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SMTL ID : 4y32.1

Crystal structure of C-terminal modified Tau peptide-hybrid 109B with 14-3-3sigma

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x ARG- THR- PRO- SEP- LEU- PRO- THR: ARG-THR-PRO-SEP-LEU-PRO-CNC(C(C)O)C(=O)N1CCCC1CCOC(Non-covalent)

ARG-THR-PRO-SEP-LEU-PRO-THR.1:

14 residues within 4Å:

Chain A: K.54, R.61, R.134, Y.135, G.176, L.179, N.180, V.183, Y.186, E.187, L.227, N.231, W.235
Ligands: 49F.2

18 PLIP interactions:

18 interactions with chain A

Hydrophobic interactions: A:W.235
Hydrogen bonds: A:N.180, A:E.187, A:E.187, A:N.231, A:W.235
Water bridges: A:R.61, A:R.61, A:R.134, A:R.134, A:Y.156, A:N.180, A:N.180, A:N.180, A:E.187
Salt bridges: A:K.54, A:R.61, A:R.134

ARG-THR-PRO-SEP-LEU-PRO-THR.3:

14 residues within 4Å:

Chain B: K.54, R.61, K.127, R.134, Y.135, G.176, L.179, N.180, V.183, Y.186, E.187, L.227, N.231, W.235

18 PLIP interactions:

18 interactions with chain B

Hydrophobic interactions: B:L.179, B:N.231, B:W.235
Hydrogen bonds: B:K.54, B:N.180, B:N.180, B:E.187, B:E.187, B:E.187, B:N.231
Water bridges: B:K.54, B:R.61, B:R.61, B:R.134, B:Y.135
Salt bridges: B:K.54, B:R.61, B:R.134

1 x 49F: (2S)-2-(2-methoxyethyl)pyrrolidine(Non-covalent)

49F.2:

8 residues within 4Å:

Chain A: N.47, S.50, V.51, F.124, K.127, I.173
Ligands: ARG-THR-PRO-SEP-LEU-PRO-THR.1, ARG-THR-PRO-SEP-LEU-PRO-THR.1

2 PLIP interactions:

2 interactions with chain A

Hydrophobic interactions: A:V.51, A:F.124

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Milroy, L.G. et al., Stabilizer-Guided Inhibition of Protein-Protein Interactions. Angew.Chem.Int.Ed.Engl. (2015)

Release Date

2015-12-23

Peptides

14-3-3 protein sigma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

14-3-3 protein sigma

Toggle Identical (AB)

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