- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.04 Å
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 2 x OEX: CA-MN4-O5 CLUSTER(Covalent)
- 2 x FE2: FE (II) ION(Non-covalent)
FE2.2: 7 residues within 4Å:- Chain A: H.205, V.209, H.262
- Chain D: H.203, Y.233, H.257
- Ligands: BCT.70
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain D- Metal complexes: A:H.205, A:H.262, D:H.203, D:H.257
FE2.97: 6 residues within 4Å:- Chain U: H.205, V.209, H.262
- Chain X: H.203, H.257
- Ligands: BCT.105
4 PLIP interactions:2 interactions with chain U, 2 interactions with chain X- Metal complexes: U:H.205, U:H.262, X:H.203, X:H.257
- 70 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.3: 36 residues within 4Å:- Chain A: F.109, A.113, Y.137, P.140, L.141, S.143, A.144, A.146, V.147, F.172, M.173, I.174, F.176, Q.177, I.182, L.183, H.188, G.191, V.192, V.195, F.196, V.273, T.276, A.277, I.280
- Chain D: L.171, L.172, L.194, F.246
- Chain O: F.17
- Ligands: CLA.4, PHO.5, CLA.13, SQD.16, CLA.71, LHG.75
16 PLIP interactions:2 interactions with chain D, 13 interactions with chain A, 1 interactions with chain O,- Hydrophobic interactions: D:L.171, D:L.194, A:F.176, A:Q.177, A:I.182, A:I.182, A:L.183, A:V.192, A:F.196, A:F.196, A:T.276, A:I.280, O:F.17
- Hydrogen bonds: A:T.276
- Water bridges: A:G.279
- Metal complexes: A:H.188
CLA.4: 31 residues within 4Å:- Chain A: L.183, H.188, Q.189, V.192, A.193, F.196, G.197, L.200, F.201, F.250, W.268
- Chain D: F.62, L.63, V.141, F.142, V.145, F.146, F.162, V.164, I.167, F.168, F.170, L.171
- Chain F: L.15
- Ligands: CLA.3, PHO.6, PL9.11, LHG.15, DGD.64, CLA.71, LMG.74
10 PLIP interactions:5 interactions with chain A, 4 interactions with chain D, 1 Ligand-Water interactions- Hydrophobic interactions: A:V.192, A:F.196, A:L.200, A:W.268, D:F.168, D:F.170, D:L.171, D:L.171
- pi-Stacking: A:F.196
- Metal complexes: H2O.5
CLA.7: 29 residues within 4Å:- Chain A: V.25, I.26, P.29, T.30, F.83, Y.84, P.85, I.86, W.87, Q.103, L.104, F.107, H.108, L.111
- Chain H: L.4, T.7, V.8, Y.9, V.11, V.12, T.13, F.15, V.16, L.17
- Ligands: BCR.8, LMG.12, DGD.17, CLA.51, UNL.85
20 PLIP interactions:13 interactions with chain A, 7 interactions with chain H,- Hydrophobic interactions: A:I.26, A:P.29, A:T.30, A:F.83, A:I.86, A:W.87, A:W.87, A:L.104, A:F.107, A:L.111, H:Y.9, H:V.11, H:V.12, H:V.12, H:T.13, H:F.15, H:F.15
- Hydrogen bonds: A:I.86
- Salt bridges: A:H.108
- Metal complexes: A:H.108
CLA.13: 34 residues within 4Å:- Chain A: T.35, F.38, V.39, I.68, F.109, S.143, A.144, V.147, F.148, M.162, I.166, T.169, F.170, F.172, M.173
- Chain D: T.181, H.186, M.187, V.190, A.191, L.194, G.195, L.198
- Chain K: L.30
- Chain O: F.10, I.14, F.17
- Ligands: CLA.3, PHO.5, SQD.16, CLA.71, LHG.75, PL9.76, LHG.87
6 PLIP interactions:1 interactions with chain D, 4 interactions with chain A, 1 Ligand-Water interactions,- Hydrophobic interactions: D:V.190, A:F.38, A:V.147, A:F.148, A:F.172
- Metal complexes: H2O.3
CLA.19: 15 residues within 4Å:- Chain B: W.184, G.185, P.186, F.189, A.203
- Chain G: F.40, I.43, I.44, I.47, L.54
- Chain R: T.1
- Ligands: CLA.20, UNL.43, BCR.82, UNL.84
8 PLIP interactions:4 interactions with chain B, 3 interactions with chain G, 1 Ligand-Water interactions,- Hydrophobic interactions: B:W.184, B:P.186, B:F.189, B:F.189, G:F.40, G:F.40, G:L.54
- Metal complexes: H2O.7
CLA.20: 34 residues within 4Å:- Chain B: E.183, W.184, G.188, F.189, P.191, G.196, V.197, A.199, H.200, A.203, A.204, V.207, F.245, F.246, F.249, V.250, T.254
- Chain D: V.143, L.147, I.148, L.151
- Chain G: F.37, F.40, L.41, I.44, L.45, Y.48
- Ligands: CLA.19, CLA.21, CLA.23, CLA.26, CLA.27, BCR.82, DGD.83
17 PLIP interactions:10 interactions with chain B, 5 interactions with chain G, 2 interactions with chain D,- Hydrophobic interactions: B:W.184, B:F.189, B:A.199, B:A.204, B:V.207, B:F.245, B:F.246, B:F.249, G:F.37, G:F.40, G:I.44, G:L.45, D:L.147, D:I.148
- pi-Stacking: B:F.189, G:F.40
- Metal complexes: B:H.200
CLA.21: 30 residues within 4Å:- Chain B: R.67, L.68, A.145, L.148, C.149, F.152, L.157, M.165, V.197, H.200, H.201, A.204, A.243, F.246, A.247, V.250, V.251, T.261
- Chain G: M.34, F.37, L.38, L.41
- Ligands: CLA.20, CLA.22, CLA.23, CLA.24, CLA.26, CLA.27, CLA.28, BCR.82
17 PLIP interactions:13 interactions with chain B, 4 interactions with chain G,- Hydrophobic interactions: B:L.148, B:F.152, B:F.152, B:F.152, B:F.246, B:A.247, B:V.250, B:V.251, G:F.37, G:F.37, G:L.38, G:L.41
- Hydrogen bonds: B:R.67, B:R.67
- Salt bridges: B:R.67
- pi-Cation interactions: B:H.200
- Metal complexes: B:H.201
CLA.22: 30 residues within 4Å:- Chain B: W.32, F.60, V.61, F.64, R.67, L.144, L.147, L.148, V.244, F.245, A.247, A.248, V.251, M.255, F.450, H.454, F.457, A.458, F.461
- Ligands: CLA.21, CLA.23, CLA.24, CLA.25, CLA.28, CLA.29, CLA.30, CLA.31, CLA.33, BCR.36, UNL.39
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:W.32, B:F.60, B:F.64, B:F.64, B:L.144, B:V.244, B:A.247, B:A.248, B:V.251, B:F.457, B:F.457, B:F.457, B:F.461, B:F.461
- Salt bridges: B:R.67
- Metal complexes: B:H.454
CLA.23: 36 residues within 4Å:- Chain B: T.26, V.29, A.30, W.32, A.33, G.34, A.37, V.61, F.64, M.65, R.67, L.68, V.70, V.95, H.99, L.102, L.106, L.142, A.145, G.146, C.149, A.204, G.205, V.207, G.208
- Ligands: CLA.20, CLA.21, CLA.22, CLA.24, CLA.27, CLA.28, CLA.30, CLA.31, CLA.33, BCR.37, UNL.39
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:T.26, B:A.30, B:W.32, B:A.33, B:L.68, B:V.95, B:L.102, B:L.142
- Hydrogen bonds: B:M.65
- Water bridges: B:R.67
- Salt bridges: B:R.67
- Metal complexes: B:H.99
CLA.24: 27 residues within 4Å:- Chain B: M.65, L.68, G.69, V.70, F.89, W.90, V.95, L.97, A.98, H.99, V.101, L.102, L.105, L.148, G.151, F.152, F.155, H.156, F.161, G.162, P.163
- Ligands: CLA.21, CLA.22, CLA.23, BCR.37, UNL.39, SQD.110
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:L.68, B:F.89, B:F.89, B:W.90, B:W.90, B:L.97, B:A.98, B:V.101, B:L.148, B:F.155, B:F.161, B:F.161
- Salt bridges: B:H.99
- Metal complexes: B:H.156
CLA.25: 40 residues within 4Å:- Chain B: W.32, M.36, Y.39, E.40, T.43, Q.57, G.58, M.59, F.60, L.323, F.324, T.326, G.327, P.328, P.446, W.449, F.450, F.452, A.453, H.454, F.457
- Chain D: F.185, M.188, F.262, T.266, M.270
- Chain K: L.23, L.27, F.31, F.35
- Chain L: F.14
- Ligands: CLA.22, CLA.31, BCR.35, BCR.36, LMG.38, LHG.41, UNL.44, PL9.76, BCR.184
18 PLIP interactions:14 interactions with chain B, 2 interactions with chain K, 1 interactions with chain L, 1 Ligand-Water interactions,- Hydrophobic interactions: B:Y.39, B:F.60, B:F.60, B:F.60, B:F.324, B:F.324, B:P.446, B:W.449, B:W.449, B:A.453, K:L.27, K:F.31, L:F.14
- Hydrogen bonds: B:Y.39, B:G.327
- Water bridges: B:W.449
- pi-Stacking: B:F.60
- Metal complexes: H2O.13
CLA.26: 36 residues within 4Å:- Chain B: L.228, T.235, S.238, S.239, A.242, A.243, F.245, F.246, F.462, H.465, I.466, G.469, A.470, T.472, L.473
- Chain D: L.25, L.78, L.105, F.109, I.112, M.115, L.116, F.119, I.139
- Chain G: L.38, L.42, L.45, E.46
- Ligands: CLA.20, CLA.21, CLA.27, CLA.28, LMG.40, CLA.72, DGD.83, UNL.94
15 PLIP interactions:6 interactions with chain D, 8 interactions with chain B, 1 interactions with chain G,- Hydrophobic interactions: D:L.25, D:F.109, D:I.112, D:M.115, D:L.116, D:I.139, B:A.242, B:F.245, B:F.246, B:F.462, B:F.462, B:I.466, G:L.42
- Hydrogen bonds: B:S.238
- Metal complexes: B:H.465
CLA.27: 37 residues within 4Å:- Chain B: F.138, L.142, V.207, I.210, A.211, F.214, H.215, V.218, R.219, P.220, P.221, L.224, L.228, M.230, F.246
- Chain D: F.109, I.112
- Chain G: T.26, T.27, L.29, M.30, F.33, M.34, L.38, L.41, L.42, L.45
- Ligands: CLA.20, CLA.21, CLA.23, CLA.26, CLA.28, LMG.40, LMG.78, BCR.82, DGD.83, UNL.84
16 PLIP interactions:5 interactions with chain G, 10 interactions with chain B, 1 interactions with chain D,- Hydrophobic interactions: G:M.30, G:F.33, G:L.38, G:L.41, B:F.138, B:F.138, B:F.138, B:V.207, B:A.211, B:F.214, B:F.214, B:L.224, D:F.109
- Hydrogen bonds: G:T.26
- Salt bridges: B:H.215
- Metal complexes: B:H.215
CLA.28: 28 residues within 4Å:- Chain B: L.18, H.22, L.134, P.135, M.137, F.138, H.141, L.142, L.144, A.145, L.148, L.228, M.230, I.233, T.235, V.236, S.239, S.240, A.243, V.244
- Ligands: CLA.21, CLA.22, CLA.23, CLA.26, CLA.27, CLA.30, CLA.33, BCR.82
9 PLIP interactions:8 interactions with chain B, 1 Ligand-Water interactions,- Hydrophobic interactions: B:L.134, B:M.137, B:F.138, B:L.144, B:A.145, B:L.228, B:I.233, B:T.235
- Metal complexes: H2O.8
CLA.29: 26 residues within 4Å:- Chain B: W.4, Y.5, R.6, V.7, H.8, T.9, I.12, L.237, I.241, F.457, L.460, F.461, F.463, G.464, W.467, H.468, R.471, F.478
- Chain L: F.21
- Ligands: CLA.22, CLA.30, CLA.31, CLA.32, BCR.36, LHG.41, LHG.87
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:W.4, B:W.4, B:T.9, B:L.237, B:L.237, B:I.241, B:F.461, B:F.463
- Hydrogen bonds: B:H.8, B:W.467
- Salt bridges: B:H.8, B:R.471
- pi-Stacking: B:W.467
- Metal complexes: B:H.468
CLA.30: 26 residues within 4Å:- Chain B: H.8, T.9, L.11, I.12, L.18, A.21, H.22, H.25, T.26, V.29, I.233, E.234, V.236, L.237, S.240, I.241, V.244, A.247, F.461
- Ligands: CLA.22, CLA.23, CLA.28, CLA.29, CLA.31, CLA.32, CLA.33
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:H.8, B:L.11, B:L.11, B:L.18, B:H.25, B:V.236
- Hydrogen bonds: B:S.240
- Salt bridges: B:H.22
- Metal complexes: B:H.22
CLA.31: 20 residues within 4Å:- Chain B: H.8, H.25, L.28, V.29, W.32, V.244, F.457, L.460, F.461
- Chain L: F.14
- Ligands: CLA.22, CLA.23, CLA.25, CLA.29, CLA.30, CLA.32, BCR.35, BCR.36, LMG.38, LHG.41
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:V.29, B:W.32, B:W.32, B:L.460, B:F.461
- Salt bridges: B:H.8
- Metal complexes: B:H.25
CLA.32: 29 residues within 4Å:- Chain 5: L.16
- Chain 8: F.8
- Chain B: L.2, V.7, H.8, V.10, L.11, A.21, M.24, H.25, L.28, W.114
- Chain K: Q.8, V.10
- Chain L: L.13, V.17, F.21, L.25
- Ligands: CLA.29, CLA.30, CLA.31, BCR.35, LMG.38, SQD.42, UNL.44, LHG.87, UNL.88, UNL.183, BCR.184
10 PLIP interactions:7 interactions with chain B, 3 interactions with chain L,- Hydrophobic interactions: B:V.7, B:V.7, B:L.11, B:L.28, B:W.114, B:W.114, L:L.13, L:F.21, L:L.25
- Metal complexes: B:H.8
CLA.33: 25 residues within 4Å:- Chain B: L.18, I.19, H.22, L.23, T.26, L.102, L.106, L.121, F.122, L.132, M.137, I.140, H.141, L.144
- Chain G: L.6, L.10, L.13, N.14
- Ligands: CLA.22, CLA.23, CLA.28, CLA.30, CLA.34, BCR.37, UNL.39
9 PLIP interactions:4 interactions with chain G, 5 interactions with chain B,- Hydrophobic interactions: G:L.10, G:L.10, G:L.13, G:L.13, B:I.19, B:L.132, B:I.140, B:L.144
- Metal complexes: B:H.141
CLA.34: 18 residues within 4Å:- Chain B: I.19, L.23, L.106, A.109, W.112, H.113, L.119, L.121, F.122
- Chain G: T.4, W.5, L.6, G.7, L.10
- Ligands: CLA.33, BCR.37, UNL.39, SQD.110
12 PLIP interactions:8 interactions with chain B, 4 interactions with chain G,- Hydrophobic interactions: B:I.19, B:L.23, B:W.112, B:W.112, B:W.112, B:L.119, B:L.121, G:L.6, G:L.10
- Metal complexes: B:H.113
- Hydrogen bonds: G:T.4
- Water bridges: G:W.5
CLA.47: 31 residues within 4Å:- Chain C: T.72, L.73, L.146, G.149, A.150, L.153, L.163, L.191, W.201, I.202, V.205, L.208, V.211, H.215, I.218, C.222, A.256, M.259, M.260, I.263, A.264, F.267, V.274, Y.275
- Ligands: CLA.48, CLA.49, CLA.51, CLA.52, CLA.53, CLA.58, BCR.61
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:L.146, C:A.150, C:L.153, C:I.202, C:I.218, C:I.218, C:A.256, C:M.260, C:F.267, C:V.274
- Hydrogen bonds: C:Y.275
- Metal complexes: C:H.215
CLA.48: 31 residues within 4Å:- Chain C: W.41, I.65, L.66, H.69, L.73, W.75, G.149, L.152, L.153, A.155, K.156, F.160, L.257, S.258, M.260, G.261, A.264, V.268, Y.275, L.404, H.408, L.411, A.412, F.415
- Ligands: CLA.47, CLA.49, CLA.50, CLA.55, CLA.56, CLA.58, LMG.65
17 PLIP interactions:17 interactions with chain C,- Hydrophobic interactions: C:W.41, C:I.65, C:L.73, C:W.75, C:L.152, C:K.156, C:L.257, C:M.260, C:A.264, C:L.404, C:L.411, C:L.411, C:F.415
- Water bridges: C:H.69
- Salt bridges: C:H.69, C:H.408
- Metal complexes: C:H.408
CLA.49: 24 residues within 4Å:- Chain C: A.35, I.38, V.39, W.41, A.42, T.46, L.66, H.69, I.70, L.73, W.75, V.92, H.96, L.152, L.257, M.260
- Ligands: CLA.47, CLA.48, CLA.53, CLA.55, CLA.56, CLA.58, CLA.59, UNL.69
7 PLIP interactions:7 interactions with chain C,- Hydrophobic interactions: C:I.38, C:V.39, C:A.42, C:L.73, C:L.257
- Salt bridges: C:H.69
- Metal complexes: C:H.96
CLA.50: 31 residues within 4Å:- Chain A: F.187, F.275
- Chain C: W.41, M.45, F.48, E.49, H.52, Q.62, G.63, L.64, I.65, L.382, S.384, P.400, W.403, L.404, S.407, H.408, V.410, L.411, F.414
- Chain J: P.17, V.18, V.21
- Ligands: CLA.48, CLA.54, CLA.56, DGD.63, DGD.64, LMG.65, LHG.77
10 PLIP interactions:8 interactions with chain C, 1 interactions with chain J, 1 Ligand-Water interactions,- Hydrophobic interactions: C:W.41, C:F.48, C:F.48, C:I.65, C:W.403, C:W.403, C:W.403, J:V.21
- Water bridges: C:S.384
- Metal complexes: H2O.20
CLA.51: 34 residues within 4Å:- Chain A: F.23, I.26, L.111, S.114, C.115, M.117, G.118, W.121
- Chain C: F.242, I.243, A.248, S.251, Y.252, G.255, A.256, S.258, M.259, L.416, H.419, L.420, A.423, G.424, A.426, R.427
- Chain H: V.12, V.16, F.19, F.23
- Ligands: CLA.7, LMG.12, CLA.47, CLA.53, BCR.61, DGD.62
14 PLIP interactions:9 interactions with chain C, 3 interactions with chain A, 2 interactions with chain H,- Hydrophobic interactions: C:F.242, C:Y.252, C:Y.252, C:L.420, C:A.423, A:F.23, A:W.121, A:W.121, H:F.19, H:F.23
- Water bridges: C:I.243, C:I.243
- Salt bridges: C:R.427
- Metal complexes: C:H.419
CLA.52: 29 residues within 4Å:- Chain C: T.136, L.139, L.143, L.191, L.192, W.201, I.221, C.222, A.224, G.225, G.226, W.228, H.229, T.232, T.233, P.234, F.235, W.237, A.238, F.242, W.244, M.259
- Chain H: V.20, L.24
- Ligands: LMG.12, CLA.47, CLA.53, BCR.61, DGD.62
9 PLIP interactions:9 interactions with chain C,- Hydrophobic interactions: C:L.139, C:L.139, C:L.143, C:L.191, C:I.221, C:W.228
- Hydrogen bonds: C:F.235
- Salt bridges: C:H.229
- Metal complexes: C:H.229
CLA.53: 27 residues within 4Å:- Chain C: K.132, M.135, T.136, I.138, L.139, H.142, L.143, L.146, I.218, I.221, C.222, P.234, W.237, F.242, W.244, Y.249, Y.252, S.253, A.256, L.257, M.260
- Ligands: CLA.47, CLA.49, CLA.51, CLA.52, CLA.55, BCR.61
14 PLIP interactions:13 interactions with chain C, 1 Ligand-Water interactions,- Hydrophobic interactions: C:M.135, C:T.136, C:L.146, C:I.218, C:W.237, C:F.242, C:W.244, C:Y.249, C:Y.249, C:Y.252, C:Y.252, C:A.256
- Salt bridges: C:H.142
- Metal complexes: H2O.15
CLA.54: 31 residues within 4Å:- Chain C: F.11, W.13, W.14, A.15, G.16, N.17, A.18, I.21, E.247, L.250, L.254, L.257, F.414, F.415, V.417, G.418, W.421, H.422, R.425
- Chain J: V.21, L.24, F.28
- Ligands: SQD.14, CLA.50, CLA.55, CLA.56, CLA.57, DGD.63, DGD.64, LMG.65, LHG.77
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:L.250, C:L.250, C:L.254, C:F.415, C:W.421
- Hydrogen bonds: C:N.17, C:N.17, C:W.421
- Salt bridges: C:H.422, C:R.425
- pi-Stacking: C:W.421
- Metal complexes: C:H.422
CLA.55: 30 residues within 4Å:- Chain C: N.17, A.18, L.20, I.21, L.27, A.30, H.31, H.34, I.38, Y.127, W.129, M.135, I.138, H.142, L.146, G.246, E.247, Y.249, L.250, S.253, L.254, L.257, F.415
- Ligands: CLA.48, CLA.49, CLA.53, CLA.54, CLA.56, CLA.57, CLA.58
12 PLIP interactions:12 interactions with chain C,- Hydrophobic interactions: C:N.17, C:I.21, C:L.27, C:A.30, C:H.34, C:Y.127, C:W.129, C:I.138, C:L.146, C:Y.249, C:L.250
- Metal complexes: C:H.31
CLA.56: 21 residues within 4Å:- Chain C: N.17, H.34, L.37, I.38, W.41, L.257, L.411, F.414, F.415
- Chain J: P.20, V.21, F.23, L.24
- Ligands: CLA.48, CLA.49, CLA.50, CLA.54, CLA.55, CLA.57, LMG.65, LHG.77
11 PLIP interactions:9 interactions with chain C, 2 interactions with chain J,- Hydrophobic interactions: C:L.37, C:I.38, C:W.41, C:L.257, C:L.411, C:F.414, C:F.415, J:P.20, J:V.21
- Hydrogen bonds: C:N.17
- Metal complexes: C:H.34
CLA.57: 42 residues within 4Å:- Chain C: W.13, W.14, G.16, N.17, R.19, L.20, L.23, K.26, L.27, A.30, A.33, H.34, L.37, A.101, G.104, F.105, V.108, A.111, I.112
- Chain J: F.23, L.24, L.26, A.27, F.28, W.30, Q.31, R.37
- Chain S: I.19, I.20, L.23, N.29, L.30
- Chain T: M.19, V.20, V.23, P.24, A.28
- Ligands: CLA.54, CLA.55, CLA.56, BCR.66, BCR.95
18 PLIP interactions:3 interactions with chain S, 5 interactions with chain C, 3 interactions with chain T, 7 interactions with chain J,- Hydrophobic interactions: S:I.19, S:I.20, S:L.30, C:A.30, C:F.105, C:A.111, C:I.112, T:V.20, T:P.24, T:A.28, J:F.23, J:L.24, J:A.27, J:W.30
- Hydrogen bonds: C:R.19
- Water bridges: J:R.37
- pi-Stacking: J:W.30, J:W.30
CLA.58: 25 residues within 4Å:- Chain C: L.28, H.31, V.32, A.35, L.103, L.118, F.124, F.125, Y.127, K.134, I.138, F.141, H.142, I.144, V.145, L.146, I.148, G.149, L.152
- Ligands: CLA.47, CLA.48, CLA.49, CLA.55, CLA.59, BCR.60
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:L.28, C:H.31, C:F.124, C:F.124, C:I.138, C:F.141, C:F.141, C:F.141, C:V.145, C:V.145, C:I.148, C:L.152
- Metal complexes: C:H.142
CLA.59: 17 residues within 4Å:- Chain C: L.28, V.32, V.102, L.103, F.105, G.106, Y.109, H.110, G.114, P.115, L.118, Y.121, F.125
- Ligands: CLA.49, CLA.58, BCR.60, UNL.69
13 PLIP interactions:13 interactions with chain C,- Hydrophobic interactions: C:L.28, C:L.28, C:V.32, C:V.32, C:V.102, C:L.103, C:Y.109, C:L.118, C:F.125, C:F.125, C:F.125
- Salt bridges: C:H.110
- Metal complexes: C:H.110
CLA.71: 35 residues within 4Å:- Chain A: M.173, V.195, F.196
- Chain D: L.34, W.37, L.111, F.135, P.138, V.141, F.142, S.144, V.145, F.146, F.170, L.171, L.172, F.174, Q.175, W.180, T.181, H.186, G.189, V.190, V.193, L.194, L.268, S.271, A.272, V.275
- Ligands: CLA.3, CLA.4, PHO.6, PL9.11, CLA.13, LMG.74
14 PLIP interactions:14 interactions with chain D,- Hydrophobic interactions: D:W.37, D:L.111, D:V.141, D:F.142, D:F.170, D:L.171, D:F.174, D:Q.175, D:V.190, D:V.193, D:L.268
- Hydrogen bonds: D:W.180
- pi-Stacking: D:W.180
- Metal complexes: D:H.186
CLA.72: 33 residues within 4Å:- Chain D: I.24, L.25, P.28, C.29, L.32, L.78, L.79, L.80, L.81, W.82, W.93, G.98, T.101, F.102, L.105, H.106, F.109
- Chain G: G.35, L.38, V.39, L.42
- Chain R: G.12, L.13, L.14, G.16, A.17, V.19, L.20
- Ligands: PL9.11, CLA.26, BCR.73, SQD.80, UNL.94
16 PLIP interactions:1 interactions with chain G, 10 interactions with chain D, 5 interactions with chain R,- Hydrophobic interactions: G:L.42, D:L.25, D:L.32, D:W.82, D:W.82, D:L.105, R:L.13, R:L.14, R:A.17, R:V.19, R:L.20
- Hydrogen bonds: D:L.81
- Water bridges: D:W.82
- Salt bridges: D:H.106
- pi-Stacking: D:F.102
- Metal complexes: D:H.106
CLA.98: 35 residues within 4Å:- Chain 8: F.17
- Chain U: F.109, A.113, Y.137, P.140, L.141, S.143, A.144, A.146, V.147, F.172, M.173, I.174, F.176, Q.177, I.182, L.183, H.188, G.191, V.192, V.195, F.196, V.273, T.276, A.277, I.280
- Chain X: L.171, L.172, L.194, F.246
- Ligands: CLA.99, PHO.100, CLA.107, CLA.162, LHG.167
17 PLIP interactions:14 interactions with chain U, 2 interactions with chain X, 1 interactions with chain 8,- Hydrophobic interactions: U:F.109, U:P.140, U:F.172, U:F.176, U:Q.177, U:I.182, U:I.182, U:L.183, U:L.183, U:V.192, U:F.196, U:F.196, X:L.171, X:L.194, 8:F.17
- Hydrogen bonds: U:T.276
- Metal complexes: U:H.188
CLA.99: 32 residues within 4Å:- Chain U: L.183, H.188, Q.189, V.192, A.193, F.196, G.197, L.200, F.201, F.250, W.268
- Chain X: L.34, F.62, L.63, V.141, F.142, V.145, F.146, F.162, V.164, I.167, F.168, F.170, L.171
- Chain Z: L.15
- Ligands: CLA.98, PL9.106, LHG.109, DGD.155, PHO.161, CLA.162, LMG.166
10 PLIP interactions:4 interactions with chain U, 4 interactions with chain X, 1 interactions with chain Z, 1 Ligand-Water interactions,- Hydrophobic interactions: U:V.192, U:L.200, U:W.268, X:F.146, X:F.146, X:L.171, X:L.171, Z:L.15
- pi-Stacking: U:F.196
- Metal complexes: H2O.47
CLA.101: 29 residues within 4Å:- Chain 1: L.4, I.6, V.8, Y.9, I.10, V.11, V.12, T.13, F.15, V.16, L.17
- Chain U: V.25, I.26, P.29, T.30, F.83, Y.84, P.85, I.86, W.87, Q.103, L.104, F.107, H.108, L.111
- Ligands: BCR.102, DGD.111, CLA.142, LMG.159
17 PLIP interactions:11 interactions with chain U, 6 interactions with chain 1,- Hydrophobic interactions: U:P.29, U:T.30, U:F.83, U:I.86, U:W.87, U:W.87, U:L.104, U:F.107, 1:V.8, 1:Y.9, 1:V.12, 1:T.13, 1:F.15, 1:F.15
- Hydrogen bonds: U:I.86
- Salt bridges: U:H.108
- Metal complexes: U:H.108
CLA.107: 33 residues within 4Å:- Chain 4: L.30
- Chain 8: F.10, I.14, F.17
- Chain U: T.35, F.38, V.39, I.68, F.109, S.143, A.144, V.147, F.148, M.162, I.166, T.169, F.170, F.172, M.173
- Chain X: T.181, H.186, M.187, V.190, A.191, L.194, G.195, L.198
- Ligands: CLA.98, PHO.100, CLA.162, LHG.167, PL9.168, LHG.180
9 PLIP interactions:5 interactions with chain U, 2 interactions with chain X, 1 interactions with chain 8, 1 Ligand-Water interactions,- Hydrophobic interactions: U:T.35, U:V.147, U:F.148, U:F.170, U:F.172, X:V.190, X:L.198, 8:I.14
- Metal complexes: H2O.45
CLA.115: 34 residues within 4Å:- Chain 0: F.37, F.40, L.41, I.44, L.45, Y.48
- Chain V: E.183, W.184, G.188, F.189, P.191, G.196, V.197, A.199, H.200, A.203, A.204, V.207, F.245, F.246, F.249, V.250, T.254
- Chain X: V.143, L.147, I.148, L.151
- Ligands: CLA.116, CLA.118, CLA.121, CLA.122, CLA.174, BCR.175, DGD.176
21 PLIP interactions:15 interactions with chain V, 4 interactions with chain 0, 2 interactions with chain X,- Hydrophobic interactions: V:W.184, V:F.189, V:F.189, V:F.189, V:A.199, V:A.204, V:V.207, V:V.207, V:F.246, V:F.249, V:F.249, V:V.250, V:V.250, 0:F.37, 0:I.44, 0:L.45, X:I.148, X:L.151
- Water bridges: V:S.259
- Metal complexes: V:H.200
- pi-Stacking: 0:F.40
CLA.116: 30 residues within 4Å:- Chain 0: M.34, F.37, L.38, L.41
- Chain V: R.67, L.68, A.145, L.148, C.149, F.152, L.157, M.165, V.197, H.200, H.201, A.204, A.243, F.246, A.247, V.250, V.251, T.261
- Ligands: CLA.115, CLA.117, CLA.118, CLA.119, CLA.121, CLA.122, CLA.123, BCR.175
10 PLIP interactions:10 interactions with chain V,- Hydrophobic interactions: V:F.152, V:F.152, V:F.246, V:F.246, V:V.251
- Hydrogen bonds: V:R.67, V:R.67
- Salt bridges: V:R.67
- pi-Cation interactions: V:H.200
- Metal complexes: V:H.201
CLA.117: 30 residues within 4Å:- Chain V: W.32, F.60, V.61, F.64, R.67, L.144, L.147, L.148, V.244, F.245, A.247, A.248, V.251, M.255, F.450, H.454, F.457, A.458, F.461
- Ligands: CLA.116, CLA.118, CLA.119, CLA.120, CLA.123, CLA.124, CLA.125, CLA.126, CLA.128, BCR.131, UNL.133
16 PLIP interactions:16 interactions with chain V,- Hydrophobic interactions: V:W.32, V:F.60, V:F.64, V:L.144, V:L.148, V:L.148, V:V.244, V:A.247, V:A.248, V:F.457, V:F.457, V:F.457, V:F.461, V:F.461
- Salt bridges: V:R.67
- Metal complexes: V:H.454
CLA.118: 36 residues within 4Å:- Chain V: T.26, V.29, A.30, W.32, A.33, A.37, V.61, F.64, M.65, R.67, L.68, V.70, V.95, H.99, L.102, L.106, L.142, A.145, G.146, C.149, A.204, G.205, V.207, G.208, A.247
- Ligands: CLA.115, CLA.116, CLA.117, CLA.119, CLA.122, CLA.123, CLA.125, CLA.126, CLA.128, BCR.132, UNL.133
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:V.29, V:A.30, V:W.32, V:A.33, V:L.68, V:V.95, V:L.102, V:L.142
- Hydrogen bonds: V:M.65
- Water bridges: V:R.67
- Salt bridges: V:R.67
- Metal complexes: V:H.99
CLA.119: 29 residues within 4Å:- Chain V: M.65, L.68, G.69, V.70, F.89, W.90, V.95, L.97, A.98, H.99, V.101, L.102, L.105, L.148, G.151, F.152, F.155, H.156, F.161, G.162, P.163
- Ligands: SQD.16, DGD.17, UNL.85, CLA.116, CLA.117, CLA.118, BCR.132, UNL.133
13 PLIP interactions:13 interactions with chain V,- Hydrophobic interactions: V:L.68, V:V.70, V:F.89, V:W.90, V:W.90, V:L.97, V:V.101, V:L.148, V:F.155, V:F.161, V:F.161
- Salt bridges: V:H.99
- Metal complexes: V:H.156
CLA.120: 38 residues within 4Å:- Chain 4: L.27, F.31, F.35
- Chain 5: F.14
- Chain V: W.32, M.36, Y.39, E.40, T.43, Q.57, G.58, M.59, F.60, L.323, F.324, T.326, G.327, P.328, P.446, W.449, F.450, F.452, A.453, H.454, F.457
- Chain X: F.185, M.188, T.266, M.270
- Ligands: BCR.90, UNL.92, CLA.117, CLA.126, BCR.130, BCR.131, LHG.165, PL9.168, LMG.182
12 PLIP interactions:9 interactions with chain V, 1 interactions with chain 5, 1 interactions with chain 4, 1 Ligand-Water interactions,- Hydrophobic interactions: V:Y.39, V:F.324, V:F.324, V:T.326, V:W.449, 5:F.14, 4:F.31
- Hydrogen bonds: V:Y.39, V:G.327
- Water bridges: V:W.449
- pi-Stacking: V:F.60
- Metal complexes: H2O.53
CLA.121: 35 residues within 4Å:- Chain 0: L.38, L.42, L.45
- Chain V: L.228, T.235, S.238, S.239, A.242, F.245, F.246, F.462, H.465, I.466, G.469, A.470, T.472, L.473
- Chain X: L.25, L.78, L.80, L.105, F.109, I.112, M.115, L.116, F.119, I.139
- Ligands: CLA.115, CLA.116, CLA.122, CLA.123, UNL.135, CLA.163, UNL.171, DGD.176
18 PLIP interactions:9 interactions with chain V, 3 interactions with chain 0, 6 interactions with chain X,- Hydrophobic interactions: V:A.242, V:F.245, V:F.246, V:F.462, V:F.462, V:I.466, V:L.473, 0:L.38, 0:L.42, 0:L.45, X:L.25, X:F.109, X:I.112, X:M.115, X:L.116, X:L.116
- Salt bridges: V:H.465
- Metal complexes: V:H.465
CLA.122: 36 residues within 4Å:- Chain 0: T.26, T.27, L.29, M.30, F.33, M.34, L.38, L.41, L.42, L.45
- Chain V: F.138, L.142, V.207, I.210, A.211, F.214, H.215, V.218, R.219, P.220, P.221, L.224, L.228, M.230, F.246
- Chain X: F.109, I.112
- Ligands: CLA.115, CLA.116, CLA.118, CLA.121, CLA.123, UNL.135, LMG.170, BCR.175, DGD.176
17 PLIP interactions:5 interactions with chain 0, 11 interactions with chain V, 1 interactions with chain X,- Hydrophobic interactions: 0:M.30, 0:F.33, 0:L.42, 0:L.45, V:F.138, V:F.138, V:F.138, V:V.207, V:A.211, V:F.214, V:F.214, V:L.224, V:L.228, X:F.109
- Hydrogen bonds: 0:T.26
- Salt bridges: V:H.215
- Metal complexes: V:H.215
CLA.123: 29 residues within 4Å:- Chain V: L.18, H.22, L.132, L.134, P.135, M.137, F.138, H.141, L.142, L.144, A.145, L.148, L.228, M.230, I.233, T.235, V.236, S.239, S.240, A.243, V.244
- Ligands: CLA.116, CLA.117, CLA.118, CLA.121, CLA.122, CLA.125, CLA.128, BCR.175
6 PLIP interactions:5 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: V:L.134, V:F.138, V:H.141, V:L.144, V:T.235
- Metal complexes: H2O.48
CLA.124: 26 residues within 4Å:- Chain 5: F.21
- Chain V: W.4, Y.5, R.6, V.7, H.8, T.9, I.12, L.237, I.241, F.457, L.460, F.461, F.463, G.464, W.467, H.468, R.471, F.478
- Ligands: CLA.117, CLA.125, CLA.126, CLA.127, BCR.131, LHG.165, LHG.180
17 PLIP interactions:17 interactions with chain V,- Hydrophobic interactions: V:W.4, V:W.4, V:V.7, V:T.9, V:L.237, V:L.237, V:I.241, V:F.457, V:F.461, V:F.463, V:W.467
- Hydrogen bonds: V:H.8, V:W.467
- Salt bridges: V:H.8, V:R.471
- pi-Stacking: V:W.467
- Metal complexes: V:H.468
CLA.125: 25 residues within 4Å:- Chain V: H.8, T.9, L.11, I.12, L.18, A.21, H.22, H.25, T.26, V.29, I.233, E.234, V.236, L.237, S.240, I.241, V.244, A.247
- Ligands: CLA.117, CLA.118, CLA.123, CLA.124, CLA.126, CLA.127, CLA.128
14 PLIP interactions:14 interactions with chain V,- Hydrophobic interactions: V:H.8, V:L.11, V:L.11, V:I.12, V:H.22, V:H.25, V:I.233, V:I.233, V:V.236, V:L.237, V:L.237
- Hydrogen bonds: V:S.240
- Salt bridges: V:H.22
- Metal complexes: V:H.22
CLA.126: 21 residues within 4Å:- Chain 5: F.14
- Chain V: H.8, H.25, L.28, V.29, W.32, V.244, F.457, L.460, F.461
- Ligands: CLA.117, CLA.118, CLA.120, CLA.124, CLA.125, CLA.127, BCR.130, BCR.131, LHG.165, LHG.180, LMG.182
8 PLIP interactions:7 interactions with chain V, 1 interactions with chain 5,- Hydrophobic interactions: V:V.29, V:W.32, V:W.32, V:F.461, V:F.461, 5:F.14
- Salt bridges: V:H.8
- Metal complexes: V:H.25
CLA.127: 29 residues within 4Å:- Chain 4: Q.8, V.10
- Chain 5: L.13, V.17, F.21, L.25
- Chain L: L.16
- Chain O: F.8
- Chain V: L.2, V.7, H.8, V.10, L.11, A.21, M.24, H.25, L.28, W.114
- Ligands: UNL.89, BCR.90, UNL.92, SQD.114, CLA.124, CLA.125, CLA.126, BCR.130, LHG.180, UNL.181, LMG.182
8 PLIP interactions:3 interactions with chain 5, 5 interactions with chain V,- Hydrophobic interactions: 5:L.13, 5:F.21, 5:L.25, V:V.7, V:L.11, V:L.28, V:W.114
- Metal complexes: V:H.8
CLA.128: 24 residues within 4Å:- Chain 0: L.6, L.10, L.13, N.14
- Chain V: L.18, I.19, H.22, L.23, T.26, L.102, L.106, L.121, F.122, L.132, M.137, I.140, H.141, L.144
- Ligands: CLA.117, CLA.118, CLA.123, CLA.125, CLA.129, BCR.132
9 PLIP interactions:4 interactions with chain 0, 5 interactions with chain V,- Hydrophobic interactions: 0:L.6, 0:L.10, 0:L.13, 0:L.13, V:I.19, V:L.132, V:I.140, V:L.144
- Metal complexes: V:H.141
CLA.129: 16 residues within 4Å:- Chain 0: T.4, L.6, G.7, L.10
- Chain V: I.19, L.23, L.106, A.109, W.112, H.113, L.119, L.121, F.122
- Ligands: SQD.16, CLA.128, BCR.132
12 PLIP interactions:4 interactions with chain 0, 8 interactions with chain V,- Hydrophobic interactions: 0:L.6, 0:L.10, V:I.19, V:L.23, V:W.112, V:W.112, V:W.112, V:L.119, V:L.121
- Hydrogen bonds: 0:T.4
- Water bridges: 0:W.5
- Metal complexes: V:H.113
CLA.138: 30 residues within 4Å:- Chain W: T.72, L.73, L.146, G.149, A.150, L.153, L.163, W.201, I.202, V.205, L.208, V.211, H.215, I.218, C.222, A.256, M.259, M.260, I.263, A.264, F.267, V.274, Y.275
- Ligands: CLA.139, CLA.140, CLA.142, CLA.143, CLA.144, CLA.149, BCR.152
11 PLIP interactions:11 interactions with chain W,- Hydrophobic interactions: W:L.153, W:W.201, W:I.218, W:I.218, W:I.218, W:A.256, W:M.260, W:F.267, W:V.274
- Hydrogen bonds: W:Y.275
- Metal complexes: W:H.215
CLA.139: 32 residues within 4Å:- Chain W: W.41, I.65, L.66, H.69, L.73, W.75, G.149, L.152, L.153, A.155, K.156, F.160, L.257, S.258, M.260, G.261, A.264, T.265, V.268, Y.275, L.404, H.408, L.411, A.412, F.415
- Ligands: CLA.138, CLA.140, CLA.141, CLA.146, CLA.147, CLA.149, LMG.156
15 PLIP interactions:15 interactions with chain W,- Hydrophobic interactions: W:I.65, W:L.66, W:L.73, W:A.155, W:K.156, W:L.257, W:M.260, W:A.264, W:L.404, W:L.411, W:F.415
- Water bridges: W:H.69
- Salt bridges: W:H.69, W:H.408
- Metal complexes: W:H.408
CLA.140: 25 residues within 4Å:- Chain W: A.35, I.38, V.39, W.41, A.42, T.46, L.66, H.69, I.70, L.73, W.75, V.92, H.96, L.103, L.152, L.257, M.260
- Ligands: CLA.138, CLA.139, CLA.144, CLA.146, CLA.147, CLA.149, CLA.150, UNL.157
6 PLIP interactions:6 interactions with chain W,- Hydrophobic interactions: W:V.39, W:A.42, W:L.73, W:L.257
- Salt bridges: W:H.69
- Metal complexes: W:H.96
CLA.141: 31 residues within 4Å:- Chain 3: P.17, V.18, P.20, V.21
- Chain U: F.187, F.275
- Chain W: W.41, M.45, F.48, E.49, H.52, Q.62, G.63, L.64, I.65, L.382, P.400, W.403, L.404, S.407, H.408, V.410, L.411, F.414
- Ligands: CLA.139, CLA.145, CLA.147, DGD.154, DGD.155, LMG.156, LHG.169
8 PLIP interactions:6 interactions with chain W, 1 interactions with chain 3, 1 Ligand-Water interactions,- Hydrophobic interactions: W:I.65, W:I.65, W:W.403, W:W.403, W:W.403, W:V.410, 3:V.21
- Metal complexes: H2O.59
CLA.142: 34 residues within 4Å:- Chain 1: V.12, V.16, F.19, F.23
- Chain U: F.23, I.26, L.111, S.114, C.115, M.117, G.118, W.121
- Chain W: F.242, I.243, A.248, S.251, Y.252, G.255, A.256, S.258, M.259, L.416, H.419, L.420, A.423, G.424, A.426, R.427
- Ligands: CLA.101, CLA.138, CLA.144, BCR.152, DGD.153, LMG.159
15 PLIP interactions:9 interactions with chain W, 3 interactions with chain 1, 3 interactions with chain U,- Hydrophobic interactions: W:Y.252, W:Y.252, W:L.416, W:L.420, W:A.423, 1:V.12, 1:V.16, 1:F.23, U:W.121, U:W.121, U:W.121
- Water bridges: W:I.243, W:I.243
- Salt bridges: W:R.427
- Metal complexes: W:H.419
CLA.143: 26 residues within 4Å:- Chain 1: V.20, L.24
- Chain W: T.136, L.139, L.143, L.191, L.192, W.201, I.221, C.222, A.224, G.225, W.228, H.229, T.232, T.233, P.234, F.235, W.237, A.238, F.242, W.244
- Ligands: CLA.138, CLA.144, BCR.152, LMG.159
8 PLIP interactions:8 interactions with chain W,- Hydrophobic interactions: W:L.143, W:L.143, W:L.192, W:I.221, W:W.228
- Hydrogen bonds: W:F.235
- Salt bridges: W:H.229
- Metal complexes: W:H.229
CLA.144: 27 residues within 4Å:- Chain W: K.132, M.135, T.136, I.138, L.139, H.142, L.143, L.146, I.218, I.221, C.222, P.234, W.237, F.242, W.244, Y.249, Y.252, S.253, A.256, L.257, M.260
- Ligands: CLA.138, CLA.140, CLA.142, CLA.143, CLA.146, BCR.152
13 PLIP interactions:12 interactions with chain W, 1 Ligand-Water interactions,- Hydrophobic interactions: W:M.135, W:T.136, W:L.146, W:W.237, W:F.242, W:F.242, W:W.244, W:Y.249, W:Y.249, W:Y.252, W:Y.252, W:A.256
- Metal complexes: H2O.55
CLA.145: 29 residues within 4Å:- Chain 3: L.24, F.28
- Chain W: F.11, W.13, W.14, A.15, G.16, N.17, A.18, I.21, E.247, L.250, L.254, F.414, F.415, V.417, G.418, W.421, H.422, R.425
- Ligands: SQD.108, CLA.141, CLA.146, CLA.147, CLA.148, DGD.154, DGD.155, LMG.156, LHG.169
10 PLIP interactions:10 interactions with chain W,- Hydrophobic interactions: W:A.15, W:L.254, W:F.415, W:W.421
- Hydrogen bonds: W:N.17, W:W.421
- Salt bridges: W:H.422, W:R.425
- pi-Stacking: W:W.421
- Metal complexes: W:H.422
CLA.146: 30 residues within 4Å:- Chain W: N.17, A.18, L.20, I.21, L.27, A.30, H.31, H.34, I.38, Y.127, W.129, M.135, I.138, H.142, L.146, G.246, E.247, Y.249, L.250, S.253, L.254, L.257, F.415
- Ligands: CLA.139, CLA.140, CLA.144, CLA.145, CLA.147, CLA.148, CLA.149
11 PLIP interactions:11 interactions with chain W,- Hydrophobic interactions: W:N.17, W:I.21, W:L.27, W:A.30, W:H.34, W:W.129, W:W.129, W:H.142, W:Y.249
- Hydrogen bonds: W:S.253
- Metal complexes: W:H.31
CLA.147: 21 residues within 4Å:- Chain 3: P.20, V.21, F.23, L.24
- Chain W: N.17, H.34, L.37, I.38, W.41, L.257, L.411, F.414, F.415
- Ligands: CLA.139, CLA.140, CLA.141, CLA.145, CLA.146, CLA.148, LMG.156, LHG.169
12 PLIP interactions:11 interactions with chain W, 1 interactions with chain 3,- Hydrophobic interactions: W:L.37, W:I.38, W:I.38, W:W.41, W:W.41, W:L.257, W:F.414, W:F.415, W:F.415, 3:P.20
- Hydrogen bonds: W:N.17
- Metal complexes: W:H.34
CLA.148: 46 residues within 4Å:- Chain 3: F.23, L.24, L.26, A.27, F.28, W.30, Q.31, R.37
- Chain W: T.2, N.3, R.4, W.13, W.14, G.16, N.17, R.19, L.20, L.23, K.26, L.27, G.29, A.30, A.33, H.34, L.37, A.101, G.104, F.105, V.108, A.111, I.112
- Ligands: CLA.145, CLA.146, CLA.147, BCR.178, BCR.179
- Chain c: I.19, I.20, L.23, N.29, L.30
- Chain d: M.19, V.20, V.23, P.24, A.28
20 PLIP interactions:10 interactions with chain W, 2 interactions with chain c, 1 interactions with chain d, 7 interactions with chain 3,- Hydrophobic interactions: W:W.13, W:L.20, W:L.20, W:L.37, W:V.108, W:A.111, W:I.112, c:I.20, c:L.30, d:A.28, 3:F.23, 3:L.24, 3:A.27, 3:W.30, 3:W.30
- Hydrogen bonds: W:R.19
- Water bridges: W:R.4
- Salt bridges: W:R.4
- pi-Stacking: 3:W.30, 3:W.30
CLA.149: 27 residues within 4Å:- Chain W: L.28, H.31, V.32, A.35, L.103, L.118, F.124, F.125, G.126, Y.127, K.134, I.138, F.141, H.142, I.144, V.145, L.146, I.148, G.149, L.152
- Ligands: CLA.138, CLA.139, CLA.140, CLA.146, CLA.150, BCR.151, LMG.158
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:H.31, W:L.118, W:Y.127, W:I.138, W:F.141, W:F.141, W:F.141, W:I.144, W:V.145, W:L.146, W:I.148, W:L.152
- Metal complexes: W:H.142
CLA.150: 17 residues within 4Å:- Chain W: L.28, V.32, V.102, L.103, F.105, G.106, Y.109, H.110, P.115, L.118, Y.121, S.122, F.125
- Ligands: CLA.140, CLA.149, BCR.151, UNL.157
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:L.28, W:L.28, W:V.102, W:Y.109, W:Y.109, W:L.118, W:Y.121, W:F.125, W:F.125, W:F.125, W:F.125
- Water bridges: W:Y.109
- Metal complexes: W:H.110
CLA.162: 35 residues within 4Å:- Chain U: M.173, V.195, F.196
- Chain X: L.34, W.37, L.111, F.135, P.138, V.141, F.142, S.144, V.145, F.146, F.170, L.171, L.172, F.174, Q.175, W.180, T.181, H.186, G.189, V.190, V.193, L.194, L.268, S.271, A.272, V.275
- Ligands: CLA.98, CLA.99, PL9.106, CLA.107, PHO.161, LMG.166
13 PLIP interactions:12 interactions with chain X, 1 interactions with chain U,- Hydrophobic interactions: X:L.34, X:V.141, X:F.170, X:F.174, X:Q.175, X:T.181, X:V.190, X:V.190, X:L.194, X:L.268, U:F.196
- pi-Stacking: X:W.180
- Metal complexes: X:H.186
CLA.163: 35 residues within 4Å:- Chain 0: A.31, V.32, G.35, L.36, L.38, V.39, L.42
- Chain X: I.24, L.25, P.28, C.29, L.32, L.78, L.79, L.80, L.81, W.82, W.93, T.101, F.102, L.105, H.106, F.109
- Ligands: PL9.106, CLA.121, BCR.164, LMG.170, UNL.171, UNL.188
- Chain b: G.12, L.13, G.16, A.17, V.19, L.20
11 PLIP interactions:2 interactions with chain b, 8 interactions with chain X, 1 interactions with chain 0,- Hydrophobic interactions: b:A.17, b:V.19, X:L.32, X:W.82, X:W.82, X:L.105, 0:A.31
- Hydrogen bonds: X:L.81
- Salt bridges: X:H.106
- pi-Stacking: X:F.102
- Metal complexes: X:H.106
CLA.174: 13 residues within 4Å:- Chain 0: F.33, L.36, F.40, I.43, I.47, L.54
- Chain V: W.184, G.185, P.186, F.189, A.203
- Ligands: CLA.115, BCR.175
8 PLIP interactions:3 interactions with chain 0, 4 interactions with chain V, 1 Ligand-Water interactions,- Hydrophobic interactions: 0:F.40, 0:F.40, 0:I.43, V:P.186, V:P.186, V:F.189, V:F.189
- Metal complexes: H2O.48
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.5: 36 residues within 4Å:- Chain A: L.31, A.34, T.35, F.38, I.105, F.109, A.113, Y.116, Q.120, A.136, Y.137, A.139, P.140, F.148, M.162, P.163, L.164, G.165, I.166, T.169, V.195, P.269, V.270, V.273
- Chain D: L.194, A.197, L.198, A.201, I.202, W.242, F.246
- Ligands: CLA.3, CLA.13, SQD.16, LHG.75, PL9.76
14 PLIP interactions:13 interactions with chain A, 1 interactions with chain D- Hydrophobic interactions: A:L.31, A:A.34, A:F.38, A:I.105, A:A.136, A:Y.137, A:Y.137, A:P.140, A:F.148, A:V.273, D:I.202
- Hydrogen bonds: A:Y.116, A:Q.120, A:Y.137
PHO.6: 39 residues within 4Å:- Chain A: F.196, A.199, L.200, F.201, A.203, M.204, S.207, F.245, L.248, I.249
- Chain D: L.26, A.30, A.33, L.34, W.37, I.103, A.104, G.107, G.110, L.111, F.114, Q.118, N.131, A.134, F.135, A.137, P.138, F.142, F.162, G.163, V.164, I.167, V.193, P.264, V.265, L.268
- Ligands: CLA.4, PL9.11, CLA.71
24 PLIP interactions:21 interactions with chain D, 3 interactions with chain A- Hydrophobic interactions: D:A.30, D:W.37, D:W.37, D:W.37, D:I.103, D:L.111, D:F.114, D:F.114, D:F.114, D:A.134, D:F.135, D:F.135, D:P.138, D:F.142, D:F.162, D:V.164, D:P.264, D:L.268, A:F.196, A:L.200, A:A.203
- Hydrogen bonds: D:Q.118, D:N.131
- pi-Stacking: D:F.135
PHO.100: 36 residues within 4Å:- Chain U: L.31, A.34, T.35, F.38, I.105, F.109, A.113, Y.116, Q.120, A.136, Y.137, A.139, P.140, F.148, M.162, P.163, L.164, G.165, I.166, T.169, V.195, P.269, V.270, V.273
- Chain X: L.194, A.197, L.198, A.201, I.202, W.242, F.246
- Ligands: CLA.98, CLA.107, SQD.110, LHG.167, PL9.168
16 PLIP interactions:12 interactions with chain U, 4 interactions with chain X- Hydrophobic interactions: U:L.31, U:A.34, U:F.38, U:I.105, U:A.136, U:Y.137, U:P.140, U:F.148, U:V.273, X:L.194, X:L.198, X:A.201, X:I.202
- Hydrogen bonds: U:Y.116, U:Q.120, U:Y.137
PHO.161: 38 residues within 4Å:- Chain U: F.196, A.199, L.200, F.201, A.203, M.204, F.245, L.248, I.249
- Chain X: L.26, A.30, A.33, L.34, W.37, I.103, G.107, G.110, L.111, F.114, Q.118, N.131, A.134, F.135, A.137, P.138, F.142, F.162, G.163, V.164, I.167, V.193, P.264, V.265, L.268
- Ligands: CLA.99, PL9.106, LHG.109, CLA.162
22 PLIP interactions:21 interactions with chain X, 1 interactions with chain U- Hydrophobic interactions: X:A.30, X:A.33, X:L.34, X:W.37, X:W.37, X:W.37, X:W.37, X:I.103, X:F.114, X:F.114, X:A.134, X:F.135, X:P.138, X:F.142, X:F.162, X:V.164, X:P.264, X:L.268, U:F.196
- Hydrogen bonds: X:Q.118, X:N.131
- pi-Stacking: X:F.135
- 22 x BCR: BETA-CAROTENE(Non-covalent)
BCR.8: 29 residues within 4Å:- Chain A: F.7, W.10, V.20, G.24, V.25, I.28, P.29, L.32, A.33, I.36, C.37, I.40, A.41, A.44, A.45, P.46, I.86, L.92, W.95, L.96, P.101, L.104
- Chain H: F.14, F.15, L.18
- Chain V: W.74
- Ligands: CLA.7, DGD.17, UNL.85
Ligand excluded by PLIPBCR.35: 22 residues within 4Å:- Chain 8: F.19
- Chain B: A.20, A.21, M.24, L.28, F.107, A.110, C.111, W.114
- Chain L: L.6, I.9, A.10, L.13
- Ligands: CLA.25, CLA.31, CLA.32, BCR.36, LMG.38, SQD.42, UNL.44, LHG.87, BCR.184
Ligand excluded by PLIPBCR.36: 24 residues within 4Å:- Chain B: L.28, V.29, G.31, W.32, S.35, I.100, V.101, S.103, G.104, L.105, F.107, L.108, F.457
- Ligands: CLA.22, CLA.25, CLA.29, CLA.31, BCR.35, LMG.38, SQD.42, DGD.111, BCR.184, UNL.185, UNL.186
Ligand excluded by PLIPBCR.37: 19 residues within 4Å:- Chain 8: F.18, F.22, F.23
- Chain B: W.90, L.102, L.105, L.106, L.108, A.109, C.111, W.112, V.115, Y.116
- Ligands: CLA.23, CLA.24, CLA.33, CLA.34, UNL.39, SQD.110
Ligand excluded by PLIPBCR.60: 20 residues within 4Å:- Chain C: F.87, F.90, V.91, V.94, V.95, I.98, S.99, V.102, L.103, F.125
- Chain J: Y.6
- Chain T: V.51, V.54, G.55, N.58, F.59
- Ligands: CLA.58, CLA.59, BCR.66, UNL.69
Ligand excluded by PLIPBCR.61: 25 residues within 4Å:- Chain C: I.187, F.188, Y.190, L.191, I.202, V.205, D.210, V.211, G.214, H.215, W.217, I.218, I.221, A.241, F.242, M.259, F.267
- Chain H: F.19, V.20, F.23, L.24
- Ligands: CLA.47, CLA.51, CLA.52, CLA.53
Ligand excluded by PLIPBCR.66: 35 residues within 4Å:- Chain C: A.30, A.33, H.34, G.36, L.37, F.40, L.47, F.90, V.94, L.97, I.98, S.100, A.101, G.104, V.108, A.111, I.112
- Chain J: Y.6, F.9, L.12, V.13, L.16, F.23, L.26, A.27, W.30
- Chain T: L.9, L.12, V.13, S.16, V.20, W.47
- Ligands: CLA.57, BCR.60, BCR.95
Ligand excluded by PLIPBCR.73: 24 residues within 4Å:- Chain D: Y.31, L.32, G.35, G.36, L.38, T.39, F.90, W.93, L.99, F.102
- Chain F: T.14, L.15, P.18, T.19, F.22, L.23, I.26
- Chain I: V.17, I.20, V.21, F.24
- Ligands: PL9.11, CLA.72, LMG.74
Ligand excluded by PLIPBCR.82: 21 residues within 4Å:- Chain B: P.186, V.207
- Chain G: M.30, F.33, M.34, L.36, F.37, V.39, F.40, I.43, L.54
- Chain R: T.1, I.2, L.6, F.10
- Ligands: CLA.19, CLA.20, CLA.21, CLA.27, CLA.28, UNL.84
Ligand excluded by PLIPBCR.90: 28 residues within 4Å:- Chain A: L.18
- Chain O: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain V: W.32, S.35, M.36, Y.39, F.107, L.108
- Ligands: SQD.16, DGD.17, LHG.75, UNL.91, UNL.92, SQD.114, CLA.120, CLA.127, BCR.130, BCR.131, UNL.136
Ligand excluded by PLIPBCR.95: 31 residues within 4Å:- Chain C: F.40, L.97
- Chain I: W.7, A.10, T.11, G.14, M.15, I.18
- Chain J: L.12, L.16, I.19, L.22, F.23, A.25, L.26, F.28, V.29, A.32, F.36
- Chain S: I.12, G.13, A.15, G.16, P.17
- Chain T: V.13, S.16, F.17, V.20
- Ligands: SQD.14, CLA.57, BCR.66
Ligand excluded by PLIPBCR.102: 30 residues within 4Å:- Chain 1: F.14, F.15, L.18
- Chain B: W.74
- Chain U: F.7, W.10, V.11, V.20, G.24, V.25, I.28, P.29, L.32, A.33, I.36, C.37, I.40, A.41, A.44, A.45, P.46, I.86, L.92, W.95, L.96, P.101, L.104
- Ligands: CLA.101, DGD.111, UNL.112
Ligand excluded by PLIPBCR.130: 22 residues within 4Å:- Chain 5: L.6, I.9, A.10, L.13
- Chain O: F.19
- Chain V: A.20, A.21, M.24, L.28, F.107, A.110, C.111, W.114
- Ligands: BCR.90, UNL.92, SQD.114, CLA.120, CLA.126, CLA.127, BCR.131, LHG.180, LMG.182
Ligand excluded by PLIPBCR.131: 25 residues within 4Å:- Chain V: L.28, V.29, G.31, W.32, S.35, I.100, V.101, S.103, G.104, L.105, F.107, L.108, F.457
- Ligands: DGD.17, BCR.90, UNL.91, SQD.114, CLA.117, CLA.120, CLA.124, CLA.126, BCR.130, UNL.136, LHG.180, LMG.182
Ligand excluded by PLIPBCR.132: 19 residues within 4Å:- Chain O: F.18, F.22, F.23
- Chain V: W.90, L.102, L.105, L.106, L.108, A.109, C.111, W.112, V.115, Y.116
- Ligands: SQD.16, CLA.118, CLA.119, CLA.128, CLA.129, UNL.133
Ligand excluded by PLIPBCR.151: 22 residues within 4Å:- Chain 3: Y.6
- Chain W: F.87, F.90, V.91, V.94, V.95, I.98, S.99, V.102, L.103, F.124, F.125
- Ligands: CLA.149, CLA.150, UNL.157, BCR.179
- Chain d: V.51, L.52, V.54, G.55, N.58, F.59
Ligand excluded by PLIPBCR.152: 25 residues within 4Å:- Chain 1: F.19, V.20, F.23, L.24
- Chain W: I.187, F.188, Y.190, L.191, I.202, V.205, D.210, V.211, G.214, H.215, W.217, I.218, I.221, A.241, F.242, M.259, F.267
- Ligands: CLA.138, CLA.142, CLA.143, CLA.144
Ligand excluded by PLIPBCR.164: 24 residues within 4Å:- Chain 2: V.17, I.20, V.21, F.24
- Chain X: Y.31, L.32, G.35, G.36, L.38, T.39, F.90, W.93, L.99, F.102
- Chain Z: T.14, L.15, P.18, T.19, F.22, L.23, I.26
- Ligands: DGD.154, CLA.163, LMG.166
Ligand excluded by PLIPBCR.175: 20 residues within 4Å:- Chain 0: M.30, F.33, M.34, L.36, F.37, V.39, F.40, I.43, L.54
- Chain V: P.186, V.207
- Ligands: CLA.115, CLA.116, CLA.122, CLA.123, CLA.174
- Chain b: T.1, I.2, L.6, F.10
Ligand excluded by PLIPBCR.178: 32 residues within 4Å:- Chain 2: W.7, A.10, T.11, G.14, M.15, I.18
- Chain 3: L.12, L.16, I.19, L.22, F.23, A.25, L.26, F.28, V.29, A.32, F.36
- Chain W: F.40, L.97
- Ligands: SQD.108, CLA.148, UNL.160, BCR.179
- Chain c: I.12, G.13, A.15, G.16, P.17
- Chain d: V.13, S.16, F.17, V.20
Ligand excluded by PLIPBCR.179: 38 residues within 4Å:- Chain 3: L.2, Y.6, F.9, L.12, V.13, L.16, F.23, L.26, A.27, W.30
- Chain W: A.30, A.33, H.34, G.36, L.37, F.40, L.47, F.90, V.94, L.97, I.98, S.100, A.101, L.103, G.104, V.108, A.111, I.112
- Ligands: CLA.148, BCR.151, BCR.178
- Chain d: L.9, L.12, V.13, S.16, V.20, W.47, V.54
Ligand excluded by PLIPBCR.184: 26 residues within 4Å:- Chain 8: I.4, F.8, A.11, C.12, I.14, A.15, F.17, F.18, I.21, F.22
- Chain B: W.32, S.35, M.36, Y.39, F.107, L.108
- Chain U: L.18
- Ligands: CLA.25, CLA.32, BCR.35, BCR.36, SQD.42, UNL.44, SQD.110, LHG.167, UNL.185
Ligand excluded by PLIP- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.9: 6 residues within 4Å:- Chain A: N.171, V.175, H.322, E.323
- Chain D: K.306, L.310
Ligand excluded by PLIPCL.10: 5 residues within 4Å:- Chain A: H.327, N.328, F.329
- Chain C: G.331, E.332
Ligand excluded by PLIPCL.103: 6 residues within 4Å:- Chain U: N.171, V.175, H.322, E.323
- Chain X: K.306, L.310
Ligand excluded by PLIPCL.104: 5 residues within 4Å:- Chain U: H.327, N.328, F.329
- Chain W: G.331, E.332
Ligand excluded by PLIP- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.11: 35 residues within 4Å:- Chain A: F.201, M.204, H.205, L.208, V.209, Y.236, I.238, A.241, H.242, F.245, I.249, A.253, S.254, F.255, N.256, L.261, F.264, L.265
- Chain D: F.27, P.28, A.30, Y.31, L.32, L.34
- Chain F: V.10, A.11, T.14, L.15
- Ligands: CLA.4, PHO.6, LHG.15, CLA.71, CLA.72, BCR.73, SQD.80
19 PLIP interactions:6 interactions with chain D, 10 interactions with chain A, 3 interactions with chain F- Hydrophobic interactions: D:F.27, D:F.27, D:A.30, D:Y.31, D:Y.31, D:L.34, A:F.201, A:M.204, A:L.208, A:L.208, A:F.245, A:F.245, A:L.261, A:L.261, A:F.264, F:A.11, F:T.14, F:L.15
- Hydrogen bonds: A:F.255
PL9.76: 47 residues within 4Å:- Chain A: F.38, V.39, F.42, I.43, L.61, I.67, I.166
- Chain D: M.187, M.188, A.191, G.192, G.195, L.198, L.199, I.202, H.203, T.206, V.207, Y.233, M.235, A.238, N.239, W.242, F.246, I.248, A.249, F.250, L.256, F.259, F.262, V.263, T.266, G.267, M.270
- Chain K: L.23, V.26, L.27, L.29, L.30
- Chain O: Y.6, V.7, F.10
- Ligands: PHO.5, CLA.13, CLA.25, LHG.75, LHG.87
26 PLIP interactions:14 interactions with chain D, 2 interactions with chain O, 8 interactions with chain A, 2 interactions with chain K- Hydrophobic interactions: D:M.188, D:A.191, D:L.198, D:T.206, D:W.242, D:I.248, D:F.250, D:F.250, D:F.250, D:L.256, D:F.259, D:F.262, D:V.263, O:F.10, O:F.10, A:F.38, A:V.39, A:F.42, A:F.42, A:F.42, A:I.43, A:I.67, A:I.166, K:L.23, K:V.26
- Hydrogen bonds: D:F.250
PL9.106: 45 residues within 4Å:- Chain U: L.200, F.201, M.204, H.205, L.208, V.209, Y.236, I.238, A.241, H.242, F.245, I.249, F.250, A.253, S.254, F.255, N.256, L.261, F.264, L.265
- Chain X: W.10, V.17, V.19, G.23, I.24, F.27, P.28, A.30, Y.31, L.34, F.114
- Chain Z: V.7, V.10, A.11, T.14, L.15
- Ligands: CLA.99, LHG.109, PHO.161, CLA.162, CLA.163, SQD.172
- Chain b: V.19, T.23, L.27
19 PLIP interactions:11 interactions with chain U, 1 interactions with chain b, 4 interactions with chain X, 3 interactions with chain Z- Hydrophobic interactions: U:F.201, U:M.204, U:L.208, U:A.241, U:F.245, U:I.249, U:A.253, U:L.261, U:F.264, b:T.23, X:V.19, X:F.27, X:P.28, X:L.34, Z:A.11, Z:T.14, Z:L.15
- Hydrogen bonds: U:S.254, U:F.255
PL9.168: 47 residues within 4Å:- Chain 4: L.23, V.26, L.27, L.29, L.30
- Chain 8: Y.6, V.7, F.10
- Chain U: F.38, V.39, F.42, I.43, L.61, I.67, I.68, I.166
- Chain X: M.187, M.188, A.191, G.192, G.195, L.198, L.199, I.202, H.203, T.206, Y.233, M.235, A.238, N.239, W.242, F.246, I.248, A.249, F.250, L.256, F.259, F.262, V.263, T.266, G.267, M.270
- Ligands: PHO.100, CLA.107, CLA.120, LHG.167, LHG.180
18 PLIP interactions:1 interactions with chain 8, 2 interactions with chain U, 13 interactions with chain X, 2 interactions with chain 4- Hydrophobic interactions: 8:F.10, U:F.42, U:I.67, X:M.188, X:A.191, X:L.199, X:T.206, X:W.242, X:F.250, X:F.250, X:L.256, X:F.259, X:F.262, X:V.263, 4:L.23, 4:V.26
- Hydrogen bonds: X:F.250
- pi-Stacking: X:F.250
- 13 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.12: 28 residues within 4Å:- Chain A: F.83, P.85, W.87, E.88, F.107, L.110, L.111, S.114, F.145, L.149
- Chain C: L.191, L.192, K.193, S.194, P.195, F.196, E.199, W.201, M.259, F.262, I.263, L.416
- Chain H: K.5, Y.9
- Ligands: CLA.7, CLA.51, CLA.52, DGD.62
13 PLIP interactions:6 interactions with chain C, 4 interactions with chain H, 3 interactions with chain A- Hydrophobic interactions: C:W.201, C:F.262, C:F.262, C:L.416, A:F.145
- Water bridges: C:S.194, C:S.194, H:Y.9
- Hydrogen bonds: H:K.5, H:Y.9, H:Y.9, A:W.87, A:E.88
LMG.38: 29 residues within 4Å:- Chain B: Y.39, T.326, G.327, P.328, K.331, W.449, F.452, A.453, V.456, F.457, L.460
- Chain D: F.185, I.273
- Chain K: F.35
- Chain L: N.4, L.6, G.7, A.10, L.13, F.14, V.17
- Ligands: CLA.25, CLA.31, CLA.32, BCR.35, BCR.36, LHG.41, UNL.44, LHG.87
5 PLIP interactions:1 interactions with chain L, 1 interactions with chain K, 3 interactions with chain B- Hydrogen bonds: L:N.4, B:K.331
- Hydrophobic interactions: K:F.35, B:T.326, B:A.453
LMG.40: 19 residues within 4Å:- Chain B: A.227, L.228, R.229, L.473
- Chain D: W.21, S.22, I.24, L.25, L.116, F.119, E.120, R.123
- Chain G: M.34
- Chain R: L.20, F.24
- Ligands: CLA.26, CLA.27, LMG.78, UNL.94
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain D- Hydrogen bonds: B:R.229
- Hydrophobic interactions: D:W.21, D:L.116, D:E.120
LMG.65: 21 residues within 4Å:- Chain C: F.48, H.52, Q.62, G.63, S.407, L.411
- Chain I: I.18
- Chain J: D.14, V.15, V.18, V.21, L.22
- Chain S: Q.5, I.9
- Ligands: SQD.14, CLA.48, CLA.50, CLA.54, CLA.56, DGD.63, UNL.86
9 PLIP interactions:5 interactions with chain J, 4 interactions with chain C- Hydrophobic interactions: J:V.18, J:V.18, J:V.21, J:L.22, C:L.411
- Hydrogen bonds: J:D.14, C:H.52
- Salt bridges: C:H.52, C:H.52
LMG.74: 28 residues within 4Å:- Chain D: L.34, W.37, L.38, Y.56, G.59, C.60, N.61, F.62
- Chain F: V.12, L.15, A.16, T.19, I.26, M.29, Q.30, I.32
- Chain I: V.21, F.24, F.25, G.27, A.28, L.32, G.33
- Ligands: CLA.4, LHG.15, DGD.64, CLA.71, BCR.73
14 PLIP interactions:6 interactions with chain F, 7 interactions with chain D, 1 interactions with chain I- Hydrophobic interactions: F:L.15, F:A.16, D:L.38, D:F.62, D:F.62
- Hydrogen bonds: F:M.29, F:Q.30, D:G.59, D:F.62, I:L.32
- Water bridges: F:M.29, F:I.32, D:N.61, D:N.61
LMG.78: 19 residues within 4Å:- Chain B: R.223, L.224, A.227, K.497
- Chain D: F.4, D.5, D.8, K.12, W.21, L.124
- Chain G: W.24, T.27, M.30, A.31, M.34, G.35
- Chain R: F.24
- Ligands: CLA.27, LMG.40
8 PLIP interactions:1 interactions with chain G, 1 interactions with chain B, 6 interactions with chain D- Hydrophobic interactions: G:W.24, D:W.21, D:W.21, D:W.21
- Water bridges: B:K.497
- Hydrogen bonds: D:D.8, D:K.12
- Salt bridges: D:K.12
LMG.134: 17 residues within 4Å:- Chain V: F.143, L.147, F.150, A.154, F.155, T.158, L.160, P.179, A.181, P.182, W.184, I.202, I.206, I.209, I.210, L.213
- Ligands: UNL.137
6 PLIP interactions:6 interactions with chain V- Hydrophobic interactions: V:F.150, V:F.150, V:L.160, V:I.206, V:I.209
- Hydrogen bonds: V:W.184
LMG.156: 15 residues within 4Å:- Chain 3: D.14, V.18, V.21
- Chain W: F.48, H.52, Q.62, S.407, L.411
- Ligands: CLA.139, CLA.141, CLA.145, CLA.147, DGD.154, UNL.177
- Chain c: Q.5
6 PLIP interactions:4 interactions with chain W, 1 interactions with chain c, 1 interactions with chain 3- Hydrophobic interactions: W:L.411, 3:V.18
- Hydrogen bonds: W:Q.62, c:Q.5
- Water bridges: W:H.52
- Salt bridges: W:H.52
LMG.158: 13 residues within 4Å:- Chain W: I.144, I.148, L.151, M.158, F.159, T.178, N.179, P.180, L.182, I.216, L.220, I.223
- Ligands: CLA.149
2 PLIP interactions:2 interactions with chain W- Hydrophobic interactions: W:L.220, W:I.223
LMG.159: 28 residues within 4Å:- Chain 1: K.5, Y.9
- Chain U: F.83, P.85, W.87, E.88, F.107, L.110, L.111, S.114, F.145, L.149
- Chain W: L.191, L.192, K.193, S.194, P.195, F.196, E.199, W.201, M.259, F.262, I.263, L.416
- Ligands: CLA.101, CLA.142, CLA.143, DGD.153
12 PLIP interactions:4 interactions with chain U, 7 interactions with chain W, 1 interactions with chain 1- Hydrophobic interactions: U:F.145, W:F.196, W:F.196, W:W.201, W:F.262
- Hydrogen bonds: U:W.87, U:E.88, W:E.199, W:E.199, 1:K.5
- Water bridges: U:E.88, W:S.194
LMG.166: 27 residues within 4Å:- Chain 2: V.21, F.24, F.25, G.27, A.28, L.32, G.33
- Chain X: L.34, W.37, L.38, Y.56, L.57, G.59, C.60, N.61, F.62
- Chain Z: L.15, A.16, T.19, I.26, M.29, Q.30
- Ligands: CLA.99, DGD.154, DGD.155, CLA.162, BCR.164
11 PLIP interactions:2 interactions with chain 2, 7 interactions with chain X, 2 interactions with chain Z- Hydrophobic interactions: 2:F.24, X:F.62, X:F.62
- Hydrogen bonds: 2:L.32, X:Y.56, X:G.59, X:F.62, Z:Q.30, Z:Q.30
- Water bridges: X:N.61, X:N.61
LMG.170: 17 residues within 4Å:- Chain 0: W.24, T.27, M.30, A.31, M.34, G.35
- Chain V: R.223, L.224, A.227
- Chain X: F.4, D.8, K.12, W.21
- Ligands: CLA.122, UNL.135, CLA.163, UNL.171
9 PLIP interactions:2 interactions with chain V, 1 interactions with chain 0, 6 interactions with chain X- Hydrophobic interactions: V:L.224, V:A.227, 0:A.31, X:F.4, X:W.21, X:W.21, X:W.21
- Hydrogen bonds: X:D.8
- Salt bridges: X:K.12
LMG.182: 32 residues within 4Å:- Chain 4: F.35
- Chain 5: N.4, L.6, G.7, A.10, L.13, F.14, V.17
- Chain V: Y.39, F.324, T.326, G.327, P.328, K.331, W.449, F.452, A.453, V.456, F.457, L.460
- Chain X: F.185, M.270, I.273
- Ligands: UNL.91, UNL.92, CLA.120, CLA.126, CLA.127, BCR.130, BCR.131, LHG.165, LHG.180
13 PLIP interactions:1 interactions with chain X, 7 interactions with chain V, 3 interactions with chain 5, 2 interactions with chain 4- Hydrophobic interactions: X:I.273, V:F.452, V:V.456, 5:A.10, 4:F.35, 4:F.35
- Hydrogen bonds: V:Y.39, V:T.326, V:K.331, 5:N.4, 5:N.4
- Water bridges: V:T.326, V:T.326
- 8 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.14: 27 residues within 4Å:- Chain A: L.190, A.193, G.194, F.255, N.257, S.260, F.263, F.264, A.267, W.268, V.271, G.272
- Chain C: A.12, W.13, W.14
- Chain D: S.219, F.221, R.222
- Chain I: I.18
- Chain J: L.24, A.25, F.28
- Ligands: LHG.15, CLA.54, LMG.65, LHG.77, BCR.95
21 PLIP interactions:3 interactions with chain J, 4 interactions with chain D, 10 interactions with chain A, 1 interactions with chain I, 3 interactions with chain C- Hydrophobic interactions: J:A.25, J:F.28, J:F.28, A:L.190, A:A.193, A:F.263, A:F.264, A:W.268, A:W.268, A:V.271, I:I.18, C:W.14
- Hydrogen bonds: D:S.219, A:N.257, A:S.260, C:W.14
- Water bridges: D:F.221, D:R.222, A:N.257, C:W.13
- Salt bridges: D:R.222
SQD.16: 23 residues within 4Å:- Chain A: W.10, N.16, R.17, L.18, V.20, I.28, L.31, L.32, T.35
- Chain O: I.14, F.17, F.22
- Chain V: L.105, L.108
- Ligands: CLA.3, PHO.5, CLA.13, DGD.17, LHG.75, BCR.90, CLA.119, CLA.129, BCR.132
6 PLIP interactions:2 interactions with chain V, 4 interactions with chain A- Hydrophobic interactions: V:L.105, V:L.108, A:V.20, A:L.32
- Hydrogen bonds: A:R.17, A:L.18
SQD.42: 25 residues within 4Å:- Chain 4: R.14, L.17, Y.18, L.21
- Chain 5: Y.26
- Chain 8: F.8, C.12, A.15, L.16, F.19, F.23
- Chain B: R.17, M.24, A.27, L.28, S.103, F.107, W.114
- Chain K: N.4, R.7
- Ligands: CLA.32, BCR.35, BCR.36, UNL.183, BCR.184
11 PLIP interactions:3 interactions with chain 4, 1 interactions with chain 8, 6 interactions with chain B, 1 interactions with chain K- Hydrogen bonds: 4:R.14, 4:R.14, B:W.114
- Salt bridges: 4:R.14, B:R.17, K:R.7
- Hydrophobic interactions: 8:F.19, B:L.28, B:F.107
- Water bridges: B:R.17, B:R.17
SQD.80: 19 residues within 4Å:- Chain D: W.10, R.13, R.15
- Chain F: P.3, F.5, T.6, V.7, V.10
- Chain N: Q.29, L.33
- Chain R: V.19, L.22, T.23, V.26, L.27, I.30, D.34
- Ligands: PL9.11, CLA.72
14 PLIP interactions:4 interactions with chain D, 4 interactions with chain R, 1 interactions with chain E, 1 interactions with chain N, 4 interactions with chain F- Hydrogen bonds: D:R.13, E:E.5, N:Q.29, F:V.7
- Water bridges: D:W.10, D:R.13, R:D.34, R:D.34, F:T.6, F:R.8
- Salt bridges: D:R.15
- Hydrophobic interactions: R:L.22, R:V.26, F:V.7
SQD.108: 29 residues within 4Å:- Chain 2: I.18
- Chain 3: L.24, A.25, F.28
- Chain U: L.190, A.193, G.194, F.255, N.257, S.260, F.263, F.264, A.267, W.268, V.271, G.272, F.275
- Chain W: Q.6, A.12, W.13, W.14
- Chain X: S.219, F.221, R.222
- Ligands: CLA.145, DGD.155, UNL.160, LHG.169, BCR.178
17 PLIP interactions:6 interactions with chain U, 5 interactions with chain W, 2 interactions with chain X, 3 interactions with chain 3, 1 interactions with chain 2- Hydrophobic interactions: U:A.193, U:W.268, U:W.268, U:V.271, W:W.13, W:W.14, 3:A.25, 3:F.28, 3:F.28, 2:I.18
- Hydrogen bonds: U:N.257, U:S.260, W:Q.6, W:W.14, X:S.219
- Water bridges: W:W.13
- Salt bridges: X:R.222
SQD.110: 19 residues within 4Å:- Chain 8: F.22
- Chain B: V.101, L.105, L.108
- Chain U: N.16, R.17, L.18, V.20, I.28, L.31, L.32, T.35
- Ligands: CLA.24, CLA.34, BCR.37, PHO.100, DGD.111, LHG.167, BCR.184
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain U- Hydrophobic interactions: B:L.105, B:L.108, U:I.28, U:L.32
SQD.114: 25 residues within 4Å:- Chain 4: N.4, R.7
- Chain K: R.14, L.17, Y.18, L.21
- Chain L: Y.26
- Chain O: C.12, A.15, L.16, F.19, F.23, R.24
- Chain V: R.17, M.24, A.27, L.28, S.103, F.107, W.114
- Ligands: UNL.89, BCR.90, CLA.127, BCR.130, BCR.131
9 PLIP interactions:4 interactions with chain K, 3 interactions with chain V, 2 interactions with chain O- Hydrophobic interactions: K:Y.18, V:L.28, O:F.19, O:F.19
- Hydrogen bonds: K:R.14, K:R.14, V:W.114
- Salt bridges: K:R.14, V:R.17
SQD.172: 16 residues within 4Å:- Chain 7: Q.29
- Chain X: W.10, R.13, R.15
- Chain Z: P.3, F.5, T.6, V.7, V.10
- Ligands: PL9.106
- Chain b: L.22, T.23, V.26, L.27, I.30, D.34
10 PLIP interactions:6 interactions with chain b, 2 interactions with chain Z, 2 interactions with chain X- Hydrophobic interactions: b:V.26, b:V.26, b:I.30
- Hydrogen bonds: b:D.34, b:D.34, Z:V.7, X:W.10
- Water bridges: b:D.34, Z:R.8
- Salt bridges: X:R.15
- 10 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.15: 27 residues within 4Å:- Chain A: H.242, L.248, I.249, F.250, Q.251, Y.252, A.253, S.254, F.255, N.256, F.264
- Chain D: F.16, V.17, L.26, F.27, F.114, R.117
- Chain E: P.7, F.8, S.9
- Chain F: A.11, V.12, L.15
- Ligands: CLA.4, PL9.11, SQD.14, LMG.74
11 PLIP interactions:6 interactions with chain E, 1 interactions with chain D, 4 interactions with chain A- Hydrophobic interactions: E:F.8, E:F.8, D:V.17, A:F.250, A:Y.252, A:F.255, A:F.255
- Hydrogen bonds: E:F.8, E:S.9, E:S.9, E:S.9
LHG.41: 31 residues within 4Å:- Chain A: S.222, A.223, N.224
- Chain B: W.4, Y.5, R.6, L.460, F.463, W.467, F.478
- Chain D: R.128, Y.130, I.133, W.255, F.258, L.261, F.262, V.265, T.266, W.269, M.270
- Chain K: L.23, I.24, L.27
- Chain L: F.14, P.18
- Ligands: CLA.25, CLA.29, CLA.31, LMG.38, LHG.87
11 PLIP interactions:2 interactions with chain A, 3 interactions with chain D, 5 interactions with chain B, 1 interactions with chain L- Hydrogen bonds: A:S.222, A:N.224, D:R.128, D:Y.130
- Hydrophobic interactions: D:V.265, B:W.4, B:L.460, B:F.463, L:P.18
- Water bridges: B:R.6
- Salt bridges: B:R.6
LHG.75: 36 residues within 4Å:- Chain A: L.18, M.27, Y.116, R.119, N.224
- Chain D: I.245, F.246, G.247, I.248, A.249, F.250, S.251, N.252, W.255, F.259
- Chain K: N.13, T.15, S.16, Y.18, L.19, L.22, V.26, L.29
- Chain O: F.10, I.13, L.16, F.17, A.20, I.21
- Ligands: CLA.3, PHO.5, CLA.13, SQD.16, PL9.76, LHG.87, BCR.90
20 PLIP interactions:9 interactions with chain D, 5 interactions with chain K, 6 interactions with chain O- Hydrophobic interactions: D:I.248, D:F.250, K:Y.18, K:L.22, K:L.29, O:F.17, O:F.17, O:F.17, O:I.21
- Hydrogen bonds: D:S.251, D:S.251, D:S.251, D:S.251, D:N.252, D:W.255, K:N.13, K:S.16
- Water bridges: D:N.252, O:E.25, O:E.25
LHG.77: 30 residues within 4Å:- Chain A: R.130, W.132, I.133, V.135, A.136, F.263, A.266, A.267, V.270, V.271, W.274, F.275
- Chain C: F.11, W.14, A.15, F.414, W.421, R.425
- Chain D: A.205, E.208, N.209, A.218, S.219, T.220, F.221
- Ligands: SQD.14, CLA.50, CLA.54, CLA.56, DGD.64
14 PLIP interactions:4 interactions with chain D, 5 interactions with chain A, 5 interactions with chain C- Hydrogen bonds: D:N.209, D:A.218, D:A.218, D:T.220, C:R.425, C:R.425
- Hydrophobic interactions: A:F.263, A:V.271, A:W.274, A:F.275, C:W.14, C:W.14, C:W.421
- Salt bridges: A:R.130
LHG.87: 33 residues within 4Å:- Chain A: S.222, N.224, Y.225
- Chain B: P.3, W.4, Y.5
- Chain D: A.191, W.255, F.258, F.259, F.262
- Chain K: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23, I.24, V.26
- Chain L: V.17, P.18, F.21, L.22
- Ligands: CLA.13, CLA.29, CLA.32, BCR.35, LMG.38, LHG.41, LHG.75, PL9.76
13 PLIP interactions:2 interactions with chain A, 3 interactions with chain B, 4 interactions with chain K, 2 interactions with chain D, 2 interactions with chain L- Hydrogen bonds: A:S.222, A:N.224, B:W.4, B:W.4, B:Y.5, K:E.11, K:E.11, K:E.11, K:N.13
- Hydrophobic interactions: D:W.255, D:F.262, L:P.18, L:F.21
LHG.109: 21 residues within 4Å:- Chain 2: L.6
- Chain U: L.248, I.249, F.250, Y.252, A.253
- Chain X: F.16, V.17, L.26, F.27, F.114, R.117
- Chain Y: P.7, F.8, S.9
- Chain Z: A.11, V.12, L.15
- Ligands: CLA.99, PL9.106, PHO.161
10 PLIP interactions:3 interactions with chain X, 4 interactions with chain Y, 3 interactions with chain U- Hydrophobic interactions: X:F.16, X:V.17, X:L.26, Y:F.8, Y:F.8, U:I.249, U:F.250, U:F.250
- Hydrogen bonds: Y:F.8, Y:S.9
LHG.165: 31 residues within 4Å:- Chain 4: L.23, I.24, L.27
- Chain 5: F.14, P.18
- Chain U: S.222, A.223, N.224
- Chain V: W.4, Y.5, R.6, L.460, F.463, W.467, F.478
- Chain X: R.128, Y.130, I.133, W.255, F.258, L.261, F.262, V.265, T.266, W.269, M.270
- Ligands: CLA.120, CLA.124, CLA.126, LHG.180, LMG.182
15 PLIP interactions:5 interactions with chain V, 4 interactions with chain X, 5 interactions with chain U, 1 interactions with chain 5- Hydrophobic interactions: V:W.4, V:L.460, V:F.463, X:V.265, X:W.269, 5:P.18
- Water bridges: V:R.6
- Salt bridges: V:R.6
- Hydrogen bonds: X:R.128, X:Y.130, U:S.222, U:A.223, U:N.224, U:N.224, U:N.224
LHG.167: 36 residues within 4Å:- Chain 4: N.13, T.15, S.16, Y.18, L.19, L.22, V.26, L.29
- Chain 8: F.10, I.13, L.16, F.17, A.20, I.21
- Chain U: L.18, M.27, Y.116, R.119, N.224
- Chain X: I.245, F.246, G.247, I.248, A.249, F.250, S.251, N.252, W.255, F.259
- Ligands: CLA.98, PHO.100, CLA.107, SQD.110, PL9.168, LHG.180, BCR.184
15 PLIP interactions:6 interactions with chain 4, 2 interactions with chain 8, 7 interactions with chain X- Hydrophobic interactions: 4:Y.18, 4:L.19, 4:L.22, 4:V.26, 8:A.20, 8:I.21, X:F.246, X:F.250
- Hydrogen bonds: 4:N.13, 4:S.16, X:S.251, X:S.251, X:S.251, X:N.252, X:W.255
LHG.169: 28 residues within 4Å:- Chain U: R.130, W.132, V.135, A.136, F.263, A.266, A.267, V.270, V.271, W.274, F.275
- Chain W: F.11, W.14, A.15, F.414, W.421, R.425
- Chain X: A.205, E.208, N.209, A.218, S.219, T.220, F.221
- Ligands: SQD.108, CLA.141, CLA.145, CLA.147
13 PLIP interactions:4 interactions with chain X, 4 interactions with chain W, 5 interactions with chain U- Hydrogen bonds: X:N.209, X:A.218, X:T.220, X:T.220, W:R.425, W:R.425
- Hydrophobic interactions: W:W.14, W:W.421, U:A.266, U:A.267, U:V.270
- Water bridges: U:R.130
- Salt bridges: U:R.130
LHG.180: 35 residues within 4Å:- Chain 4: E.11, L.12, N.13, S.16, L.19, G.20, L.22, L.23, I.24, V.26
- Chain 5: V.17, P.18, F.21, L.22
- Chain U: S.222, N.224, Y.225
- Chain V: P.3, W.4, Y.5
- Chain X: A.191, W.255, F.258, F.259, F.262
- Ligands: CLA.107, CLA.124, CLA.126, CLA.127, BCR.130, BCR.131, LHG.165, LHG.167, PL9.168, LMG.182
19 PLIP interactions:6 interactions with chain 4, 4 interactions with chain V, 3 interactions with chain 5, 3 interactions with chain U, 3 interactions with chain X- Hydrophobic interactions: 4:L.22, 4:L.23, V:W.4, 5:P.18, 5:F.21, 5:L.22, X:F.259, X:F.262, X:F.262
- Hydrogen bonds: 4:E.11, 4:E.11, 4:E.11, 4:N.13, V:W.4, V:W.4, V:Y.5, U:S.222, U:N.224, U:Y.225
- 10 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.17: 36 residues within 4Å:- Chain A: L.32, I.36, I.40, P.46, Y.63, S.91, L.92, D.93, L.96
- Chain H: M.1, T.3, L.4, T.7, V.11
- Chain M: K.67, Q.107, G.110, G.111
- Chain V: S.73, W.74, S.75, D.86, G.88, F.89, E.93, L.97, V.101, L.105
- Ligands: CLA.7, BCR.8, SQD.16, UNL.85, BCR.90, CLA.119, BCR.131, UNL.136
14 PLIP interactions:7 interactions with chain A, 3 interactions with chain V, 3 interactions with chain M, 1 interactions with chain H- Hydrophobic interactions: A:L.32, A:I.40, V:L.97, H:T.7
- Hydrogen bonds: A:D.93, A:D.93, A:D.93, A:D.93, V:D.86, V:D.86, M:K.67, M:Q.107
- Water bridges: A:L.92, M:R.113
DGD.62: 38 residues within 4Å:- Chain A: L.81, M.117, S.138, L.141, A.142, F.145, L.149, I.150, I.153, F.158
- Chain C: W.167, P.195, F.196, G.197, G.198, E.199, G.200, W.201, V.203, S.204, V.205, N.206, F.262, I.263, C.266, F.270, N.271, N.272, T.273, D.338, F.339, R.340, F.409, F.413, L.416
- Ligands: LMG.12, CLA.51, CLA.52
23 PLIP interactions:6 interactions with chain A, 17 interactions with chain C- Hydrophobic interactions: A:L.141, A:F.145, A:F.145, A:I.150, A:I.153, A:I.153, C:W.201, C:V.203, C:F.262, C:F.262, C:F.262, C:L.416
- Hydrogen bonds: C:G.198, C:E.199, C:N.271, C:N.272, C:T.273, C:T.273, C:D.338, C:R.340, C:R.340
- Water bridges: C:F.270, C:D.338
DGD.63: 28 residues within 4Å:- Chain A: H.185, F.187, T.282, L.287
- Chain C: K.57, E.61, Q.62, G.63, L.382, N.383, S.384, N.396, F.397, V.398, W.403, T.406, S.407, V.410
- Chain I: V.17, I.18, V.21, F.25, Y.29
- Ligands: CLA.50, CLA.54, DGD.64, LMG.65, UNL.86
16 PLIP interactions:12 interactions with chain C, 2 interactions with chain A, 2 interactions with chain I- Hydrophobic interactions: C:L.382, C:W.403, A:F.187, A:L.287
- Hydrogen bonds: C:K.57, C:E.61, C:E.61, C:S.384, C:N.396, C:V.398, C:V.398, C:W.403
- Water bridges: C:G.63, C:G.63, I:Y.29, I:Y.29
DGD.64: 35 residues within 4Å:- Chain A: P.186, F.187, Q.189, L.190, A.193, F.275, F.290, N.291, F.292, S.295
- Chain C: L.382, N.383, S.384, V.385, N.393, S.394, V.395, N.396
- Chain D: N.61, F.62, L.63
- Chain I: F.25, A.28, Y.29, G.33, S.34, S.35, L.36
- Chain Q: Q.34
- Ligands: CLA.4, CLA.50, CLA.54, DGD.63, LMG.74, LHG.77
20 PLIP interactions:8 interactions with chain A, 3 interactions with chain Q, 2 interactions with chain D, 5 interactions with chain C, 2 interactions with chain I- Hydrophobic interactions: A:P.186, A:L.190, A:A.193, A:F.275, A:F.290, A:F.292, D:L.63, D:L.63
- Hydrogen bonds: A:S.295, A:S.295, Q:Q.34, Q:Q.34, Q:Q.34, C:N.383, C:N.393, C:S.394, I:G.33, I:G.33
- Water bridges: C:S.384, C:N.396
DGD.83: 45 residues within 4Å:- Chain B: Y.192, F.245, F.249, V.250, A.252, G.253, T.254, W.256, Y.257, T.270, Y.272, Q.273, S.276, Y.278, T.451, A.455, L.459, F.462
- Chain D: G.75, H.76, L.78, L.105, A.108, F.109, I.112, I.139, V.143, L.147, I.148, L.151, G.152, S.154, W.156, A.279, L.280
- Chain E: R.67
- Chain G: L.45, Y.48, N.49, V.59, S.60, W.61
- Ligands: CLA.20, CLA.26, CLA.27
23 PLIP interactions:10 interactions with chain G, 6 interactions with chain D, 6 interactions with chain B, 1 interactions with chain E- Hydrophobic interactions: G:L.45, G:Y.48, G:Y.48, G:Y.48, D:I.112, D:L.151, D:A.279, D:L.280, B:F.249, B:Y.257, B:T.451, B:F.462
- Hydrogen bonds: G:N.49, G:S.60, G:S.60, G:S.60, G:W.61, G:W.61, D:H.76, D:S.154
- Water bridges: B:T.270, B:T.270, E:R.67
DGD.111: 19 residues within 4Å:- Chain 1: M.1, L.4
- Chain 6: K.67
- Chain B: W.74, F.89, L.97, V.101, L.105
- Chain U: I.36, I.40, I.86, S.91, L.92, D.93, L.96
- Ligands: BCR.36, CLA.101, BCR.102, SQD.110
8 PLIP interactions:3 interactions with chain B, 4 interactions with chain U, 1 interactions with chain 6- Hydrophobic interactions: B:W.74, B:W.74, B:L.97, U:I.40, U:L.92, U:L.92
- Hydrogen bonds: U:D.93
- Salt bridges: 6:K.67
DGD.153: 38 residues within 4Å:- Chain U: L.81, L.111, M.117, L.141, A.142, F.145, L.149, I.150, I.153, F.158
- Chain W: W.167, P.195, F.196, G.197, G.198, E.199, G.200, W.201, V.203, S.204, V.205, N.206, F.262, I.263, C.266, F.270, N.271, N.272, T.273, T.283, D.338, F.339, R.340, F.409, F.413, L.416
- Ligands: CLA.142, LMG.159
22 PLIP interactions:18 interactions with chain W, 4 interactions with chain U- Hydrophobic interactions: W:F.196, W:F.262, W:L.416, U:L.141, U:A.142, U:F.145, U:I.150
- Hydrogen bonds: W:G.198, W:N.272, W:N.272, W:N.272, W:T.273, W:T.273, W:D.338, W:D.338, W:R.340, W:R.340
- Water bridges: W:G.198, W:F.270, W:D.338, W:D.338, W:D.338
DGD.154: 26 residues within 4Å:- Chain 2: F.25, Y.29
- Chain U: H.185, F.187, L.190, T.282, L.287
- Chain W: E.61, Q.62, G.63, L.382, S.384, N.396, F.397, V.398, W.403, T.406, S.407, V.410
- Ligands: CLA.141, CLA.145, DGD.155, LMG.156, BCR.164, LMG.166, UNL.177
10 PLIP interactions:2 interactions with chain U, 8 interactions with chain W- Hydrophobic interactions: U:F.187, U:F.187
- Hydrogen bonds: W:E.61, W:N.396, W:N.396, W:N.396, W:V.398, W:W.403
- Water bridges: W:Q.62, W:G.63
DGD.155: 35 residues within 4Å:- Chain 2: F.25, A.28, Y.29, G.33, S.34, S.35, L.36
- Chain U: P.186, F.187, Q.189, L.190, A.193, F.275, F.290, N.291, F.292, S.295
- Chain W: L.382, N.383, S.384, V.385, N.393, S.394, V.395, N.396
- Chain X: N.61, F.62, L.63
- Ligands: CLA.99, SQD.108, CLA.141, CLA.145, DGD.154, LMG.166
- Chain a: Q.34
19 PLIP interactions:7 interactions with chain U, 6 interactions with chain W, 4 interactions with chain 2, 2 interactions with chain a- Hydrophobic interactions: U:P.186, U:Q.189, U:L.190, U:A.193, U:F.275, U:F.290, 2:F.25
- Hydrogen bonds: U:S.295, W:N.383, W:N.393, W:N.393, W:N.393, W:S.394, W:N.396, 2:A.28, 2:G.33, 2:S.35, a:Q.34, a:Q.34
DGD.176: 46 residues within 4Å:- Chain 0: L.45, Y.48, N.49, V.59, S.60, W.61, K.62
- Chain V: Y.192, F.245, F.249, V.250, A.252, G.253, T.254, W.256, Y.257, T.270, Y.272, Q.273, S.276, Y.278, T.451, A.455, L.459, F.462
- Chain X: G.75, H.76, L.78, L.105, A.108, F.109, I.112, I.139, V.143, L.147, I.148, L.151, G.152, S.154, W.156, V.276, A.279, L.280
- Ligands: CLA.115, CLA.121, CLA.122
18 PLIP interactions:4 interactions with chain X, 9 interactions with chain 0, 5 interactions with chain V- Hydrophobic interactions: X:L.151, X:L.280, 0:L.45, 0:Y.48, 0:Y.48, 0:Y.48, V:A.252, V:Y.257, V:F.462
- Hydrogen bonds: X:H.76, X:S.154, 0:N.49, 0:S.60, 0:W.61, 0:W.61, V:S.276
- Water bridges: 0:S.60, V:Y.192
- 2 x OEY: CA-MN4-O6 CLUSTER(Covalent)
OEY.18: 12 residues within 4Å:- Chain A: D.51, D.160, V.175, E.179, H.322, E.323, H.327, D.332, A.334
- Chain C: E.332, R.335
- Ligands: OEX.1
19 PLIP interactions:5 interactions with chain C, 8 interactions with chain A, 6 Ligand-Water interactions- Hydrogen bonds: C:R.335, C:R.335
- Metal complexes: C:E.332, C:E.332, C:E.332, A:D.160, A:D.160, A:E.179, A:H.322, A:E.323, A:D.332, A:D.332, A:A.334, H2O.2, H2O.2, H2O.4, H2O.4, H2O.5, H2O.5
OEY.113: 14 residues within 4Å:- Chain U: D.51, Y.151, S.159, D.160, V.175, E.179, H.322, E.323, H.327, D.332, A.334
- Chain W: E.332, R.335
- Ligands: OEX.96
26 PLIP interactions:15 interactions with chain U, 5 interactions with chain W, 6 Ligand-Water interactions- Water bridges: U:Y.151, U:Y.151, U:Y.151, U:H.180
- Metal complexes: U:D.160, U:D.160, U:E.179, U:H.322, U:E.323, U:E.323, U:E.323, U:D.332, U:D.332, U:A.334, U:A.334, W:E.332, W:E.332, W:E.332, H2O.43, H2O.43, H2O.44, H2O.44, H2O.46, H2O.47
- Hydrogen bonds: W:R.335, W:R.335
- 31 x UNL: UNKNOWN LIGAND(Non-functional Binders)
UNL.39: 8 residues within 4Å:- Chain B: W.90, L.148
- Ligands: CLA.22, CLA.23, CLA.24, CLA.33, CLA.34, BCR.37
Ligand excluded by PLIPUNL.43: 5 residues within 4Å:- Chain B: P.182, E.183, W.184, G.185
- Ligands: CLA.19
Ligand excluded by PLIPUNL.44: 17 residues within 4Å:- Chain 5: L.8, T.11, A.12, V.15, L.16
- Chain 8: M.1, I.4, T.5, F.8, I.9
- Chain B: Y.39
- Chain L: L.6
- Ligands: CLA.25, CLA.32, BCR.35, LMG.38, BCR.184
Ligand excluded by PLIPUNL.45: 8 residues within 4Å:- Chain B: L.147, F.150, I.206, I.209, I.210, L.213, L.217
- Ligands: UNL.46
Ligand excluded by PLIPUNL.46: 7 residues within 4Å:- Chain B: I.210, L.213, F.214, L.217, V.218
- Ligands: UNL.45, UNL.84
Ligand excluded by PLIPUNL.67: 5 residues within 4Å:- Chain C: L.182, D.183, P.184, R.185, W.217
Ligand excluded by PLIPUNL.68: 3 residues within 4Å:- Chain C: L.182, I.216, L.220
Ligand excluded by PLIPUNL.69: 13 residues within 4Å:- Chain C: V.39, W.75, F.87, P.88, V.91, V.92, V.95, H.96, S.99, L.103
- Ligands: CLA.49, CLA.59, BCR.60
Ligand excluded by PLIPUNL.79: 8 residues within 4Å:- Chain E: F.35, L.40, V.44
- Chain F: F.21
- Chain N: D.1, V.4, V.7, L.8
Ligand excluded by PLIPUNL.84: 10 residues within 4Å:- Chain B: V.207, I.210, F.214
- Chain G: L.29, F.33, L.36
- Ligands: CLA.19, CLA.27, UNL.46, BCR.82
Ligand excluded by PLIPUNL.85: 8 residues within 4Å:- Chain A: I.86, L.92
- Chain H: M.1, L.4
- Ligands: CLA.7, BCR.8, DGD.17, CLA.119
Ligand excluded by PLIPUNL.86: 6 residues within 4Å:- Chain I: G.22, F.25, Y.26, Y.29
- Ligands: DGD.63, LMG.65
Ligand excluded by PLIPUNL.88: 13 residues within 4Å:- Chain 5: L.16, V.20, I.23, V.27
- Chain K: V.10
- Chain L: V.17, V.20, F.21, I.24, L.25, Q.28
- Ligands: CLA.32, UNL.183
Ligand excluded by PLIPUNL.89: 6 residues within 4Å:- Chain L: I.23, Y.26, V.27
- Ligands: SQD.114, CLA.127, UNL.181
Ligand excluded by PLIPUNL.91: 17 residues within 4Å:- Chain A: L.62
- Chain O: M.1, T.3, I.4, V.7, F.8, A.11
- Chain V: S.35, L.38, Y.39, A.42, T.43
- Ligands: BCR.90, UNL.92, BCR.131, UNL.136, LMG.182
Ligand excluded by PLIPUNL.92: 17 residues within 4Å:- Chain 5: L.6
- Chain L: L.8, T.11, A.12, V.15
- Chain O: M.1, I.4, T.5, F.8, I.9
- Chain V: Y.39
- Ligands: BCR.90, UNL.91, CLA.120, CLA.127, BCR.130, LMG.182
Ligand excluded by PLIPUNL.94: 11 residues within 4Å:- Chain D: L.81, W.82, G.88
- Chain R: I.11, S.15, G.16, V.19, L.20
- Ligands: CLA.26, LMG.40, CLA.72
Ligand excluded by PLIPUNL.112: 4 residues within 4Å:- Chain U: R.6, F.7, W.10
- Ligands: BCR.102
Ligand excluded by PLIPUNL.133: 7 residues within 4Å:- Chain V: F.89, W.90, L.148
- Ligands: CLA.117, CLA.118, CLA.119, BCR.132
Ligand excluded by PLIPUNL.135: 11 residues within 4Å:- Chain 0: M.34
- Chain V: A.227, L.228, R.229, L.473
- Chain X: K.12, R.123
- Ligands: CLA.121, CLA.122, LMG.170, UNL.171
Ligand excluded by PLIPUNL.136: 16 residues within 4Å:- Chain A: V.39, I.43, A.44, L.62
- Chain O: V.7, F.10, A.11, I.14
- Chain V: L.38, L.41, A.42, S.75
- Ligands: DGD.17, BCR.90, UNL.91, BCR.131
Ligand excluded by PLIPUNL.137: 6 residues within 4Å:- Chain V: I.210, L.213, F.214, L.217, V.218
- Ligands: LMG.134
Ligand excluded by PLIPUNL.157: 13 residues within 4Å:- Chain W: V.39, W.75, F.87, P.88, V.91, V.92, V.95, H.96, S.99, L.103
- Ligands: CLA.140, CLA.150, BCR.151
Ligand excluded by PLIPUNL.160: 5 residues within 4Å:- Chain 3: F.28, F.36
- Chain W: W.13
- Ligands: SQD.108, BCR.178
Ligand excluded by PLIPUNL.171: 16 residues within 4Å:- Chain V: L.473
- Chain X: K.12, W.21, S.22, I.24, L.25, L.116, F.119, E.120, R.123
- Ligands: CLA.121, UNL.135, CLA.163, LMG.170
- Chain b: L.20, F.24
Ligand excluded by PLIPUNL.177: 8 residues within 4Å:- Chain 2: I.18, V.21, G.22, F.25, Y.26, Y.29
- Ligands: DGD.154, LMG.156
Ligand excluded by PLIPUNL.181: 19 residues within 4Å:- Chain 4: R.7, Q.8, P.9, V.10
- Chain 5: V.17, V.20, F.21, I.24, L.25, Q.28, Q.32
- Chain L: L.16, V.20, I.23, V.27, E.30, S.31
- Ligands: UNL.89, CLA.127
Ligand excluded by PLIPUNL.183: 6 residues within 4Å:- Chain 5: I.23, Y.26, V.27
- Ligands: CLA.32, SQD.42, UNL.88
Ligand excluded by PLIPUNL.185: 14 residues within 4Å:- Chain 8: M.1, T.3, I.4, V.7, F.8
- Chain B: S.35, L.38, Y.39, A.42, T.43
- Chain U: L.62
- Ligands: BCR.36, BCR.184, UNL.186
Ligand excluded by PLIPUNL.186: 11 residues within 4Å:- Chain 8: V.7, F.10, A.11, I.14
- Chain B: L.38, I.100
- Chain U: V.39, I.43, A.44
- Ligands: BCR.36, UNL.185
Ligand excluded by PLIPUNL.188: 12 residues within 4Å:- Chain X: L.81, W.82, Q.87, G.88
- Ligands: CLA.163
- Chain b: G.8, I.11, G.12, S.15, G.16, V.19, L.20
Ligand excluded by PLIP- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.70: 11 residues within 4Å:- Chain A: H.205, V.209, E.234, Y.236, H.262
- Chain D: H.203, V.207, Y.233, K.253, H.257
- Ligands: FE2.2
6 PLIP interactions:2 interactions with chain A, 4 interactions with chain D- Hydrogen bonds: A:E.234, A:H.262, D:H.203, D:Y.233, D:K.253, D:H.257
BCT.105: 12 residues within 4Å:- Chain U: H.205, V.209, E.234, Y.236, S.258, H.262
- Chain X: H.203, V.207, Y.233, K.253, H.257
- Ligands: FE2.97
5 PLIP interactions:4 interactions with chain U, 1 interactions with chain X- Hydrogen bonds: U:H.205, U:Y.236, U:Y.236, U:H.262, X:H.257
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.81: 24 residues within 4Å:- Chain E: R.6, F.8, I.11, R.16, Y.17, I.20, H.21, T.24, I.25, L.28
- Chain F: I.4, F.5, R.8, W.9, V.12, H.13, A.16, V.17, I.20
- Chain N: V.11, A.14, A.15, A.18, I.22
24 PLIP interactions:11 interactions with chain F, 9 interactions with chain E, 4 interactions with chain N,- Hydrophobic interactions: F:I.4, F:W.9, F:V.12, F:A.16, F:V.17, F:I.20, E:I.11, E:I.20, E:T.24, E:I.25, N:A.14, N:A.18, N:I.22, N:I.22
- Salt bridges: F:R.8, E:R.6, E:R.16
- pi-Stacking: F:W.9, F:W.9, F:H.13, E:Y.17
- Metal complexes: F:H.13, E:H.21
- Water bridges: E:R.6
HEM.173: 24 residues within 4Å:- Chain 7: V.11, A.14, A.15, A.18, I.22
- Chain Y: R.6, F.8, I.11, R.16, Y.17, I.20, H.21, T.24, I.25, L.28
- Chain Z: I.4, F.5, R.8, W.9, V.12, H.13, A.16, V.17, I.20
21 PLIP interactions:10 interactions with chain Z, 9 interactions with chain Y, 2 interactions with chain 7,- Hydrophobic interactions: Z:I.4, Z:W.9, Z:A.16, Z:V.17, Y:I.11, Y:T.24, Y:I.25, 7:I.22, 7:I.22
- Water bridges: Z:I.4, Z:T.6, Z:R.8, Y:R.6
- Salt bridges: Z:R.8, Y:R.6, Y:R.16
- pi-Cation interactions: Z:H.13
- Metal complexes: Z:H.13, Y:H.21
- pi-Stacking: Y:Y.17, Y:H.21
- 2 x HEC: HEME C(Covalent)
HEC.93: 29 residues within 4Å:- Chain C: A.371, T.375
- Chain Q: F.33, A.36, C.37, S.39, C.40, H.41, T.46, T.48, N.49, L.52, D.53, L.54, T.58, L.59, A.62, L.72, Y.75, M.76, T.81, Y.82, I.88, H.92, P.93, M.104, L.107, I.115, I.119
20 PLIP interactions:20 interactions with chain Q,- Hydrophobic interactions: Q:A.36, Q:T.46, Q:N.49, Q:L.52, Q:L.54, Q:L.72, Q:Y.75, Q:Y.75, Q:I.88, Q:P.93, Q:I.115, Q:I.119
- Hydrogen bonds: Q:N.49, Q:D.53, Q:D.53, Q:Y.82
- Water bridges: Q:Y.75
- pi-Stacking: Q:Y.75
- Metal complexes: Q:H.41, Q:H.92
HEC.187: 31 residues within 4Å:- Chain W: A.371, T.375
- Chain a: F.33, A.36, C.37, S.39, C.40, H.41, T.46, T.48, N.49, L.52, D.53, L.54, T.58, L.59, A.62, R.66, L.72, Y.75, M.76, T.81, Y.82, I.88, H.92, P.93, F.101, M.104, L.107, I.115, I.119
15 PLIP interactions:15 interactions with chain a,- Hydrophobic interactions: a:A.36, a:T.46, a:L.54, a:L.72, a:Y.75, a:I.88, a:I.115, a:I.119
- Hydrogen bonds: a:D.53, a:D.53
- Water bridges: a:N.49, a:Y.82
- pi-Stacking: a:Y.75
- Metal complexes: a:H.41, a:H.92
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kern, J. et al., Structures of the intermediates of Kok's photosynthetic water oxidation clock. Nature (2018)
- Release Date
- 2018-11-21
- Peptides
- Photosystem II protein D1 1: AU
Photosystem II CP47 reaction center protein: BV
Photosystem II CP43 reaction center protein: CW
Photosystem II D2 protein: DX
Cytochrome b559 subunit alpha: EY
Cytochrome b559 subunit beta: FZ
Photosystem II reaction center protein H: G0
Photosystem II reaction center protein I: H1
Photosystem II reaction center protein J: I2
Photosystem II reaction center protein K: J3
Photosystem II reaction center protein L: K4
Photosystem II reaction center protein M: L5
Photosystem II manganese-stabilizing polypeptide: M6
Photosystem II protein Y: N7
Photosystem II reaction center protein T: O8
Photosystem II 12 kDa extrinsic protein: P9
Cytochrome c-550: Qa
Photosystem II reaction center X protein: Rb
Photosystem II reaction center protein Ycf12: Sc
Photosystem II reaction center protein Z: Td - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AU
aB
BV
bC
CW
cD
DX
dE
EY
eF
FZ
fG
H0
hH
I1
iI
J2
jJ
K3
kK
L4
lL
M5
mM
O6
oN
R7
rO
T8
tP
U9
uQ
Va
vR
Xb
xS
Yc
yT
Zd
z - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 6dhp.1
RT XFEL structure of the three-flash state of Photosystem II (3F, S0-rich) at 2.04 Angstrom resolution
Photosystem II protein D1 1
Toggle Identical (AU)Photosystem II CP47 reaction center protein
Toggle Identical (BV)Photosystem II CP43 reaction center protein
Photosystem II D2 protein
Toggle Identical (DX)Cytochrome b559 subunit alpha
Cytochrome b559 subunit beta
Toggle Identical (FZ)Photosystem II reaction center protein H
Photosystem II reaction center protein I
Toggle Identical (H1)Photosystem II reaction center protein J
Toggle Identical (I2)Photosystem II reaction center protein K
Toggle Identical (J3)Photosystem II reaction center protein L
Photosystem II reaction center protein M
Photosystem II manganese-stabilizing polypeptide
Toggle Identical (M6)Photosystem II protein Y
Photosystem II reaction center protein T
Toggle Identical (O8)Photosystem II 12 kDa extrinsic protein
Toggle Identical (P9)Cytochrome c-550
Toggle Identical (Qa)Photosystem II reaction center X protein
Toggle Identical (Rb)Photosystem II reaction center protein Ycf12
Photosystem II reaction center protein Z
Toggle Identical (Td)Related Entries With Identical Sequence
1izl.1 | 1mz4.1 | 1s5l.1 | 1s5l.2 | 2axt.1 | 3a0b.1 | 3a0h.1 | 3kzi.1 | 3wu2.1 | 4fby.1 | 4il6.1 | 4ixq.1 | 4ixr.1 | 4pbu.1 | 4pj0.1 | 4rvy.1 | 4tnh.1 | 4tni.1 | 4tnj.1 | 4tnk.1 | 4ub6.1 | 4ub6.2 | 4ub8.1 | 4ub8.2 | 4v62.1 | 4v62.2 | 4v82.1 | 5b5e.1 | 5b66.1 | 5e79.1 more...less...5e7c.1 | 5gth.1 | 5gth.2 | 5gti.1 | 5gti.2 | 5h2f.1 | 5h2f.2 | 5kaf.1 | 5kai.1 | 5mx2.1 | 5mx2.2 | 5tis.1 | 5v2c.1 | 5ws5.1 | 5ws5.2 | 5ws6.1 | 5ws6.2 | 5zzn.1 | 5zzn.2 | 6dhe.1 | 6dhf.1 | 6dhg.1 | 6dhh.1 | 6dho.1 | 6jlj.1 | 6jlk.1 | 6jll.1 | 6jlm.1 | 6jln.1 | 6jlo.1 | 6jlp.1 | 6w1o.1 | 6w1p.1 | 6w1q.1 | 6w1r.1 | 6w1t.1 | 6w1u.1 | 6w1v.1 | 7cji.1 | 7cjj.1 | 7cou.1 | 7czl.1 | 7d1t.1 | 7d1u.1 | 7dxa.1 | 7dxh.1 | 7eda.1 | 7nho.1 | 7nhp.1 | 7nhq.1 | 7rf1.1 | 7rf2.1 | 7rf3.1 | 7rf4.1 | 7rf5.1 | 7rf6.1 | 7rf7.1 | 7rf8.1 | 7yq2.1 | 7yq7.1 | 8ez5.1 | 8f4c.1 | 8f4d.1 | 8f4e.1 | 8f4f.1 | 8f4g.1 | 8f4h.1 | 8f4i.1 | 8f4j.1 | 8f4k.1 | 8gn0.1 | 8gn1.1 | 8gn2.1 | 8ir5.1 | 8ir6.1 | 8ir7.1 | 8ir8.1 | 8ir9.1 | 8ira.1 | 8irb.1 | 8irc.1 | 8ird.1 | 8ire.1 | 8irf.1 | 8irg.1 | 8irh.1 | 8iri.1