8qsf.1 | SWISS-MODEL Template Library

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SMTL ID : 8qsf.1

Ternary structure of 14-3-3s, BRAF phosphopeptide (pS365) and compound 22 (1083853).

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-2-2-mer

Ligands

2 x WPN: ~{N}-[[1-(4-bromophenyl)sulfonylpiperidin-4-yl]methyl]-2-chloranyl-ethanamide

WPN.1:	13 residues within 4Å: Chain A: C.43, R.46, N.47, E.120, F.124, K.127, P.172, I.173, D.220, L.223, I.224 Chain B: P.7, V.9 8 PLIP interactions: 7 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:F.124, A:I.173, A:I.224, B:V.9 Hydrogen bonds: A:R.46 Water bridges: A:S.50, A:D.131, A:N.180
WPN.6:	13 residues within 4Å: Chain C: C.43, R.46, N.47, E.120, F.124, K.127, P.172, I.173, D.220, L.223, I.224 Chain D: P.7, V.9 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:F.124, C:I.173, C:I.224 Hydrogen bonds: C:R.46 Water bridges: C:K.127

7 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.2:	1 residues within 4Å: Chain A: E.94 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:E.94, H₂O.1, H₂O.2, H₂O.7, H₂O.8
MG.3:	1 residues within 4Å: Chain A: E.80 No protein-ligand interaction detected (PLIP)
MG.4:	1 residues within 4Å: Chain A: K.37 No protein-ligand interaction detected (PLIP)
MG.8:	1 residues within 4Å: Chain C: E.166 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:E.166, H₂O.11, H₂O.14, H₂O.14
MG.9:	1 residues within 4Å: Chain C: E.94 5 PLIP interactions: 1 interactions with chain C, 4 Ligand-Water interactions Metal complexes: C:E.94, H₂O.11, H₂O.14, H₂O.14, H₂O.15
MG.10:	2 residues within 4Å: Chain C: E.77, S.79 No protein-ligand interaction detected (PLIP)
MG.11:	0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.5:	3 residues within 4Å: Chain A: K.14 Chain C: Y.89, K.92 Ligand excluded by PLIP
CL.7:	4 residues within 4Å: Chain A: E.88, Y.89, K.92 Chain C: K.14 Ligand excluded by PLIP

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Konstantinidou, M. et al., Small molecule stabilization of the 14-3-3sigma/CRAF complex inhibits the MAPK pathway. To Be Published

Release Date

2025-04-23

Peptides

14-3-3 protein sigma: AC
BRAF peptide pS365: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
J

B
H

D
S

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

14-3-3 protein sigma

Toggle Identical (AC)

BRAF peptide pS365

Toggle Identical (BD)

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