- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PHE- PRO- ALA- TPO- VAL: Estrogen receptor(Non-covalent)
PHE-PRO-ALA-TPO-VAL.1: 15 residues within 4Å:- Chain A: K.54, R.61, R.65, K.127, R.134, Y.135, G.176, L.179, N.180, V.183, E.187, L.227, N.231, W.235
- Ligands: 01.2
20 PLIP interactions:20 interactions with chain A- Hydrophobic interactions: A:L.179, A:V.183, A:E.187, A:L.227, A:W.235
- Hydrogen bonds: A:N.180, A:N.180, A:N.180, A:N.231, A:N.231
- Water bridges: A:R.61, A:R.61, A:R.61, A:R.61, A:R.65, A:Y.135, A:Y.135
- Salt bridges: A:R.61, A:K.127, A:R.134
PHE-PRO-ALA-TPO-VAL.9: 15 residues within 4Å:- Chain B: K.54, R.61, R.65, K.127, R.134, Y.135, G.176, L.179, N.180, V.183, E.187, L.227, N.231, W.235
- Ligands: 01.10
18 PLIP interactions:18 interactions with chain B- Hydrophobic interactions: B:L.179, B:V.183, B:E.187, B:L.227, B:W.235
- Hydrogen bonds: B:Y.135, B:N.180, B:N.180, B:N.231, B:N.231
- Water bridges: B:R.61, B:R.61, B:R.61, B:R.61, B:R.65
- Salt bridges: B:R.61, B:K.127, B:R.134
- 2 x 01: 2-chloranyl-~{N}-[4-[3-[(phenylmethyl)amino]imidazo[1,2-a]pyridin-2-yl]phenyl]ethanamide
01.2: 10 residues within 4Å:- Chain A: C.43, N.47, E.120, F.124, K.127, P.172, I.173, G.176, I.224
- Ligands: PHE-PRO-ALA-TPO-VAL.1
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:F.124, A:K.127, A:P.172, A:I.224
- Hydrogen bonds: A:N.47
01.10: 10 residues within 4Å:- Chain B: C.43, N.47, E.120, F.124, K.127, P.172, I.173, G.176, I.224
- Ligands: PHE-PRO-ALA-TPO-VAL.9
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:F.124, B:K.127, B:P.172, B:I.224
- Hydrogen bonds: B:N.47
- 10 x CA: CALCIUM ION(Non-covalent)
CA.3: 1 residues within 4Å:- Chain A: E.80
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:E.80
CA.4: 1 residues within 4Å:- Chain A: E.94
3 PLIP interactions:1 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.94, H2O.1, H2O.1
CA.5: 2 residues within 4Å:- Chain A: E.40, E.115
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.40, A:E.40, A:E.115, H2O.7, H2O.9
CA.6: 3 residues within 4Å:- Chain A: K.82, E.85
- Chain B: Q.13
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:K.82, A:E.85, A:E.85, H2O.3, H2O.9
CA.7: 1 residues within 4Å:- Chain A: E.7
3 PLIP interactions:1 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.7, H2O.2, H2O.8
CA.11: 1 residues within 4Å:- Chain B: E.80
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:E.80
CA.12: 1 residues within 4Å:- Chain B: E.94
3 PLIP interactions:1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.94, H2O.13, H2O.13
CA.13: 2 residues within 4Å:- Chain B: E.40, E.115
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.40, B:E.40, B:E.115, H2O.19, H2O.21
CA.14: 3 residues within 4Å:- Chain A: Q.13
- Chain B: K.82, E.85
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:K.82, B:E.85, B:E.85, H2O.15, H2O.21
CA.15: 1 residues within 4Å:- Chain B: E.7
3 PLIP interactions:1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.7, H2O.14, H2O.20
- 2 x CL: CHLORIDE ION(Non-functional Binders)
CL.8: 4 residues within 4Å:- Chain A: E.88, Y.89, K.92
- Chain B: K.14
Ligand excluded by PLIPCL.16: 4 residues within 4Å:- Chain A: K.14
- Chain B: E.88, Y.89, K.92
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Konstantinidou, M. et al., Scaffold-hopping for molecular glues targeting the 14-3-3/ER alpha complex. Nat Commun (2025)
- Release Date
- 2025-07-30
- Peptides
- 14-3-3 protein sigma: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
SMTL ID : 9i6y.1
14-3-3sigma binding to the ERa peptide and compound 1
14-3-3 protein sigma
Toggle Identical (AB)Related Entries With Identical Sequence
3iqj.1 | 3iqu.1 | 3iqv.1 | 3mhr.1 | 4fl5.1 | 4iea.1 | 4jc3.1 | 4jdd.1 | 4y32.1 | 4y3b.1 | 4y5i.1 | 5hf3.1 | 5mhc.1 | 5moc.1 | 5mxo.1 | 5my9.1 | 5myc.1 | 5n5r.1 | 5n5t.1 | 5n5w.1 | 5n75.1 | 5oeh.1 | 6fau.1 | 6fav.1 | 6faw.1 | 6fbb.1 | 6fbw.1 | 6fby.1 | 6fcp.1 | 6fi4.1 more...less...6fi5.1 | 6g6x.1 | 6g8i.1 | 6g8j.1 | 6g8k.1 | 6g8l.1 | 6g8p.1 | 6g8q.1 | 6ghp.1 | 6nv2.1 | 6qdr.1 | 6qds.1 | 6qdt.1 | 6qdu.1 | 6qiu.1 | 6r5l.1 | 6rhc.1 | 6rp6.1 | 6sin.1 | 6sio.1 | 6sip.1 | 6siq.1 | 6slv.1 | 6tch.1 | 6tjm.1 | 6tl3.1 | 6w0l.1 | 6xwd.1 | 6y58.1 | 6ye9.1 | 6yia.1 | 6yib.1 | 6yic.1 | 6ylu.1 | 6yow.1 | 6yoy.1 | 6yp2.1 | 6yp3.1 | 6yp8.1 | 6ypl.1 | 6ypy.1 | 6yq2.1 | 6yr5.1 | 6yr5.2 | 6yr6.1 | 6yr6.2 | 6yr7.1 | 6zcj.1 | 7aew.1 | 7b13.1 | 7b15.1 | 7nv4.1 | 7nvi.1 | 7nws.1 | 7nxs.1 | 7nxt.1 | 7nxw.1 | 7nxy.1 | 7ny4.1 | 7nye.1 | 7nyf.1 | 7nyg.1 | 7nz6.1 | 7nzg.1 | 7nzk.1 | 7nzv.1 | 7o07.1 | 7o34.1 | 7o3a.1 | 7o3f.1 | 7o3p.1 | 7o3q.1 | 7o3r.1 | 7o3s.1 | 7o57.1 | 7o59.1 | 7o5a.1 | 7o5c.1 | 7o5d.1 | 7o5f.1 | 7o5g.1 | 7o5o.1 | 7o5p.1 | 7o5s.1 | 7o5u.1 | 7o5x.1 | 7o6f.1 | 7o6g.1 | 7o6i.1 | 7o6j.1 | 7o6k.1 | 7o6m.1 | 7o6o.1 | 7pwt.1 | 7pwz.1 | 7zmu.1 | 7zmw.1 | 8a62.1 | 8a65.1 | 8a68.1 | 8a6f.1 | 8a6h.1 | 8adm.1 | 8afn.1 | 8ai0.1 | 8alr.1 | 8alt.1 | 8alv.1 | 8alw.1 | 8am7.1 | 8anf.1 | 8aoy.1 | 8aps.1 | 8aq1.1 | 8aqc.1 | 8aqe.1 | 8aqz.1 | 8ar4.1 | 8ar5.1 | 8arg.1 | 8aro.1 | 8arq.1 | 8arr.1 | 8arw.1 | 8arx.1 | 8ary.1 | 8arz.1 | 8as1.1 | 8at9.1 | 8atp.1 | 8atr.1 | 8ats.1 | 8au2.1 | 8aus.1 | 8auy.1 | 8av0.1 | 8av3.1 | 8av4.1 | 8av8.1 | 8awg.1 | 8axe.1 | 8axu.1 | 8aze.1 | 8b39.1 | 8bi7.1 | 8btq.1 | 8bwe.1 | 8bwh.1 | 8bwj.1 | 8bwx.1 | 8bwz.1 | 8bx0.1 | 8bx3.1 | 8bx4.1 | 8bxi.1 | 8bxm.1 | 8bxn.1 | 8bxo.1 | 8bxq.1 | 8bxs.1 | 8by9.1 | 8byb.1 | 8byc.1 | 8byd.1 | 8bye.1 | 8byf.1 | 8byg.1 | 8byo.1 | 8byy.1 | 8byz.1 | 8bz0.1 | 8bz9.1 | 8bza.1 | 8bzd.1 | 8bze.1 | 8bzf.1 | 8bzg.1 | 8bzh.1 | 8bzt.1 | 8c0k.1 | 8c0l.1 | 8c1y.1 | 8c28.1 | 8c2d.1 | 8c2e.1 | 8c2f.1 | 8c2g.1 | 8c2y.1 | 8c30.1 | 8c3c.1 | 8c3z.1 | 8c40.1 | 8c42.1 | 8c43.1 | 8c4f.1 | 8c4g.1 | 8q55.1 | 8q5c.1 | 8qs2.1 | 8qs4.1 | 8qs5.1 | 8qs6.1 | 8qs7.1 | 8qs8.1 | 8qs9.1 | 8qsa.1 | 8qsb.1 | 8qsc.1 | 8qsd.1 | 8qse.1 | 8qsf.1 | 8qsg.1 | 8qsh.1 | 8s42.1 | 8vsl.1 | 8vsm.1 | 8vsn.1 | 8vso.1 | 9ew1.1 | 9ew3.1 | 9ew4.1 | 9ew5.1 | 9ew6.1 | 9ew7.1 | 9f35.1 | 9fvg.1 | 9fvh.1 | 9fvi.1 | 9fvn.1 | 9i6s.1 | 9i6t.1 | 9i6u.1 | 9i6v.1 | 9i6w.1 | 9i6x.1 | 9i6z.1 | 9i70.1 | 9i71.1 | 9i72.1 | 9i73.1 | 9i74.1 | 9i75.1