SMTL ID : 2zla.1

2-Substituted-16-ene-22-thia-1alpha,25-dihydroxy-26,27-dimethyl-19-norvitamin D3 analogs: Synthesis, biological evaluation and crystal structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x VDB: (1R,2S,3R,5Z,7E)-17-{(1R)-1-[(2-ethyl-2-hydroxybutyl)sulfanyl]ethyl}-2-(2-hydroxyethoxy)-9,10-secoestra-5,7,16-triene-1,3-diol(Non-covalent)

VDB.1: 22 residues within 4Å: Chain A: T.37, Y.38, D.39, Y.42, F.45, L.71, A.75, L.77, V.78, Y.80, S.81, I.115, R.118, S.119, S.122, W.130, C.132, V.144, A.147, H.149, H.241, L.248 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.71, A:L.77, A:L.77, A:W.130, A:W.130, A:V.144, A:V.144, A:L.248 Hydrogen bonds: A:T.37, A:D.39, A:R.118, A:R.118, A:S.122, A:S.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shimizu, M. et al., 2-Substituted-16-ene-22-thia-1alpha,25-dihydroxy-26,27-dimethyl-19-norvitamin D3 analogs: Synthesis, biological evaluation, and crystal structure. Bioorg.Med.Chem. (2008)

Release Date

2008-06-24

Peptides

Vitamin D3 receptor: A
Coactivator peptide DRIP: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Vitamin D3 receptor

Coactivator peptide DRIP

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