- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 2 x FE2: FE (II) ION(Non-covalent)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.3: 29 residues within 4Å:- Chain A: F.119, Y.147, P.150, S.153, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, I.290
- Chain D: L.182, L.205, F.257
- Chain M: F.17
- Ligands: CLA.4, CLA.5, PHO.6, CLA.75, LHG.80
17 PLIP interactions:12 interactions with chain A, 1 interactions with chain M, 4 interactions with chain D,- Hydrophobic interactions: A:F.119, A:F.186, A:Q.187, A:I.192, A:I.192, A:L.193, A:V.205, A:F.206, A:F.206, M:F.17, D:L.182, D:L.182, D:L.205, D:F.257
- Hydrogen bonds: A:S.153
- Water bridges: A:I.290
- Metal complexes: A:H.198
CLA.4: 24 residues within 4Å:- Chain A: T.45, F.48, F.119, V.157, M.172, I.176, T.179, F.180, F.182, M.183
- Chain D: M.198, V.201, A.202, L.205, G.206
- Chain K: L.30
- Chain M: F.10
- Ligands: CLA.3, PHO.6, SQD.11, CLA.75, PL9.78, LHG.80, LHG.99
9 PLIP interactions:6 interactions with chain A, 1 interactions with chain M, 1 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: A:T.45, A:F.48, A:F.119, A:V.157, A:F.180, A:F.182, M:F.10, D:V.201
- Metal complexes: H2O.2
CLA.5: 19 residues within 4Å:- Chain A: Q.199, V.202, A.203, F.206, G.207, L.210, W.278
- Chain D: F.157, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.3, PL9.10, LFA.14, PHO.68, CLA.75, LMG.81
12 PLIP interactions:4 interactions with chain A, 7 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: A:V.202, A:L.210, A:W.278, D:F.157, D:I.178, D:I.178, D:F.179, D:F.181, D:L.182, D:L.182
- pi-Stacking: A:F.206
- Metal complexes: H2O.3
CLA.7: 29 residues within 4Å:- Chain A: V.35, I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, L.114, F.117, H.118, L.121
- Chain H: V.8, Y.9, V.11, V.12, T.13, F.15, V.16, F.19, V.20
- Ligands: BCR.8, LMG.47, CLA.53, CLA.54, BCR.62, PLM.91, PLM.92
21 PLIP interactions:13 interactions with chain A, 8 interactions with chain H,- Hydrophobic interactions: A:P.39, A:P.39, A:T.40, A:F.93, A:P.95, A:I.96, A:W.97, A:W.97, A:L.114, A:L.121, H:Y.9, H:V.11, H:T.13, H:F.15, H:F.15, H:V.16, H:F.19, H:V.20
- Hydrogen bonds: A:I.96
- Salt bridges: A:H.118
- Metal complexes: A:H.118
CLA.18: 11 residues within 4Å:- Chain B: W.185, G.186, P.187, F.190
- Chain G: F.41, I.44, I.48, L.55
- Ligands: CLA.19, PLM.43, RRX.87
9 PLIP interactions:4 interactions with chain B, 4 interactions with chain G, 1 Ligand-Water interactions,- Hydrophobic interactions: B:W.185, B:P.187, B:F.190, B:F.190, G:F.41, G:F.41, G:I.48, G:L.55
- Metal complexes: H2O.4
CLA.19: 30 residues within 4Å:- Chain B: W.185, G.189, F.190, P.192, G.197, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250, V.251, T.255
- Chain D: V.154, L.158, I.159, L.162
- Chain G: F.38, F.41, I.45, L.46, Y.49
- Ligands: CLA.18, CLA.20, CLA.22, CLA.26, RRX.87, DGD.88
26 PLIP interactions:16 interactions with chain B, 4 interactions with chain D, 6 interactions with chain G,- Hydrophobic interactions: B:W.185, B:F.190, B:F.190, B:P.192, B:A.200, B:H.201, B:A.205, B:V.208, B:V.208, B:F.246, B:F.247, B:F.247, B:F.250, B:F.250, D:V.154, D:L.158, D:I.159, D:L.162, G:F.38, G:F.41, G:I.45, G:I.45, G:I.45, G:L.46
- pi-Stacking: B:H.201
- Metal complexes: B:H.201
CLA.20: 28 residues within 4Å:- Chain B: R.68, L.69, A.146, L.149, C.150, F.153, L.158, M.166, V.198, H.201, H.202, A.244, F.247, A.248, V.251, V.252, T.262
- Chain G: M.35, F.38, L.39, L.42
- Ligands: CLA.19, CLA.21, CLA.22, CLA.23, CLA.25, CLA.27, RRX.87
18 PLIP interactions:16 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: B:L.69, B:L.149, B:L.149, B:F.153, B:F.153, B:A.244, B:F.247, B:F.247, B:A.248, B:V.251, G:L.39, G:L.42
- Hydrogen bonds: B:R.68
- Water bridges: B:T.262
- Salt bridges: B:R.68
- pi-Stacking: B:H.202
- pi-Cation interactions: B:H.201
- Metal complexes: B:H.202
CLA.21: 26 residues within 4Å:- Chain B: W.33, F.61, F.65, R.68, L.145, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.20, CLA.22, CLA.23, CLA.24, CLA.28, CLA.29, CLA.30, CLA.32, BCR.35, LFA.38, LFA.42
22 PLIP interactions:22 interactions with chain B,- Hydrophobic interactions: B:W.33, B:F.61, B:F.65, B:L.145, B:L.149, B:L.149, B:V.245, B:A.248, B:A.249, B:V.252, B:F.451, B:F.458, B:F.458, B:F.458, B:F.462, B:F.462
- Salt bridges: B:R.68
- pi-Stacking: B:F.451, B:F.451, B:H.455, B:H.455
- Metal complexes: B:H.455
CLA.22: 29 residues within 4Å:- Chain B: T.27, V.30, A.31, W.33, A.34, A.38, V.62, F.65, M.66, R.68, L.69, V.96, H.100, L.103, L.143, A.146, G.147, A.205, G.209
- Ligands: CLA.19, CLA.20, CLA.21, CLA.23, CLA.26, CLA.27, CLA.29, CLA.32, BCR.36, LFA.38
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:T.27, B:V.30, B:A.31, B:W.33, B:A.34, B:L.69, B:V.96, B:L.103, B:A.146
- Hydrogen bonds: B:M.66
- Salt bridges: B:R.68
- Metal complexes: B:H.100
CLA.23: 23 residues within 4Å:- Chain B: L.69, G.70, V.71, F.90, W.91, V.96, A.99, H.100, L.103, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.20, CLA.21, CLA.22, BCR.36, LFA.38, LFA.42
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:L.69, B:L.69, B:V.71, B:F.90, B:F.90, B:F.90, B:W.91, B:W.91, B:W.91, B:L.103, B:L.149, B:F.156, B:F.162, B:F.162
- pi-Cation interactions: B:H.157
- Metal complexes: B:H.157
CLA.24: 29 residues within 4Å:- Chain B: W.33, M.37, Y.40, Q.58, G.59, F.61, L.324, T.327, G.328, P.329, P.447, W.450, F.451, A.454, H.455
- Chain D: F.196, T.277, M.281
- Chain K: F.31, F.35
- Chain L: F.14
- Ligands: CLA.21, CLA.30, BCR.34, BCR.35, LMG.37, BCR.46, PL9.78, LHG.79
13 PLIP interactions:1 interactions with chain L, 2 interactions with chain K, 8 interactions with chain B, 1 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: L:F.14, K:F.31, K:F.35, B:F.61, B:F.61, B:T.327, B:P.447, B:W.450, B:W.450, D:T.277
- Hydrogen bonds: B:G.328
- pi-Stacking: B:F.61
- Metal complexes: H2O.8
CLA.25: 28 residues within 4Å:- Chain B: L.229, T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, G.470, T.473, L.474
- Chain D: L.89, F.120, I.123, M.126, L.127, F.130, I.150
- Chain G: L.43
- Ligands: CLA.20, CLA.26, CLA.27, LFA.71, PLM.72, CLA.76, DGD.88
24 PLIP interactions:11 interactions with chain D, 12 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: D:L.89, D:L.89, D:F.120, D:F.120, D:I.123, D:I.123, D:M.126, D:L.127, D:L.127, D:F.130, D:I.150, B:A.243, B:F.246, B:F.247, B:F.463, B:F.463, B:I.467, B:L.474, G:L.43
- Hydrogen bonds: B:S.239
- Salt bridges: B:H.466
- pi-Stacking: B:H.466, B:H.466
- Metal complexes: B:H.466
CLA.26: 24 residues within 4Å:- Chain B: F.139, L.143, V.208, A.212, F.215, H.216, P.221, P.222, L.225, L.229, M.231
- Chain G: T.27, T.28, M.31, F.34, M.35, L.39, L.42
- Ligands: CLA.19, CLA.22, CLA.25, CLA.27, PLM.72, RRX.87
13 PLIP interactions:4 interactions with chain G, 9 interactions with chain B,- Hydrophobic interactions: G:M.31, G:F.34, G:L.39, G:L.42, B:F.139, B:F.139, B:L.143, B:V.208, B:A.212, B:F.215, B:F.215, B:L.225, B:L.229
CLA.27: 23 residues within 4Å:- Chain B: L.19, H.23, L.135, M.138, F.139, H.142, L.143, A.146, L.229, M.231, I.234, T.236, V.237, S.240, S.241, A.244
- Ligands: CLA.20, CLA.22, CLA.25, CLA.26, CLA.29, CLA.32, RRX.87
12 PLIP interactions:11 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:L.19, B:L.135, B:M.138, B:F.139, B:F.139, B:A.146, B:L.229, B:M.231, B:I.234, B:T.236, B:V.237
- Metal complexes: H2O.4
CLA.28: 23 residues within 4Å:- Chain B: W.5, Y.6, R.7, V.8, H.9, T.10, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472
- Chain L: F.21
- Ligands: CLA.21, CLA.29, CLA.30, CLA.31, LHG.79, LHG.99
17 PLIP interactions:16 interactions with chain B, 1 interactions with chain L,- Hydrophobic interactions: B:W.5, B:T.10, B:L.238, B:L.238, B:I.242, B:F.458, B:F.462, B:F.462, B:F.464, L:F.21
- Hydrogen bonds: B:H.9
- Salt bridges: B:H.9, B:R.472
- pi-Stacking: B:W.468, B:H.469, B:H.469
- Metal complexes: B:H.469
CLA.29: 19 residues within 4Å:- Chain B: H.9, L.12, L.19, H.23, H.26, T.27, I.234, V.237, L.238, S.241, I.242, V.245
- Ligands: CLA.21, CLA.22, CLA.27, CLA.28, CLA.30, CLA.31, CLA.32
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:L.12, B:L.19, B:H.23, B:H.26, B:T.27, B:I.234, B:I.234, B:V.237, B:L.238, B:L.238, B:V.245
- Hydrogen bonds: B:S.241
- Salt bridges: B:H.23
- pi-Stacking: B:H.23
- Metal complexes: B:H.23
CLA.30: 16 residues within 4Å:- Chain B: H.9, H.26, V.30, W.33, L.461, F.462
- Chain L: F.14
- Ligands: CLA.21, CLA.24, CLA.28, CLA.29, CLA.31, BCR.34, BCR.35, LMG.37, LHG.79
13 PLIP interactions:1 interactions with chain L, 12 interactions with chain B,- Hydrophobic interactions: L:F.14, B:V.30, B:V.30, B:W.33, B:W.33, B:L.461, B:F.462, B:F.462, B:F.462
- Salt bridges: B:H.9, B:H.9
- pi-Stacking: B:H.26
- Metal complexes: B:H.26
CLA.31: 23 residues within 4Å:- Chain 2: F.8
- Chain B: V.8, H.9, V.11, L.12, A.22, M.25, L.29, W.115
- Chain K: R.7, Q.8, V.10
- Chain L: F.21, L.25
- Ligands: CLA.28, CLA.29, CLA.30, BCR.34, LMG.37, LHG.99, SQD.204, LMT.206, LFA.207
11 PLIP interactions:7 interactions with chain B, 2 interactions with chain L, 1 interactions with chain K, 1 interactions with chain 2,- Hydrophobic interactions: B:V.8, B:L.12, B:M.25, B:L.29, B:W.115, L:F.21, L:L.25, 2:F.8
- pi-Stacking: B:H.9
- Metal complexes: B:H.9
- Salt bridges: K:R.7
CLA.32: 19 residues within 4Å:- Chain B: I.20, H.23, L.24, T.27, L.133, M.138, I.141, H.142, L.145
- Chain G: L.7, L.14, N.15
- Ligands: CLA.21, CLA.22, CLA.27, CLA.29, CLA.33, BCR.36, LFA.41
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.133, B:I.141, B:L.145, G:L.14
- Metal complexes: B:H.142
CLA.33: 15 residues within 4Å:- Chain B: I.20, L.24, A.110, W.113, H.114, L.120, L.122, F.123
- Chain G: T.5, W.6, L.7, G.8, L.11
- Ligands: CLA.32, BCR.36
12 PLIP interactions:10 interactions with chain B, 2 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.24, B:W.113, B:W.113, B:L.120, B:L.122, B:F.123, G:L.11
- pi-Stacking: B:W.113, B:H.114
- Metal complexes: B:H.114
- Water bridges: G:W.6
CLA.49: 22 residues within 4Å:- Chain C: T.82, L.83, L.156, G.159, A.160, L.163, I.212, V.221, H.225, I.228, A.266, M.269, M.270, I.273, F.277, V.284, Y.285
- Ligands: CLA.50, CLA.51, CLA.54, CLA.55, BCR.62
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:A.160, C:L.163, C:L.163, C:I.212, C:I.228, C:I.228, C:A.266, C:I.273, C:F.277, C:V.284
- pi-Stacking: C:H.225
- Metal complexes: C:H.225
CLA.50: 23 residues within 4Å:- Chain C: W.51, I.75, L.76, H.79, L.83, W.85, L.162, K.166, F.170, L.267, M.270, A.274, V.278, Y.285, L.414, H.418, L.421, F.425
- Ligands: CLA.49, CLA.51, CLA.52, CLA.58, CLA.60
19 PLIP interactions:19 interactions with chain C,- Hydrophobic interactions: C:W.51, C:W.51, C:I.75, C:L.76, C:L.83, C:W.85, C:L.162, C:K.166, C:F.170, C:L.267, C:M.270, C:A.274, C:L.414, C:L.421, C:F.425
- Hydrogen bonds: C:Y.285
- Salt bridges: C:H.79, C:H.418
- Metal complexes: C:H.418
CLA.51: 20 residues within 4Å:- Chain C: I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106
- Ligands: CLA.49, CLA.50, CLA.55, CLA.57, CLA.58, CLA.60, CLA.61, LMG.64
9 PLIP interactions:9 interactions with chain C,- Hydrophobic interactions: C:I.48, C:V.49, C:A.52, C:L.83, C:W.85, C:V.102
- Salt bridges: C:H.79
- pi-Stacking: C:H.106
- Metal complexes: C:H.106
CLA.52: 19 residues within 4Å:- Chain A: F.285
- Chain C: W.51, M.55, F.58, Q.72, G.73, I.75, W.413, L.414, S.417, H.418, F.424
- Chain J: P.26, V.30
- Ligands: LHG.17, CLA.50, CLA.56, CLA.58, DGD.95
13 PLIP interactions:10 interactions with chain C, 1 interactions with chain J, 1 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: C:F.58, C:I.75, C:I.75, C:W.413, C:W.413, C:W.413, C:W.413, C:F.424, C:F.424, C:F.424, J:V.30, A:F.285
- Metal complexes: H2O.11
CLA.53: 23 residues within 4Å:- Chain A: F.33, L.121, S.124, C.125, M.127, G.128, W.131
- Chain C: F.252, S.261, Y.262, G.265, M.269, H.429, L.430, A.433, R.437
- Chain H: V.16, F.23
- Ligands: CLA.7, LMG.47, CLA.55, BCR.62, DGD.63
13 PLIP interactions:8 interactions with chain C, 4 interactions with chain A, 1 interactions with chain H,- Hydrophobic interactions: C:Y.262, C:L.430, A:F.33, A:W.131, A:W.131, A:W.131, H:F.23
- Hydrogen bonds: C:R.437
- Water bridges: C:I.253, C:I.253
- Salt bridges: C:R.437
- pi-Stacking: C:H.429
- Metal complexes: C:H.429
CLA.54: 22 residues within 4Å:- Chain C: L.149, L.153, L.201, W.211, I.231, C.232, G.235, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252
- Ligands: CLA.7, LMG.47, CLA.49, CLA.55, BCR.62, DGD.63
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:L.153, C:L.153, C:L.201, C:W.211, C:W.238, C:W.247, C:W.247, C:A.248, C:F.252
- Hydrogen bonds: C:F.245
- pi-Stacking: C:H.239
- Metal complexes: C:H.239
CLA.55: 23 residues within 4Å:- Chain C: M.145, T.146, L.149, H.152, L.153, L.156, I.228, C.232, W.247, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.49, CLA.51, CLA.53, CLA.54, CLA.57, BCR.62
16 PLIP interactions:15 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:M.145, C:T.146, C:L.149, C:L.149, C:L.156, C:I.228, C:W.247, C:F.252, C:W.254, C:Y.259, C:Y.259, C:Y.262, C:Y.262, C:A.266, C:L.267
- Metal complexes: H2O.9
CLA.56: 23 residues within 4Å:- Chain C: F.21, W.24, A.25, G.26, N.27, A.28, E.257, L.260, L.264, F.424, F.425, G.428, W.431, H.432, R.435
- Chain J: V.30, L.33
- Ligands: SQD.9, LHG.17, CLA.52, CLA.57, CLA.58, CLA.59
14 PLIP interactions:13 interactions with chain C, 1 interactions with chain J,- Hydrophobic interactions: C:N.27, C:A.28, C:L.260, C:L.264, C:F.425, C:F.425, C:W.431, J:V.30
- Hydrogen bonds: C:N.27
- Salt bridges: C:H.432, C:R.435
- pi-Stacking: C:W.431, C:H.432
- Metal complexes: C:H.432
CLA.57: 24 residues within 4Å:- Chain C: N.27, L.30, I.31, L.37, A.40, H.41, H.44, Y.137, W.139, I.148, H.152, L.156, G.256, E.257, Y.259, L.260, S.263, L.267
- Ligands: CLA.51, CLA.55, CLA.56, CLA.58, CLA.59, CLA.60
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:N.27, C:L.30, C:L.37, C:A.40, C:H.44, C:W.139, C:W.139, C:I.148, C:L.156, C:Y.259, C:L.260
- Hydrogen bonds: C:S.263
- Metal complexes: C:H.41
CLA.58: 17 residues within 4Å:- Chain C: N.27, H.44, L.47, I.48, W.51, L.267, F.424, F.425
- Chain J: P.29, V.30, L.33
- Ligands: CLA.50, CLA.51, CLA.52, CLA.56, CLA.57, CLA.59
13 PLIP interactions:3 interactions with chain J, 10 interactions with chain C,- Hydrophobic interactions: J:P.29, J:V.30, J:L.33, C:L.47, C:I.48, C:W.51, C:L.267, C:F.424, C:F.425, C:F.425
- Hydrogen bonds: C:N.27
- pi-Stacking: C:H.44
- Metal complexes: C:H.44
CLA.59: 36 residues within 4Å:- Chain C: N.13, R.14, W.23, G.26, N.27, R.29, L.30, L.33, K.36, A.40, H.44, L.47, A.111, G.114, F.115, V.118, A.121, I.122
- Chain J: F.32, L.33, A.36, W.39, Q.40
- Chain O: I.35, I.36, L.39, L.46
- Chain P: V.20, P.24, A.28
- Ligands: CLA.56, CLA.57, CLA.58, BCR.67, BCR.105, LFA.106
23 PLIP interactions:7 interactions with chain J, 10 interactions with chain C, 2 interactions with chain P, 4 interactions with chain O,- Hydrophobic interactions: J:F.32, J:F.32, J:L.33, J:A.36, C:W.23, C:L.30, C:L.30, C:L.47, C:F.115, C:V.118, C:A.121, C:I.122, P:V.20, P:A.28, O:I.35, O:I.36, O:L.39, O:L.46
- pi-Stacking: J:W.39, J:W.39, J:W.39
- Hydrogen bonds: C:R.29
- Salt bridges: C:R.14
CLA.60: 19 residues within 4Å:- Chain C: H.41, A.45, L.113, F.134, F.135, Y.137, I.148, F.151, H.152, I.154, V.155, I.158, G.159, L.162
- Ligands: CLA.50, CLA.51, CLA.57, CLA.61, BCR.97
16 PLIP interactions:16 interactions with chain C,- Hydrophobic interactions: C:H.41, C:F.134, C:F.135, C:Y.137, C:Y.137, C:I.148, C:I.148, C:F.151, C:I.154, C:V.155, C:I.158, C:I.158, C:L.162
- pi-Stacking: C:H.152
- pi-Cation interactions: C:H.152
- Metal complexes: C:H.152
CLA.61: 17 residues within 4Å:- Chain C: L.38, V.42, V.112, L.113, G.116, Y.119, H.120, P.125, L.128, Y.131, F.135
- Ligands: CLA.51, CLA.60, LMG.64, LFA.65, PLM.66, BCR.97
15 PLIP interactions:15 interactions with chain C,- Hydrophobic interactions: C:L.38, C:L.38, C:V.42, C:V.42, C:V.112, C:L.113, C:Y.119, C:L.128, C:Y.131, C:F.135, C:F.135
- Salt bridges: C:H.120
- pi-Stacking: C:H.120, C:F.135
- Metal complexes: C:H.120
CLA.75: 28 residues within 4Å:- Chain A: M.183, F.206
- Chain D: L.45, L.122, P.149, V.152, S.155, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, L.279, S.282, A.283, V.286
- Ligands: CLA.3, CLA.4, CLA.5, PL9.10, PHO.68
15 PLIP interactions:14 interactions with chain D, 1 interactions with chain A,- Hydrophobic interactions: D:L.45, D:L.122, D:V.152, D:F.181, D:F.185, D:Q.186, D:T.192, D:V.201, D:V.204, D:L.205, D:L.279, A:F.206
- pi-Stacking: D:W.191, D:H.197
- Metal complexes: D:H.197
CLA.76: 24 residues within 4Å:- Chain D: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, T.112, F.113, L.116, H.117, F.120
- Chain G: L.43
- Chain N: F.11, G.13, G.17, A.18
- Ligands: PL9.10, CLA.25, LFA.104
14 PLIP interactions:12 interactions with chain D, 1 interactions with chain N, 1 interactions with chain G,- Hydrophobic interactions: D:L.36, D:P.39, D:L.43, D:W.93, D:W.93, D:W.93, D:L.116, D:F.120, N:F.11, G:L.43
- Hydrogen bonds: D:L.92
- Salt bridges: D:H.117
- pi-Stacking: D:F.113
- Metal complexes: D:H.117
CLA.110: 29 residues within 4Å:- Chain 2: F.17
- Chain Q: F.119, Y.147, P.150, S.153, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, I.290
- Chain T: L.182, L.205, F.257
- Ligands: CLA.111, CLA.112, PHO.113, CLA.178, LHG.183
17 PLIP interactions:12 interactions with chain Q, 4 interactions with chain T, 1 interactions with chain 2,- Hydrophobic interactions: Q:F.119, Q:F.186, Q:Q.187, Q:I.192, Q:I.192, Q:L.193, Q:V.205, Q:F.206, Q:F.206, T:L.182, T:L.182, T:L.205, T:F.257, 2:F.17
- Hydrogen bonds: Q:S.153
- Water bridges: Q:I.290
- Metal complexes: Q:H.198
CLA.111: 22 residues within 4Å:- Chain 2: F.10
- Chain Q: T.45, F.48, F.119, V.157, M.172, I.176, T.179, F.180, F.182, M.183
- Chain T: M.198, V.201, A.202, L.205, G.206
- Ligands: CLA.110, PHO.113, CLA.178, PL9.181, LHG.183, LHG.203
9 PLIP interactions:6 interactions with chain Q, 1 interactions with chain T, 1 interactions with chain 2, 1 Ligand-Water interactions,- Hydrophobic interactions: Q:T.45, Q:F.48, Q:F.119, Q:V.157, Q:F.180, Q:F.182, T:V.201, 2:F.10
- Metal complexes: H2O.17
CLA.112: 20 residues within 4Å:- Chain Q: Q.199, V.202, A.203, F.206, G.207, L.210, W.278
- Chain T: F.157, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.110, PL9.117, LHG.122, DGD.173, PHO.176, CLA.178, LMG.184
11 PLIP interactions:7 interactions with chain T, 3 interactions with chain Q, 1 Ligand-Water interactions,- Hydrophobic interactions: T:F.157, T:I.178, T:I.178, T:F.179, T:F.181, T:L.182, T:L.182, Q:V.202, Q:W.278
- pi-Stacking: Q:F.206
- Metal complexes: H2O.18
CLA.114: 29 residues within 4Å:- Chain Q: V.35, I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, L.114, F.117, H.118, L.121
- Chain X: V.8, Y.9, V.11, V.12, T.13, F.15, V.16, F.19, V.20
- Ligands: BCR.115, LMG.155, CLA.160, CLA.161, BCR.169, PLM.196, LMT.198
22 PLIP interactions:14 interactions with chain Q, 8 interactions with chain X,- Hydrophobic interactions: Q:P.39, Q:P.39, Q:T.40, Q:F.93, Q:P.95, Q:I.96, Q:W.97, Q:W.97, Q:L.114, Q:L.121, X:Y.9, X:V.11, X:T.13, X:F.15, X:F.15, X:V.16, X:F.19, X:V.20
- Hydrogen bonds: Q:I.96
- Salt bridges: Q:H.118
- pi-Stacking: Q:H.118
- Metal complexes: Q:H.118
CLA.125: 11 residues within 4Å:- Chain R: W.185, G.186, P.187, F.190
- Chain W: F.41, I.44, I.48, L.55
- Ligands: CLA.126, PLM.152, RRX.210
9 PLIP interactions:4 interactions with chain R, 4 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: R:W.185, R:P.187, R:F.190, R:F.190, W:F.41, W:F.41, W:I.48, W:L.55
- Metal complexes: H2O.19
CLA.126: 29 residues within 4Å:- Chain R: W.185, G.189, F.190, P.192, G.197, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250, V.251, T.255
- Chain T: V.154, L.158, I.159, L.162
- Chain W: F.38, F.41, I.45, L.46, Y.49
- Ligands: CLA.125, CLA.127, CLA.129, DGD.193, RRX.210
26 PLIP interactions:16 interactions with chain R, 4 interactions with chain T, 6 interactions with chain W,- Hydrophobic interactions: R:W.185, R:F.190, R:F.190, R:P.192, R:A.200, R:H.201, R:A.205, R:V.208, R:V.208, R:F.246, R:F.247, R:F.247, R:F.250, R:F.250, T:V.154, T:L.158, T:I.159, T:L.162, W:F.38, W:F.41, W:I.45, W:I.45, W:I.45, W:L.46
- pi-Stacking: R:H.201
- Metal complexes: R:H.201
CLA.127: 28 residues within 4Å:- Chain R: R.68, L.69, A.146, L.149, C.150, F.153, L.158, M.166, V.198, H.201, H.202, A.244, F.247, A.248, V.251, V.252, T.262
- Chain W: M.35, F.38, L.39, L.42
- Ligands: CLA.126, CLA.128, CLA.129, CLA.130, CLA.132, CLA.134, RRX.210
18 PLIP interactions:16 interactions with chain R, 2 interactions with chain W,- Hydrophobic interactions: R:L.69, R:L.149, R:F.153, R:F.153, R:V.198, R:A.244, R:F.247, R:F.247, R:A.248, R:V.251, W:L.39, W:L.42
- Hydrogen bonds: R:R.68
- Water bridges: R:T.262
- Salt bridges: R:R.68
- pi-Stacking: R:H.202
- pi-Cation interactions: R:H.201
- Metal complexes: R:H.202
CLA.128: 26 residues within 4Å:- Chain R: W.33, F.61, F.65, R.68, L.145, L.148, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.127, CLA.129, CLA.130, CLA.131, CLA.135, CLA.136, CLA.137, CLA.139, BCR.142, PLM.150
20 PLIP interactions:20 interactions with chain R,- Hydrophobic interactions: R:W.33, R:F.61, R:F.65, R:L.148, R:V.245, R:A.248, R:A.249, R:V.252, R:F.458, R:F.458, R:F.458, R:F.458, R:F.462, R:F.462
- Salt bridges: R:R.68
- pi-Stacking: R:F.451, R:F.451, R:H.455, R:H.455
- Metal complexes: R:H.455
CLA.129: 29 residues within 4Å:- Chain R: T.27, V.30, A.31, W.33, A.34, A.38, V.62, F.65, M.66, R.68, L.69, V.96, H.100, L.103, L.143, A.146, G.147, A.205, G.209
- Ligands: CLA.126, CLA.127, CLA.128, CLA.130, CLA.133, CLA.134, CLA.136, CLA.139, BCR.143, LFA.146
12 PLIP interactions:12 interactions with chain R,- Hydrophobic interactions: R:T.27, R:V.30, R:A.31, R:W.33, R:A.34, R:L.69, R:V.96, R:L.103, R:A.146
- Hydrogen bonds: R:M.66
- Salt bridges: R:R.68
- Metal complexes: R:H.100
CLA.130: 23 residues within 4Å:- Chain R: L.69, G.70, V.71, F.90, W.91, V.96, A.99, H.100, L.103, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.127, CLA.128, CLA.129, BCR.143, LFA.146, PLM.150
16 PLIP interactions:16 interactions with chain R,- Hydrophobic interactions: R:L.69, R:L.69, R:V.71, R:F.90, R:F.90, R:F.90, R:W.91, R:W.91, R:W.91, R:L.103, R:L.149, R:F.156, R:F.162, R:F.162
- pi-Cation interactions: R:H.157
- Metal complexes: R:H.157
CLA.131: 29 residues within 4Å:- Chain 0: F.31, F.35
- Chain 1: F.14
- Chain R: W.33, M.37, Y.40, Q.58, G.59, F.61, L.324, T.327, G.328, P.329, P.447, W.450, F.451, A.454, H.455
- Chain T: F.196, T.277, M.281
- Ligands: BCR.123, CLA.128, CLA.137, BCR.141, BCR.142, LMG.144, PL9.181, LHG.182
14 PLIP interactions:2 interactions with chain 0, 9 interactions with chain R, 1 interactions with chain T, 1 interactions with chain 1, 1 Ligand-Water interactions,- Hydrophobic interactions: 0:F.31, 0:F.35, R:Y.40, R:F.61, R:F.61, R:T.327, R:P.447, R:W.450, R:W.450, T:T.277, 1:F.14
- Hydrogen bonds: R:G.328
- pi-Stacking: R:F.61
- Metal complexes: H2O.24
CLA.132: 30 residues within 4Å:- Chain R: L.229, T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, G.470, T.473, L.474
- Chain T: L.89, F.120, I.123, M.126, L.127, F.130, I.150
- Chain W: L.39, L.43, L.46
- Ligands: CLA.127, CLA.133, CLA.134, PLM.145, CLA.179, LFA.185, DGD.193
25 PLIP interactions:12 interactions with chain R, 11 interactions with chain T, 2 interactions with chain W,- Hydrophobic interactions: R:A.243, R:F.246, R:F.247, R:F.463, R:F.463, R:I.467, R:L.474, T:L.89, T:L.89, T:F.120, T:F.120, T:F.120, T:I.123, T:I.123, T:M.126, T:L.127, T:F.130, T:I.150, W:L.39, W:L.46
- Hydrogen bonds: R:S.239
- Salt bridges: R:H.466
- pi-Stacking: R:H.466, R:H.466
- Metal complexes: R:H.466
CLA.133: 24 residues within 4Å:- Chain R: F.139, L.143, V.208, A.212, F.215, H.216, P.221, P.222, L.225, L.229, M.231
- Chain W: T.27, T.28, M.31, F.34, M.35, L.39, L.42
- Ligands: CLA.129, CLA.132, CLA.134, PLM.145, LFA.149, RRX.210
13 PLIP interactions:9 interactions with chain R, 4 interactions with chain W,- Hydrophobic interactions: R:F.139, R:F.139, R:L.143, R:V.208, R:A.212, R:F.215, R:F.215, R:L.225, R:L.229, W:M.31, W:F.34, W:L.39, W:L.42
CLA.134: 22 residues within 4Å:- Chain R: H.23, L.135, M.138, F.139, H.142, L.143, A.146, L.229, M.231, I.234, T.236, V.237, S.240, S.241, A.244
- Ligands: CLA.127, CLA.129, CLA.132, CLA.133, CLA.136, CLA.139, RRX.210
11 PLIP interactions:10 interactions with chain R, 1 Ligand-Water interactions,- Hydrophobic interactions: R:L.135, R:M.138, R:F.139, R:F.139, R:A.146, R:L.229, R:M.231, R:I.234, R:T.236, R:V.237
- Metal complexes: H2O.20
CLA.135: 23 residues within 4Å:- Chain 1: F.21
- Chain R: W.5, Y.6, R.7, V.8, H.9, T.10, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472
- Ligands: CLA.128, CLA.136, CLA.137, CLA.138, LHG.182, LHG.203
17 PLIP interactions:16 interactions with chain R, 1 interactions with chain 1,- Hydrophobic interactions: R:W.5, R:W.5, R:T.10, R:L.238, R:L.238, R:F.458, R:F.462, R:F.462, R:F.464, 1:F.21
- Hydrogen bonds: R:H.9
- Salt bridges: R:H.9, R:R.472
- pi-Stacking: R:W.468, R:H.469, R:H.469
- Metal complexes: R:H.469
CLA.136: 19 residues within 4Å:- Chain R: H.9, L.12, L.19, H.23, H.26, T.27, I.234, V.237, L.238, S.241, I.242, V.245
- Ligands: CLA.128, CLA.129, CLA.134, CLA.135, CLA.137, CLA.138, CLA.139
15 PLIP interactions:15 interactions with chain R,- Hydrophobic interactions: R:L.12, R:L.19, R:H.23, R:H.26, R:T.27, R:I.234, R:I.234, R:V.237, R:L.238, R:L.238, R:V.245
- Hydrogen bonds: R:S.241
- Salt bridges: R:H.23
- pi-Stacking: R:H.23
- Metal complexes: R:H.23
CLA.137: 16 residues within 4Å:- Chain 1: F.14
- Chain R: H.9, H.26, V.30, W.33, L.461, F.462
- Ligands: CLA.128, CLA.131, CLA.135, CLA.136, CLA.138, BCR.141, BCR.142, LMG.144, LHG.182
13 PLIP interactions:12 interactions with chain R, 1 interactions with chain 1,- Hydrophobic interactions: R:V.30, R:V.30, R:W.33, R:W.33, R:L.461, R:F.462, R:F.462, R:F.462, 1:F.14
- Salt bridges: R:H.9, R:H.9
- pi-Stacking: R:H.26
- Metal complexes: R:H.26
CLA.138: 23 residues within 4Å:- Chain 0: R.7, Q.8, V.10
- Chain 1: F.21, L.25
- Chain M: F.8
- Chain R: V.8, H.9, V.11, L.12, A.22, M.25, L.29, W.115
- Ligands: SQD.100, LMT.102, LFA.103, CLA.135, CLA.136, CLA.137, BCR.141, LMG.144, LHG.203
10 PLIP interactions:1 interactions with chain 0, 7 interactions with chain R, 2 interactions with chain 1,- Salt bridges: 0:R.7
- Hydrophobic interactions: R:V.8, R:L.12, R:M.25, R:L.29, R:W.115, 1:F.21, 1:L.25
- pi-Stacking: R:H.9
- Metal complexes: R:H.9
CLA.139: 19 residues within 4Å:- Chain R: I.20, H.23, L.24, T.27, L.133, M.138, I.141, H.142, L.145
- Chain W: L.7, L.14, N.15
- Ligands: CLA.128, CLA.129, CLA.134, CLA.136, CLA.140, BCR.143, LFA.151
7 PLIP interactions:5 interactions with chain R, 2 interactions with chain W,- Hydrophobic interactions: R:I.20, R:L.133, R:I.141, R:L.145, W:L.14, W:L.14
- Metal complexes: R:H.142
CLA.140: 15 residues within 4Å:- Chain R: I.20, L.24, A.110, W.113, H.114, L.120, L.122, F.123
- Chain W: T.5, W.6, L.7, G.8, L.11
- Ligands: CLA.139, BCR.143
12 PLIP interactions:10 interactions with chain R, 2 interactions with chain W,- Hydrophobic interactions: R:I.20, R:L.24, R:W.113, R:W.113, R:L.120, R:L.122, R:F.123, W:L.11
- pi-Stacking: R:W.113, R:H.114
- Metal complexes: R:H.114
- Water bridges: W:W.6
CLA.156: 22 residues within 4Å:- Chain S: T.82, L.83, L.156, G.159, A.160, L.163, I.212, V.221, H.225, I.228, A.266, M.269, M.270, I.273, F.277, V.284, Y.285
- Ligands: CLA.157, CLA.158, CLA.161, CLA.162, BCR.169
14 PLIP interactions:14 interactions with chain S,- Hydrophobic interactions: S:A.160, S:L.163, S:L.163, S:I.212, S:I.228, S:I.228, S:A.266, S:M.270, S:I.273, S:I.273, S:F.277, S:V.284
- pi-Stacking: S:H.225
- Metal complexes: S:H.225
CLA.157: 23 residues within 4Å:- Chain S: W.51, I.75, L.76, H.79, L.83, W.85, L.162, K.166, F.170, L.267, M.270, A.274, V.278, Y.285, L.414, H.418, L.421, F.425
- Ligands: CLA.156, CLA.158, CLA.159, CLA.165, CLA.167
19 PLIP interactions:19 interactions with chain S,- Hydrophobic interactions: S:W.51, S:W.51, S:I.75, S:L.76, S:L.83, S:W.85, S:L.162, S:K.166, S:F.170, S:L.267, S:M.270, S:A.274, S:L.414, S:L.421, S:F.425
- Hydrogen bonds: S:Y.285
- Salt bridges: S:H.79, S:H.418
- Metal complexes: S:H.418
CLA.158: 20 residues within 4Å:- Chain S: I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106
- Ligands: CLA.156, CLA.157, CLA.162, CLA.164, CLA.165, CLA.167, CLA.168, LMG.172
9 PLIP interactions:9 interactions with chain S,- Hydrophobic interactions: S:I.48, S:V.49, S:A.52, S:L.83, S:W.85, S:V.102
- Salt bridges: S:H.79
- pi-Stacking: S:H.106
- Metal complexes: S:H.106
CLA.159: 20 residues within 4Å:- Chain Q: F.285
- Chain S: W.51, M.55, F.58, Q.72, G.73, I.75, W.413, L.414, S.417, H.418, F.424
- Chain Z: P.26, V.30
- Ligands: LHG.121, CLA.157, CLA.163, CLA.165, DGD.171, DGD.173
14 PLIP interactions:10 interactions with chain S, 2 interactions with chain Z, 1 interactions with chain Q, 1 Ligand-Water interactions,- Hydrophobic interactions: S:F.58, S:I.75, S:I.75, S:W.413, S:W.413, S:W.413, S:W.413, S:F.424, S:F.424, S:F.424, Z:P.26, Z:V.30, Q:F.285
- Metal complexes: H2O.26
CLA.160: 23 residues within 4Å:- Chain Q: F.33, L.121, S.124, C.125, M.127, G.128, W.131
- Chain S: F.252, S.261, Y.262, G.265, M.269, H.429, L.430, A.433, R.437
- Chain X: V.16, F.23
- Ligands: CLA.114, LMG.155, CLA.162, BCR.169, DGD.170
13 PLIP interactions:8 interactions with chain S, 1 interactions with chain X, 4 interactions with chain Q,- Hydrophobic interactions: S:Y.262, S:L.430, X:F.23, Q:F.33, Q:W.131, Q:W.131, Q:W.131
- Hydrogen bonds: S:R.437
- Water bridges: S:I.253, S:I.253
- Salt bridges: S:R.437
- pi-Stacking: S:H.429
- Metal complexes: S:H.429
CLA.161: 23 residues within 4Å:- Chain S: L.149, L.153, L.201, W.211, I.231, C.232, G.235, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252
- Ligands: CLA.114, LMG.155, CLA.156, CLA.162, BCR.169, DGD.170, LMT.198
9 PLIP interactions:9 interactions with chain S,- Hydrophobic interactions: S:L.153, S:L.153, S:L.201, S:W.211, S:W.247, S:F.252
- Hydrogen bonds: S:F.245
- pi-Stacking: S:H.239
- Metal complexes: S:H.239
CLA.162: 22 residues within 4Å:- Chain S: M.145, T.146, L.149, H.152, L.153, L.156, I.228, C.232, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.156, CLA.158, CLA.160, CLA.161, CLA.164, BCR.169
16 PLIP interactions:15 interactions with chain S, 1 Ligand-Water interactions,- Hydrophobic interactions: S:M.145, S:T.146, S:L.149, S:L.149, S:L.156, S:I.228, S:F.252, S:F.252, S:W.254, S:Y.259, S:Y.259, S:Y.262, S:Y.262, S:A.266, S:L.267
- Metal complexes: H2O.24
CLA.163: 23 residues within 4Å:- Chain S: F.21, W.24, A.25, G.26, N.27, A.28, L.260, L.264, F.424, F.425, G.428, W.431, H.432, R.435
- Chain Z: V.30, L.33
- Ligands: SQD.116, LHG.121, CLA.159, CLA.164, CLA.165, CLA.166, DGD.173
13 PLIP interactions:12 interactions with chain S, 1 interactions with chain Z,- Hydrophobic interactions: S:N.27, S:A.28, S:L.260, S:F.425, S:F.425, S:W.431, Z:V.30
- Hydrogen bonds: S:N.27
- Salt bridges: S:H.432, S:R.435
- pi-Stacking: S:W.431, S:H.432
- Metal complexes: S:H.432
CLA.164: 26 residues within 4Å:- Chain S: N.27, L.30, I.31, L.37, A.40, H.41, H.44, Y.137, W.139, M.145, I.148, H.152, L.156, G.256, E.257, Y.259, L.260, S.263, L.264, L.267
- Ligands: CLA.158, CLA.162, CLA.163, CLA.165, CLA.166, CLA.167
15 PLIP interactions:15 interactions with chain S,- Hydrophobic interactions: S:N.27, S:L.30, S:L.37, S:A.40, S:H.44, S:Y.137, S:W.139, S:W.139, S:I.148, S:I.148, S:L.156, S:Y.259, S:L.260
- Hydrogen bonds: S:S.263
- Metal complexes: S:H.41
CLA.165: 17 residues within 4Å:- Chain S: N.27, H.44, L.47, I.48, W.51, L.267, F.424, F.425
- Chain Z: P.29, V.30, L.33
- Ligands: CLA.157, CLA.158, CLA.159, CLA.163, CLA.164, CLA.166
13 PLIP interactions:10 interactions with chain S, 3 interactions with chain Z,- Hydrophobic interactions: S:L.47, S:I.48, S:W.51, S:L.267, S:F.424, S:F.425, S:F.425, Z:P.29, Z:V.30, Z:L.33
- Hydrogen bonds: S:N.27
- pi-Stacking: S:H.44
- Metal complexes: S:H.44
CLA.166: 35 residues within 4Å:- Chain 4: I.36, L.39, N.45, L.46
- Chain 5: V.20, P.24, A.28
- Chain S: T.12, N.13, R.14, W.23, G.26, N.27, R.29, L.30, L.33, K.36, A.40, H.44, L.47, A.111, G.114, F.115, A.121, I.122
- Chain Z: F.32, L.33, A.36, W.39, Q.40
- Ligands: CLA.163, CLA.164, CLA.165, BCR.174, LMT.212
23 PLIP interactions:10 interactions with chain S, 3 interactions with chain 5, 7 interactions with chain Z, 3 interactions with chain 4,- Hydrophobic interactions: S:W.23, S:L.30, S:L.30, S:L.47, S:F.115, S:A.121, S:I.122, S:I.122, 5:V.20, 5:P.24, 5:A.28, Z:F.32, Z:F.32, Z:L.33, Z:A.36, 4:I.36, 4:L.39, 4:L.46
- Hydrogen bonds: S:R.29
- Salt bridges: S:R.14
- pi-Stacking: Z:W.39, Z:W.39, Z:W.39
CLA.167: 20 residues within 4Å:- Chain S: H.41, A.45, L.113, L.128, F.134, F.135, Y.137, I.148, F.151, H.152, I.154, V.155, I.158, G.159, L.162
- Ligands: CLA.157, CLA.158, CLA.164, CLA.168, BCR.201
16 PLIP interactions:16 interactions with chain S,- Hydrophobic interactions: S:H.41, S:L.128, S:F.135, S:Y.137, S:Y.137, S:I.148, S:I.148, S:F.151, S:I.154, S:V.155, S:I.158, S:I.158, S:L.162
- pi-Stacking: S:H.152
- pi-Cation interactions: S:H.152
- Metal complexes: S:H.152
CLA.168: 16 residues within 4Å:- Chain S: L.38, V.42, V.112, L.113, G.116, Y.119, H.120, P.125, L.128, Y.131, F.135
- Ligands: CLA.158, CLA.167, LMG.172, BCR.201, LMT.212
16 PLIP interactions:16 interactions with chain S,- Hydrophobic interactions: S:L.38, S:L.38, S:V.42, S:V.42, S:V.112, S:L.113, S:Y.119, S:L.128, S:Y.131, S:F.135, S:F.135
- Salt bridges: S:H.120
- pi-Stacking: S:H.120, S:H.120, S:F.135
- Metal complexes: S:H.120
CLA.178: 28 residues within 4Å:- Chain Q: M.183, F.206
- Chain T: L.45, P.149, V.152, F.153, S.155, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, L.279, S.282, A.283, V.286
- Ligands: CLA.110, CLA.111, CLA.112, PHO.176, LMG.184
16 PLIP interactions:15 interactions with chain T, 1 interactions with chain Q,- Hydrophobic interactions: T:L.45, T:V.152, T:F.153, T:F.181, T:F.185, T:Q.186, T:T.192, T:V.201, T:V.204, T:V.204, T:L.205, T:L.279, Q:F.206
- pi-Stacking: T:W.191, T:H.197
- Metal complexes: T:H.197
CLA.179: 26 residues within 4Å:- Chain 3: F.11, G.13, G.17, A.18, V.20
- Chain T: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, T.112, F.113, L.116, H.117, F.120
- Chain W: L.43
- Ligands: PL9.117, CLA.132, DGD.188, LFA.209
15 PLIP interactions:1 interactions with chain W, 12 interactions with chain T, 2 interactions with chain 3,- Hydrophobic interactions: W:L.43, T:L.36, T:P.39, T:L.43, T:W.93, T:W.93, T:W.93, T:L.116, T:F.120, 3:F.11, 3:V.20
- Hydrogen bonds: T:L.92
- Salt bridges: T:H.117
- pi-Stacking: T:F.113
- Metal complexes: T:H.117
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.6: 27 residues within 4Å:- Chain A: L.41, A.44, T.45, F.48, I.115, F.119, Y.126, Q.130, A.146, Y.147, P.150, M.172, G.175, P.279, V.280, V.283
- Chain D: L.205, A.208, L.209, I.213, W.253, F.257
- Ligands: CLA.3, CLA.4, SQD.11, PL9.78, LHG.80
15 PLIP interactions:12 interactions with chain A, 3 interactions with chain D- Hydrophobic interactions: A:L.41, A:A.44, A:F.48, A:I.115, A:F.119, A:Y.126, A:A.146, A:Y.147, A:Y.147, A:P.150, D:L.205, D:A.208, D:I.213
- Hydrogen bonds: A:Y.126, A:Q.130
PHO.68: 31 residues within 4Å:- Chain A: F.206, A.209, L.210, A.213, M.214, L.258, I.259
- Chain D: L.37, A.41, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, P.149, F.153, F.173, G.174, V.175, P.275, V.276, L.279
- Ligands: CLA.5, PL9.10, CLA.75
23 PLIP interactions:19 interactions with chain D, 4 interactions with chain A- Hydrophobic interactions: D:A.41, D:L.45, D:W.48, D:W.48, D:W.48, D:W.48, D:I.114, D:L.122, D:F.125, D:A.145, D:F.146, D:F.146, D:P.149, D:F.153, D:F.173, D:V.175, D:P.275, D:L.279, A:F.206, A:A.209, A:L.210, A:A.213
- Hydrogen bonds: D:N.142
PHO.113: 27 residues within 4Å:- Chain Q: L.41, A.44, T.45, F.48, I.115, F.119, Y.126, Q.130, A.146, Y.147, P.150, M.172, G.175, P.279, V.280, V.283
- Chain T: L.205, A.208, L.209, I.213, W.253, F.257
- Ligands: CLA.110, CLA.111, SQD.118, PL9.181, LHG.183
15 PLIP interactions:12 interactions with chain Q, 3 interactions with chain T- Hydrophobic interactions: Q:L.41, Q:A.44, Q:F.48, Q:I.115, Q:F.119, Q:Y.126, Q:A.146, Q:Y.147, Q:Y.147, Q:P.150, T:L.205, T:A.208, T:I.213
- Hydrogen bonds: Q:Y.126, Q:Q.130
PHO.176: 31 residues within 4Å:- Chain Q: F.206, A.209, L.210, A.213, M.214, L.258, I.259
- Chain T: L.37, A.41, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, P.149, F.153, F.173, G.174, V.175, P.275, V.276, L.279
- Ligands: CLA.112, PL9.117, CLA.178
22 PLIP interactions:19 interactions with chain T, 3 interactions with chain Q- Hydrophobic interactions: T:A.41, T:L.45, T:W.48, T:W.48, T:W.48, T:W.48, T:I.114, T:L.122, T:F.125, T:A.145, T:F.146, T:F.146, T:P.149, T:F.153, T:F.173, T:V.175, T:P.275, T:L.279, Q:F.206, Q:A.209, Q:A.213
- Hydrogen bonds: T:N.142
- 20 x BCR: BETA-CAROTENE(Non-covalent)
BCR.8: 25 residues within 4Å:- Chain A: F.17, V.35, I.38, L.42, A.43, I.46, C.47, I.50, A.51, A.54, A.55, I.96, L.102, W.105, L.106, P.111
- Chain H: F.15
- Ligands: CLA.7, SQD.11, LFA.12, PLM.13, PLM.15, PLM.91, PLM.92, PLM.153
Ligand excluded by PLIPBCR.34: 16 residues within 4Å:- Chain 2: F.19
- Chain B: M.25, L.29, F.108, C.112, W.115
- Chain L: A.10, L.13
- Ligands: CLA.24, CLA.30, CLA.31, BCR.35, LMG.37, BCR.46, LHG.99, SQD.204
Ligand excluded by PLIPBCR.35: 15 residues within 4Å:- Chain B: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105
- Ligands: CLA.21, CLA.24, CLA.30, BCR.34, LMG.37, BCR.46, LMT.208
Ligand excluded by PLIPBCR.36: 15 residues within 4Å:- Chain 2: F.18, F.22, F.23
- Chain B: L.106, L.109, A.110, W.113, V.116, Y.117
- Ligands: CLA.22, CLA.23, CLA.32, CLA.33, LFA.38, SQD.118
Ligand excluded by PLIPBCR.46: 21 residues within 4Å:- Chain 2: I.4, F.8, A.11, I.14, A.15, F.17, F.18, I.21, F.22
- Chain B: W.33, S.36, M.37, Y.40, L.109
- Chain Q: L.28
- Ligands: CLA.24, BCR.34, BCR.35, SQD.118, SQD.204, LMT.208
Ligand excluded by PLIPBCR.62: 19 residues within 4Å:- Chain C: I.197, L.201, I.212, V.215, D.220, V.221, G.224, H.225, I.228, F.252, M.269
- Chain H: V.20, F.23, L.24
- Ligands: CLA.7, CLA.49, CLA.53, CLA.54, CLA.55
Ligand excluded by PLIPBCR.67: 22 residues within 4Å:- Chain C: A.43, G.46, L.47, F.50, V.104, L.107, S.110, A.111, G.114, A.121
- Chain J: Y.15, L.25, F.32, L.35, W.39
- Chain P: L.9, L.12, S.16, W.47
- Ligands: CLA.59, BCR.105, LFA.106
Ligand excluded by PLIPBCR.77: 19 residues within 4Å:- Chain D: Y.42, L.43, G.46, G.47, L.49, T.50, F.101, W.104, L.110, F.113
- Chain F: P.29, T.30, F.33, I.37
- Chain I: V.21, V.25, F.28
- Ligands: LMG.81, DGD.82
Ligand excluded by PLIPBCR.97: 17 residues within 4Å:- Chain C: F.100, V.104, I.108, S.109, V.112, L.113, F.135
- Chain J: Y.15
- Chain P: V.51, V.54, G.55, N.58, F.59
- Ligands: CLA.60, CLA.61, LFA.65, PLM.66
Ligand excluded by PLIPBCR.105: 22 residues within 4Å:- Chain C: F.50
- Chain I: T.15, G.18, M.19
- Chain J: L.21, L.25, I.28, L.31, A.34, L.35, V.38, A.41
- Chain O: I.28, G.29, G.32, P.33
- Chain P: V.13, S.16, F.17
- Ligands: CLA.59, BCR.67, LFA.98
Ligand excluded by PLIPBCR.115: 20 residues within 4Å:- Chain Q: F.17, V.35, I.38, L.42, A.43, I.46, C.47, I.50, A.51, A.54, A.55, I.96, L.102, W.105, L.106, P.111
- Chain X: F.15
- Ligands: PLM.107, CLA.114, PLM.196
Ligand excluded by PLIPBCR.123: 19 residues within 4Å:- Chain A: L.28
- Chain M: F.8, A.11, I.14, F.17, F.18, I.21, F.22
- Chain R: W.33, S.36, M.37, Y.40, L.109
- Ligands: SQD.11, SQD.100, LMT.124, CLA.131, BCR.141, BCR.142
Ligand excluded by PLIPBCR.141: 19 residues within 4Å:- Chain 1: I.9, A.10, L.13
- Chain M: F.19
- Chain R: M.25, L.29, F.108, A.111, C.112, W.115
- Ligands: SQD.100, BCR.123, CLA.131, CLA.137, CLA.138, BCR.142, LMG.144, LHG.203, LMT.205
Ligand excluded by PLIPBCR.142: 16 residues within 4Å:- Chain R: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105, L.109
- Ligands: SQD.11, BCR.123, CLA.128, CLA.131, CLA.137, BCR.141, LMG.144
Ligand excluded by PLIPBCR.143: 15 residues within 4Å:- Chain M: F.18, F.22, F.23
- Chain R: L.106, L.109, A.110, W.113, V.116, Y.117
- Ligands: SQD.11, CLA.129, CLA.130, CLA.139, CLA.140, LFA.146
Ligand excluded by PLIPBCR.169: 19 residues within 4Å:- Chain S: I.197, L.201, I.212, V.215, D.220, V.221, G.224, H.225, I.228, F.252, M.269
- Chain X: V.20, F.23, L.24
- Ligands: CLA.114, CLA.156, CLA.160, CLA.161, CLA.162
Ligand excluded by PLIPBCR.174: 24 residues within 4Å:- Chain 5: L.9, L.12, S.16, V.20, W.47
- Chain S: A.43, G.46, L.47, F.50, V.104, L.107, S.110, A.111, G.114, A.121
- Chain Z: Y.15, L.21, L.25, F.32, L.35, W.39
- Ligands: CLA.166, BCR.211, LMT.212
Ligand excluded by PLIPBCR.180: 20 residues within 4Å:- Chain T: Y.42, L.43, G.46, G.47, L.49, T.50, F.101, W.104, L.110, F.113
- Chain V: P.29, T.30, F.33, I.37
- Chain Y: V.21, V.25, F.28
- Ligands: DGD.171, LMG.184, DGD.188
Ligand excluded by PLIPBCR.201: 16 residues within 4Å:- Chain 5: V.51, V.54, G.55, N.58, F.59
- Chain S: F.100, V.104, I.108, S.109, V.112, L.113, F.135
- Chain Z: Y.15
- Ligands: CLA.167, CLA.168, LMG.172
Ligand excluded by PLIPBCR.211: 23 residues within 4Å:- Chain 4: I.28, G.29, G.32, P.33
- Chain 5: V.13, S.16, F.17
- Chain S: F.50
- Chain Y: A.14, T.15, G.18, M.19
- Chain Z: L.21, L.25, I.28, L.31, A.34, L.35, V.38, A.41
- Ligands: SQD.116, BCR.174, LFA.202
Ligand excluded by PLIP- 8 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.9: 20 residues within 4Å:- Chain A: L.200, A.203, G.204, F.265, N.267, S.270, F.273, A.277, W.278, V.281, G.282
- Chain C: Q.16, A.22, W.23, W.24
- Chain D: F.232, R.233
- Chain J: F.37
- Ligands: LHG.17, CLA.56
19 PLIP interactions:1 interactions with chain D, 11 interactions with chain A, 2 interactions with chain J, 5 interactions with chain C- Salt bridges: D:R.233
- Hydrophobic interactions: A:A.203, A:F.265, A:F.273, A:A.277, A:W.278, A:W.278, A:W.278, A:V.281, J:F.37, J:F.37, C:W.23, C:W.24
- Hydrogen bonds: A:N.267, A:S.270, C:Q.16
- Water bridges: A:N.266, C:W.23, C:W.23
SQD.11: 21 residues within 4Å:- Chain A: W.20, N.26, R.27, L.28, V.30, I.38, T.45, I.46
- Chain M: F.22
- Chain R: L.106, L.109, W.113, Y.117
- Ligands: CLA.4, PHO.6, BCR.8, LHG.80, BCR.123, BCR.142, BCR.143, PLM.153
12 PLIP interactions:10 interactions with chain A, 2 interactions with chain R- Hydrophobic interactions: A:W.20, A:N.26, A:L.28, A:V.30, A:I.38, A:T.45, A:I.46, R:L.109
- Hydrogen bonds: A:N.26, A:R.27, A:L.28
- Water bridges: R:W.113
SQD.85: 12 residues within 4Å:- Chain D: R.26
- Chain F: P.14, F.16, T.17, V.18, V.21
- Chain N: T.24, V.27, L.28, I.31, D.35
- Ligands: PL9.10
7 PLIP interactions:3 interactions with chain F, 1 interactions with chain N, 2 interactions with chain E, 1 interactions with chain D- Hydrophobic interactions: F:V.18, N:L.28
- Hydrogen bonds: F:V.18, E:E.7, E:E.7
- Water bridges: F:R.19
- Salt bridges: D:R.26
SQD.100: 18 residues within 4Å:- Chain 0: R.7
- Chain K: R.14, Y.18, L.21
- Chain L: S.19, Y.26
- Chain M: C.12, L.16, F.19, F.23
- Chain R: R.18, S.104, F.108, W.115
- Ligands: LFA.103, BCR.123, CLA.138, BCR.141
13 PLIP interactions:5 interactions with chain K, 4 interactions with chain R, 3 interactions with chain M, 1 interactions with chain 0- Hydrophobic interactions: K:Y.18, K:L.21, R:F.108, M:L.16, M:F.19, M:F.19
- Hydrogen bonds: K:R.14, K:R.14
- Salt bridges: K:R.14, R:R.18, 0:R.7
- Water bridges: R:R.18, R:R.18
SQD.116: 23 residues within 4Å:- Chain Q: L.200, A.203, G.204, F.265, N.267, S.270, F.273, A.277, W.278, V.281, G.282
- Chain S: Q.16, A.22, W.23, W.24
- Chain T: F.232, R.233
- Chain Y: I.22
- Chain Z: A.34, F.37
- Ligands: LHG.121, CLA.163, BCR.211
20 PLIP interactions:10 interactions with chain Q, 3 interactions with chain Z, 1 interactions with chain Y, 5 interactions with chain S, 1 interactions with chain T- Hydrophobic interactions: Q:A.203, Q:F.265, Q:F.273, Q:A.277, Q:W.278, Q:W.278, Q:W.278, Q:V.281, Z:A.34, Z:F.37, Z:F.37, Y:I.22, S:W.23, S:W.24
- Hydrogen bonds: Q:N.267, Q:S.270, S:Q.16
- Water bridges: S:W.23, S:W.23
- Salt bridges: T:R.233
SQD.118: 15 residues within 4Å:- Chain 2: F.22
- Chain B: L.109, W.113, Y.117
- Chain Q: W.20, N.26, R.27, L.28, V.30, I.38, L.41, L.42
- Ligands: BCR.36, BCR.46, PHO.113
9 PLIP interactions:8 interactions with chain Q, 1 interactions with chain B- Hydrophobic interactions: Q:V.30, Q:I.38, Q:L.41, Q:L.42, Q:L.42, B:L.109
- Hydrogen bonds: Q:R.27, Q:L.28
- Water bridges: Q:D.25
SQD.191: 13 residues within 4Å:- Chain 3: V.20, L.23, T.24, V.27, I.31, D.35
- Chain T: R.26
- Chain V: P.14, F.16, T.17, V.18, V.21
- Ligands: PL9.117
7 PLIP interactions:3 interactions with chain V, 3 interactions with chain 3, 1 interactions with chain T- Hydrophobic interactions: V:F.16, V:V.18, 3:V.20, 3:L.23, 3:V.27
- Hydrogen bonds: V:V.18
- Salt bridges: T:R.26
SQD.204: 17 residues within 4Å:- Chain 0: R.14, Y.18
- Chain 1: Y.26
- Chain 2: C.12, L.16, F.19, F.23
- Chain B: R.18, S.104, F.108, W.115
- Chain K: N.4, R.7
- Ligands: CLA.31, BCR.34, BCR.46, LFA.207
11 PLIP interactions:4 interactions with chain B, 4 interactions with chain 0, 1 interactions with chain K, 2 interactions with chain 2- Hydrophobic interactions: B:F.108, 0:Y.18, 2:L.16, 2:F.19
- Water bridges: B:R.18, B:R.18
- Salt bridges: B:R.18, 0:R.14, K:R.7
- Hydrogen bonds: 0:R.14, 0:R.14
- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.10: 27 residues within 4Å:- Chain A: F.211, M.214, H.215, L.218, H.252, F.255, I.259, A.263, S.264, F.265, L.271, L.275
- Chain D: V.30, F.38, P.39, A.41, Y.42
- Chain F: V.21, A.22, T.25, L.26
- Chain N: T.24
- Ligands: CLA.5, PHO.68, CLA.75, CLA.76, SQD.85
16 PLIP interactions:10 interactions with chain A, 2 interactions with chain F, 4 interactions with chain D- Hydrophobic interactions: A:F.211, A:L.218, A:H.252, A:F.255, A:F.255, A:I.259, A:L.271, A:L.271, A:L.275, F:V.21, F:L.26, D:V.30, D:P.39, D:A.41, D:Y.42
- Hydrogen bonds: A:F.265
PL9.78: 30 residues within 4Å:- Chain A: F.52, I.77, I.176
- Chain D: M.198, M.199, A.202, G.203, L.209, H.214, T.217, M.246, A.249, N.250, W.253, F.257, I.259, A.260, F.261, L.267, F.270, F.273, V.274, G.278
- Chain K: L.23, V.26
- Chain M: F.10
- Ligands: CLA.4, PHO.6, CLA.24, LHG.99
23 PLIP interactions:13 interactions with chain D, 5 interactions with chain A, 2 interactions with chain K, 3 interactions with chain M- Hydrophobic interactions: D:M.199, D:L.209, D:T.217, D:W.253, D:F.257, D:F.261, D:F.261, D:L.267, D:F.270, D:F.273, D:V.274, A:F.52, A:F.52, A:I.77, A:I.77, A:I.176, K:L.23, K:V.26, M:F.10, M:F.10, M:F.10
- Hydrogen bonds: D:T.217, D:F.261
PL9.117: 28 residues within 4Å:- Chain 3: T.24, L.28
- Chain Q: F.211, M.214, H.215, L.218, A.251, H.252, F.255, I.259, S.264, F.265, L.271, L.275
- Chain T: V.30, F.38, P.39, Y.42, L.45
- Chain V: V.18, A.22, T.25, L.26
- Ligands: CLA.112, LHG.122, PHO.176, CLA.179, SQD.191
21 PLIP interactions:6 interactions with chain T, 1 interactions with chain 3, 1 interactions with chain V, 13 interactions with chain Q- Hydrophobic interactions: T:V.30, T:F.38, T:F.38, T:P.39, T:Y.42, T:L.45, 3:L.28, V:V.18, Q:F.211, Q:F.211, Q:L.218, Q:A.251, Q:H.252, Q:F.255, Q:F.255, Q:I.259, Q:F.265, Q:L.271, Q:L.271, Q:L.275
- Hydrogen bonds: Q:F.265
PL9.181: 32 residues within 4Å:- Chain 0: L.23, V.26
- Chain 2: F.10
- Chain Q: V.49, F.52, I.77, I.176
- Chain T: M.198, M.199, A.202, G.203, L.209, H.214, T.217, M.246, A.249, N.250, W.253, F.257, I.259, A.260, F.261, L.267, F.270, F.273, V.274, G.278
- Ligands: CLA.111, PHO.113, CLA.131, LHG.183, LHG.203
22 PLIP interactions:3 interactions with chain 2, 5 interactions with chain Q, 13 interactions with chain T, 1 interactions with chain 0- Hydrophobic interactions: 2:F.10, 2:F.10, 2:F.10, Q:V.49, Q:F.52, Q:F.52, Q:I.77, Q:I.176, T:M.199, T:L.209, T:T.217, T:W.253, T:F.257, T:F.261, T:F.261, T:L.267, T:F.270, T:F.273, T:V.274, 0:L.23
- Hydrogen bonds: T:T.217, T:F.261
- 33 x LFA: EICOSANE(Non-covalent)(Non-functional Binders)
LFA.12: 6 residues within 4Å:- Chain A: N.12, L.13, W.14, F.17
- Chain H: F.14
- Ligands: BCR.8
Ligand excluded by PLIPLFA.14: 8 residues within 4Å:- Chain A: P.196, Q.199, A.203, F.302
- Chain D: N.72
- Ligands: CLA.5, LMG.81, LFA.96
Ligand excluded by PLIPLFA.38: 6 residues within 4Å:- Chain B: W.91, L.149
- Ligands: CLA.21, CLA.22, CLA.23, BCR.36
Ligand excluded by PLIPLFA.41: 3 residues within 4Å:- Chain B: F.144
- Chain G: L.14
- Ligands: CLA.32
Ligand excluded by PLIPLFA.42: 6 residues within 4Å:- Chain B: L.148, G.152, F.156, F.162
- Ligands: CLA.21, CLA.23
Ligand excluded by PLIPLFA.45: 3 residues within 4Å:- Chain B: F.90
- Ligands: PLM.44, PLM.197
Ligand excluded by PLIPLFA.65: 3 residues within 4Å:- Chain C: Y.131
- Ligands: CLA.61, BCR.97
Ligand excluded by PLIPLFA.71: 12 residues within 4Å:- Chain B: L.474, F.475
- Chain D: W.32, S.33, L.36, F.130, E.131, R.134
- Chain N: L.21
- Ligands: CLA.25, PLM.72, LFA.73
Ligand excluded by PLIPLFA.73: 7 residues within 4Å:- Chain D: F.15, W.32
- Chain N: F.25
- Ligands: LMT.70, LFA.71, PLM.72, LFA.86
Ligand excluded by PLIPLFA.74: 2 residues within 4Å:- Chain D: W.14
- Chain N: I.29
Ligand excluded by PLIPLFA.86: 7 residues within 4Å:- Chain G: P.29, A.32, G.36, L.39
- Ligands: LMT.70, PLM.72, LFA.73
Ligand excluded by PLIPLFA.89: 3 residues within 4Å:- Chain G: I.10, L.11, P.13
Ligand excluded by PLIPLFA.93: 4 residues within 4Å:- Chain H: M.1, T.3, L.4
- Ligands: LFA.154
Ligand excluded by PLIPLFA.96: 7 residues within 4Å:- Chain A: P.196, L.200, F.300
- Chain C: N.393
- Chain I: F.29, Y.33
- Ligands: LFA.14
Ligand excluded by PLIPLFA.98: 3 residues within 4Å:- Chain C: W.23
- Chain J: F.45
- Ligands: BCR.105
Ligand excluded by PLIPLFA.103: 3 residues within 4Å:- Ligands: SQD.100, LMT.102, CLA.138
Ligand excluded by PLIPLFA.104: 7 residues within 4Å:- Chain D: W.93
- Chain N: I.12, S.16, G.17, V.20
- Ligands: CLA.76, DGD.82
Ligand excluded by PLIPLFA.106: 7 residues within 4Å:- Chain C: A.111, F.115
- Chain P: M.19, S.44, W.47
- Ligands: CLA.59, BCR.67
Ligand excluded by PLIPLFA.119: 6 residues within 4Å:- Chain Q: N.12, L.13, W.14, F.17
- Chain X: F.14
- Ligands: PLM.199
Ligand excluded by PLIPLFA.146: 5 residues within 4Å:- Chain R: W.91, L.149
- Ligands: CLA.129, CLA.130, BCR.143
Ligand excluded by PLIPLFA.148: 3 residues within 4Å:- Chain R: I.211, L.218, V.219
Ligand excluded by PLIPLFA.149: 2 residues within 4Å:- Chain R: F.215
- Ligands: CLA.133
Ligand excluded by PLIPLFA.151: 4 residues within 4Å:- Chain R: F.144, L.145
- Chain W: L.14
- Ligands: CLA.139
Ligand excluded by PLIPLFA.154: 4 residues within 4Å:- Chain R: F.90
- Ligands: PLM.92, LFA.93, PLM.153
Ligand excluded by PLIPLFA.185: 10 residues within 4Å:- Chain 3: L.21
- Chain R: L.474, F.475
- Chain T: W.32, S.33, L.36, F.130, R.134
- Ligands: CLA.132, PLM.145
Ligand excluded by PLIPLFA.187: 4 residues within 4Å:- Chain 3: F.25
- Chain T: F.15, W.32
- Ligands: PLM.145
Ligand excluded by PLIPLFA.192: 3 residues within 4Å:- Chain W: P.29, A.32
- Ligands: LFA.195
Ligand excluded by PLIPLFA.194: 3 residues within 4Å:- Chain W: I.10, L.11, P.13
Ligand excluded by PLIPLFA.195: 4 residues within 4Å:- Chain T: W.14
- Chain W: W.25
- Ligands: LMT.186, LFA.192
Ligand excluded by PLIPLFA.200: 2 residues within 4Å:- Chain X: F.14, F.15
Ligand excluded by PLIPLFA.202: 3 residues within 4Å:- Chain S: W.23
- Chain Z: F.45
- Ligands: BCR.211
Ligand excluded by PLIPLFA.207: 3 residues within 4Å:- Ligands: CLA.31, SQD.204, LMT.206
Ligand excluded by PLIPLFA.209: 6 residues within 4Å:- Chain 3: I.12, S.16, G.17, V.20
- Chain T: W.93
- Ligands: CLA.179
Ligand excluded by PLIP- 24 x PLM: PALMITIC ACID(Non-covalent)
PLM.13: 4 residues within 4Å:- Chain A: R.16, W.20
- Ligands: BCR.8, PLM.91
Ligand excluded by PLIPPLM.15: 7 residues within 4Å:- Chain A: D.103, L.106
- Chain R: W.75, S.76, E.94
- Ligands: BCR.8, LMT.69
Ligand excluded by PLIPPLM.39: 1 residues within 4Å:- Chain B: I.203
Ligand excluded by PLIPPLM.40: 3 residues within 4Å:- Chain B: F.215, L.218, V.219
Ligand excluded by PLIPPLM.43: 5 residues within 4Å:- Chain B: W.185, A.204, I.207, V.208
- Ligands: CLA.18
Ligand excluded by PLIPPLM.44: 5 residues within 4Å:- Chain B: W.75, D.87
- Chain Q: L.102
- Ligands: LFA.45, PLM.196
Ligand excluded by PLIPPLM.66: 3 residues within 4Å:- Chain C: F.134
- Ligands: CLA.61, BCR.97
Ligand excluded by PLIPPLM.72: 12 residues within 4Å:- Chain B: A.228, L.229, R.230
- Chain D: K.23, R.134
- Chain G: M.35
- Ligands: CLA.25, CLA.26, LMT.70, LFA.71, LFA.73, LFA.86
Ligand excluded by PLIPPLM.83: 5 residues within 4Å:- Chain E: I.27, P.28, F.31, I.32, W.35
Ligand excluded by PLIPPLM.90: 2 residues within 4Å:- Chain D: W.14
- Chain G: W.25
Ligand excluded by PLIPPLM.91: 8 residues within 4Å:- Chain H: I.10, V.11, F.14, F.15, L.17
- Ligands: CLA.7, BCR.8, PLM.13
Ligand excluded by PLIPPLM.92: 7 residues within 4Å:- Chain A: A.100
- Chain H: M.1, L.4
- Ligands: CLA.7, BCR.8, PLM.153, LFA.154
Ligand excluded by PLIPPLM.94: 3 residues within 4Å:- Chain A: W.14
- Chain H: F.14, F.21
Ligand excluded by PLIPPLM.107: 10 residues within 4Å:- Chain B: L.39, W.75, S.76, L.98
- Chain Q: P.56, Y.73, D.103, L.106
- Ligands: BCR.115, LMT.175
Ligand excluded by PLIPPLM.120: 2 residues within 4Å:- Chain Q: R.16, W.20
Ligand excluded by PLIPPLM.145: 9 residues within 4Å:- Chain R: A.228, L.229, R.230
- Chain T: K.23
- Ligands: CLA.132, CLA.133, LFA.185, LMT.186, LFA.187
Ligand excluded by PLIPPLM.147: 1 residues within 4Å:- Chain R: I.203
Ligand excluded by PLIPPLM.150: 6 residues within 4Å:- Chain R: L.148, F.156, L.161, F.162
- Ligands: CLA.128, CLA.130
Ligand excluded by PLIPPLM.152: 5 residues within 4Å:- Chain R: W.185, A.204, I.207, V.208
- Ligands: CLA.125
Ligand excluded by PLIPPLM.153: 9 residues within 4Å:- Chain A: I.50, L.102
- Chain R: W.75, D.87, L.98
- Ligands: BCR.8, SQD.11, PLM.92, LFA.154
Ligand excluded by PLIPPLM.189: 4 residues within 4Å:- Chain U: I.27, P.28, F.31, W.35
Ligand excluded by PLIPPLM.196: 5 residues within 4Å:- Chain X: M.1, L.4
- Ligands: PLM.44, CLA.114, BCR.115
Ligand excluded by PLIPPLM.197: 4 residues within 4Å:- Chain X: M.1, T.3, L.4
- Ligands: LFA.45
Ligand excluded by PLIPPLM.199: 5 residues within 4Å:- Chain Q: W.14
- Chain X: L.17, L.18, F.21
- Ligands: LFA.119
Ligand excluded by PLIP- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.16: 9 residues within 4Å:- Chain A: H.215, E.244, Y.246, H.272
- Chain D: H.214, Y.244, K.264, H.268
- Ligands: FE2.1
3 PLIP interactions:2 interactions with chain D, 1 interactions with chain A- Hydrogen bonds: D:Y.244, D:K.264, A:Y.246
BCT.177: 9 residues within 4Å:- Chain Q: H.215, E.244, Y.246, H.272
- Chain T: H.214, Y.244, K.264, H.268
- Ligands: FE2.108
4 PLIP interactions:2 interactions with chain T, 2 interactions with chain Q- Hydrogen bonds: T:Y.244, T:Y.244, Q:Y.246, Q:Y.246
- 9 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.17: 24 residues within 4Å:- Chain A: R.140, W.142, V.145, A.146, F.273, A.276, A.277, V.280, W.284, F.285
- Chain C: F.21, W.24, A.25, W.431, R.435
- Chain D: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.9, CLA.52, CLA.56
19 PLIP interactions:5 interactions with chain C, 4 interactions with chain D, 10 interactions with chain A- Hydrophobic interactions: C:W.24, C:W.24, C:W.431, A:W.142, A:V.145, A:A.146, A:F.273, A:A.276, A:V.280, A:F.285
- Hydrogen bonds: C:R.435, C:R.435, D:N.220, D:A.229, D:S.230, D:T.231
- Water bridges: A:R.140
- Salt bridges: A:R.140, A:R.140
LHG.79: 25 residues within 4Å:- Chain A: S.232, N.234
- Chain B: W.5, Y.6, R.7, L.461, F.464, W.468
- Chain D: R.139, Y.141, I.144, W.266, F.269, L.272, F.273, V.276, T.277
- Chain K: L.23, I.24
- Chain L: P.18
- Ligands: CLA.24, CLA.28, CLA.30, LMG.37, LHG.99
15 PLIP interactions:5 interactions with chain D, 6 interactions with chain B, 1 interactions with chain L, 2 interactions with chain A, 1 interactions with chain K- Hydrophobic interactions: D:F.273, D:F.273, D:V.276, B:W.5, B:L.461, B:F.464, L:P.18, K:I.24
- Hydrogen bonds: D:R.139, B:Y.6, A:S.232, A:N.234
- Water bridges: D:Y.141, B:R.7
- Salt bridges: B:R.7
LHG.80: 29 residues within 4Å:- Chain A: M.37, R.129
- Chain D: I.256, F.257, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Chain K: N.13, T.15, S.16, Y.18, L.19, L.22, V.26, L.29
- Chain M: F.10, I.13, F.17, A.20, I.21
- Ligands: CLA.3, CLA.4, PHO.6, SQD.11, LHG.99
17 PLIP interactions:8 interactions with chain D, 5 interactions with chain K, 4 interactions with chain M- Hydrophobic interactions: D:F.257, D:F.257, D:F.261, D:F.270, D:F.270, K:Y.18, K:V.26, K:L.29, M:F.10, M:I.13, M:F.17, M:F.17
- Hydrogen bonds: D:S.262, D:S.262, D:N.263, K:N.13, K:N.13
LHG.99: 27 residues within 4Å:- Chain A: S.232, N.234
- Chain B: P.4, W.5, Y.6
- Chain D: W.266, F.269, F.270, F.273
- Chain K: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23
- Chain L: V.17, P.18, F.21
- Ligands: CLA.4, CLA.28, CLA.31, BCR.34, PL9.78, LHG.79, LHG.80
18 PLIP interactions:4 interactions with chain D, 6 interactions with chain K, 2 interactions with chain L, 3 interactions with chain A, 3 interactions with chain B- Hydrophobic interactions: D:W.266, D:F.269, D:F.270, D:F.273, K:L.22, K:L.22, K:L.23, L:V.17, L:P.18, B:W.5, B:W.5
- Hydrogen bonds: K:E.11, K:N.13, K:S.16, A:S.232, A:S.232, A:N.234, B:W.5
LHG.121: 23 residues within 4Å:- Chain Q: R.140, W.142, A.146, F.273, A.276, V.280, W.284, F.285
- Chain S: F.21, W.24, A.25, W.431, R.435
- Chain T: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.116, CLA.159, CLA.163, DGD.173
18 PLIP interactions:9 interactions with chain Q, 4 interactions with chain T, 5 interactions with chain S- Hydrophobic interactions: Q:W.142, Q:A.146, Q:F.273, Q:A.276, Q:V.280, Q:W.284, Q:F.285, S:W.24, S:W.24, S:W.431
- Water bridges: Q:R.140
- Salt bridges: Q:R.140
- Hydrogen bonds: T:N.220, T:A.229, T:S.230, T:T.231, S:R.435, S:R.435
LHG.122: 23 residues within 4Å:- Chain Q: L.258, I.259, F.260, Y.262, A.263, S.264, F.265, N.266
- Chain T: F.27, V.28, L.37, F.38, F.125
- Chain U: T.4, E.7, R.8, P.9, F.10, S.11
- Chain V: R.19, A.22
- Ligands: CLA.112, PL9.117
14 PLIP interactions:5 interactions with chain T, 4 interactions with chain U, 2 interactions with chain V, 3 interactions with chain Q- Hydrophobic interactions: T:F.27, T:V.28, T:L.37, T:F.38, T:F.125, U:F.10, V:A.22, Q:F.260, Q:Y.262, Q:F.265
- Hydrogen bonds: U:E.7, U:F.10, U:S.11, V:R.19
LHG.182: 25 residues within 4Å:- Chain 0: L.23, I.24
- Chain 1: P.18
- Chain Q: S.232, N.234
- Chain R: W.5, Y.6, R.7, L.461, F.464, W.468
- Chain T: R.139, Y.141, I.144, W.266, F.269, F.273, V.276, T.277, W.280
- Ligands: CLA.131, CLA.135, CLA.137, LMG.144, LHG.203
16 PLIP interactions:6 interactions with chain T, 1 interactions with chain 1, 6 interactions with chain R, 2 interactions with chain Q, 1 interactions with chain 0- Hydrophobic interactions: T:F.273, T:F.273, T:V.276, T:W.280, 1:P.18, R:W.5, R:L.461, R:F.464, 0:I.24
- Hydrogen bonds: T:R.139, R:Y.6, Q:S.232, Q:N.234
- Water bridges: T:Y.141, R:R.7
- Salt bridges: R:R.7
LHG.183: 29 residues within 4Å:- Chain 0: N.13, T.15, S.16, Y.18, L.19, L.22, V.26, L.29
- Chain 2: F.10, I.13, F.17, A.20, I.21
- Chain Q: M.37, R.129
- Chain T: I.256, F.257, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Ligands: CLA.110, CLA.111, PHO.113, PL9.181, LHG.203
21 PLIP interactions:8 interactions with chain T, 5 interactions with chain 2, 8 interactions with chain 0- Hydrophobic interactions: T:F.257, T:F.257, T:F.261, T:F.270, T:F.270, 2:F.10, 2:F.17, 2:F.17, 2:F.17, 2:A.20, 0:Y.18, 0:L.22, 0:L.22, 0:V.26, 0:L.29
- Hydrogen bonds: T:S.262, T:S.262, T:N.263, 0:N.13, 0:N.13, 0:T.15
LHG.203: 28 residues within 4Å:- Chain 0: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23
- Chain 1: V.17, P.18, F.21
- Chain Q: S.232, N.234
- Chain R: P.4, W.5, Y.6
- Chain T: W.266, F.269, F.270, F.273
- Ligands: CLA.111, CLA.135, CLA.138, BCR.141, LMG.144, PL9.181, LHG.182, LHG.183
19 PLIP interactions:3 interactions with chain 1, 3 interactions with chain Q, 6 interactions with chain 0, 4 interactions with chain T, 3 interactions with chain R- Hydrophobic interactions: 1:V.17, 1:P.18, 1:F.21, 0:L.19, 0:L.22, T:W.266, T:F.269, T:F.270, T:F.273, R:W.5, R:W.5
- Hydrogen bonds: Q:S.232, Q:S.232, Q:N.234, 0:E.11, 0:E.11, 0:N.13, 0:S.16, R:W.5
- 8 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.37: 22 residues within 4Å:- Chain B: Y.40, T.327, G.328, P.329, K.332, F.453, A.454, V.457
- Chain D: I.284
- Chain K: F.35
- Chain L: N.4, A.10, L.13, F.14, V.17
- Ligands: CLA.24, CLA.30, CLA.31, BCR.34, BCR.35, LHG.79, LMT.101
14 PLIP interactions:5 interactions with chain L, 1 interactions with chain D, 7 interactions with chain B, 1 interactions with chain K- Hydrophobic interactions: L:L.13, L:L.13, L:F.14, L:F.14, L:V.17, D:I.284, B:F.453, B:A.454, B:V.457, K:F.35
- Hydrogen bonds: B:T.327, B:T.327
- Water bridges: B:K.332, B:K.332
LMG.47: 23 residues within 4Å:- Chain A: F.93, W.97, E.98, F.117, L.121, S.124, F.155
- Chain C: L.201, L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269, F.272
- Chain H: K.5, Y.9
- Ligands: CLA.7, CLA.53, CLA.54, DGD.63
17 PLIP interactions:6 interactions with chain A, 9 interactions with chain C, 2 interactions with chain H- Hydrophobic interactions: A:F.93, A:F.117, A:F.117, A:L.121, A:F.155, C:P.205, C:F.206, C:W.211, C:W.211, C:W.211, C:F.272
- Hydrogen bonds: A:W.97, C:E.209, C:E.209, H:K.5, H:Y.9
- Water bridges: C:S.204
LMG.64: 12 residues within 4Å:- Chain C: V.49, W.85, P.98, V.101, V.102, V.105, H.106, S.109, F.170, G.171
- Ligands: CLA.51, CLA.61
4 PLIP interactions:4 interactions with chain C- Hydrophobic interactions: C:V.49, C:W.85, C:V.101, C:V.105
LMG.81: 19 residues within 4Å:- Chain D: L.49, Y.67, G.70, C.71, N.72, F.73
- Chain F: L.26, A.27, T.30, I.37, M.40, Q.41, R.45
- Chain I: F.28, G.31, A.32
- Ligands: CLA.5, LFA.14, BCR.77
13 PLIP interactions:6 interactions with chain D, 3 interactions with chain I, 4 interactions with chain F- Hydrophobic interactions: D:L.49, D:F.73, D:F.73, D:F.73, D:F.73, I:F.28, F:L.26
- Hydrogen bonds: D:F.73, I:F.28, I:G.31, F:M.40, F:Q.41, F:R.45
LMG.144: 23 residues within 4Å:- Chain 0: F.35
- Chain 1: N.4, A.10, L.13, F.14, V.17
- Chain R: Y.40, T.327, G.328, P.329, K.332, F.453, A.454, V.457
- Chain T: I.284
- Ligands: CLA.131, CLA.137, CLA.138, BCR.141, BCR.142, LHG.182, LHG.203, LMT.205
14 PLIP interactions:4 interactions with chain 1, 7 interactions with chain R, 1 interactions with chain T, 2 interactions with chain 0- Hydrophobic interactions: 1:L.13, 1:F.14, 1:V.17, R:F.453, R:A.454, R:V.457, T:I.284, 0:F.35, 0:F.35
- Hydrogen bonds: 1:N.4, R:T.327, R:T.327
- Water bridges: R:K.332, R:K.332
LMG.155: 25 residues within 4Å:- Chain Q: F.93, W.97, E.98, F.117, L.120, L.121, S.124, F.155, L.159
- Chain S: L.201, L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269, F.272
- Chain X: K.5, Y.9
- Ligands: CLA.114, CLA.160, CLA.161, DGD.170
17 PLIP interactions:2 interactions with chain X, 6 interactions with chain Q, 9 interactions with chain S- Hydrogen bonds: X:K.5, X:Y.9, Q:W.97, S:E.209
- Hydrophobic interactions: Q:F.117, Q:L.120, Q:L.121, Q:F.155, Q:L.159, S:P.205, S:F.206, S:F.206, S:W.211, S:W.211, S:W.211, S:F.272
- Water bridges: S:S.204
LMG.172: 14 residues within 4Å:- Chain 5: F.59
- Chain S: V.49, W.85, D.95, F.97, P.98, V.101, V.102, V.105, H.106, S.109
- Ligands: CLA.158, CLA.168, BCR.201
8 PLIP interactions:8 interactions with chain S- Hydrophobic interactions: S:V.49, S:W.85, S:W.85, S:V.101, S:V.102, S:V.105, S:V.105
- Hydrogen bonds: S:D.95
LMG.184: 21 residues within 4Å:- Chain T: L.45, L.49, Y.67, G.70, C.71, N.72, F.73
- Chain V: L.26, T.30, I.37, M.40, Q.41, R.45
- Chain Y: F.28, G.31, A.32
- Ligands: CLA.112, DGD.171, DGD.173, CLA.178, BCR.180
18 PLIP interactions:5 interactions with chain V, 10 interactions with chain T, 3 interactions with chain Y- Hydrophobic interactions: V:L.26, V:T.30, T:L.45, T:L.49, T:L.49, T:F.73, T:F.73, T:F.73, T:F.73, Y:F.28
- Hydrogen bonds: V:M.40, V:Q.41, V:R.45, T:G.70, T:F.73, Y:F.28, Y:G.31
- Water bridges: T:N.72
- 13 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.48: 8 residues within 4Å:- Chain A: W.14, E.15
- Chain C: W.247, R.250
- Chain H: L.24, S.25, G.26, R.30
7 PLIP interactions:5 interactions with chain C, 2 interactions with chain H- Hydrophobic interactions: C:W.247, C:W.247, C:W.247
- Hydrogen bonds: C:R.250, C:R.250, H:S.25, H:R.30
LMT.69: 9 residues within 4Å:- Chain A: I.53, L.72, Y.73
- Chain D: R.304
- Chain R: L.39, L.42, A.43
- Ligands: PLM.15, LMT.124
8 PLIP interactions:2 interactions with chain D, 3 interactions with chain R, 3 interactions with chain A- Hydrogen bonds: D:R.304, D:R.304, R:A.43
- Hydrophobic interactions: R:L.39, R:L.39, A:I.53, A:I.53, A:L.72
LMT.70: 12 residues within 4Å:- Chain B: R.224, A.228
- Chain D: F.15, D.19, K.23
- Chain G: W.25, M.31, A.32, M.35
- Ligands: PLM.72, LFA.73, LFA.86
6 PLIP interactions:2 interactions with chain B, 3 interactions with chain D, 1 interactions with chain G- Hydrophobic interactions: B:A.228, D:F.15, D:F.15, G:A.32
- Salt bridges: B:R.224
- Hydrogen bonds: D:D.19
LMT.101: 10 residues within 4Å:- Chain 1: E.2, L.8, A.12
- Chain 2: I.4, T.5, F.8
- Chain B: Y.40
- Chain L: Q.5, L.6
- Ligands: LMG.37
9 PLIP interactions:4 interactions with chain 2, 1 interactions with chain 1, 2 interactions with chain B, 2 interactions with chain L- Hydrophobic interactions: 2:I.4, 2:I.4, 2:T.5, 2:F.8, 1:L.8
- Water bridges: B:K.332, B:L.437
- Hydrogen bonds: L:Q.5, L:Q.5
LMT.102: 13 residues within 4Å:- Chain 0: P.9, V.10
- Chain 1: V.17, I.24, Q.28, Q.32
- Chain L: V.27, E.30, S.31, Q.32, Q.33
- Ligands: LFA.103, CLA.138
10 PLIP interactions:4 interactions with chain L, 4 interactions with chain 1, 2 interactions with chain 0- Hydrophobic interactions: L:V.27, 1:V.17, 1:I.24
- Hydrogen bonds: L:E.30, L:Q.33, L:Q.33, 1:Q.28, 1:Q.32, 0:V.10, 0:V.10
LMT.124: 7 residues within 4Å:- Chain A: L.72
- Chain M: M.1, I.4
- Chain R: S.36, A.43
- Ligands: LMT.69, BCR.123
3 PLIP interactions:1 interactions with chain M, 1 interactions with chain R, 1 interactions with chain A- Hydrophobic interactions: M:I.4, R:A.43, A:L.72
LMT.175: 10 residues within 4Å:- Chain B: L.39, L.42, A.43
- Chain Q: I.50, I.53, L.72, Y.73
- Chain T: R.304
- Ligands: PLM.107, LMT.208
9 PLIP interactions:2 interactions with chain B, 5 interactions with chain Q, 2 interactions with chain T- Hydrophobic interactions: B:L.39, Q:I.50, Q:I.53, Q:I.53, Q:L.72
- Hydrogen bonds: B:A.43, Q:Y.73, T:R.304, T:R.304
LMT.186: 11 residues within 4Å:- Chain R: R.224, L.225, A.228
- Chain T: F.15, D.19, K.23
- Chain W: W.25, M.31, A.32
- Ligands: PLM.145, LFA.195
8 PLIP interactions:4 interactions with chain R, 2 interactions with chain T, 2 interactions with chain W- Hydrophobic interactions: R:L.225, R:A.228, T:F.15, W:W.25, W:A.32
- Hydrogen bonds: R:R.224, T:K.23
- Salt bridges: R:R.224
LMT.198: 11 residues within 4Å:- Chain Q: W.14, E.15
- Chain S: W.247, R.250
- Chain X: V.20, L.24, S.25, G.26, R.30
- Ligands: CLA.114, CLA.161
8 PLIP interactions:1 interactions with chain Q, 4 interactions with chain S, 3 interactions with chain X- Hydrogen bonds: Q:E.15, S:R.250, S:R.250, X:R.30
- Hydrophobic interactions: S:W.247, S:W.247, X:V.20, X:L.24
LMT.205: 10 residues within 4Å:- Chain 1: L.6
- Chain L: M.1, L.8
- Chain M: M.1, I.4, T.5, F.8
- Chain R: Y.40
- Ligands: BCR.141, LMG.144
6 PLIP interactions:2 interactions with chain M, 2 interactions with chain R, 1 interactions with chain L, 1 interactions with chain 1- Hydrophobic interactions: M:I.4, M:I.4, L:L.8, 1:L.6
- Water bridges: R:K.332, R:L.437
LMT.206: 15 residues within 4Å:- Chain 1: L.16, V.27, E.30, S.31, Q.32, Q.33
- Chain K: P.9, V.10
- Chain L: V.17, I.24, L.25, Q.28, Q.32
- Ligands: CLA.31, LFA.207
11 PLIP interactions:6 interactions with chain L, 2 interactions with chain K, 3 interactions with chain 1- Hydrophobic interactions: L:V.17, L:I.24, L:I.24, L:L.25, 1:L.16
- Hydrogen bonds: L:Q.28, L:Q.32, K:V.10, K:V.10, 1:E.30, 1:Q.33
LMT.208: 13 residues within 4Å:- Chain 2: M.1, I.4, V.7, F.8, A.11
- Chain B: S.36, L.39, Y.40, A.43
- Chain Q: L.72
- Ligands: BCR.35, BCR.46, LMT.175
9 PLIP interactions:2 interactions with chain Q, 4 interactions with chain 2, 3 interactions with chain B- Hydrophobic interactions: Q:L.72, 2:I.4, 2:V.7, 2:A.11, B:Y.40, B:A.43
- Water bridges: Q:L.71, 2:E.2
- Hydrogen bonds: B:A.43
LMT.212: 16 residues within 4Å:- Chain 5: M.19, Y.27, W.33, K.37, I.40, F.41, S.44, W.47, I.48
- Chain S: A.111, F.115, Y.119, R.123
- Ligands: CLA.166, CLA.168, BCR.174
11 PLIP interactions:8 interactions with chain 5, 3 interactions with chain S- Hydrophobic interactions: 5:M.19, 5:W.47, 5:W.47, 5:I.48, S:A.111, S:F.115, S:F.115
- Hydrogen bonds: 5:Y.27, 5:Y.27
- Salt bridges: 5:K.37, 5:K.37
- 9 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.63: 32 residues within 4Å:- Chain A: L.91, S.148, L.151, A.152, F.155, I.160, I.163
- Chain C: P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, F.272, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, F.423, L.426
- Ligands: LMG.47, CLA.53, CLA.54
21 PLIP interactions:17 interactions with chain C, 4 interactions with chain A- Hydrophobic interactions: C:F.206, C:F.206, C:W.211, C:V.213, C:F.272, C:F.272, C:F.272, C:F.423, C:L.426, A:L.151, A:F.155, A:I.160, A:I.163
- Hydrogen bonds: C:G.208, C:N.282, C:N.282, C:T.283, C:T.283, C:D.348, C:R.350, C:R.350
DGD.82: 12 residues within 4Å:- Chain D: L.92, G.99, D.100, F.101, T.102
- Chain E: F.37, D.45, V.46, F.47
- Chain F: F.32
- Ligands: BCR.77, LFA.104
8 PLIP interactions:6 interactions with chain D, 1 interactions with chain E, 1 interactions with chain F- Hydrophobic interactions: D:L.92, D:F.101, D:F.101, D:F.101, D:F.101, E:F.37, F:F.32
- Hydrogen bonds: D:F.101
DGD.88: 28 residues within 4Å:- Chain B: Y.193, F.250, G.254, Y.258, Y.273, Q.274, S.277, Y.279, T.452, A.456, F.463
- Chain D: G.86, H.87, F.120, I.123, I.159, L.162, G.163, S.165, L.291
- Chain G: L.46, Y.49, N.50, V.60, S.61, W.62
- Ligands: CLA.19, CLA.25
28 PLIP interactions:11 interactions with chain B, 8 interactions with chain D, 9 interactions with chain G- Hydrophobic interactions: B:F.250, B:F.250, B:Y.258, B:T.452, B:A.456, B:F.463, B:F.463, D:F.120, D:I.159, D:L.162, D:L.291, G:Y.49, G:Y.49, G:Y.49
- Hydrogen bonds: B:Y.193, B:Y.193, B:Y.258, B:S.277, D:H.87, D:H.87, D:S.165, G:N.50, G:V.60, G:S.61, G:W.62
- Water bridges: D:H.87, G:S.61, G:S.61
DGD.95: 11 residues within 4Å:- Chain A: H.195, F.197, T.292
- Chain C: Q.72, L.392, S.394, N.406, S.417
- Chain I: F.29, Y.33
- Ligands: CLA.52
7 PLIP interactions:3 interactions with chain C, 3 interactions with chain A, 1 interactions with chain I- Hydrophobic interactions: C:L.392, A:F.197, A:F.197, A:T.292, I:F.29
- Hydrogen bonds: C:S.394, C:N.406
DGD.170: 32 residues within 4Å:- Chain Q: L.91, S.148, L.151, A.152, F.155, I.160, I.163
- Chain S: P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, F.272, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, F.423, L.426
- Ligands: LMG.155, CLA.160, CLA.161
20 PLIP interactions:16 interactions with chain S, 4 interactions with chain Q- Hydrophobic interactions: S:F.206, S:W.211, S:V.213, S:F.272, S:F.272, S:F.272, S:F.423, S:L.426, Q:L.151, Q:F.155, Q:I.160, Q:I.163
- Hydrogen bonds: S:G.208, S:N.282, S:N.282, S:T.283, S:T.283, S:D.348, S:R.350, S:R.350
DGD.171: 22 residues within 4Å:- Chain Q: H.195, F.197, T.292, L.297
- Chain S: E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417, V.420
- Chain Y: F.29, Y.33
- Ligands: CLA.159, DGD.173, BCR.180, LMG.184
15 PLIP interactions:4 interactions with chain Q, 10 interactions with chain S, 1 interactions with chain Y- Hydrophobic interactions: Q:F.197, Q:F.197, Q:T.292, Q:L.297, S:L.392, S:L.392, S:V.420, Y:F.29
- Hydrogen bonds: S:S.394, S:N.406, S:N.406, S:V.408, S:V.408, S:W.413
- Water bridges: S:G.73
DGD.173: 24 residues within 4Å:- Chain Q: P.196, F.197, Q.199, L.200, A.203, F.300, F.302, S.305
- Chain S: L.392, N.393, V.395, N.403, V.405, N.406
- Chain T: L.74
- Chain Y: F.29, A.32, Y.33
- Ligands: CLA.112, LHG.121, CLA.159, CLA.163, DGD.171, LMG.184
14 PLIP interactions:2 interactions with chain Y, 4 interactions with chain S, 7 interactions with chain Q, 1 interactions with chain T- Hydrophobic interactions: Y:Y.33, Q:P.196, Q:F.197, Q:Q.199, Q:L.200, Q:L.200, Q:A.203, Q:F.300, T:L.74
- Hydrogen bonds: Y:Y.33, S:N.393, S:N.403, S:N.403, S:V.405
DGD.188: 12 residues within 4Å:- Chain T: L.92, G.99, D.100, F.101, T.102, R.103
- Chain U: F.37, D.45, V.46, F.47
- Ligands: CLA.179, BCR.180
7 PLIP interactions:5 interactions with chain T, 2 interactions with chain U- Hydrophobic interactions: T:L.92, T:F.101, T:F.101, T:F.101, T:F.101, U:F.37, U:V.46
DGD.193: 27 residues within 4Å:- Chain R: Y.193, F.250, G.254, Y.258, Y.273, Q.274, S.277, Y.279, T.452, A.456, F.463
- Chain T: G.86, H.87, I.123, I.159, L.162, G.163, S.165, L.291
- Chain W: L.46, Y.49, N.50, V.60, S.61, W.62
- Ligands: CLA.126, CLA.132
28 PLIP interactions:11 interactions with chain R, 7 interactions with chain T, 9 interactions with chain W, 1 interactions with chain U- Hydrophobic interactions: R:F.250, R:F.250, R:Y.258, R:T.452, R:A.456, R:F.463, R:F.463, T:I.159, T:L.162, T:L.291, W:Y.49, W:Y.49, W:Y.49
- Hydrogen bonds: R:Y.193, R:Y.193, R:Y.258, R:S.277, T:H.87, T:H.87, T:S.165, W:N.50, W:V.60, W:S.61, W:W.62
- Water bridges: T:H.87, W:S.61, W:S.61, U:R.69
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.84: 17 residues within 4Å:- Chain E: R.8, F.10, I.13, R.18, Y.19, H.23, T.26, I.27, L.30
- Chain F: I.15, R.19, W.20, V.23, H.24, A.27, V.28, I.31
17 PLIP interactions:10 interactions with chain E, 7 interactions with chain F,- Hydrophobic interactions: E:F.10, E:I.13, E:Y.19, E:I.27, E:L.30, F:V.23, F:A.27, F:V.28, F:I.31
- Salt bridges: E:R.8, E:R.18, F:R.19
- pi-Stacking: E:Y.19, E:H.23, F:W.20
- Metal complexes: E:H.23, F:H.24
HEM.190: 17 residues within 4Å:- Chain U: F.10, I.13, R.18, Y.19, I.22, H.23, T.26, I.27, L.30
- Chain V: I.15, R.19, W.20, V.23, H.24, A.27, V.28, I.31
16 PLIP interactions:7 interactions with chain V, 9 interactions with chain U,- Hydrophobic interactions: V:V.23, V:A.27, V:V.28, V:I.31, U:F.10, U:I.13, U:I.22, U:I.27
- Salt bridges: V:R.19, U:R.8, U:R.18
- pi-Stacking: V:W.20, U:Y.19, U:H.23
- Metal complexes: V:H.24, U:H.23
- 2 x RRX: (3R)-beta,beta-caroten-3-ol(Non-covalent)
RRX.87: 17 residues within 4Å:- Chain G: M.31, F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Chain N: T.2, L.7, F.11
- Ligands: CLA.18, CLA.19, CLA.20, CLA.26, CLA.27
12 PLIP interactions:4 interactions with chain N, 8 interactions with chain G- Hydrophobic interactions: N:L.7, N:F.11, G:F.38, G:F.38, G:F.38, G:F.38, G:V.40, G:F.41, G:I.44, G:L.55
- Hydrogen bonds: N:T.2
- Water bridges: N:T.2
RRX.210: 17 residues within 4Å:- Chain 3: T.2, L.7, F.11
- Chain W: M.31, F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Ligands: CLA.125, CLA.126, CLA.127, CLA.133, CLA.134
11 PLIP interactions:7 interactions with chain W, 4 interactions with chain 3- Hydrophobic interactions: W:F.38, W:F.38, W:F.38, W:V.40, W:F.41, W:I.44, W:L.55, 3:L.7, 3:F.11
- Hydrogen bonds: 3:T.2
- Water bridges: 3:T.2
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhao, Z. et al., Inactive PSII dimer from the Peak4 PSII pool. To Be Published
- Release Date
- 2025-07-30
- Peptides
- Photosystem II protein D1 1: AQ
Photosystem II CP47 reaction center protein: BR
Photosystem II CP43 reaction center protein: CS
Photosystem II D2 protein: DT
Cytochrome b559 subunit alpha: EU
Cytochrome b559 subunit beta: FV
Photosystem II reaction center protein H: GW
Photosystem II reaction center protein I: HX
Photosystem II reaction center protein J: IY
Photosystem II reaction center protein K: JZ
Photosystem II reaction center protein L: K0
Photosystem II reaction center protein M: L1
Photosystem II reaction center protein T: M2
Photosystem II reaction center X protein: N3
Photosystem II reaction center protein Ycf12: O4
Photosystem II reaction center protein Z: P5 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AQ
aB
BR
bC
CS
cD
DT
dE
EU
eF
FV
fG
HW
hH
IX
iI
JY
jJ
KZ
kK
L0
lL
M1
mM
T2
tN
X3
xO
Y4
yP
Z5
z - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 9g6f.1
Inactive PSII dimer from native Peak4 PSII dimers
Photosystem II protein D1 1
Toggle Identical (AQ)Photosystem II CP47 reaction center protein
Photosystem II CP43 reaction center protein
Toggle Identical (CS)Photosystem II D2 protein
Toggle Identical (DT)Cytochrome b559 subunit alpha
Toggle Identical (EU)Cytochrome b559 subunit beta
Toggle Identical (FV)Photosystem II reaction center protein H
Toggle Identical (GW)Photosystem II reaction center protein I
Toggle Identical (HX)Photosystem II reaction center protein J
Toggle Identical (IY)Photosystem II reaction center protein K
Toggle Identical (JZ)Photosystem II reaction center protein L
Toggle Identical (K0)Photosystem II reaction center protein M
Toggle Identical (L1)Photosystem II reaction center protein T
Toggle Identical (M2)Photosystem II reaction center X protein
Toggle Identical (N3)Photosystem II reaction center protein Ycf12
Toggle Identical (O4)Photosystem II reaction center protein Z
Toggle Identical (P5)Related Entries With Identical Sequence
1izl.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1 more...less...5e79.1 | 5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kaf.1 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1 | 9evx.1 | 9g6g.1 | 9g6h.1