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SMTL ID : 6fcp.1

Crystal structure of 14-3-3 sigma in complex with Shroom3 P1244L

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

hetero-2-2-mer

Ligands

4 x MG: MAGNESIUM ION(Non-covalent)

MG.1:	1 residues within 4Å: Chain A: E.7 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.7, H₂O.2, H₂O.9, H₂O.12
MG.2:	4 residues within 4Å: Chain A: E.40, E.115, A.116, G.117 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.40, A:E.40, A:E.115, H₂O.8, H₂O.9
MG.5:	1 residues within 4Å: Chain C: E.7 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:E.7, H₂O.17, H₂O.25, H₂O.27
MG.6:	4 residues within 4Å: Chain C: E.40, E.115, A.116, G.117 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.40, C:E.40, C:E.115, H₂O.24, H₂O.25

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.3:	6 residues within 4Å: Chain A: M.6, K.14, F.30 Chain C: E.88, Y.89, K.92 Ligand excluded by PLIP
CL.4:	3 residues within 4Å: Chain A: D.161, K.164, K.165 Ligand excluded by PLIP
CL.7:	6 residues within 4Å: Chain A: E.88, Y.89, K.92 Chain C: M.6, K.14, F.30 Ligand excluded by PLIP
CL.8:	3 residues within 4Å: Chain C: D.161, K.164, K.165 Ligand excluded by PLIP

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Prokop, J.W. et al., Characterization of Coding/Noncoding Variants forSHROOM3in Patients with CKD. J. Am. Soc. Nephrol. (2018)

Release Date

2018-03-14

Peptides

14-3-3 protein sigma: AC
Protein Shroom3: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
P

D
P

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

14-3-3 protein sigma

Toggle Identical (AC)

Protein Shroom3

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