SMTL ID : 7qo6.1

26S proteasome Rpt1-RK -Ubp6-UbVS complex in the s2 state

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
5 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Covalent)
6 x MG: MAGNESIUM ION(Non-covalent)
1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Hung, K.Y.S. et al., Allosteric control of Ubp6 and the proteasome via a bidirectional switch. Nat Commun (2022)
Release Date
2022-03-16
Peptides
BJ4_G0020160.mRNA.1.CDS.1: AO
HLJ1_G0039880.mRNA.1.CDS.1: BP
BJ4_G0021480.mRNA.1.CDS.1: CQ
HLJ1_G0048980.mRNA.1.CDS.1: DR
EM14S01-3B_G0035190.mRNA.1.CDS.1: ES
BJ4_G0043800.mRNA.1.CDS.1: FT
Probable proteasome subunit alpha type-7: GU
Proteasome subunit beta type-1: HV
Proteasome endopeptidase complex: IW
Proteasome endopeptidase complex: JX
Proteasome subunit beta: KY
Proteasome subunit beta type-5: LZ
HLJ1_G0013750.mRNA.1.CDS.1: M0
Proteasome subunit beta type-7: N1
26S proteasome regulatory subunit RPN10: 2
26S proteasome regulatory subunit RPN11: 3
EM14S01-3B_G0050020.mRNA.1.CDS.1: 4
HLJ1_G0030700.mRNA.1.CDS.1: 5
26S proteasome complex subunit SEM1: 6
26S proteasome regulatory subunit RPN1: 7
26S proteasome regulatory subunit RPN2: 8
26S proteasome regulatory subunit RPN3: 9
26S proteasome regulatory subunit RPN5: a
26S proteasome regulatory subunit RPN6: b
26S proteasome regulatory subunit RPN7: c
26S proteasome regulatory subunit RPN8: d
26S proteasome regulatory subunit RPN9: e
26S proteasome regulatory subunit 7 homolog: f
26S proteasome regulatory subunit 4 homolog: g
26S proteasome regulatory subunit 6B homolog: h
26S proteasome subunit RPT4: i
26S proteasome regulatory subunit 6A: j
26S proteasome regulatory subunit 8 homolog: k
Ubiquitin carboxyl-terminal hydrolase: l
Polyubiquitin-B: m
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
a
O
A
B
b
P
B
C
c
Q
C
D
d
R
D
E
e
S
E
F
f
T
F
G
g
U
G
H
h
V
1
I
i
W
2
J
j
X
3
K
k
Y
4
L
l
Z
5
M
m
0
6
N
n
1
7
2
W
3
V
4
T
5
X
6
Y
7
Z
8
N
9
S
a
P
b
Q
c
R
d
U
e
O
f
H
g
I
h
K
i
L
j
M
k
J
l
8
m
9

BJ4_G0020160.mRNA.1.CDS.1

Toggle Identical (AO)

HLJ1_G0039880.mRNA.1.CDS.1

Toggle Identical (BP)

BJ4_G0021480.mRNA.1.CDS.1

Toggle Identical (CQ)

HLJ1_G0048980.mRNA.1.CDS.1

Toggle Identical (DR)

EM14S01-3B_G0035190.mRNA.1.CDS.1

Toggle Identical (ES)

BJ4_G0043800.mRNA.1.CDS.1

Toggle Identical (FT)

Probable proteasome subunit alpha type-7

Toggle Identical (GU)

Proteasome subunit beta type-1

Toggle Identical (HV)

Proteasome endopeptidase complex

Toggle Identical (IW)

Proteasome endopeptidase complex

Toggle Identical (JX)

Proteasome subunit beta

Toggle Identical (KY)

Proteasome subunit beta type-5

Toggle Identical (LZ)

HLJ1_G0013750.mRNA.1.CDS.1

Toggle Identical (M0)

Proteasome subunit beta type-7

Toggle Identical (N1)

26S proteasome regulatory subunit RPN10

26S proteasome regulatory subunit RPN11

EM14S01-3B_G0050020.mRNA.1.CDS.1

HLJ1_G0030700.mRNA.1.CDS.1

26S proteasome complex subunit SEM1

26S proteasome regulatory subunit RPN1

26S proteasome regulatory subunit RPN2

26S proteasome regulatory subunit RPN3

26S proteasome regulatory subunit RPN5

26S proteasome regulatory subunit RPN6

26S proteasome regulatory subunit RPN7

26S proteasome regulatory subunit RPN8

26S proteasome regulatory subunit RPN9

26S proteasome regulatory subunit 7 homolog

26S proteasome regulatory subunit 4 homolog

26S proteasome regulatory subunit 6B homolog

26S proteasome subunit RPT4

26S proteasome regulatory subunit 6A

26S proteasome regulatory subunit 8 homolog

Ubiquitin carboxyl-terminal hydrolase

Polyubiquitin-B

Related Entries With Identical Sequence

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