- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-2-2-2-2-2-2-2-2-2-2-2-1-2-1-1-2-2-2-1-mer
- Ligands
- 2 x FE2: FE (II) ION(Non-covalent)
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.4: 29 residues within 4Å:- Chain A: F.119, Y.147, P.150, L.151, S.153, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, A.287, I.290
- Chain D: L.182, L.205, F.257
- Ligands: CLA.5, CLA.6, PHO.7, CLA.80
19 PLIP interactions:15 interactions with chain A, 4 interactions with chain D,- Hydrophobic interactions: A:F.119, A:F.186, A:Q.187, A:I.192, A:I.192, A:L.193, A:V.202, A:V.205, A:V.205, A:F.206, A:F.206, A:T.286, D:L.182, D:L.182, D:L.205, D:F.257
- Hydrogen bonds: A:S.153
- pi-Cation interactions: A:H.198
- Metal complexes: A:H.198
CLA.5: 25 residues within 4Å:- Chain A: T.45, F.48, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain D: M.198, V.201, A.202, L.205, G.206
- Chain K: L.30
- Chain N: F.10, I.14
- Ligands: CLA.4, PHO.7, SQD.11, PL9.78, CLA.80, LHG.83, LHG.113
9 PLIP interactions:5 interactions with chain A, 2 interactions with chain N, 1 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: A:F.48, A:V.157, A:F.158, A:F.180, A:F.182, N:F.10, N:I.14, D:V.201
- Metal complexes: H2O.3
CLA.6: 19 residues within 4Å:- Chain A: Q.199, V.202, A.203, F.206, G.207, L.210, W.278
- Chain D: F.157, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.4, PL9.10, DGD.54, PHO.77, CLA.80, LMG.85
13 PLIP interactions:4 interactions with chain A, 8 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: A:V.202, A:L.210, A:W.278, D:F.157, D:F.157, D:I.178, D:I.178, D:F.179, D:F.181, D:L.182, D:L.182
- pi-Stacking: A:F.206
- Metal complexes: H2O.4
CLA.8: 27 residues within 4Å:- Chain A: I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, Q.113, L.114, F.117, H.118, L.121
- Chain H: V.8, Y.9, V.11, V.12, T.13, F.15, V.16, V.20
- Ligands: BCR.9, LMT.16, CLA.59, CLA.60, LFA.105, LMG.107
20 PLIP interactions:13 interactions with chain A, 7 interactions with chain H,- Hydrophobic interactions: A:P.39, A:T.40, A:F.93, A:P.95, A:I.96, A:W.97, A:W.97, A:L.114, A:F.117, A:L.121, H:Y.9, H:V.11, H:V.12, H:F.15, H:F.15, H:V.16, H:V.20
- Hydrogen bonds: A:I.96
- Salt bridges: A:H.118
- Metal complexes: A:H.118
CLA.19: 12 residues within 4Å:- Chain B: W.185, G.186, P.187, F.190, V.208
- Chain G: F.41, I.44, I.48, L.55
- Ligands: CLA.20, PLM.42, RRX.103
10 PLIP interactions:4 interactions with chain G, 5 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: G:F.41, G:F.41, G:I.48, G:L.55, B:W.185, B:P.187, B:F.190, B:F.190, B:V.208
- Metal complexes: H2O.6
CLA.20: 29 residues within 4Å:- Chain B: G.189, F.190, P.192, G.197, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250, V.251, T.255
- Chain D: V.154, I.159, L.162
- Chain G: F.38, F.41, I.45, L.46, Y.49
- Ligands: CLA.19, CLA.21, CLA.23, CLA.26, CLA.27, DGD.102, RRX.103
21 PLIP interactions:3 interactions with chain D, 12 interactions with chain B, 6 interactions with chain G,- Hydrophobic interactions: D:V.154, D:I.159, D:L.162, B:F.190, B:F.190, B:P.192, B:A.200, B:H.201, B:V.208, B:F.246, B:F.247, B:F.247, B:F.250, G:F.38, G:F.41, G:I.45, G:I.45, G:I.45
- pi-Stacking: B:H.201, G:F.41
- Metal complexes: B:H.201
CLA.21: 26 residues within 4Å:- Chain B: R.68, L.69, A.146, L.149, C.150, F.153, L.158, V.198, H.201, H.202, A.244, F.247, A.248, V.251, V.252, T.262
- Chain G: M.35, F.38
- Ligands: CLA.20, CLA.22, CLA.23, CLA.24, CLA.26, CLA.27, CLA.28, RRX.103
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:L.69, B:L.149, B:L.149, B:F.153, B:F.153, B:F.153, B:A.244, B:A.248, B:V.251
- Hydrogen bonds: B:R.68
- Salt bridges: B:R.68
- pi-Stacking: B:H.202
- pi-Cation interactions: B:H.201
- Metal complexes: B:H.202
CLA.22: 24 residues within 4Å:- Chain B: W.33, F.61, F.65, R.68, L.145, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.21, CLA.23, CLA.24, CLA.25, CLA.29, CLA.30, CLA.31, CLA.33, BCR.35
20 PLIP interactions:20 interactions with chain B,- Hydrophobic interactions: B:W.33, B:F.61, B:F.65, B:F.65, B:L.145, B:L.149, B:L.149, B:V.245, B:A.248, B:A.249, B:V.252, B:F.451, B:F.458, B:F.458, B:F.462, B:F.462
- Salt bridges: B:R.68
- pi-Stacking: B:F.451, B:H.455
- Metal complexes: B:H.455
CLA.23: 30 residues within 4Å:- Chain B: T.27, V.30, A.31, W.33, A.34, A.38, V.62, F.65, M.66, R.68, L.69, V.96, H.100, L.103, L.143, A.146, G.147, C.150, A.205, G.209
- Ligands: CLA.20, CLA.21, CLA.22, CLA.24, CLA.27, CLA.28, CLA.30, CLA.33, BCR.36, LFA.40
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:T.27, B:V.30, B:A.31, B:W.33, B:A.34, B:L.69, B:V.96, B:L.103, B:A.146
- Hydrogen bonds: B:M.66
- Salt bridges: B:R.68
- Metal complexes: B:H.100
CLA.24: 22 residues within 4Å:- Chain B: L.69, G.70, V.71, F.90, W.91, V.96, A.99, H.100, L.103, L.106, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.21, CLA.22, CLA.23, BCR.36, LFA.40
17 PLIP interactions:17 interactions with chain B,- Hydrophobic interactions: B:L.69, B:L.69, B:V.71, B:F.90, B:F.90, B:W.91, B:W.91, B:W.91, B:A.99, B:L.103, B:L.106, B:F.156, B:F.162, B:F.162
- pi-Stacking: B:H.157
- pi-Cation interactions: B:H.157
- Metal complexes: B:H.157
CLA.25: 28 residues within 4Å:- Chain B: W.33, M.37, Y.40, Q.58, G.59, F.61, L.324, F.325, T.327, G.328, P.329, P.447, W.450, F.451, A.454, H.455
- Chain D: T.277, M.281
- Chain K: F.31, F.35
- Chain L: F.14
- Ligands: CLA.22, CLA.31, BCR.35, LMG.37, BCR.49, LHG.82, BCR.223
14 PLIP interactions:9 interactions with chain B, 1 interactions with chain L, 2 interactions with chain K, 1 interactions with chain D, 1 Ligand-Water interactions,- Hydrophobic interactions: B:Y.40, B:F.61, B:F.61, B:F.325, B:P.447, B:W.450, B:W.450, L:F.14, K:F.31, K:F.35, D:T.277
- Hydrogen bonds: B:G.328
- pi-Stacking: B:F.61
- Metal complexes: H2O.10
CLA.26: 29 residues within 4Å:- Chain B: L.229, T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, G.470, T.473, L.474
- Chain D: L.89, F.120, I.123, M.126, L.127, F.130, I.150
- Chain G: L.39
- Ligands: CLA.20, CLA.21, CLA.27, CLA.28, CLA.81, SQD.86, LFA.88, DGD.102
21 PLIP interactions:10 interactions with chain B, 10 interactions with chain D, 1 interactions with chain G,- Hydrophobic interactions: B:A.243, B:F.246, B:F.247, B:F.463, B:F.463, B:I.467, B:L.474, D:L.89, D:F.120, D:F.120, D:F.120, D:I.123, D:I.123, D:M.126, D:L.127, D:F.130, D:I.150, G:L.39
- Hydrogen bonds: B:S.239
- Salt bridges: B:H.466
- Metal complexes: B:H.466
CLA.27: 26 residues within 4Å:- Chain B: F.139, V.208, A.212, F.215, H.216, V.219, P.221, P.222, L.225, L.229, M.231
- Chain D: F.120
- Chain G: T.27, T.28, M.31, F.34, M.35, L.39, L.42
- Ligands: CLA.20, CLA.21, CLA.23, CLA.26, CLA.28, SQD.86, RRX.103
15 PLIP interactions:4 interactions with chain G, 10 interactions with chain B, 1 interactions with chain D,- Hydrophobic interactions: G:M.31, G:F.34, G:L.39, G:L.42, B:F.139, B:F.139, B:V.208, B:A.212, B:F.215, B:F.215, B:L.225, B:L.229, D:F.120
- Salt bridges: B:H.216
- Metal complexes: B:H.216
CLA.28: 23 residues within 4Å:- Chain B: L.19, H.23, L.135, M.138, F.139, H.142, L.143, A.146, L.229, M.231, I.234, T.236, V.237, S.240, S.241, A.244
- Ligands: CLA.21, CLA.23, CLA.26, CLA.27, CLA.30, CLA.33, RRX.103
12 PLIP interactions:11 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:L.19, B:L.135, B:M.138, B:F.139, B:F.139, B:L.229, B:M.231, B:I.234, B:T.236, B:V.237
- Hydrogen bonds: B:H.142
- Metal complexes: H2O.5
CLA.29: 24 residues within 4Å:- Chain B: W.5, Y.6, R.7, V.8, H.9, T.10, L.238, I.242, F.458, L.461, F.462, F.464, G.465, W.468, H.469, R.472, F.479
- Ligands: CLA.22, CLA.30, CLA.31, CLA.32, BCR.35, LHG.82, LHG.113
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:W.5, B:H.9, B:T.10, B:L.238, B:L.238, B:I.242, B:F.458, B:F.462, B:F.464
- Hydrogen bonds: B:H.9
- Salt bridges: B:H.9, B:R.472
- pi-Stacking: B:W.468, B:H.469, B:H.469
- Metal complexes: B:H.469
CLA.30: 21 residues within 4Å:- Chain B: H.9, L.12, I.13, L.19, H.23, H.26, T.27, I.234, E.235, V.237, L.238, S.241, I.242, V.245
- Ligands: CLA.22, CLA.23, CLA.28, CLA.29, CLA.31, CLA.32, CLA.33
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:H.9, B:L.12, B:L.12, B:I.13, B:L.19, B:H.26, B:I.234, B:I.234, B:E.235, B:V.237, B:L.238, B:L.238, B:V.245
- Hydrogen bonds: B:S.241
- Salt bridges: B:H.23
- Metal complexes: B:H.23
CLA.31: 15 residues within 4Å:- Chain B: H.9, H.26, V.30, W.33, L.461, F.462
- Ligands: CLA.22, CLA.25, CLA.29, CLA.30, CLA.32, BCR.35, LMG.37, LHG.82, BCR.223
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:V.30, B:V.30, B:W.33, B:W.33, B:L.461, B:F.462, B:F.462
- Salt bridges: B:H.9, B:H.9
- pi-Stacking: B:H.26, B:H.26
- Metal complexes: B:H.26
CLA.32: 23 residues within 4Å:- Chain 5: F.8
- Chain B: L.3, V.8, H.9, V.11, L.12, A.22, M.25, L.29, W.115
- Chain K: Q.8, V.10
- Chain L: F.21, L.25
- Ligands: CLA.29, CLA.30, CLA.31, LMG.37, SQD.48, LHG.113, LMT.115, LFA.222, BCR.223
12 PLIP interactions:2 interactions with chain 5, 8 interactions with chain B, 2 interactions with chain L,- Hydrophobic interactions: 5:F.8, 5:F.8, B:V.8, B:L.12, B:M.25, B:L.29, B:W.115, B:W.115, L:F.21, L:L.25
- pi-Stacking: B:H.9
- Metal complexes: B:H.9
CLA.33: 20 residues within 4Å:- Chain B: I.20, H.23, L.24, T.27, L.133, M.138, I.141, H.142, L.145
- Chain G: L.7, L.11, L.14, N.15
- Ligands: CLA.22, CLA.23, CLA.28, CLA.30, CLA.34, BCR.36, LFA.45
11 PLIP interactions:6 interactions with chain B, 5 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.133, B:L.133, B:I.141, B:L.145, G:L.11, G:L.11, G:L.14, G:L.14, G:N.15
- Metal complexes: B:H.142
CLA.34: 15 residues within 4Å:- Chain B: I.20, L.24, L.107, A.110, W.113, H.114, L.120, L.122, F.123
- Chain G: T.5, L.7, G.8, L.11
- Ligands: CLA.33, BCR.36
14 PLIP interactions:11 interactions with chain B, 3 interactions with chain G,- Hydrophobic interactions: B:I.20, B:L.24, B:L.107, B:W.113, B:W.113, B:L.120, B:L.122, B:F.123, G:L.7, G:L.11
- pi-Stacking: B:W.113, B:H.114
- Metal complexes: B:H.114
- Water bridges: G:L.7
CLA.55: 23 residues within 4Å:- Chain C: T.82, L.83, L.156, G.159, A.160, L.163, W.211, I.212, V.221, H.225, I.228, A.266, M.269, M.270, I.273, F.277, V.284, Y.285
- Ligands: BCR.51, CLA.56, CLA.57, CLA.60, CLA.61
14 PLIP interactions:14 interactions with chain C,- Hydrophobic interactions: C:L.156, C:A.160, C:L.163, C:L.163, C:W.211, C:I.212, C:I.228, C:A.266, C:M.270, C:I.273, C:F.277, C:V.284
- pi-Stacking: C:H.225
- Metal complexes: C:H.225
CLA.56: 25 residues within 4Å:- Chain C: W.51, I.75, L.76, H.79, L.83, L.162, K.166, F.170, L.267, M.270, A.274, V.278, Y.285, L.414, H.418, L.421, A.422, F.425
- Ligands: CLA.55, CLA.57, CLA.58, CLA.64, CLA.66, PLM.73, LMG.121
20 PLIP interactions:20 interactions with chain C,- Hydrophobic interactions: C:W.51, C:W.51, C:I.75, C:L.76, C:L.83, C:L.162, C:F.170, C:F.170, C:L.267, C:M.270, C:A.274, C:L.414, C:L.421, C:L.421, C:F.425
- Hydrogen bonds: C:Y.285
- Salt bridges: C:H.79, C:H.418
- pi-Cation interactions: C:H.418
- Metal complexes: C:H.418
CLA.57: 20 residues within 4Å:- Chain C: I.48, V.49, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106, M.270
- Ligands: CLA.55, CLA.56, CLA.61, CLA.63, CLA.64, CLA.66, CLA.67, LMG.74
9 PLIP interactions:9 interactions with chain C,- Hydrophobic interactions: C:I.48, C:V.49, C:A.52, C:L.83, C:W.85, C:V.102
- pi-Stacking: C:H.106, C:H.106
- Metal complexes: C:H.106
CLA.58: 23 residues within 4Å:- Chain A: F.197, F.285
- Chain C: W.51, M.55, F.58, Q.72, G.73, I.75, L.392, S.394, W.413, S.417, H.418, V.420, F.424
- Chain J: P.26, V.30
- Ligands: DGD.53, DGD.54, CLA.56, CLA.64, LHG.84, LMG.121
15 PLIP interactions:1 interactions with chain J, 11 interactions with chain C, 2 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: J:V.30, C:W.51, C:F.58, C:I.75, C:W.413, C:W.413, C:W.413, C:W.413, C:V.420, C:F.424, C:F.424, A:F.197, A:F.285
- Hydrogen bonds: C:S.394
- Metal complexes: H2O.14
CLA.59: 24 residues within 4Å:- Chain A: F.33, L.121, S.124, C.125, M.127, G.128, W.131
- Chain C: F.252, S.261, Y.262, G.265, M.269, L.426, H.429, L.430, A.433, R.437
- Chain H: V.12, V.16, F.23
- Ligands: CLA.8, BCR.51, CLA.61, LMG.107
14 PLIP interactions:7 interactions with chain C, 6 interactions with chain A, 1 interactions with chain H,- Hydrophobic interactions: C:Y.262, C:Y.262, C:L.426, C:L.430, A:F.33, A:L.121, A:L.121, A:W.131, A:W.131, A:W.131, H:F.23
- Salt bridges: C:R.437
- pi-Stacking: C:H.429
- Metal complexes: C:H.429
CLA.60: 20 residues within 4Å:- Chain C: L.149, L.153, L.201, W.211, I.231, C.232, G.235, W.238, H.239, T.243, P.244, F.245, W.247, A.248, F.252
- Ligands: CLA.8, LMT.16, BCR.51, CLA.55, CLA.61
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:L.149, C:L.149, C:L.153, C:L.153, C:W.211, C:W.238, C:W.247, C:A.248, C:F.252
- Hydrogen bonds: C:F.245
- Salt bridges: C:H.239
- pi-Stacking: C:H.239
- Metal complexes: C:H.239
CLA.61: 22 residues within 4Å:- Chain C: M.145, T.146, L.149, H.152, L.153, L.156, C.232, W.247, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: BCR.51, CLA.55, CLA.57, CLA.59, CLA.60, CLA.63
18 PLIP interactions:17 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:M.145, C:T.146, C:L.149, C:L.149, C:L.156, C:W.247, C:F.252, C:F.252, C:W.254, C:Y.259, C:Y.259, C:Y.262, C:Y.262, C:Y.262, C:A.266, C:L.267
- Salt bridges: C:H.152
- Metal complexes: H2O.10
CLA.62: 21 residues within 4Å:- Chain C: F.21, W.24, A.25, G.26, N.27, A.28, L.260, L.264, F.424, F.425, G.428, W.431, H.432, R.435
- Chain J: V.30
- Ligands: SQD.15, DGD.53, CLA.63, CLA.64, CLA.65, LHG.84
15 PLIP interactions:1 interactions with chain J, 14 interactions with chain C,- Hydrophobic interactions: J:V.30, C:N.27, C:A.28, C:L.260, C:L.264, C:F.425, C:F.425, C:W.431, C:W.431
- Hydrogen bonds: C:N.27
- Salt bridges: C:H.432, C:R.435
- pi-Stacking: C:W.431, C:H.432
- Metal complexes: C:H.432
CLA.63: 24 residues within 4Å:- Chain C: N.27, L.30, I.31, L.37, A.40, H.41, H.44, I.48, Y.137, W.139, I.148, G.256, E.257, Y.259, L.260, S.263, L.264, L.267
- Ligands: CLA.57, CLA.61, CLA.62, CLA.64, CLA.65, CLA.66
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:N.27, C:L.30, C:L.37, C:A.40, C:H.44, C:W.139, C:W.139, C:W.139, C:I.148, C:Y.259
- Hydrogen bonds: C:S.263
- Metal complexes: C:H.41
CLA.64: 18 residues within 4Å:- Chain C: N.27, H.44, L.47, I.48, W.51, L.267, L.421, F.424, F.425
- Chain J: P.29, V.30, L.33
- Ligands: CLA.56, CLA.57, CLA.58, CLA.62, CLA.63, CLA.65
13 PLIP interactions:3 interactions with chain J, 10 interactions with chain C,- Hydrophobic interactions: J:P.29, J:V.30, J:L.33, C:L.47, C:I.48, C:W.51, C:L.267, C:L.421, C:F.424, C:F.425, C:F.425
- Hydrogen bonds: C:N.27
- Metal complexes: C:H.44
CLA.65: 36 residues within 4Å:- Chain C: T.12, N.13, R.14, W.23, G.26, N.27, R.29, L.30, L.33, K.36, A.40, L.47, A.111, G.114, F.115, V.118, A.121, I.122
- Chain J: F.32, L.33, A.36, W.39, Q.40
- Chain R: I.36, L.39, N.45, L.46
- Chain S: V.20, V.23, P.24, A.28
- Ligands: BCR.50, CLA.62, CLA.63, CLA.64, BCR.122
22 PLIP interactions:1 interactions with chain R, 4 interactions with chain S, 8 interactions with chain C, 9 interactions with chain J,- Hydrophobic interactions: R:I.36, S:V.20, S:V.23, S:P.24, S:A.28, C:L.30, C:L.30, C:L.47, C:F.115, C:V.118, C:A.121, J:F.32, J:F.32, J:L.33, J:A.36, J:W.39, J:W.39
- Hydrogen bonds: C:R.29
- Salt bridges: C:R.14
- pi-Stacking: J:W.39, J:W.39, J:W.39
CLA.66: 21 residues within 4Å:- Chain C: H.41, A.45, L.113, L.128, F.134, F.135, Y.137, I.148, F.151, H.152, I.154, V.155, I.158, G.159, L.162
- Ligands: CLA.56, CLA.57, CLA.63, CLA.67, PLM.71, BCR.76
17 PLIP interactions:17 interactions with chain C,- Hydrophobic interactions: C:H.41, C:L.128, C:F.134, C:Y.137, C:Y.137, C:I.148, C:I.148, C:F.151, C:I.154, C:V.155, C:I.158, C:L.162
- Water bridges: C:A.45
- pi-Stacking: C:H.152, C:H.152
- pi-Cation interactions: C:H.152
- Metal complexes: C:H.152
CLA.67: 18 residues within 4Å:- Chain C: L.38, V.42, V.112, L.113, G.116, Y.119, H.120, P.125, L.128, Y.131, F.135
- Ligands: CLA.57, CLA.66, PLM.68, PLM.71, LMG.74, LMT.75, BCR.76
16 PLIP interactions:16 interactions with chain C,- Hydrophobic interactions: C:L.38, C:L.38, C:V.42, C:V.42, C:V.112, C:L.113, C:Y.119, C:L.128, C:Y.131, C:F.135, C:F.135
- Salt bridges: C:H.120
- pi-Stacking: C:H.120, C:H.120, C:F.135
- Metal complexes: C:H.120
CLA.80: 28 residues within 4Å:- Chain A: M.183, F.206
- Chain D: L.45, P.149, V.152, F.153, S.155, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, S.282, A.283, V.286
- Ligands: CLA.4, CLA.5, CLA.6, PL9.10, PHO.77, LMG.85
14 PLIP interactions:13 interactions with chain D, 1 interactions with chain A,- Hydrophobic interactions: D:L.45, D:V.152, D:F.153, D:F.181, D:F.185, D:Q.186, D:V.201, D:V.204, D:V.204, D:L.205, A:F.206
- pi-Stacking: D:W.191, D:H.197
- Metal complexes: D:H.197
CLA.81: 28 residues within 4Å:- Chain D: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, T.112, F.113, L.116, H.117, F.120
- Chain G: V.40, L.43
- Chain Q: F.11, G.13, L.14, G.17, A.18, V.20
- Ligands: CLA.26, DGD.87, PLM.90, SQD.101
18 PLIP interactions:14 interactions with chain D, 2 interactions with chain G, 2 interactions with chain Q,- Hydrophobic interactions: D:L.36, D:P.39, D:L.43, D:W.93, D:W.93, D:W.93, D:F.113, D:L.116, D:F.120, G:V.40, G:L.43, Q:F.11, Q:V.20
- Hydrogen bonds: D:L.92
- Salt bridges: D:H.117
- pi-Stacking: D:F.113, D:H.117
- Metal complexes: D:H.117
CLA.124: 30 residues within 4Å:- Chain 5: F.17
- Chain T: F.119, Y.147, P.150, S.153, V.157, F.182, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, V.205, F.206, V.283, T.286, A.287, I.290
- Chain W: L.182, L.205, F.257
- Ligands: CLA.125, PHO.126, CLA.192, CLA.195, LHG.201
20 PLIP interactions:15 interactions with chain T, 1 interactions with chain 5, 4 interactions with chain W,- Hydrophobic interactions: T:F.119, T:F.186, T:Q.187, T:I.192, T:I.192, T:L.193, T:V.202, T:V.205, T:F.206, T:F.206, T:T.286, T:I.290, 5:F.17, W:L.182, W:L.182, W:L.205, W:F.257
- Hydrogen bonds: T:S.153
- Water bridges: T:I.290
- Metal complexes: T:H.198
CLA.125: 19 residues within 4Å:- Chain T: Q.199, V.202, A.203, F.206, G.207, L.210, W.278
- Chain W: F.157, V.175, I.178, F.179, F.181, L.182
- Ligands: CLA.124, PL9.131, DGD.185, PHO.193, CLA.195, LMG.202
11 PLIP interactions:7 interactions with chain W, 3 interactions with chain T, 1 Ligand-Water interactions,- Hydrophobic interactions: W:F.157, W:I.178, W:I.178, W:F.179, W:F.181, W:L.182, W:L.182, T:V.202, T:L.210, T:W.278
- Metal complexes: H2O.27
CLA.127: 28 residues within 4Å:- Chain 0: V.8, Y.9, V.11, V.12, T.13, F.15, V.16, F.19, V.20
- Chain T: V.35, I.36, P.39, T.40, F.93, Y.94, P.95, I.96, W.97, L.114, F.117, H.118, L.121
- Ligands: BCR.128, LMG.130, CLA.174, CLA.175, DGD.183, BCR.215
19 PLIP interactions:13 interactions with chain T, 6 interactions with chain 0,- Hydrophobic interactions: T:P.39, T:T.40, T:F.93, T:P.95, T:I.96, T:W.97, T:W.97, T:L.114, T:F.117, T:L.121, 0:V.12, 0:F.15, 0:F.15, 0:V.16, 0:F.19, 0:V.20
- Hydrogen bonds: T:I.96
- Salt bridges: T:H.118
- Metal complexes: T:H.118
CLA.143: 11 residues within 4Å:- Chain U: W.185, G.186, P.187, F.190
- Chain Z: F.41, I.44, I.48, L.55
- Ligands: CLA.144, PLM.169, RRX.225
10 PLIP interactions:5 interactions with chain Z, 4 interactions with chain U, 1 Ligand-Water interactions,- Hydrophobic interactions: Z:F.41, Z:F.41, Z:I.44, Z:I.48, Z:L.55, U:W.185, U:P.187, U:F.190, U:F.190
- Metal complexes: H2O.28
CLA.144: 29 residues within 4Å:- Chain U: G.189, F.190, P.192, G.197, A.200, H.201, A.204, A.205, V.208, F.246, F.247, F.250, V.251, T.255
- Chain W: V.154, L.158, I.159, L.162
- Chain Z: F.38, F.41, I.45, L.46, Y.49
- Ligands: CLA.143, CLA.145, CLA.147, CLA.151, DGD.211, RRX.225
24 PLIP interactions:4 interactions with chain W, 14 interactions with chain U, 6 interactions with chain Z,- Hydrophobic interactions: W:V.154, W:L.158, W:I.159, W:L.162, U:F.190, U:F.190, U:P.192, U:A.200, U:H.201, U:A.205, U:V.208, U:V.208, U:F.246, U:F.247, U:F.250, U:F.250, Z:F.38, Z:F.41, Z:I.45, Z:I.45, Z:I.45, Z:L.46
- pi-Stacking: U:H.201
- Metal complexes: U:H.201
CLA.145: 26 residues within 4Å:- Chain U: R.68, L.69, A.146, L.149, C.150, F.153, L.158, V.198, H.201, H.202, F.247, A.248, V.251, V.252, T.262
- Chain Z: M.35, F.38, L.39
- Ligands: CLA.144, CLA.146, CLA.147, CLA.148, CLA.150, CLA.151, CLA.152, RRX.225
13 PLIP interactions:12 interactions with chain U, 1 interactions with chain Z,- Hydrophobic interactions: U:L.69, U:L.149, U:L.149, U:F.153, U:F.153, U:A.248, U:V.251, Z:L.39
- Hydrogen bonds: U:R.68
- Salt bridges: U:R.68
- pi-Stacking: U:H.202
- pi-Cation interactions: U:H.201
- Metal complexes: U:H.202
CLA.146: 25 residues within 4Å:- Chain U: W.33, F.61, F.65, R.68, L.145, L.148, L.149, V.245, A.248, A.249, V.252, F.451, H.455, F.458, A.459, F.462
- Ligands: CLA.145, CLA.147, CLA.148, CLA.149, CLA.153, CLA.154, CLA.155, CLA.157, BCR.160
21 PLIP interactions:21 interactions with chain U,- Hydrophobic interactions: U:W.33, U:F.61, U:F.65, U:F.65, U:L.145, U:L.148, U:V.245, U:A.248, U:A.249, U:V.252, U:F.458, U:F.458, U:F.462, U:F.462
- Salt bridges: U:R.68
- pi-Stacking: U:F.451, U:F.451, U:H.455, U:H.455
- pi-Cation interactions: U:H.455
- Metal complexes: U:H.455
CLA.147: 28 residues within 4Å:- Chain U: T.27, V.30, A.31, W.33, A.34, A.38, V.62, F.65, M.66, R.68, L.69, V.96, H.100, L.103, A.146, G.147, C.150, A.205, G.209
- Ligands: CLA.144, CLA.145, CLA.146, CLA.148, CLA.151, CLA.152, CLA.154, CLA.157, BCR.161
13 PLIP interactions:13 interactions with chain U,- Hydrophobic interactions: U:T.27, U:V.30, U:A.31, U:W.33, U:A.34, U:L.69, U:V.96, U:L.103, U:A.146
- Hydrogen bonds: U:M.66
- Salt bridges: U:R.68
- pi-Cation interactions: U:H.100
- Metal complexes: U:H.100
CLA.148: 24 residues within 4Å:- Chain U: L.69, G.70, V.71, F.90, W.91, V.96, A.99, H.100, V.102, L.103, L.106, L.149, G.152, F.153, F.156, H.157, F.162, G.163, P.164
- Ligands: CLA.145, CLA.146, CLA.147, BCR.161, PLM.163
18 PLIP interactions:18 interactions with chain U,- Hydrophobic interactions: U:L.69, U:L.69, U:V.71, U:F.90, U:F.90, U:W.91, U:W.91, U:W.91, U:A.99, U:V.102, U:L.103, U:L.106, U:L.149, U:F.156, U:F.162, U:F.162
- pi-Cation interactions: U:H.157
- Metal complexes: U:H.157
CLA.149: 30 residues within 4Å:- Chain 3: L.27, F.31, F.35
- Chain 4: F.14
- Chain U: W.33, M.37, Y.40, Q.58, G.59, F.61, L.324, F.325, T.327, G.328, P.329, P.447, W.450, F.451, A.454, H.455
- Chain W: F.196, M.281
- Ligands: BCR.117, CLA.146, CLA.155, BCR.159, BCR.160, LMG.162, PL9.197, LHG.200
16 PLIP interactions:1 interactions with chain 4, 10 interactions with chain U, 3 interactions with chain 3, 1 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: 4:F.14, U:Y.40, U:F.61, U:F.61, U:F.325, U:T.327, U:P.447, U:W.450, U:W.450, 3:L.27, 3:F.31, 3:F.35, W:F.196
- Hydrogen bonds: U:G.328
- pi-Stacking: U:F.61
- Metal complexes: H2O.31
CLA.150: 28 residues within 4Å:- Chain U: L.229, T.236, S.239, S.240, A.243, F.246, F.247, F.463, H.466, I.467, G.470, T.473, L.474
- Chain W: F.120, I.123, M.126, L.127, F.130, I.150
- Chain Z: L.39, L.43, L.46
- Ligands: CLA.145, CLA.151, CLA.152, PLM.164, CLA.196, DGD.211
23 PLIP interactions:8 interactions with chain W, 12 interactions with chain U, 3 interactions with chain Z,- Hydrophobic interactions: W:F.120, W:F.120, W:F.120, W:I.123, W:M.126, W:L.127, W:F.130, W:I.150, U:A.243, U:F.246, U:F.247, U:F.463, U:F.463, U:I.467, U:L.474, Z:L.39, Z:L.43, Z:L.46
- Hydrogen bonds: U:S.239
- Water bridges: U:S.240
- pi-Stacking: U:H.466, U:H.466
- Metal complexes: U:H.466
CLA.151: 27 residues within 4Å:- Chain U: F.139, V.208, A.212, F.215, H.216, V.219, R.220, P.221, P.222, L.225, L.229, M.231
- Chain W: F.120
- Chain Z: T.27, T.28, M.31, F.34, M.35, L.39, L.42
- Ligands: CLA.144, CLA.145, CLA.147, CLA.150, CLA.152, PLM.164, RRX.225
16 PLIP interactions:11 interactions with chain U, 4 interactions with chain Z, 1 interactions with chain W,- Hydrophobic interactions: U:F.139, U:F.139, U:F.139, U:V.208, U:A.212, U:F.215, U:F.215, U:L.225, U:L.229, U:L.229, Z:M.31, Z:F.34, Z:L.39, Z:L.42, W:F.120
- Metal complexes: U:H.216
CLA.152: 23 residues within 4Å:- Chain U: L.19, H.23, L.135, M.138, F.139, H.142, L.143, A.146, L.229, M.231, I.234, T.236, V.237, S.240, S.241, A.244
- Ligands: CLA.145, CLA.147, CLA.150, CLA.151, CLA.154, CLA.157, RRX.225
9 PLIP interactions:8 interactions with chain U, 1 Ligand-Water interactions,- Hydrophobic interactions: U:L.19, U:L.135, U:M.138, U:F.139, U:L.229, U:M.231, U:I.234, U:T.236
- Metal complexes: H2O.27
CLA.153: 22 residues within 4Å:- Chain 4: F.21
- Chain U: W.5, Y.6, R.7, V.8, H.9, T.10, L.238, I.242, L.461, F.462, F.464, G.465, W.468, H.469, R.472
- Ligands: CLA.146, CLA.154, CLA.155, CLA.156, LHG.200, LHG.221
16 PLIP interactions:15 interactions with chain U, 1 interactions with chain 4,- Hydrophobic interactions: U:H.9, U:T.10, U:L.238, U:L.238, U:I.242, U:F.462, U:F.462, U:F.464, 4:F.21
- Hydrogen bonds: U:H.9
- Salt bridges: U:H.9, U:R.472
- pi-Stacking: U:W.468, U:H.469, U:H.469
- Metal complexes: U:H.469
CLA.154: 19 residues within 4Å:- Chain U: H.9, L.12, L.19, H.23, H.26, T.27, I.234, V.237, L.238, S.241, I.242, V.245
- Ligands: CLA.146, CLA.147, CLA.152, CLA.153, CLA.155, CLA.156, CLA.157
13 PLIP interactions:13 interactions with chain U,- Hydrophobic interactions: U:L.12, U:L.19, U:H.23, U:H.26, U:I.234, U:V.237, U:L.238, U:L.238, U:V.245
- Hydrogen bonds: U:S.241
- Salt bridges: U:H.23
- pi-Stacking: U:H.23
- Metal complexes: U:H.23
CLA.155: 16 residues within 4Å:- Chain 4: F.14
- Chain U: H.9, H.26, V.30, W.33, L.461, F.462
- Ligands: CLA.146, CLA.149, CLA.153, CLA.154, CLA.156, BCR.159, BCR.160, LMG.162, LHG.200
12 PLIP interactions:11 interactions with chain U, 1 interactions with chain 4,- Hydrophobic interactions: U:V.30, U:V.30, U:W.33, U:W.33, U:L.461, U:F.462, 4:F.14
- Salt bridges: U:H.9, U:H.9
- pi-Stacking: U:H.26, U:H.26
- Metal complexes: U:H.26
CLA.156: 25 residues within 4Å:- Chain 3: Q.8, V.10
- Chain 4: F.21, L.25
- Chain N: F.8
- Chain U: L.3, V.8, H.9, V.11, L.12, A.22, M.25, L.29, W.115
- Ligands: LMT.114, BCR.117, LMT.119, SQD.142, CLA.153, CLA.154, CLA.155, BCR.159, LMG.162, PLM.220, LHG.221
12 PLIP interactions:8 interactions with chain U, 2 interactions with chain 4, 2 interactions with chain N,- Hydrophobic interactions: U:V.8, U:V.8, U:L.12, U:M.25, U:L.29, U:W.115, 4:F.21, 4:L.25, N:F.8, N:F.8
- pi-Stacking: U:H.9
- Metal complexes: U:H.9
CLA.157: 17 residues within 4Å:- Chain U: I.20, H.23, L.24, T.27, L.133, M.138, I.141, H.142, L.145
- Chain Z: L.7, L.14, N.15
- Ligands: CLA.146, CLA.147, CLA.152, CLA.154, CLA.158
7 PLIP interactions:2 interactions with chain Z, 5 interactions with chain U,- Hydrophobic interactions: Z:L.7, Z:L.14, U:I.20, U:L.133, U:I.141, U:L.145
- Metal complexes: U:H.142
CLA.158: 16 residues within 4Å:- Chain U: I.20, L.24, L.107, A.110, W.113, H.114, L.120, L.122
- Chain Z: T.5, L.7, G.8, L.11
- Ligands: SQD.11, CLA.157, BCR.161, PLM.163
12 PLIP interactions:10 interactions with chain U, 2 interactions with chain Z,- Hydrophobic interactions: U:I.20, U:L.24, U:L.107, U:W.113, U:W.113, U:L.120, U:L.122, Z:L.7, Z:L.11
- pi-Stacking: U:W.113, U:H.114
- Metal complexes: U:H.114
CLA.170: 22 residues within 4Å:- Chain V: T.82, L.83, L.156, G.159, A.160, L.163, W.211, I.212, V.221, H.225, I.228, A.266, M.270, I.273, F.277, V.284, Y.285
- Ligands: CLA.171, CLA.172, CLA.175, CLA.176, BCR.215
15 PLIP interactions:15 interactions with chain V,- Hydrophobic interactions: V:A.160, V:L.163, V:L.163, V:W.211, V:I.212, V:I.228, V:A.266, V:M.270, V:I.273, V:F.277, V:V.284, V:V.284
- Hydrogen bonds: V:Y.285
- pi-Stacking: V:H.225
- Metal complexes: V:H.225
CLA.171: 25 residues within 4Å:- Chain V: W.51, I.75, L.76, H.79, L.83, W.85, K.166, F.170, L.267, M.270, A.274, V.278, Y.285, L.414, H.418, L.421, F.425
- Ligands: CLA.170, CLA.172, CLA.173, CLA.178, CLA.179, CLA.181, PLM.191, LMG.226
19 PLIP interactions:19 interactions with chain V,- Hydrophobic interactions: V:W.51, V:W.51, V:I.75, V:L.76, V:L.83, V:W.85, V:K.166, V:F.170, V:L.267, V:M.270, V:A.274, V:L.414, V:L.421, V:F.425
- Hydrogen bonds: V:Y.285
- Salt bridges: V:H.79, V:H.418
- pi-Cation interactions: V:H.418
- Metal complexes: V:H.418
CLA.172: 20 residues within 4Å:- Chain V: I.48, V.49, W.51, A.52, T.56, L.76, H.79, I.80, L.83, W.85, V.102, H.106
- Ligands: CLA.170, CLA.171, CLA.176, CLA.178, CLA.179, CLA.181, CLA.182, LMG.190
9 PLIP interactions:9 interactions with chain V,- Hydrophobic interactions: V:I.48, V:V.49, V:A.52, V:L.83, V:W.85, V:V.102
- pi-Stacking: V:H.106, V:H.106
- Metal complexes: V:H.106
CLA.173: 22 residues within 4Å:- Chain 2: P.26, V.30
- Chain T: F.285
- Chain V: W.51, M.55, F.58, Q.72, G.73, I.75, W.413, L.414, S.417, H.418, V.420, F.424
- Ligands: LHG.138, CLA.171, CLA.177, CLA.179, DGD.184, DGD.185, LMG.226
12 PLIP interactions:7 interactions with chain V, 2 interactions with chain 2, 2 interactions with chain T, 1 Ligand-Water interactions,- Hydrophobic interactions: V:I.75, V:W.413, V:W.413, V:L.414, V:V.420, V:F.424, 2:P.26, 2:V.30, T:F.285, T:F.285
- pi-Stacking: V:W.413
- Metal complexes: H2O.33
CLA.174: 25 residues within 4Å:- Chain 0: V.16, F.19, F.23
- Chain T: F.33, L.121, S.124, C.125, M.127, G.128, W.131
- Chain V: F.252, S.261, Y.262, G.265, A.266, M.269, H.429, L.430, A.433, R.437
- Ligands: CLA.127, LMG.130, CLA.176, DGD.183, BCR.215
16 PLIP interactions:5 interactions with chain T, 8 interactions with chain V, 3 interactions with chain 0,- Hydrophobic interactions: T:F.33, T:L.121, T:W.131, T:W.131, T:W.131, V:Y.262, V:Y.262, V:L.430, 0:V.16, 0:F.19, 0:F.23
- Water bridges: V:I.253, V:R.437
- Salt bridges: V:R.437
- pi-Stacking: V:H.429
- Metal complexes: V:H.429
CLA.175: 20 residues within 4Å:- Chain V: L.149, L.153, L.201, I.231, C.232, G.235, W.238, H.239, T.242, T.243, P.244, F.245, W.247, A.248, F.252
- Ligands: CLA.127, CLA.170, CLA.176, DGD.183, BCR.215
10 PLIP interactions:10 interactions with chain V,- Hydrophobic interactions: V:L.149, V:L.153, V:L.153, V:W.238, V:W.247, V:A.248, V:F.252
- Hydrogen bonds: V:F.245
- pi-Stacking: V:H.239
- Metal complexes: V:H.239
CLA.176: 23 residues within 4Å:- Chain V: M.145, T.146, L.149, H.152, L.153, L.156, I.228, C.232, W.247, F.252, W.254, Y.259, Y.262, S.263, A.266, L.267, M.270
- Ligands: CLA.170, CLA.172, CLA.174, CLA.175, CLA.178, BCR.215
19 PLIP interactions:18 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: V:M.145, V:T.146, V:L.149, V:L.149, V:L.156, V:I.228, V:W.247, V:F.252, V:F.252, V:W.254, V:Y.259, V:Y.259, V:Y.262, V:Y.262, V:Y.262, V:A.266, V:L.267
- Salt bridges: V:H.152
- Metal complexes: H2O.31
CLA.177: 23 residues within 4Å:- Chain 2: V.30
- Chain V: F.21, W.24, A.25, G.26, N.27, A.28, L.260, L.264, F.424, F.425, G.428, W.431, H.432, R.435
- Ligands: LHG.138, CLA.173, CLA.178, CLA.179, CLA.180, DGD.184, DGD.185, LMG.226
15 PLIP interactions:1 interactions with chain 2, 14 interactions with chain V,- Hydrophobic interactions: 2:V.30, V:N.27, V:A.28, V:L.260, V:L.260, V:F.425, V:F.425, V:W.431, V:W.431
- Hydrogen bonds: V:N.27
- Salt bridges: V:H.432, V:R.435
- pi-Stacking: V:W.431, V:H.432
- Metal complexes: V:H.432
CLA.178: 26 residues within 4Å:- Chain V: N.27, L.30, I.31, L.37, A.40, H.41, H.44, Y.137, W.139, I.148, H.152, L.156, G.256, E.257, Y.259, L.260, S.263, L.264, L.267
- Ligands: CLA.171, CLA.172, CLA.176, CLA.177, CLA.179, CLA.180, CLA.181
14 PLIP interactions:14 interactions with chain V,- Hydrophobic interactions: V:N.27, V:L.30, V:I.31, V:L.37, V:A.40, V:H.44, V:W.139, V:W.139, V:W.139, V:I.148, V:L.156, V:Y.259
- Hydrogen bonds: V:S.263
- Metal complexes: V:H.41
CLA.179: 18 residues within 4Å:- Chain 2: P.29, V.30, L.33
- Chain V: N.27, H.44, L.47, I.48, W.51, L.267, F.424, F.425
- Ligands: CLA.171, CLA.172, CLA.173, CLA.177, CLA.178, CLA.180, LMG.226
13 PLIP interactions:10 interactions with chain V, 3 interactions with chain 2,- Hydrophobic interactions: V:L.47, V:I.48, V:W.51, V:L.267, V:F.424, V:F.425, V:F.425, V:F.425, 2:P.29, 2:V.30, 2:L.33
- Hydrogen bonds: V:N.27
- Metal complexes: V:H.44
CLA.180: 34 residues within 4Å:- Chain 2: F.32, L.33, A.36, W.39, Q.40
- Chain 7: L.39, N.45, L.46
- Chain 8: M.19, V.20, V.23, P.24, A.28
- Chain V: N.13, R.14, W.23, G.26, N.27, R.29, L.30, L.33, K.36, A.40, L.47, A.111, G.114, F.115, A.121, I.122
- Ligands: CLA.177, CLA.178, CLA.179, BCR.217, BCR.227
25 PLIP interactions:8 interactions with chain V, 5 interactions with chain 8, 2 interactions with chain 7, 10 interactions with chain 2,- Hydrophobic interactions: V:R.14, V:L.30, V:L.30, V:L.47, V:F.115, V:A.121, 8:V.20, 8:V.23, 8:P.24, 8:P.24, 8:A.28, 7:L.39, 7:L.46, 2:F.32, 2:F.32, 2:L.33, 2:A.36, 2:W.39, 2:W.39, 2:Q.40
- Hydrogen bonds: V:R.29
- Salt bridges: V:R.14
- pi-Stacking: 2:W.39, 2:W.39, 2:W.39
CLA.181: 19 residues within 4Å:- Chain V: L.38, H.41, A.45, L.113, F.134, F.135, Y.137, I.148, F.151, H.152, V.155, I.158, G.159
- Ligands: CLA.171, CLA.172, CLA.178, CLA.182, PLM.187, BCR.218
13 PLIP interactions:13 interactions with chain V,- Hydrophobic interactions: V:L.38, V:H.41, V:F.134, V:F.135, V:Y.137, V:Y.137, V:I.148, V:F.151, V:F.151, V:F.151
- pi-Stacking: V:H.152
- pi-Cation interactions: V:H.152
- Metal complexes: V:H.152
CLA.182: 17 residues within 4Å:- Chain V: L.38, V.42, V.112, L.113, G.116, Y.119, H.120, P.125, L.128, Y.131, F.135
- Ligands: CLA.172, CLA.181, PLM.187, LMG.190, BCR.218, LMT.228
16 PLIP interactions:16 interactions with chain V,- Hydrophobic interactions: V:L.38, V:L.38, V:V.42, V:V.42, V:V.112, V:L.113, V:Y.119, V:L.128, V:Y.131, V:F.135, V:F.135, V:F.135
- Salt bridges: V:H.120
- pi-Stacking: V:H.120, V:F.135
- Metal complexes: V:H.120
CLA.192: 23 residues within 4Å:- Chain 5: F.10
- Chain T: T.45, V.157, F.158, M.172, I.176, T.179, F.180, F.182, M.183
- Chain W: M.198, V.201, A.202, L.205, G.206, L.209
- Ligands: CLA.124, PHO.126, SQD.132, CLA.195, PL9.197, LHG.201, LHG.221
9 PLIP interactions:2 interactions with chain W, 1 interactions with chain 5, 5 interactions with chain T, 1 Ligand-Water interactions,- Hydrophobic interactions: W:V.201, W:L.209, 5:F.10, T:T.45, T:V.157, T:F.158, T:F.180, T:F.182
- Metal complexes: H2O.26
CLA.195: 28 residues within 4Å:- Chain T: M.183, F.206
- Chain W: L.45, W.48, P.149, V.152, F.153, S.155, V.156, F.181, L.182, F.185, Q.186, W.191, T.192, H.197, G.200, V.201, V.204, L.205, S.282, A.283, V.286
- Ligands: CLA.124, CLA.125, PL9.131, CLA.192, PHO.193
17 PLIP interactions:16 interactions with chain W, 1 interactions with chain T,- Hydrophobic interactions: W:L.45, W:W.48, W:V.152, W:F.153, W:F.181, W:F.185, W:Q.186, W:T.192, W:V.201, W:V.201, W:V.204, W:V.204, W:L.205, T:F.206
- pi-Stacking: W:W.191, W:H.197
- Metal complexes: W:H.197
CLA.196: 28 residues within 4Å:- Chain 6: F.11, G.13, L.14, G.17, A.18, V.20
- Chain W: I.35, L.36, P.39, C.40, L.43, L.89, L.90, L.91, L.92, W.93, W.104, G.109, T.112, F.113, L.116, H.117, F.120
- Chain Z: V.40, L.43
- Ligands: PL9.131, CLA.150, PLM.224
23 PLIP interactions:14 interactions with chain W, 7 interactions with chain 6, 2 interactions with chain Z,- Hydrophobic interactions: W:L.36, W:P.39, W:L.43, W:L.92, W:W.93, W:W.93, W:W.93, W:F.113, W:L.116, W:F.120, 6:F.11, 6:F.11, 6:L.14, 6:L.14, 6:L.14, 6:A.18, 6:V.20, Z:V.40, Z:L.43
- Hydrogen bonds: W:L.92
- Salt bridges: W:H.117
- pi-Stacking: W:F.113
- Metal complexes: W:H.117
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.7: 28 residues within 4Å:- Chain A: L.41, A.44, T.45, F.48, I.115, F.119, Y.126, Q.130, A.146, Y.147, P.150, M.172, G.175, P.279, V.280, V.283
- Chain D: L.205, A.208, L.209, A.212, I.213, W.253, F.257
- Ligands: CLA.4, CLA.5, SQD.11, PL9.78, LHG.83
16 PLIP interactions:13 interactions with chain A, 3 interactions with chain D- Hydrophobic interactions: A:L.41, A:A.44, A:F.48, A:I.115, A:F.119, A:Y.126, A:A.146, A:Y.147, A:P.150, A:V.283, D:L.205, D:A.208, D:A.212
- Hydrogen bonds: A:Y.126, A:Q.130
- pi-Stacking: A:Y.147
PHO.77: 33 residues within 4Å:- Chain A: F.206, A.209, L.210, A.213, M.214, F.255, L.258, I.259
- Chain D: L.37, A.41, A.44, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, P.149, F.153, F.173, G.174, V.175, P.275, V.276, L.279
- Ligands: CLA.6, PL9.10, CLA.80
24 PLIP interactions:21 interactions with chain D, 3 interactions with chain A- Hydrophobic interactions: D:A.41, D:A.44, D:L.45, D:W.48, D:W.48, D:W.48, D:I.114, D:L.122, D:F.125, D:F.125, D:A.145, D:F.146, D:F.146, D:P.149, D:F.153, D:F.173, D:V.175, D:P.275, D:L.279, A:F.206, A:A.209, A:A.213
- Hydrogen bonds: D:N.142
- pi-Stacking: D:F.146
PHO.126: 28 residues within 4Å:- Chain T: L.41, A.44, T.45, F.48, I.115, F.119, Y.126, Q.130, A.146, Y.147, P.150, F.158, M.172, G.175, P.279, V.280, V.283
- Chain W: L.205, A.208, L.209, I.213, W.253, F.257
- Ligands: CLA.124, SQD.132, CLA.192, PL9.197, LHG.201
16 PLIP interactions:13 interactions with chain T, 3 interactions with chain W- Hydrophobic interactions: T:L.41, T:A.44, T:F.48, T:I.115, T:F.119, T:Y.126, T:A.146, T:Y.147, T:Y.147, T:P.150, T:F.158, W:L.205, W:A.208, W:I.213
- Hydrogen bonds: T:Y.126, T:Q.130
PHO.193: 33 residues within 4Å:- Chain T: F.206, A.209, L.210, M.214, F.255, L.258, I.259
- Chain W: L.37, A.41, A.44, L.45, W.48, I.114, G.118, G.121, L.122, F.125, Q.129, N.142, A.145, F.146, P.149, F.153, F.173, G.174, V.175, P.275, V.276, L.279
- Ligands: CLA.125, PL9.131, LHG.139, CLA.195
24 PLIP interactions:21 interactions with chain W, 3 interactions with chain T- Hydrophobic interactions: W:A.41, W:L.45, W:W.48, W:W.48, W:W.48, W:W.48, W:I.114, W:L.122, W:L.122, W:F.125, W:A.145, W:F.146, W:P.149, W:F.153, W:F.173, W:V.175, W:P.275, W:L.279, W:L.279, T:F.206, T:A.209, T:L.210
- Hydrogen bonds: W:N.142
- pi-Stacking: W:F.146
- 20 x BCR: BETA-CAROTENE(Non-covalent)
BCR.9: 23 residues within 4Å:- Chain A: F.17, V.35, I.38, P.39, L.42, A.43, I.46, C.47, I.50, A.51, A.54, A.55, I.96, L.102, W.105, L.106, P.111
- Chain H: F.15
- Ligands: CLA.8, SQD.11, PLM.18, LFA.105, LFA.109
Ligand excluded by PLIPBCR.35: 14 residues within 4Å:- Chain B: L.29, G.32, W.33, I.101, V.102, S.104, G.105
- Ligands: CLA.22, CLA.25, CLA.29, CLA.31, LMG.37, BCR.49, BCR.223
Ligand excluded by PLIPBCR.36: 16 residues within 4Å:- Chain 5: F.18, F.23
- Chain B: L.103, L.106, L.107, L.109, A.110, W.113, V.116, Y.117
- Ligands: CLA.23, CLA.24, CLA.33, CLA.34, LFA.40, SQD.132
Ligand excluded by PLIPBCR.49: 21 residues within 4Å:- Chain 5: I.4, F.8, A.11, C.12, I.14, F.17, F.18, I.21, F.22
- Chain B: W.33, S.36, M.37, Y.40, L.109
- Chain T: L.28
- Ligands: CLA.25, BCR.35, SQD.48, SQD.132, LMT.141, BCR.223
Ligand excluded by PLIPBCR.50: 22 residues within 4Å:- Chain C: A.43, G.46, L.47, V.104, L.107, I.108, S.110, A.111, G.114, A.121
- Chain J: Y.15, F.18, L.25, F.32, L.35, W.39
- Chain S: L.9, S.16, V.20, W.47
- Ligands: CLA.65, BCR.122
Ligand excluded by PLIPBCR.51: 18 residues within 4Å:- Chain C: I.197, L.201, I.212, V.215, D.220, V.221, G.224, H.225, I.228, F.252, M.269
- Chain H: V.20, F.23, L.24
- Ligands: CLA.55, CLA.59, CLA.60, CLA.61
Ligand excluded by PLIPBCR.76: 17 residues within 4Å:- Chain C: F.100, V.104, I.108, S.109, V.112, L.113, F.135
- Chain J: Y.15
- Chain S: V.54, G.55, N.58, F.59
- Ligands: CLA.66, CLA.67, PLM.68, PLM.71, LMG.74
Ligand excluded by PLIPBCR.79: 16 residues within 4Å:- Chain D: Y.42, L.43, G.46, G.47, L.49, T.50, F.101, L.110, F.113
- Chain F: P.29, T.30, F.33
- Chain I: V.21, V.25
- Ligands: LMG.85, DGD.87
Ligand excluded by PLIPBCR.117: 25 residues within 4Å:- Chain A: L.28
- Chain N: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain U: W.33, S.36, M.37, Y.40, L.109
- Ligands: SQD.11, LHG.83, LMT.118, LMT.119, SQD.142, CLA.149, CLA.156, BCR.159, BCR.160
Ligand excluded by PLIPBCR.122: 26 residues within 4Å:- Chain C: F.50
- Chain I: A.14, T.15, G.18, M.19
- Chain J: L.21, L.25, I.28, L.31, F.32, A.34, L.35, V.38, A.41, F.45
- Chain R: I.28, G.29, G.32, P.33
- Chain S: V.13, S.16, F.17, V.20
- Ligands: BCR.50, CLA.65, PLM.112
Ligand excluded by PLIPBCR.128: 23 residues within 4Å:- Chain 0: F.15
- Chain T: F.17, W.20, V.35, I.38, L.42, A.43, I.46, C.47, I.50, A.51, A.54, A.55, I.96, L.102, W.105, L.106, P.111
- Ligands: PLM.46, CLA.127, PLM.135, PLM.213, LFA.216
Ligand excluded by PLIPBCR.159: 18 residues within 4Å:- Chain 4: A.10, L.13
- Chain N: F.19
- Chain U: M.25, L.29, F.108, A.111, C.112, W.115
- Ligands: BCR.117, LMT.119, SQD.142, CLA.149, CLA.155, CLA.156, BCR.160, LMG.162, LHG.221
Ligand excluded by PLIPBCR.160: 17 residues within 4Å:- Chain U: L.29, G.32, W.33, S.36, I.101, V.102, S.104, G.105, L.109
- Ligands: SQD.11, BCR.117, SQD.142, CLA.146, CLA.149, CLA.155, BCR.159, LMG.162
Ligand excluded by PLIPBCR.161: 16 residues within 4Å:- Chain N: F.18, F.22, F.23
- Chain U: L.103, L.106, L.107, L.109, A.110, W.113, V.116, Y.117
- Ligands: SQD.11, CLA.147, CLA.148, CLA.158, PLM.163
Ligand excluded by PLIPBCR.207: 18 residues within 4Å:- Chain 1: V.21, V.25, F.28
- Chain W: Y.42, L.43, G.46, G.47, L.49, T.50, W.104, L.110, F.113
- Chain Y: P.29, T.30, F.33, L.34, I.37
- Ligands: LMG.202
Ligand excluded by PLIPBCR.215: 20 residues within 4Å:- Chain 0: V.20, F.23, L.24
- Chain V: I.197, Y.200, L.201, I.212, V.215, D.220, V.221, G.224, H.225, I.228, F.252, M.269
- Ligands: CLA.127, CLA.170, CLA.174, CLA.175, CLA.176
Ligand excluded by PLIPBCR.217: 23 residues within 4Å:- Chain 1: A.14, T.15, G.18, M.19
- Chain 2: L.25, I.28, L.31, F.32, A.34, L.35, F.37, V.38, A.41
- Chain 7: I.28, G.29, G.32, P.33
- Chain 8: S.16, F.17
- Chain V: F.50
- Ligands: SQD.129, CLA.180, BCR.227
Ligand excluded by PLIPBCR.218: 17 residues within 4Å:- Chain 2: Y.15
- Chain 8: V.51, V.54, G.55, N.58, F.59
- Chain V: F.100, V.104, I.108, S.109, V.112, L.113, F.135
- Ligands: CLA.181, CLA.182, PLM.187, LMG.190
Ligand excluded by PLIPBCR.223: 16 residues within 4Å:- Chain 5: F.19
- Chain B: M.25, L.29, F.108, A.111, C.112, W.115
- Chain L: A.10, L.13
- Ligands: CLA.25, CLA.31, CLA.32, BCR.35, LMG.37, SQD.48, BCR.49
Ligand excluded by PLIPBCR.227: 23 residues within 4Å:- Chain 2: Y.15, F.18, F.32, L.35, W.39
- Chain 8: L.9, L.12, S.16, V.20
- Chain V: A.43, G.46, L.47, F.50, F.100, V.104, S.110, A.111, G.114, V.118, A.121
- Ligands: CLA.180, BCR.217, LMT.228
Ligand excluded by PLIP- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.10: 32 residues within 4Å:- Chain A: F.211, M.214, H.215, L.218, V.219, Y.246, I.248, A.251, H.252, F.255, A.263, S.264, F.265, L.271, L.275
- Chain D: V.30, G.34, F.38, P.39, A.41, Y.42, L.45
- Chain F: V.18, A.22, T.25, L.26
- Chain Q: T.24
- Ligands: CLA.6, PHO.77, CLA.80, LHG.94, SQD.101
19 PLIP interactions:11 interactions with chain A, 4 interactions with chain D, 3 interactions with chain F, 1 interactions with chain Q- Hydrophobic interactions: A:F.211, A:F.211, A:M.214, A:L.218, A:Y.246, A:H.252, A:F.255, A:L.271, A:L.271, A:L.275, D:V.30, D:P.39, D:A.41, D:L.45, F:V.18, F:A.22, F:L.26, Q:T.24
- Hydrogen bonds: A:F.265
PL9.78: 31 residues within 4Å:- Chain A: F.52, I.77, I.176
- Chain D: M.198, M.199, A.202, G.203, L.209, H.214, T.217, M.246, A.249, N.250, W.253, I.259, A.260, F.261, L.267, F.270, F.273, V.274, G.278
- Chain K: L.23, V.26, L.27, L.29, L.30
- Chain N: F.10
- Ligands: CLA.5, PHO.7, LHG.113
24 PLIP interactions:5 interactions with chain K, 12 interactions with chain D, 3 interactions with chain N, 4 interactions with chain A- Hydrophobic interactions: K:L.23, K:V.26, K:L.27, K:L.29, K:L.30, D:L.209, D:T.217, D:A.249, D:W.253, D:F.261, D:L.267, D:F.270, D:F.273, D:V.274, N:F.10, N:F.10, N:F.10, A:F.52, A:F.52, A:F.52, A:I.176
- Hydrogen bonds: D:T.217, D:F.261
- pi-Stacking: D:F.261
PL9.131: 30 residues within 4Å:- Chain 6: T.24
- Chain T: F.211, M.214, H.215, L.218, I.248, A.251, H.252, F.255, I.259, A.263, S.264, F.265, L.271, L.275
- Chain W: V.30, G.34, F.38, P.39, Y.42, L.45
- Chain Y: A.22, T.25, L.26
- Ligands: CLA.125, LHG.139, PHO.193, CLA.195, CLA.196, SQD.199
18 PLIP interactions:12 interactions with chain T, 5 interactions with chain W, 1 interactions with chain Y- Hydrophobic interactions: T:L.218, T:I.248, T:H.252, T:F.255, T:F.255, T:F.255, T:I.259, T:A.263, T:L.271, T:L.271, T:L.275, W:V.30, W:F.38, W:F.38, W:P.39, W:L.45, Y:L.26
- Hydrogen bonds: T:F.265
PL9.197: 33 residues within 4Å:- Chain 3: L.23, V.26, L.27, L.29
- Chain 5: F.10
- Chain T: F.52, I.53, L.71, I.77
- Chain W: M.198, M.199, A.202, G.203, L.209, H.214, T.217, M.246, A.249, N.250, W.253, F.257, A.260, F.261, L.267, F.270, F.273, V.274, G.278
- Ligands: PHO.126, CLA.149, CLA.192, LHG.201, LHG.221
22 PLIP interactions:12 interactions with chain W, 4 interactions with chain T, 4 interactions with chain 3, 2 interactions with chain 5- Hydrophobic interactions: W:M.199, W:L.209, W:T.217, W:W.253, W:F.257, W:F.261, W:F.261, W:L.267, W:F.270, W:F.273, T:F.52, T:F.52, T:I.53, T:L.71, 3:L.23, 3:V.26, 3:L.27, 3:L.29, 5:F.10, 5:F.10
- Hydrogen bonds: W:T.217, W:F.261
- 9 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.11: 21 residues within 4Å:- Chain A: W.20, N.26, R.27, L.28, V.30, I.38, L.41, T.45, I.46
- Chain N: F.22
- Chain U: L.109, W.113, Y.117
- Ligands: CLA.5, PHO.7, BCR.9, LHG.83, BCR.117, CLA.158, BCR.160, BCR.161
10 PLIP interactions:9 interactions with chain A, 1 interactions with chain U- Hydrophobic interactions: A:N.26, A:V.30, A:I.38, A:I.38, A:L.41, A:T.45, U:L.109
- Hydrogen bonds: A:N.26, A:R.27, A:L.28
SQD.15: 24 residues within 4Å:- Chain A: L.200, A.203, G.204, F.265, N.267, S.270, F.273, F.274, A.277, W.278, V.281, G.282
- Chain C: Q.16, A.22, W.24
- Chain D: F.232, R.233
- Chain J: L.33, A.34, F.37
- Ligands: DGD.53, CLA.62, LFA.69, LHG.84
16 PLIP interactions:3 interactions with chain J, 10 interactions with chain A, 2 interactions with chain C, 1 interactions with chain D- Hydrophobic interactions: J:L.33, J:A.34, J:F.37, A:A.203, A:F.265, A:F.273, A:F.274, A:W.278, A:W.278, A:W.278, A:V.281, C:W.24
- Hydrogen bonds: A:N.267, A:S.270, C:Q.16
- Salt bridges: D:R.233
SQD.48: 19 residues within 4Å:- Chain 3: R.14, Y.18, L.21
- Chain 4: V.15, Y.26
- Chain 5: F.8, C.12, L.16, F.19, F.23
- Chain B: R.18, L.29, S.104, F.108, W.115
- Ligands: CLA.32, BCR.49, LFA.222, BCR.223
15 PLIP interactions:4 interactions with chain 5, 1 interactions with chain 4, 5 interactions with chain 3, 5 interactions with chain B- Hydrophobic interactions: 5:F.8, 5:L.16, 5:F.19, 5:F.19, 3:L.21, B:L.29, B:F.108
- Water bridges: 4:E.30, B:R.18, B:R.18
- Hydrogen bonds: 3:R.14, 3:R.14
- Salt bridges: 3:R.14, 3:R.14, B:R.18
SQD.86: 14 residues within 4Å:- Chain B: K.227, A.228, R.230
- Chain D: F.15, D.19, K.23, W.32, R.134, L.135
- Chain Q: F.25
- Ligands: CLA.26, CLA.27, LMT.44, LFA.88
10 PLIP interactions:6 interactions with chain D, 1 interactions with chain Q, 3 interactions with chain B- Hydrophobic interactions: D:W.32, D:W.32, Q:F.25
- Hydrogen bonds: D:D.19, D:R.134, B:R.230
- Salt bridges: D:K.23, D:K.23, B:R.230, B:R.230
SQD.101: 14 residues within 4Å:- Chain D: W.21, R.26
- Chain F: P.14, F.16, T.17, V.18, V.21
- Chain Q: V.20, T.24, V.27, I.31, D.35
- Ligands: PL9.10, CLA.81
8 PLIP interactions:4 interactions with chain Q, 2 interactions with chain D, 2 interactions with chain F- Hydrophobic interactions: Q:V.20, Q:V.27, Q:V.27, Q:I.31, D:W.21, F:V.18
- Salt bridges: D:R.26
- Hydrogen bonds: F:V.18
SQD.129: 23 residues within 4Å:- Chain 2: F.37
- Chain T: L.200, A.203, G.204, F.265, N.267, S.270, F.273, F.274, A.277, W.278, V.281, G.282
- Chain V: Q.16, A.22, W.23, W.24
- Chain W: F.232, R.233
- Ligands: LHG.138, PLM.189, BCR.217, PLM.219
17 PLIP interactions:11 interactions with chain T, 4 interactions with chain V, 2 interactions with chain 2- Hydrophobic interactions: T:A.203, T:F.265, T:F.273, T:A.277, T:W.278, T:W.278, T:W.278, T:V.281, V:W.23, V:W.24, 2:F.37, 2:F.37
- Hydrogen bonds: T:N.266, T:N.267, T:S.270, V:Q.16
- Water bridges: V:W.23
SQD.132: 17 residues within 4Å:- Chain 5: F.22
- Chain B: L.109, W.113, Y.117
- Chain G: R.3
- Chain T: W.20, N.26, R.27, L.28, V.30, L.42, T.45
- Ligands: BCR.36, BCR.49, PHO.126, CLA.192, LHG.201
9 PLIP interactions:7 interactions with chain T, 1 interactions with chain B, 1 interactions with chain G- Hydrophobic interactions: T:N.26, T:V.30, T:L.42, T:L.42, B:L.109
- Hydrogen bonds: T:N.26, T:R.27, T:L.28
- Salt bridges: G:R.3
SQD.142: 24 residues within 4Å:- Chain 3: R.7
- Chain K: R.14, L.17, Y.18, L.25
- Chain L: V.15, S.19, Y.26
- Chain N: C.12, L.16, F.19, F.23
- Chain U: R.18, M.25, A.28, L.29, S.104, F.108, W.115
- Ligands: BCR.117, CLA.156, BCR.159, BCR.160, PLM.220
15 PLIP interactions:6 interactions with chain K, 3 interactions with chain N, 3 interactions with chain U, 2 interactions with chain L, 1 interactions with chain 3- Hydrophobic interactions: K:L.17, K:Y.18, K:L.25, N:L.16, N:F.19, N:F.19, U:A.28, U:F.108, L:V.15, L:Y.26
- Hydrogen bonds: K:R.14, K:R.14
- Salt bridges: K:R.14, U:R.18, 3:R.7
SQD.199: 10 residues within 4Å:- Chain 6: T.24, V.27, I.31
- Chain W: R.24, R.26
- Chain Y: F.16, T.17, V.18, V.21
- Ligands: PL9.131
5 PLIP interactions:3 interactions with chain W, 2 interactions with chain Y- Hydrogen bonds: W:R.24, Y:V.18
- Salt bridges: W:R.24, W:R.26
- Hydrophobic interactions: Y:V.18
- 30 x LFA: EICOSANE(Non-covalent)(Non-functional Binders)
LFA.12: 3 residues within 4Å:- Chain A: W.14, F.17
- Chain H: F.14
Ligand excluded by PLIPLFA.13: 1 residues within 4Å:- Chain A: W.20
Ligand excluded by PLIPLFA.40: 5 residues within 4Å:- Chain B: W.91, L.149
- Ligands: CLA.23, CLA.24, BCR.36
Ligand excluded by PLIPLFA.41: 2 residues within 4Å:- Chain B: F.215, V.219
Ligand excluded by PLIPLFA.43: 4 residues within 4Å:- Chain B: S.76, L.98
- Ligands: GOL.39, LMT.133
Ligand excluded by PLIPLFA.45: 3 residues within 4Å:- Chain B: I.217
- Chain G: L.14
- Ligands: CLA.33
Ligand excluded by PLIPLFA.47: 2 residues within 4Å:- Chain B: F.90
- Ligands: PLM.46
Ligand excluded by PLIPLFA.69: 2 residues within 4Å:- Ligands: SQD.15, PLM.112
Ligand excluded by PLIPLFA.70: 3 residues within 4Å:- Chain C: A.234, W.238, L.241
Ligand excluded by PLIPLFA.72: 7 residues within 4Å:- Chain C: L.161, V.164, A.165, M.168, F.169, N.189, I.226
Ligand excluded by PLIPLFA.88: 5 residues within 4Å:- Chain D: W.32, F.130, R.134
- Ligands: CLA.26, SQD.86
Ligand excluded by PLIPLFA.89: 3 residues within 4Å:- Chain D: W.14
- Chain G: P.29
- Ligands: PLM.91
Ligand excluded by PLIPLFA.92: 2 residues within 4Å:- Chain D: W.14
- Chain Q: Q.33
Ligand excluded by PLIPLFA.97: 2 residues within 4Å:- Chain E: I.27, F.31
Ligand excluded by PLIPLFA.104: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPLFA.105: 4 residues within 4Å:- Chain H: M.1, L.4
- Ligands: CLA.8, BCR.9
Ligand excluded by PLIPLFA.106: 1 residues within 4Å:- Ligands: LMT.16
Ligand excluded by PLIPLFA.108: 2 residues within 4Å:- Chain H: M.1, T.7
Ligand excluded by PLIPLFA.109: 4 residues within 4Å:- Chain H: I.10, V.11, F.14
- Ligands: BCR.9
Ligand excluded by PLIPLFA.134: 4 residues within 4Å:- Chain 0: F.14
- Chain T: L.13, W.14, F.17
Ligand excluded by PLIPLFA.140: 2 residues within 4Å:- Chain T: W.14
- Ligands: LMT.186
Ligand excluded by PLIPLFA.165: 1 residues within 4Å:- Chain U: I.203
Ligand excluded by PLIPLFA.166: 1 residues within 4Å:- Chain U: L.218
Ligand excluded by PLIPLFA.168: 2 residues within 4Å:- Chain U: F.90
- Ligands: PLM.167
Ligand excluded by PLIPLFA.203: 7 residues within 4Å:- Chain 6: F.25
- Chain W: F.15, K.23, W.32
- Ligands: PLM.164, LMT.194, PLM.204
Ligand excluded by PLIPLFA.205: 2 residues within 4Å:- Chain 6: I.29
- Chain W: W.14
Ligand excluded by PLIPLFA.206: 6 residues within 4Å:- Chain X: P.28, F.31, I.32, W.35, S.39
- Ligands: LMT.209
Ligand excluded by PLIPLFA.210: 4 residues within 4Å:- Chain Z: P.29, A.32
- Ligands: LMT.194, PLM.212
Ligand excluded by PLIPLFA.216: 4 residues within 4Å:- Chain 0: I.10, F.14, F.15
- Ligands: BCR.128
Ligand excluded by PLIPLFA.222: 4 residues within 4Å:- Chain 4: I.23
- Ligands: CLA.32, SQD.48, LMT.115
Ligand excluded by PLIP- 1 x OEX: CA-MN4-O5 CLUSTER(Covalent)
OEX.14: 10 residues within 4Å:- Chain A: D.170, V.185, E.189, H.332, E.333, H.337, D.342, A.344
- Chain C: E.342, R.345
18 PLIP interactions:10 interactions with chain A, 4 interactions with chain C, 4 Ligand-Water interactions- Metal complexes: A:D.170, A:D.170, A:E.189, A:H.332, A:E.333, A:E.333, A:E.333, A:D.342, A:D.342, A:A.344, C:E.342, C:E.342, H2O.1, H2O.2, H2O.3, H2O.5
- Hydrogen bonds: C:R.345, C:R.345
- 17 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.16: 12 residues within 4Å:- Chain A: W.14, E.15
- Chain C: W.247, R.250
- Chain H: L.17, F.21, L.24, S.25, G.26
- Ligands: CLA.8, CLA.60, LFA.106
Ligand excluded by PLIPLMT.38: 10 residues within 4Å:- Chain 4: M.1, L.8, A.12
- Chain 5: M.1, I.4, F.8
- Chain B: Y.40
- Chain L: L.6
- Ligands: LMG.37, LMT.141
Ligand excluded by PLIPLMT.44: 14 residues within 4Å:- Chain B: R.224, A.228, K.498, D.501, T.503
- Chain D: R.12, D.19, K.23
- Chain G: W.25, A.32, M.35
- Chain Q: R.39
- Ligands: SQD.86, PLM.91
Ligand excluded by PLIPLMT.75: 13 residues within 4Å:- Chain C: A.111, F.115, Y.119, R.123, P.125
- Chain S: M.19, Y.27, W.33, K.37, I.40, S.44, W.47
- Ligands: CLA.67
Ligand excluded by PLIPLMT.93: 9 residues within 4Å:- Chain A: I.53, L.72, Y.73
- Chain D: R.304
- Chain M: G.138
- Chain U: L.39, A.43
- Ligands: PLM.18, LMT.118
Ligand excluded by PLIPLMT.99: 8 residues within 4Å:- Chain E: W.35, S.39
- Chain F: F.42, I.43, Q.44
- Chain I: V.23
- Ligands: PLM.96, PLM.111
Ligand excluded by PLIPLMT.110: 9 residues within 4Å:- Chain I: I.22, V.25, G.26, F.29, Y.30, Y.33
- Ligands: DGD.53, DGD.54, LMG.121
Ligand excluded by PLIPLMT.114: 15 residues within 4Å:- Chain 3: R.7, P.9, V.10
- Chain 4: V.17, V.20, I.24, Q.28, Q.32
- Chain L: V.27, E.30, S.31, Q.32, Q.33
- Ligands: CLA.156, PLM.220
Ligand excluded by PLIPLMT.115: 12 residues within 4Å:- Chain 4: E.30, S.31, Q.32, Q.33
- Chain K: P.9, V.10
- Chain L: V.17, I.24, Q.28, Q.32
- Ligands: CLA.32, LFA.222
Ligand excluded by PLIPLMT.118: 10 residues within 4Å:- Chain A: L.72
- Chain N: M.1, I.4, V.7, F.8
- Chain U: S.36, Y.40, A.43
- Ligands: LMT.93, BCR.117
Ligand excluded by PLIPLMT.119: 10 residues within 4Å:- Chain 4: L.6
- Chain L: M.1, L.8
- Chain N: M.1, F.8
- Chain U: Y.40
- Ligands: BCR.117, CLA.156, BCR.159, LMG.162
Ligand excluded by PLIPLMT.133: 10 residues within 4Å:- Chain B: L.39, L.42, A.43
- Chain T: I.53, A.54, L.72, Y.73
- Chain W: R.304
- Ligands: LFA.43, LMT.141
Ligand excluded by PLIPLMT.141: 12 residues within 4Å:- Chain 5: M.1, I.4, V.7, F.8
- Chain B: S.36, L.39, Y.40, A.43
- Chain T: L.72
- Ligands: LMT.38, BCR.49, LMT.133
Ligand excluded by PLIPLMT.186: 9 residues within 4Å:- Chain 0: L.24, S.25, G.26, R.30
- Chain T: W.14, E.15
- Chain V: W.247, R.250
- Ligands: LFA.140
Ligand excluded by PLIPLMT.194: 13 residues within 4Å:- Chain U: R.224, L.225, A.228
- Chain W: F.15, D.19, K.23
- Chain Z: W.25, M.31, A.32, M.35
- Ligands: PLM.164, LFA.203, LFA.210
Ligand excluded by PLIPLMT.209: 9 residues within 4Å:- Chain 1: V.23, I.24, L.27
- Chain X: F.31, W.35
- Chain Y: F.42, I.43, Q.44
- Ligands: LFA.206
Ligand excluded by PLIPLMT.228: 12 residues within 4Å:- Chain 8: M.19, Y.27, W.33, K.37, F.41, S.44, W.47
- Chain V: F.115, Y.119, R.123
- Ligands: CLA.182, BCR.227
Ligand excluded by PLIP- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.17: 10 residues within 4Å:- Chain A: H.215, V.219, E.244, Y.246, H.272
- Chain D: H.214, Y.244, K.264, H.268
- Ligands: FE2.1
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain D- Hydrogen bonds: A:Y.246, D:Y.244, D:K.264
BCT.137: 10 residues within 4Å:- Chain T: H.215, V.219, E.244, Y.246, H.272
- Chain W: H.214, Y.244, K.264, H.268
- Ligands: FE2.136
3 PLIP interactions:2 interactions with chain W, 1 interactions with chain T- Hydrogen bonds: W:Y.244, W:K.264, T:Y.246
- 29 x PLM: PALMITIC ACID(Non-covalent)(Non-functional Binders)
PLM.18: 7 residues within 4Å:- Chain A: D.103
- Chain U: W.75, S.76, E.94, L.98
- Ligands: BCR.9, LMT.93
Ligand excluded by PLIPPLM.42: 4 residues within 4Å:- Chain B: W.185, I.207, V.208
- Ligands: CLA.19
Ligand excluded by PLIPPLM.46: 6 residues within 4Å:- Chain B: W.75, D.87, P.88
- Chain T: L.102
- Ligands: LFA.47, BCR.128
Ligand excluded by PLIPPLM.68: 3 residues within 4Å:- Chain C: Y.131
- Ligands: CLA.67, BCR.76
Ligand excluded by PLIPPLM.71: 5 residues within 4Å:- Chain C: F.134, F.135
- Ligands: CLA.66, CLA.67, BCR.76
Ligand excluded by PLIPPLM.73: 4 residues within 4Å:- Chain C: W.85, F.170
- Ligands: CLA.56, LMG.74
Ligand excluded by PLIPPLM.90: 9 residues within 4Å:- Chain D: L.92, W.93, G.99
- Chain Q: I.12, S.16, G.17, V.20, L.21
- Ligands: CLA.81
Ligand excluded by PLIPPLM.91: 4 residues within 4Å:- Chain D: W.14
- Chain G: W.25
- Ligands: LMT.44, LFA.89
Ligand excluded by PLIPPLM.95: 7 residues within 4Å:- Chain E: F.10, S.11, I.14
- Chain I: L.10
- Ligands: LHG.94, HEM.98, PLM.100
Ligand excluded by PLIPPLM.96: 5 residues within 4Å:- Chain E: F.31, W.35
- Chain I: V.23, I.24
- Ligands: LMT.99
Ligand excluded by PLIPPLM.100: 9 residues within 4Å:- Chain E: I.14, Y.19
- Chain I: L.10, V.13, A.14, A.17
- Chain J: G.44, F.45
- Ligands: PLM.95
Ligand excluded by PLIPPLM.111: 7 residues within 4Å:- Chain F: F.42
- Chain I: V.23, G.26, L.27, Y.30
- Ligands: LMT.99, LMG.121
Ligand excluded by PLIPPLM.112: 5 residues within 4Å:- Chain C: W.23
- Chain J: G.44, F.45
- Ligands: LFA.69, BCR.122
Ligand excluded by PLIPPLM.135: 3 residues within 4Å:- Chain T: R.16, W.20
- Ligands: BCR.128
Ligand excluded by PLIPPLM.163: 5 residues within 4Å:- Chain U: W.91, L.149
- Ligands: CLA.148, CLA.158, BCR.161
Ligand excluded by PLIPPLM.164: 8 residues within 4Å:- Chain U: A.228, R.230
- Chain W: K.23
- Ligands: CLA.150, CLA.151, LMT.194, LFA.203, PLM.204
Ligand excluded by PLIPPLM.167: 5 residues within 4Å:- Chain A: I.50, L.102
- Chain U: W.75, G.89
- Ligands: LFA.168
Ligand excluded by PLIPPLM.169: 3 residues within 4Å:- Chain U: W.185, A.204
- Ligands: CLA.143
Ligand excluded by PLIPPLM.187: 4 residues within 4Å:- Chain V: F.134
- Ligands: CLA.181, CLA.182, BCR.218
Ligand excluded by PLIPPLM.188: 5 residues within 4Å:- Chain V: L.161, M.168, N.189, P.190, I.226
Ligand excluded by PLIPPLM.189: 2 residues within 4Å:- Ligands: SQD.129, PLM.219
Ligand excluded by PLIPPLM.191: 3 residues within 4Å:- Chain V: W.85
- Ligands: CLA.171, LMG.190
Ligand excluded by PLIPPLM.204: 9 residues within 4Å:- Chain U: L.474
- Chain W: W.32, I.35, L.36, L.127, F.130, R.134
- Ligands: PLM.164, LFA.203
Ligand excluded by PLIPPLM.212: 3 residues within 4Å:- Chain W: W.14
- Chain Z: W.25
- Ligands: LFA.210
Ligand excluded by PLIPPLM.213: 3 residues within 4Å:- Chain 0: M.1, L.4
- Ligands: BCR.128
Ligand excluded by PLIPPLM.214: 3 residues within 4Å:- Chain 0: M.1, T.3, L.4
Ligand excluded by PLIPPLM.219: 5 residues within 4Å:- Chain 2: G.44, F.45
- Chain V: W.23
- Ligands: SQD.129, PLM.189
Ligand excluded by PLIPPLM.220: 5 residues within 4Å:- Chain 3: R.7
- Chain L: I.23
- Ligands: LMT.114, SQD.142, CLA.156
Ligand excluded by PLIPPLM.224: 8 residues within 4Å:- Chain 6: I.12, S.16, G.17, V.20, L.21
- Chain W: W.93, G.99
- Ligands: CLA.196
Ligand excluded by PLIP- 10 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.37: 22 residues within 4Å:- Chain B: Y.40, T.327, G.328, P.329, K.332, A.454, V.457
- Chain D: I.284
- Chain K: F.35
- Chain L: N.4, L.6, A.10, L.13, F.14
- Ligands: CLA.25, CLA.31, CLA.32, BCR.35, LMT.38, LHG.82, LHG.113, BCR.223
14 PLIP interactions:6 interactions with chain B, 4 interactions with chain L, 3 interactions with chain K, 1 interactions with chain D- Hydrophobic interactions: B:A.454, L:A.10, L:L.13, L:F.14, K:F.35, K:F.35, K:F.35, D:I.284
- Hydrogen bonds: B:T.327, B:T.327, L:N.4
- Water bridges: B:T.327, B:T.327, B:L.437
LMG.74: 15 residues within 4Å:- Chain C: V.49, W.85, D.95, F.97, P.98, V.101, V.102, V.105, H.106, S.109
- Chain S: F.59
- Ligands: CLA.57, CLA.67, PLM.73, BCR.76
8 PLIP interactions:8 interactions with chain C- Hydrophobic interactions: C:V.49, C:W.85, C:W.85, C:P.98, C:P.98, C:V.102, C:V.105
- Hydrogen bonds: C:D.95
LMG.85: 21 residues within 4Å:- Chain D: L.49, Y.67, G.70, C.71, N.72, F.73
- Chain F: A.27, T.30, I.37, M.40, Q.41
- Chain I: F.28, G.31, A.32, L.36, G.37
- Ligands: CLA.6, DGD.54, BCR.79, CLA.80, HEM.98
16 PLIP interactions:3 interactions with chain F, 9 interactions with chain D, 4 interactions with chain I- Hydrophobic interactions: F:A.27, D:L.49, D:F.73, D:F.73, D:F.73, D:F.73, I:F.28
- Hydrogen bonds: F:M.40, F:Q.41, D:F.73, I:F.28, I:G.31
- Water bridges: D:G.70, D:N.72, D:N.72, I:G.37
LMG.107: 21 residues within 4Å:- Chain A: F.93, W.97, E.98, F.117, L.120, L.121, F.155
- Chain C: L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269, F.272
- Chain H: K.5, Y.9
- Ligands: CLA.8, DGD.52, CLA.59
13 PLIP interactions:4 interactions with chain A, 1 interactions with chain H, 8 interactions with chain C- Hydrophobic interactions: A:F.117, A:L.120, A:F.155, C:F.206, C:F.206, C:W.211, C:W.211, C:F.272
- Hydrogen bonds: A:W.97, H:Y.9, C:E.209
- Water bridges: C:S.204, C:S.204
LMG.121: 15 residues within 4Å:- Chain C: F.58, H.62, Q.72
- Chain I: I.22
- Chain J: D.23, V.27, V.30
- Chain R: V.18, Q.21, I.25
- Ligands: DGD.53, CLA.56, CLA.58, LMT.110, PLM.111
10 PLIP interactions:2 interactions with chain C, 3 interactions with chain R, 4 interactions with chain J, 1 interactions with chain I- Water bridges: C:H.62
- Salt bridges: C:H.62
- Hydrophobic interactions: R:V.18, R:I.25, J:V.27, J:V.30, J:V.30, I:I.22
- Hydrogen bonds: R:Q.21, J:D.23
LMG.130: 21 residues within 4Å:- Chain 0: K.5, Y.9
- Chain T: F.93, W.97, E.98, F.117, L.120, S.124, F.155
- Chain V: L.202, K.203, S.204, P.205, F.206, E.209, W.211, M.269, F.272
- Ligands: CLA.127, CLA.174, DGD.183
14 PLIP interactions:3 interactions with chain 0, 5 interactions with chain T, 6 interactions with chain V- Hydrogen bonds: 0:K.5, 0:Y.9, 0:Y.9, T:W.97, V:E.209
- Hydrophobic interactions: T:F.117, T:F.117, T:L.120, T:F.155, V:F.206, V:F.206, V:W.211, V:W.211, V:F.272
LMG.162: 22 residues within 4Å:- Chain 3: F.35
- Chain 4: N.4, L.6, A.10, L.13, F.14, V.17
- Chain U: T.327, G.328, P.329, A.454, V.457, F.458
- Chain W: I.284
- Ligands: LMT.119, CLA.149, CLA.155, CLA.156, BCR.159, BCR.160, LHG.200, LHG.221
13 PLIP interactions:5 interactions with chain U, 5 interactions with chain 4, 1 interactions with chain W, 2 interactions with chain 3- Hydrophobic interactions: U:A.454, U:F.458, U:F.458, 4:A.10, 4:L.13, 4:L.13, 4:F.14, 4:V.17, W:I.284, 3:F.35, 3:F.35
- Hydrogen bonds: U:T.327, U:T.327
LMG.190: 15 residues within 4Å:- Chain 8: F.59
- Chain V: V.49, W.85, D.95, F.97, P.98, V.101, V.102, V.105, H.106, S.109
- Ligands: CLA.172, CLA.182, PLM.191, BCR.218
7 PLIP interactions:7 interactions with chain V- Hydrophobic interactions: V:V.49, V:W.85, V:P.98, V:V.102, V:V.105, V:V.105
- Hydrogen bonds: V:D.95
LMG.202: 18 residues within 4Å:- Chain 1: F.28, G.31, A.32
- Chain W: L.49, Y.67, G.70, C.71, N.72, F.73
- Chain Y: L.26, T.30, I.37, M.40, Q.41, R.45
- Ligands: CLA.125, DGD.185, BCR.207
22 PLIP interactions:5 interactions with chain Y, 14 interactions with chain W, 3 interactions with chain 1- Hydrophobic interactions: Y:L.26, Y:T.30, W:L.49, W:L.49, W:F.73, W:F.73, W:F.73, W:F.73, W:F.73, W:F.73, 1:F.28
- Hydrogen bonds: Y:M.40, Y:Q.41, Y:R.45, W:Y.67, W:G.70, W:F.73, 1:F.28, 1:G.31
- Water bridges: W:N.72, W:N.72, W:N.72
LMG.226: 12 residues within 4Å:- Chain 1: I.22
- Chain 2: D.23, V.24, V.27
- Chain 7: Q.21
- Chain V: F.58, H.62
- Ligands: CLA.171, CLA.173, CLA.177, CLA.179, DGD.184
6 PLIP interactions:2 interactions with chain 1, 1 interactions with chain 7, 2 interactions with chain 2, 1 interactions with chain V- Hydrophobic interactions: 1:I.22, 1:I.22, 2:V.27, 2:V.27
- Hydrogen bonds: 7:Q.21
- Salt bridges: V:H.62
- 1 x GOL: GLYCEROL(Non-functional Binders)
- 10 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.52: 27 residues within 4Å:- Chain A: L.91, L.151, F.155, I.160, I.163
- Chain C: P.205, F.206, G.207, G.208, E.209, G.210, V.213, S.214, V.215, N.216, F.272, I.273, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, L.426
- Ligands: LMG.107
18 PLIP interactions:13 interactions with chain C, 5 interactions with chain A- Hydrophobic interactions: C:F.206, C:F.272, C:F.272, C:F.272, C:I.273, C:L.426, A:L.151, A:F.155, A:F.155, A:I.160, A:I.163
- Hydrogen bonds: C:G.208, C:N.282, C:T.283, C:T.283, C:D.348, C:R.350, C:R.350
DGD.53: 22 residues within 4Å:- Chain A: F.197, L.297
- Chain C: E.71, Q.72, G.73, L.392, S.394, N.406, F.407, V.408, W.413, T.416, S.417
- Chain I: F.29, Y.33
- Ligands: SQD.15, DGD.54, CLA.58, CLA.62, LHG.84, LMT.110, LMG.121
16 PLIP interactions:12 interactions with chain C, 2 interactions with chain I, 2 interactions with chain A- Hydrophobic interactions: C:L.392, C:W.413, I:F.29, A:F.197, A:L.297
- Hydrogen bonds: C:S.394, C:N.406, C:V.408, C:V.408, C:W.413, I:Y.33
- Water bridges: C:E.71, C:E.71, C:G.73, C:G.73, C:N.406
DGD.54: 30 residues within 4Å:- Chain A: P.196, Q.199, L.200, A.203, W.278, F.300, N.301, F.302, S.305
- Chain C: N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain D: N.72
- Chain I: F.29, A.32, Y.33, G.37, S.38, S.39, L.40
- Chain P: Q.60
- Ligands: CLA.6, DGD.53, CLA.58, LMG.85, LMT.110
19 PLIP interactions:7 interactions with chain A, 1 interactions with chain D, 5 interactions with chain I, 5 interactions with chain C, 1 interactions with chain P- Hydrophobic interactions: A:P.196, A:L.200, A:L.200, A:A.203, A:W.278, A:F.302, D:N.72, I:F.29, I:F.29
- Hydrogen bonds: A:S.305, I:Y.33, I:G.37, I:S.39, C:N.393, C:S.394, C:N.403, C:N.403, C:N.406, P:Q.60
DGD.87: 10 residues within 4Å:- Chain D: G.99, D.100, F.101, T.102
- Chain E: F.37, D.45, V.46, F.47
- Ligands: BCR.79, CLA.81
7 PLIP interactions:2 interactions with chain E, 5 interactions with chain D- Hydrophobic interactions: E:F.37, E:V.46, D:F.101, D:F.101, D:F.101, D:F.101, D:F.101
DGD.102: 28 residues within 4Å:- Chain B: Y.193, F.250, G.254, Y.258, Y.273, Q.274, S.277, Y.279, T.452, F.463
- Chain D: G.86, H.87, L.89, F.120, I.123, V.154, L.162, G.163, S.165, L.291
- Chain G: L.46, Y.49, N.50, V.60, S.61, W.62
- Ligands: CLA.20, CLA.26
23 PLIP interactions:7 interactions with chain B, 9 interactions with chain D, 7 interactions with chain G- Hydrophobic interactions: B:Y.258, B:T.452, B:F.463, D:L.89, D:F.120, D:V.154, D:L.162, D:L.291, G:Y.49, G:Y.49
- Hydrogen bonds: B:Y.193, B:Y.193, B:Y.258, B:S.277, D:H.87, D:H.87, D:S.165, G:N.50, G:V.60, G:S.61
- Water bridges: D:H.87, G:S.61, G:S.61
DGD.183: 32 residues within 4Å:- Chain T: L.91, S.148, L.151, A.152, F.155, I.163
- Chain V: P.205, F.206, G.207, G.208, E.209, G.210, W.211, V.213, S.214, V.215, N.216, F.272, C.276, F.280, N.281, N.282, T.283, D.348, F.349, R.350, F.423, L.426
- Ligands: CLA.127, LMG.130, CLA.174, CLA.175
19 PLIP interactions:4 interactions with chain T, 15 interactions with chain V- Hydrophobic interactions: T:L.151, T:F.155, T:F.155, T:I.163, V:F.206, V:W.211, V:V.213, V:F.272, V:F.272, V:F.423, V:L.426
- Hydrogen bonds: V:G.208, V:N.282, V:T.283, V:T.283, V:D.348, V:R.350, V:R.350
- Water bridges: V:P.205
DGD.184: 14 residues within 4Å:- Chain 1: V.25, F.29, Y.33
- Chain T: F.197, L.297
- Chain V: L.392, S.394, N.406, T.416, S.417
- Ligands: CLA.173, CLA.177, DGD.185, LMG.226
8 PLIP interactions:3 interactions with chain 1, 2 interactions with chain T, 3 interactions with chain V- Hydrophobic interactions: 1:V.25, 1:F.29, 1:F.29, T:F.197, T:L.297, V:L.392, V:L.392
- Hydrogen bonds: V:N.406
DGD.185: 28 residues within 4Å:- Chain 1: F.29, A.32, Y.33
- Chain T: P.196, Q.199, L.200, A.203, W.278, F.285, F.300, N.301, F.302, S.305
- Chain V: L.392, N.393, S.394, V.395, N.403, S.404, V.405, N.406
- Chain W: N.72
- Ligands: CLA.125, LHG.138, CLA.173, CLA.177, DGD.184, LMG.202
18 PLIP interactions:8 interactions with chain T, 4 interactions with chain V, 2 interactions with chain W, 4 interactions with chain 1- Hydrophobic interactions: T:Q.199, T:L.200, T:A.203, T:W.278, T:F.285, T:F.285, T:F.300, 1:F.29, 1:F.29
- Water bridges: T:S.305, W:N.72, W:N.72, 1:A.32
- Hydrogen bonds: V:N.393, V:N.403, V:N.403, V:V.405, 1:Y.33
DGD.198: 9 residues within 4Å:- Chain W: L.92, G.99, F.101, T.102
- Chain X: F.37, L.42, D.45, V.46, F.47
7 PLIP interactions:3 interactions with chain X, 4 interactions with chain W- Hydrophobic interactions: X:F.37, X:V.46, X:F.47, W:L.92, W:F.101, W:F.101, W:F.101
DGD.211: 28 residues within 4Å:- Chain U: Y.193, F.250, G.254, Y.258, Y.273, Q.274, S.277, Y.279, T.452, A.456, F.463
- Chain W: G.86, H.87, F.120, I.123, I.159, L.162, G.163, S.165, L.291
- Chain Z: L.46, Y.49, N.50, V.60, S.61, W.62
- Ligands: CLA.144, CLA.150
21 PLIP interactions:9 interactions with chain W, 4 interactions with chain Z, 8 interactions with chain U- Hydrophobic interactions: W:F.120, W:I.159, W:L.162, W:L.162, W:L.291, Z:Y.49, Z:Y.49, U:Y.258, U:T.452, U:A.456, U:F.463, U:F.463
- Hydrogen bonds: W:H.87, W:H.87, W:S.165, Z:V.60, U:Y.193, U:Y.193, U:Y.258
- Water bridges: W:H.87, Z:N.50
- 10 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.82: 27 residues within 4Å:- Chain A: S.232, N.234
- Chain B: W.5, Y.6, R.7, L.461, F.464, W.468, F.479
- Chain D: R.139, Y.141, I.144, W.266, F.269, L.272, F.273, V.276, T.277, M.281
- Chain K: I.24, L.27
- Chain L: P.18
- Ligands: CLA.25, CLA.29, CLA.31, LMG.37, LHG.113
13 PLIP interactions:3 interactions with chain D, 1 interactions with chain L, 5 interactions with chain B, 2 interactions with chain K, 2 interactions with chain A- Hydrophobic interactions: D:F.273, D:V.276, L:P.18, B:W.5, B:L.461, K:I.24, K:L.27
- Hydrogen bonds: D:R.139, B:Y.6, A:S.232, A:N.234
- Water bridges: B:R.7
- Salt bridges: B:R.7
LHG.83: 27 residues within 4Å:- Chain A: M.37
- Chain D: I.256, F.257, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Chain K: N.13, T.15, S.16, Y.18, L.19, L.22, V.26
- Chain N: F.10, I.13, F.17, A.20, I.21
- Ligands: CLA.5, PHO.7, SQD.11, LHG.113, BCR.117
21 PLIP interactions:9 interactions with chain D, 6 interactions with chain N, 6 interactions with chain K- Hydrophobic interactions: D:F.257, D:I.259, D:I.259, D:F.261, D:F.270, D:F.270, N:F.10, N:I.13, N:F.17, N:F.17, N:A.20, N:I.21, K:Y.18, K:L.22, K:V.26
- Hydrogen bonds: D:S.262, D:S.262, D:N.263, K:N.13, K:S.16
- Water bridges: K:T.15
LHG.84: 22 residues within 4Å:- Chain A: R.140, W.142, A.146, F.273, A.277, W.284, F.285
- Chain C: F.21, W.24, A.25, W.431, R.435
- Chain D: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.15, DGD.53, CLA.58, CLA.62
16 PLIP interactions:7 interactions with chain A, 5 interactions with chain C, 4 interactions with chain D- Hydrophobic interactions: A:W.142, A:A.146, A:F.273, A:W.284, A:F.285, C:W.24, C:W.24, C:W.431
- Water bridges: A:R.140
- Salt bridges: A:R.140
- Hydrogen bonds: C:R.435, C:R.435, D:N.220, D:A.229, D:S.230, D:T.231
LHG.94: 22 residues within 4Å:- Chain A: L.258, I.259, F.260, Y.262, A.263, S.264, F.265
- Chain D: F.27, L.37, F.38, F.125, R.128
- Chain E: T.4, E.7, R.8, P.9, F.10, S.11
- Chain F: R.19, A.22
- Ligands: PL9.10, PLM.95
16 PLIP interactions:5 interactions with chain D, 5 interactions with chain A, 4 interactions with chain E, 2 interactions with chain F- Hydrophobic interactions: D:F.27, D:F.27, D:L.37, D:F.38, D:F.125, A:I.259, A:F.260, A:A.263, A:F.265, A:F.265, E:F.10, F:A.22
- Hydrogen bonds: E:E.7, E:F.10, E:S.11, F:R.19
LHG.113: 25 residues within 4Å:- Chain A: S.232, N.234
- Chain B: P.4, W.5, Y.6
- Chain D: W.266, F.270, F.273
- Chain K: E.11, L.12, N.13, S.16, L.19, G.20, L.23
- Chain L: P.18, F.21, L.22
- Ligands: CLA.5, CLA.29, CLA.32, LMG.37, PL9.78, LHG.82, LHG.83
17 PLIP interactions:3 interactions with chain A, 5 interactions with chain K, 2 interactions with chain B, 3 interactions with chain L, 4 interactions with chain D- Hydrogen bonds: A:S.232, A:S.232, A:N.234, K:E.11, K:E.11, K:N.13, K:S.16, B:W.5
- Hydrophobic interactions: K:L.23, B:W.5, L:P.18, L:F.21, L:L.22, D:W.266, D:F.270, D:F.273, D:F.273
LHG.138: 18 residues within 4Å:- Chain T: R.140, W.142, A.146, F.273, W.284
- Chain V: W.24, W.431, R.435
- Chain W: E.219, N.220, A.229, S.230, T.231, F.232
- Ligands: SQD.129, CLA.173, CLA.177, DGD.185
16 PLIP interactions:6 interactions with chain T, 5 interactions with chain W, 5 interactions with chain V- Hydrophobic interactions: T:W.142, T:A.146, T:F.273, T:W.284, V:W.24, V:W.24, V:W.431
- Water bridges: T:R.140, W:T.231
- Salt bridges: T:R.140
- Hydrogen bonds: W:N.220, W:A.229, W:S.230, W:T.231, V:R.435, V:R.435
LHG.139: 16 residues within 4Å:- Chain T: L.258, I.259, F.260, Y.262, A.263, S.264, F.265, N.266
- Chain W: F.27, V.28, L.37
- Chain X: P.9, F.10, S.11
- Ligands: PL9.131, PHO.193
13 PLIP interactions:3 interactions with chain W, 5 interactions with chain X, 5 interactions with chain T- Hydrophobic interactions: W:F.27, W:V.28, W:L.37, X:F.10, T:F.260, T:F.260, T:Y.262, T:F.265
- Hydrogen bonds: X:F.10, X:S.11, X:S.11, X:S.11, T:Y.262
LHG.200: 24 residues within 4Å:- Chain 3: L.23
- Chain 4: P.18
- Chain T: S.232, N.234
- Chain U: W.5, Y.6, R.7, L.461, F.464, W.468
- Chain W: R.139, Y.141, I.144, W.266, F.269, F.273, V.276, T.277, M.281
- Ligands: CLA.149, CLA.153, CLA.155, LMG.162, LHG.221
12 PLIP interactions:5 interactions with chain W, 4 interactions with chain U, 2 interactions with chain T, 1 interactions with chain 4- Hydrophobic interactions: W:F.273, W:F.273, W:V.276, U:L.461, 4:P.18
- Hydrogen bonds: W:R.139, U:Y.6, T:N.234, T:N.234
- Water bridges: W:Y.141, U:R.7
- Salt bridges: U:R.7
LHG.201: 27 residues within 4Å:- Chain 3: N.13, T.15, S.16, Y.18, L.19, L.22, V.26
- Chain 5: F.10, F.17, A.20
- Chain T: M.37, R.129
- Chain W: I.256, F.257, I.259, A.260, F.261, S.262, N.263, W.266, F.270
- Ligands: CLA.124, PHO.126, SQD.132, CLA.192, PL9.197, LHG.221
19 PLIP interactions:7 interactions with chain 3, 4 interactions with chain 5, 8 interactions with chain W- Hydrophobic interactions: 3:Y.18, 3:L.22, 3:V.26, 5:F.10, 5:F.17, 5:F.17, 5:A.20, W:F.257, W:I.259, W:I.259, W:F.261, W:F.270
- Hydrogen bonds: 3:N.13, 3:N.13, 3:T.15, 3:S.16, W:S.262, W:S.262, W:N.263
LHG.221: 27 residues within 4Å:- Chain 3: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23, V.26
- Chain 4: P.18, F.21
- Chain T: S.232, N.234
- Chain U: P.4, W.5, Y.6
- Chain W: W.266, F.270, F.273
- Ligands: CLA.153, CLA.156, BCR.159, LMG.162, CLA.192, PL9.197, LHG.200, LHG.201
19 PLIP interactions:9 interactions with chain 3, 2 interactions with chain U, 1 interactions with chain 4, 3 interactions with chain T, 4 interactions with chain W- Hydrophobic interactions: 3:L.22, 3:L.22, 3:L.23, 3:V.26, 3:V.26, U:W.5, 4:F.21, W:F.270, W:F.273, W:F.273, W:F.273
- Hydrogen bonds: 3:E.11, 3:E.11, 3:N.13, 3:S.16, U:W.5, T:S.232, T:S.232, T:N.234
- 3 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.98: 20 residues within 4Å:- Chain E: R.8, F.10, I.13, R.18, Y.19, I.22, H.23, T.26, I.27, L.30
- Chain F: I.15, R.19, W.20, V.23, H.24, A.27, V.28, I.31
- Ligands: LMG.85, PLM.95
19 PLIP interactions:9 interactions with chain F, 10 interactions with chain E,- Hydrophobic interactions: F:I.15, F:W.20, F:V.23, F:A.27, F:V.28, E:F.10, E:I.13, E:I.22, E:T.26, E:I.27
- Salt bridges: F:R.19, E:R.8, E:R.18
- pi-Stacking: F:W.20, F:W.20, E:Y.19
- Metal complexes: F:H.24, E:H.23
- Water bridges: E:R.8
HEM.120: 23 residues within 4Å:- Chain C: A.381
- Chain P: A.62, C.63, C.66, H.67, T.72, T.74, N.75, L.78, D.79, L.80, T.84, L.85, A.88, L.98, Y.101, M.102, T.107, Y.108, I.114, H.118, P.119, M.130
16 PLIP interactions:1 interactions with chain C, 15 interactions with chain P,- Hydrophobic interactions: C:A.381, P:T.72, P:N.75, P:L.78, P:L.80, P:L.98, P:Y.101, P:I.114, P:P.119
- Hydrogen bonds: P:N.75, P:D.79, P:D.79, P:Y.108
- pi-Stacking: P:Y.101
- Metal complexes: P:H.67, P:H.118
HEM.208: 17 residues within 4Å:- Chain X: F.10, I.13, R.18, Y.19, I.22, H.23, T.26, I.27, L.30
- Chain Y: I.15, R.19, W.20, V.23, H.24, A.27, V.28, I.31
18 PLIP interactions:10 interactions with chain X, 8 interactions with chain Y,- Hydrophobic interactions: X:I.13, X:Y.19, X:I.22, X:T.26, X:I.27, X:I.27, X:L.30, Y:I.15, Y:V.23, Y:A.27
- Salt bridges: X:R.18, Y:R.19
- pi-Stacking: X:Y.19, Y:W.20, Y:W.20
- Metal complexes: X:H.23, Y:H.24
- pi-Cation interactions: Y:H.24
- 2 x RRX: (3R)-beta,beta-caroten-3-ol(Non-covalent)
RRX.103: 18 residues within 4Å:- Chain G: M.31, F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Chain Q: T.2, I.3, L.7, F.11
- Ligands: CLA.19, CLA.20, CLA.21, CLA.27, CLA.28
10 PLIP interactions:3 interactions with chain Q, 7 interactions with chain G- Hydrophobic interactions: Q:L.7, Q:F.11, G:F.38, G:F.38, G:F.38, G:F.38, G:V.40, G:F.41, G:L.55
- Hydrogen bonds: Q:T.2
RRX.225: 18 residues within 4Å:- Chain 6: T.2, I.3, L.7, F.11
- Chain Z: M.31, F.34, M.35, L.37, F.38, V.40, F.41, I.44, L.55
- Ligands: CLA.143, CLA.144, CLA.145, CLA.151, CLA.152
11 PLIP interactions:8 interactions with chain Z, 3 interactions with chain 6- Hydrophobic interactions: Z:F.38, Z:F.38, Z:F.38, Z:F.38, Z:V.40, Z:F.41, Z:I.44, Z:L.55, 6:L.7, 6:F.11
- Hydrogen bonds: 6:T.2
- 1 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhao, Z. et al., Semi-active PSII dimer from the Peak4 PSII dimers. To Be Published
- Release Date
- 2025-07-30
- Peptides
- Photosystem II protein D1 1: A
Photosystem II CP47 reaction center protein: BU
Photosystem II CP43 reaction center protein: CV
Photosystem II D2 protein: DW
Cytochrome b559 subunit alpha: EX
Cytochrome b559 subunit beta: FY
Photosystem II reaction center protein H: GZ
Photosystem II reaction center protein I: H0
Photosystem II reaction center protein J: I1
Photosystem II reaction center protein K: J2
Photosystem II reaction center protein L: K3
Photosystem II reaction center protein M: L4
Photosystem II manganese-stabilizing polypeptide: M
Photosystem II reaction center protein T: N5
Photosystem II 12 kDa extrinsic protein: O
Cytochrome c-550: P
Photosystem II reaction center X protein: Q6
Photosystem II reaction center protein Ycf12: R7
Photosystem II reaction center protein Z: S8
Photosystem II protein D1 1: T - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BU
bC
CV
cD
DW
dE
EX
eF
FY
fG
HZ
hH
I0
iI
J1
jJ
K2
kK
L3
lL
M4
mM
ON
T5
tO
UP
VQ
X6
xR
Y7
yS
Z8
zT
a - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 9g6g.1
Semi-active PSII dimer from native Peak4 PSII dimers
Photosystem II protein D1 1
Photosystem II CP47 reaction center protein
Photosystem II CP43 reaction center protein
Photosystem II D2 protein
Toggle Identical (DW)Cytochrome b559 subunit alpha
Cytochrome b559 subunit beta
Photosystem II reaction center protein H
Toggle Identical (GZ)Photosystem II reaction center protein I
Toggle Identical (H0)Photosystem II reaction center protein J
Photosystem II reaction center protein K
Toggle Identical (J2)Photosystem II reaction center protein L
Toggle Identical (K3)Photosystem II reaction center protein M
Toggle Identical (L4)Photosystem II manganese-stabilizing polypeptide
Photosystem II reaction center protein T
Toggle Identical (N5)Photosystem II 12 kDa extrinsic protein
Cytochrome c-550
Photosystem II reaction center X protein
Toggle Identical (Q6)Photosystem II reaction center protein Ycf12
Photosystem II reaction center protein Z
Toggle Identical (S8)Photosystem II protein D1 1
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1izl.1 | 1s5l.1 | 1s5l.2 | 1w5c.1 | 1w5c.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1 more...less...5e79.1 | 5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kaf.1 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6dhp.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1 | 9evx.1 | 9g6f.1 | 9g6h.1