- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x C- U- U: mRNA(Non-functional Binders)
- 1 x 6UQ: (2R,3S,4R,6S)-4-hydroxy-6-{[(2R,3aR,4R,4'R,5'S,6S,6'R,7aR)-4'-hydroxy-6-{[(2S,3R,4R,5S,6R)-3-hydroxy-2-{[(2R,3S,4S,5S,6S)-4-hydroxy-6-({(2R,3aS,3a'R,6S,6'R,7R,7'R,7aR,7a'R)-7'-hydroxy-7'-[(1S)-1-hydroxyethyl]-6'-methyl-7-[(2-methylpropanoyl)oxy]octahydro-4H-2,4'-spirobi[[1,3]dioxolo[4,5-c]pyran]-6-yl}oxy)-5-methoxy-2-(methoxymethyl)tetrahydro-2H-pyran-3-yl]oxy}-5-methoxy-6-methyltetrahydro-2H-pyran-4-yl]oxy}-4,6',7a-trimethyloctahydro-4H-spiro[1,3-dioxolo[4,5-c]pyran-2,2'-pyran]-5'-yl]oxy}-2-methyltetrahydro-2H-pyran-3-yl 3,5-dichloro-4-hydroxy-2-methoxy-6-methylbenzoate (non-preferred name)(Non-covalent)
- 1 x ZN: ZINC ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Arenz, S. et al., Structures of the orthosomycin antibiotics avilamycin and evernimicin in complex with the bacterial 70S ribosome. Proc.Natl.Acad.Sci.USA (2016)
- Release Date
- 2016-08-17
- Peptides
- 50S ribosomal protein L2: C
50S ribosomal protein L3: D
50S ribosomal protein L4: E
50S ribosomal protein L5: F
50S ribosomal protein L6: G
50S ribosomal protein L9: H
50S ribosomal protein L10: I
50S ribosomal protein L11: J
50S ribosomal protein L13: K
50S ribosomal protein L14: L
50S ribosomal protein L15: M
50S ribosomal protein L16: N
50S ribosomal protein L17: O
50S ribosomal protein L18: P
50S ribosomal protein L19: Q
50S ribosomal protein L20: R
50S ribosomal protein L21: S
50S ribosomal protein L22: T
50S ribosomal protein L23: U
50S ribosomal protein L24: V
50S ribosomal protein L25: W
50S ribosomal protein L27: X
50S ribosomal protein L28: Y
50S ribosomal protein L29: Z
50S ribosomal protein L30: 0
50S ribosomal protein L32: 1
50S ribosomal protein L33: 2
50S ribosomal protein L34: 3
50S ribosomal protein L35: 4
50S ribosomal protein L36: 5
30S ribosomal protein S2: 7
30S ribosomal protein S3: 8
30S ribosomal protein S4: 9
30S ribosomal protein S5: a
30S ribosomal protein S6: b
30S ribosomal protein S7: c
30S ribosomal protein S8: d
30S ribosomal protein S9: e
30S ribosomal protein S10: f
30S ribosomal protein S11: g
30S ribosomal protein S12: h
30S ribosomal protein S13: i
30S ribosomal protein S14: j
30S ribosomal protein S15: k
30S ribosomal protein S16: l
30S ribosomal protein S17: m
30S ribosomal protein S18: n
30S ribosomal protein S19: o
30S ribosomal protein S20: p
30S ribosomal protein S21: q - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:C
1DD
1EE
1FF
1GG
1HH
1II
1JJ
1KK
1NL
1OM
1PN
1QO
1RP
1SQ
1TR
1US
1VT
1WU
1XV
1YW
1ZX
10Y
11Z
120
131
152
163
174
185
197
1b8
1c9
1da
1eb
1fc
1gd
1he
1if
1jg
1kh
1li
1mj
1nk
1ol
1pm
1qn
1ro
1sp
1tq
1u