SMTL ID : 8iu2.1

Cryo-EM structure of Long-wave-sensitive opsin 1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x RET: RETINAL(Covalent)

RET.1: 11 residues within 4Å: Chain A: E.102, V.133, I.138, P.205, M.220, L.223, C.228, W.281, Y.284, T.285, K.312 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.133, A:I.138, A:P.205, A:L.223, A:W.281, A:Y.284, A:Y.284, A:T.285, A:K.312

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, J. et al., Cryo-EM structure of Long-wave-sensitive opsin 1. To Be Published

Release Date

2024-03-27

Peptides

Long-wave-sensitive opsin 1: A
Guanine nucleotide-binding protein G(i) subunit alpha-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: C
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: D
scFv Recombinant Human Monoclonal Antibody (scFv16): E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

B
A

C
B

D
G

E
S

Membrane

We predict this structure to be a membrane protein.
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Long-wave-sensitive opsin 1

Guanine nucleotide-binding protein G(i) subunit alpha-1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

scFv Recombinant Human Monoclonal Antibody (scFv16)

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