: F.18, F.22, F.23
- Chain V: W.91, L.103, L.106, L.107, L.109, A.110, C.112, W.113, V.116, Y.117
- Ligands: SQD.12, CLA.117, CLA.118, CLA.127, CLA.128, STE.133
Ligand excluded by PLIPBCR.155: 25 residues within 4Å:- Chain 1: F.19, V.20, F.23, L.24
- Chain W: I.197, F.198, Y.200, L.201, I.212, V.215, D.220, V.221, G.224, H.225, W.227, I.228, I.231, A.251, F.252, M.269, F.277
- Ligands: CLA.142, CLA.146, CLA.147, CLA.148
Ligand excluded by PLIPBCR.168: 23 residues within 4Å:- Chain 2: V.21, V.25, F.28
- Chain X: Y.42, L.43, G.46, G.47, L.49, T.50, F.101, W.104, L.110, F.113
- Chain Z: T.25, L.26, P.29, T.30, F.33, L.34, I.37
- Ligands: DGD.157, CLA.167, LMG.172
Ligand excluded by PLIPBCR.178: 20 residues within 4Å:- Chain 3: Y.15
- Chain W: F.97, F.100, V.101, V.104, V.105, I.108, S.109, V.112, L.113, F.135
- Ligands: CLA.153, CLA.154, STE.160, BCR.180
- Chain d: V.51, V.54, G.55, N.58, F.59
Ligand excluded by PLIPBCR.179: 32 residues within 4Å:- Chain 2: W.11, A.14, T.15, G.18, M.19, I.22
- Chain 3: L.21, L.25, I.28, L.31, F.32, A.34, L.35, F.37, V.38, A.41, F.45
- Chain W: F.50, L.107
- Ligands: SQD.107, CLA.152, BCR.180, STE.181
- Chain c: I.28, G.29, A.31, G.32, P.33
- Chain d: V.13, S.16, F.17, V.20
Ligand excluded by PLIPBCR.180: 36 residues within 4Å:- Chain 3: Y.15, F.18, L.21, V.22, L.25, F.32, L.35, A.36, W.39
- Chain W: A.40, A.43, H.44, G.46, L.47, F.50, L.57, F.100, V.104, L.107, I.108, S.110, A.111, G.114, V.118, A.121, I.122
- Ligands: CLA.152, BCR.178, BCR.179
- Chain d: L.9, L.12, V.13, S.16, V.20, W.47, V.54
Ligand excluded by PLIPBCR.184: 27 residues within 4Å:- Chain 8: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain B: W.33, S.36, M.37, Y.40, F.108, L.109
- Chain U: L.28
- Ligands: CLA.19, CLA.26, BCR.29, BCR.30, SQD.34, STE.36, LHG.170, SQD.185, STE.186, STE.187
Ligand excluded by PLIPBCR.189: 19 residues within 4Å:- Chain 0: M.31, F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Chain V: P.187
- Ligands: CLA.113, CLA.114, CLA.115, CLA.121, CLA.122
- Chain b: T.2, I.3, L.7, F.11
Ligand excluded by PLIP- 35 x STE: STEARIC ACID(Non-covalent)(Non-functional Binders)
STE.32: 7 residues within 4Å:- Chain B: W.91, L.149
- Ligands: CLA.16, CLA.17, CLA.18, CLA.27, BCR.31
Ligand excluded by PLIPSTE.35: 5 residues within 4Å:- Chain B: P.183, E.184, W.185, G.186
- Ligands: CLA.75
Ligand excluded by PLIPSTE.36: 16 residues within 4Å:- Chain 5: L.8, T.11, A.12
- Chain 8: M.1, I.4, T.5, F.8, I.9
- Chain B: Y.40
- Chain L: L.6, I.9
- Ligands: CLA.19, CLA.26, BCR.29, LMG.87, BCR.184
Ligand excluded by PLIPSTE.37: 8 residues within 4Å:- Chain B: L.148, F.151, I.207, I.210, I.211, L.214, L.218
- Ligands: STE.38
Ligand excluded by PLIPSTE.38: 7 residues within 4Å:- Chain B: I.211, L.214, F.215, L.218, V.219
- Ligands: STE.37, STE.78
Ligand excluded by PLIPSTE.57: 3 residues within 4Å:- Chain C: L.192, I.226, L.230
Ligand excluded by PLIPSTE.58: 13 residues within 4Å:- Chain C: V.49, W.85, F.97, P.98, V.101, V.102, V.105, H.106, S.109, L.113
- Ligands: CLA.41, CLA.51, BCR.82
Ligand excluded by PLIPSTE.59: 5 residues within 4Å:- Chain C: L.192, D.193, P.194, R.195, W.227
Ligand excluded by PLIPSTE.78: 11 residues within 4Å:- Chain B: V.208, I.211, F.215
- Chain G: L.30, F.34, L.37
- Ligands: CLA.14, CLA.21, STE.38, CLA.75, BCR.76
Ligand excluded by PLIPSTE.80: 8 residues within 4Å:- Chain A: I.96, L.102
- Chain H: M.1, L.4
- Ligands: CLA.5, DGD.13, BCR.79, CLA.118
Ligand excluded by PLIPSTE.81: 6 residues within 4Å:- Chain I: G.26, F.29, Y.30, Y.33
- Ligands: DGD.55, LMG.96
Ligand excluded by PLIPSTE.86: 7 residues within 4Å:- Chain 5: I.23, Y.26, V.27
- Chain K: R.7
- Ligands: CLA.26, SQD.34, STE.88
Ligand excluded by PLIPSTE.88: 14 residues within 4Å:- Chain 5: L.16, V.20, I.23, V.27
- Chain K: R.7, V.10
- Chain L: V.17, V.20, F.21, I.24, L.25, Q.28
- Ligands: CLA.26, STE.86
Ligand excluded by PLIPSTE.89: 6 residues within 4Å:- Chain L: I.23, Y.26, V.27
- Ligands: SQD.84, STE.90, CLA.126
Ligand excluded by PLIPSTE.90: 17 residues within 4Å:- Chain 4: R.7, P.9, V.10
- Chain 5: V.17, V.20, F.21, I.24, L.25, Q.28, Q.32
- Chain L: V.20, I.23, V.27, E.30, S.31
- Ligands: STE.89, CLA.126
Ligand excluded by PLIPSTE.91: 8 residues within 4Å:- Chain E: F.37, L.42, V.46
- Chain F: F.32
- Chain N: D.2, V.5, V.8, L.9
Ligand excluded by PLIPSTE.95: 11 residues within 4Å:- Chain D: L.92, W.93, Q.98, G.99
- Chain R: I.12, S.16, G.17, V.20, L.21
- Ligands: CLA.20, CLA.65
Ligand excluded by PLIPSTE.97: 11 residues within 4Å:- Chain C: A.111, V.112, F.115
- Chain T: S.16, M.19, S.44, W.47, I.48
- Ligands: CLA.49, CLA.51, BCR.53
Ligand excluded by PLIPSTE.109: 4 residues within 4Å:- Chain U: R.16, F.17, W.20
- Ligands: BCR.103
Ligand excluded by PLIPSTE.110: 11 residues within 4Å:- Chain B: L.39, L.42, A.43, W.75, E.94
- Chain U: A.54, L.72, Y.73
- Ligands: BCR.103, LMG.111, STE.187
Ligand excluded by PLIPSTE.132: 16 residues within 4Å:- Chain A: L.72
- Chain O: M.1, T.3, I.4, V.7, F.8, A.11
- Chain V: S.36, L.39, Y.40, A.43, T.44
- Ligands: BCR.92, BCR.130, STE.137, STE.138
Ligand excluded by PLIPSTE.133: 9 residues within 4Å:- Chain V: G.89, F.90, W.91, L.149
- Ligands: DGD.13, CLA.116, CLA.117, CLA.118, BCR.131
Ligand excluded by PLIPSTE.136: 12 residues within 4Å:- Chain 0: M.35
- Chain V: A.228, L.229, R.230, L.474
- Chain X: K.23, R.134
- Ligands: CLA.120, CLA.121, STE.140, STE.141, STE.173
Ligand excluded by PLIPSTE.137: 15 residues within 4Å:- Chain 5: L.6
- Chain L: L.8, T.11, A.12
- Chain O: M.1, I.4, T.5, F.8
- Chain V: Y.40
- Ligands: BCR.92, CLA.119, CLA.126, BCR.129, STE.132, LMG.183
Ligand excluded by PLIPSTE.138: 17 residues within 4Å:- Chain A: V.49, I.50, I.53, A.54, L.72
- Chain O: V.7, F.10, A.11, I.14
- Chain V: L.39, L.42, A.43, E.94
- Ligands: DGD.13, BCR.92, BCR.130, STE.132
Ligand excluded by PLIPSTE.139: 6 residues within 4Å:- Chain V: I.211, L.214, F.215, L.218, V.219
- Ligands: LMG.134
Ligand excluded by PLIPSTE.140: 14 residues within 4Å:- Chain 0: W.25, T.28, M.31, A.32, M.35, G.36
- Chain V: R.224, L.225, A.228
- Chain X: F.15
- Ligands: CLA.121, STE.136, STE.141, CLA.167
Ligand excluded by PLIPSTE.141: 11 residues within 4Å:- Chain V: R.224, K.227
- Chain X: F.15, D.16, D.19, K.23, W.32
- Ligands: STE.136, STE.140, STE.173
- Chain b: F.25
Ligand excluded by PLIPSTE.160: 14 residues within 4Å:- Chain W: V.49, W.85, F.97, P.98, V.101, V.102, V.105, H.106, S.109, L.113
- Ligands: CLA.143, CLA.144, CLA.154, BCR.178
Ligand excluded by PLIPSTE.173: 16 residues within 4Å:- Chain V: L.474
- Chain X: K.23, W.32, S.33, I.35, L.36, L.127, F.130, E.131, R.134
- Ligands: CLA.120, STE.136, STE.141, CLA.167
- Chain b: L.21, F.25
Ligand excluded by PLIPSTE.177: 8 residues within 4Å:- Chain 2: I.22, V.25, G.26, F.29, Y.30, Y.33
- Ligands: DGD.157, LMG.159
Ligand excluded by PLIPSTE.181: 5 residues within 4Å:- Chain 3: F.37, F.45
- Chain W: W.23
- Ligands: SQD.107, BCR.179
Ligand excluded by PLIPSTE.186: 14 residues within 4Å:- Chain 8: M.1, T.3, I.4, V.7, F.8
- Chain B: S.36, L.39, Y.40, A.43, T.44
- Chain U: L.72
- Ligands: BCR.30, BCR.184, STE.187
Ligand excluded by PLIPSTE.187: 13 residues within 4Å:- Chain 8: V.7, F.10, A.11, I.14
- Chain B: L.39, I.101
- Chain U: V.49, I.53, A.54
- Ligands: BCR.30, STE.110, BCR.184, STE.186
Ligand excluded by PLIPSTE.190: 13 residues within 4Å:- Chain X: L.92, W.93, Q.98, G.99
- Ligands: CLA.120, CLA.167
- Chain b: G.9, I.12, G.13, S.16, G.17, V.20, L.21
Ligand excluded by PLIP- 2 x OEX: CA-MN4-O5 CLUSTER(Covalent)
OEX.60: 12 residues within 4Å:- Chain A: D.61, S.169, D.170, V.185, E.189, H.332, E.333, H.337, D.342, A.344
- Chain C: E.342, R.345
21 PLIP interactions:12 interactions with chain A, 5 interactions with chain C, 4 Ligand-Water interactions- Hydrogen bonds: A:H.337, C:R.345, C:R.345
- Water bridges: A:S.169
- Metal complexes: A:D.170, A:D.170, A:E.189, A:H.332, A:E.333, A:E.333, A:E.333, A:D.342, A:D.342, A:A.344, C:E.342, C:E.342, C:E.342, H2O.1, H2O.1, H2O.2, H2O.13
OEX.112: 12 residues within 4Å:- Chain U: D.61, S.169, D.170, V.185, E.189, H.332, E.333, H.337, D.342, A.344
- Chain W: E.342, R.345
22 PLIP interactions:13 interactions with chain U, 5 interactions with chain W, 4 Ligand-Water interactions- Hydrogen bonds: U:H.337, W:R.345, W:R.345
- Water bridges: U:S.169, U:S.169
- Metal complexes: U:D.170, U:D.170, U:E.189, U:E.189, U:H.332, U:E.333, U:E.333, U:D.342, U:D.342, U:A.344, W:E.342, W:E.342, W:E.342, H2O.29, H2O.30, H2O.31, H2O.32
- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.62: 12 residues within 4Å:- Chain A: H.215, V.219, E.244, Y.246, S.268, H.272
- Chain D: H.214, V.218, Y.244, K.264, H.268
- Ligands: FE2.1
5 PLIP interactions:3 interactions with chain D, 2 interactions with chain A- Hydrogen bonds: D:H.214, D:Y.244, D:H.268, A:Y.246, A:H.272
BCT.164: 12 residues within 4Å:- Chain U: H.215, V.219, E.244, Y.246, S.268, H.272
- Chain X: H.214, V.218, Y.244, K.264, H.268
- Ligands: FE2.98
6 PLIP interactions:3 interactions with chain X, 3 interactions with chain U- Hydrogen bonds: X:H.214, X:Y.244, X:H.268, U:H.215, U:Y.246, U:H.272
- 4 x HEC: HEME C(Non-covalent)(Covalent)
HEC.74: 25 residues within 4Å:- Chain E: F.10, I.13, I.14, S.16, R.18, Y.19, I.22, H.23, T.26, I.27, L.30
- Chain F: I.15, F.16, R.19, W.20, V.23, H.24, A.27, V.28, I.31
- Chain N: V.12, A.15, A.16, A.19, I.23
23 PLIP interactions:11 interactions with chain F, 2 interactions with chain N, 10 interactions with chain E,- Hydrophobic interactions: F:I.15, F:W.20, F:V.23, F:A.27, F:I.31, N:A.15, N:A.19, E:I.13, E:I.22, E:T.26, E:I.27, E:L.30
- Water bridges: F:R.19, E:R.8
- Salt bridges: F:R.19, E:R.18
- pi-Stacking: F:W.20, F:W.20, F:H.24, E:Y.19
- Metal complexes: F:H.24, E:H.23
- pi-Cation interactions: E:H.23
HEC.93: 30 residues within 4Å:- Chain C: A.381, T.385
- Chain Q: F.59, A.62, C.63, S.65, C.66, H.67, T.72, T.74, N.75, L.78, D.79, L.80, T.84, L.85, A.88, R.92, L.98, Y.101, M.102, T.107, Y.108, I.114, H.118, P.119, F.127, M.130, I.141, I.145
18 PLIP interactions:18 interactions with chain Q,- Hydrophobic interactions: Q:A.62, Q:T.72, Q:L.78, Q:L.80, Q:L.98, Q:Y.101, Q:I.114, Q:P.119, Q:I.141, Q:I.145
- Hydrogen bonds: Q:D.79, Q:Y.108
- Water bridges: Q:T.106
- pi-Stacking: Q:H.67, Q:Y.101, Q:H.118
- Metal complexes: Q:H.67, Q:H.118
HEC.174: 24 residues within 4Å:- Chain 7: A.15, A.16, A.19, I.23
- Chain Y: R.8, F.10, I.13, S.16, R.18, Y.19, I.22, H.23, T.26, I.27, L.30
- Chain Z: I.15, F.16, R.19, W.20, V.23, H.24, A.27, V.28, I.31
24 PLIP interactions:3 interactions with chain 7, 12 interactions with chain Y, 9 interactions with chain Z,- Hydrophobic interactions: 7:A.19, 7:I.23, 7:I.23, Y:F.10, Y:I.13, Y:T.26, Y:I.27, Y:L.30, Z:I.15, Z:W.20, Z:A.27
- Hydrogen bonds: Y:S.16, Z:I.15
- Salt bridges: Y:R.8, Y:R.18, Z:R.19
- pi-Stacking: Y:Y.19, Y:H.23, Y:H.23, Z:H.24
- Metal complexes: Y:H.23, Z:H.24
- Water bridges: Z:T.17
- pi-Cation interactions: Z:H.24
HEC.188: 30 residues within 4Å:- Chain W: A.381
- Chain a: F.59, A.62, C.63, S.65, C.66, H.67, T.72, T.74, N.75, L.78, D.79, L.80, T.84, L.85, A.88, R.92, L.98, Y.101, M.102, T.106, T.107, Y.108, I.114, H.118, P.119, F.127, M.130, I.141, I.145
17 PLIP interactions:17 interactions with chain a,- Hydrophobic interactions: a:A.62, a:T.72, a:L.78, a:L.85, a:L.98, a:Y.101, a:Y.101, a:I.114, a:I.141, a:I.145
- Hydrogen bonds: a:D.79, a:Y.108
- Water bridges: a:N.75
- pi-Stacking: a:H.67, a:Y.101
- Metal complexes: a:H.67, a:H.118
- 1 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ibrahim, M. et al., Untangling the sequence of events during the S2→ S3transition in photosystem II and implications for the water oxidation mechanism. Proc.Natl.Acad.Sci.USA (2020)
- Release Date
- 2020-05-20
- Peptides
- Photosystem II protein D1 1: AU
Photosystem II CP47 reaction center protein: BV
Photosystem II CP43 reaction center protein: CW
Photosystem II D2 protein: DX
Cytochrome b559 subunit alpha: EY
Cytochrome b559 subunit beta: FZ
Photosystem II reaction center protein H: G0
Photosystem II reaction center protein I: H1
Photosystem II reaction center protein J: I2
Photosystem II reaction center protein K: J3
Photosystem II reaction center protein L: K4
Photosystem II reaction center protein M: L5
Photosystem II manganese-stabilizing polypeptide: M6
Photosystem II protein Y: N7
Photosystem II reaction center protein T: O8
Photosystem II 12 kDa extrinsic protein: P9
Cytochrome c-550: Qa
Photosystem II reaction center X protein: Rb
Photosystem II reaction center protein Ycf12: Sc
Photosystem II reaction center protein Z: Td - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AU
aB
BV
bC
CW
cD
DX
dE
EY
eF
FZ
fG
H0
hH
I1
iI
J2
jJ
K3
kK
L4
lL
M5
mM
O6
oN
R7
rO
T8
tP
U9
uQ
Va
vR
Xb
xS
Yc
yT
Zd
z - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 6w1q.1
RT XFEL structure of Photosystem II 50 microseconds after the second illumination at 2.27 Angstrom resolution
Photosystem II protein D1 1
Toggle Identical (AU)Photosystem II CP47 reaction center protein
Toggle Identical (BV)Photosystem II CP43 reaction center protein
Photosystem II D2 protein
Toggle Identical (DX)Cytochrome b559 subunit alpha
Toggle Identical (EY)Cytochrome b559 subunit beta
Toggle Identical (FZ)Photosystem II reaction center protein H
Photosystem II reaction center protein I
Toggle Identical (H1)Photosystem II reaction center protein J
Toggle Identical (I2)Photosystem II reaction center protein K
Toggle Identical (J3)Photosystem II reaction center protein L
Photosystem II reaction center protein M
Photosystem II manganese-stabilizing polypeptide
Toggle Identical (M6)Photosystem II protein Y
Photosystem II reaction center protein T
Toggle Identical (O8)Photosystem II 12 kDa extrinsic protein
Toggle Identical (P9)Cytochrome c-550
Toggle Identical (Qa)Photosystem II reaction center X protein
Photosystem II reaction center protein Ycf12
Photosystem II reaction center protein Z
Toggle Identical (Td)Related Entries With Identical Sequence
1izl.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1 more...less...5e79.1 | 5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kaf.1 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1 | 9evx.1