SMTL ID : 6jez.1

Covalent labeling of rVDR-LBD by turn-on fluorescent probe mediated by conjugate addition and cyclization

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.30 Å
Oligo State
hetero-1-1-mer
Ligands
1 x YSV: (1R,3R)-5-(2-((1R,3aS,7aR,E)-1-((R)-6-hydroxy-6-methylheptan-2-yl)-7a-methyloctahydro-4H-inden-4-ylidene)ethylidene)-2-methylenecyclohexane-1,3-diol(Non-covalent)
1 x EJO: 7-(diethylamino)chromen-2-one(Covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Kojima, H. et al., Cyclization Reaction-Based Turn-on Probe for Covalent Labeling of Target Proteins. Cell Chem Biol (2020)
Release Date
2020-02-12
Peptides
Vitamin D3 receptor,Vitamin D3 receptor: A
Mediator of RNA polymerase II transcription subunit 1: B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
C

Vitamin D3 receptor,Vitamin D3 receptor

Mediator of RNA polymerase II transcription subunit 1

Related Entries With Identical Sequence

1rjk.1 | 1rjk.2 | 1rk3.1 | 1rk3.2 | 1rkg.1 | 1rkg.2 | 1rkh.1 | 1rkh.2 | 2o4j.1 | 2o4j.2 | 2o4r.1 | 2o4r.2 | 2zfx.1 | 2zl9.1 | 2zla.1 | 2zlc.1 | 2zmh.1 | 2zmi.1 | 2zmj.1 | 2zxm.1 | 2zxm.2 | 2zxn.1 | 2zxn.2 | 3a2h.1 | 3afr.1 | 3aun.1 | 3vjs.1 | 3vjt.1 | 3vrt.1 | 3vru.1  more...