SMTL ID : 3p6z.1 (1 other biounit)

Structural basis of thrombin mediated factor V activation: essential role of the hirudin-like sequence Glu666-Glu672 for processing at the heavy chain-B domain junction

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.70 Å
Oligo State
hetero-1-1-1-mer
Ligands
3 x NA: SODIUM ION(Non-functional Binders)
1 x 0G6: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide(Covalent)
1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x CL: CHLORIDE ION(Non-functional Binders)
1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Corral-Rodriguez, M.A. et al., Structural basis of thrombin-mediated factor V activation: the Glu666-Glu672 sequence is critical for processing at the heavy chain-B domain junction. Blood (2011)
Release Date
2011-06-15
Peptides
Thrombin light chain: A
Thrombin heavy chain: B
Coagulation factor V: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C

Thrombin light chain

Thrombin heavy chain

Coagulation factor V

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1a2c.1 | 1a3b.1 | 1a3e.1 | 1a46.1 | 1a4w.1 | 1a5g.1 | 1a61.1 | 1abi.1 | 1abj.1 | 1ad8.1 | 1ae8.1 | 1afe.1 | 1aht.1 | 1ai8.1 | 1aix.1 | 1awf.1 | 1awh.1 | 1awh.2 | 1ay6.1 | 1b5g.1 | 1b7x.1 | 1ba8.1 | 1bb0.1 | 1bcu.1 | 1bmm.1 | 1bmn.1 | 1bth.1 | 1bth.2 | 1c1u.1 | 1c1v.1  more...