SMTL ID : 2a2x.1 (1 other biounit)

Orally Active Thrombin Inhibitors in Complex with Thrombin Inh12

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NA9: N-(CARBOXYMETHYL)-3-CYCLOHEXYL-D-ALANYL-N-({6-[AMINO(IMINO)METHYL]PYRIDIN-3-YL}METHYL)-N~2~-METHYL-L-ALANINAMIDE(Non-covalent)

NA9.1: 15 residues within 4Å: Chain B: H.43, Y.47, W.50, L.96, D.199, A.200, S.205, V.225, S.226, W.227, G.228, E.229, G.230, C.231, G.238 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:L.96, B:W.227 Hydrogen bonds: B:A.200, B:S.226, B:W.227, B:G.228, B:G.228, B:G.228, B:G.230, B:G.230 Water bridges: B:S.226, B:F.239

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lange, U.E.W. et al., Orally active thrombin inhibitors. Part 2: optimization of the P2-moiety. BIOORG.MED.CHEM.LETT. (2006)

Release Date

2006-11-14

Peptides

Thrombin light chain: A
Thrombin heavy chain: B
synthetic peptide: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
P

Thrombin light chain

Thrombin heavy chain

synthetic peptide

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