SMTL ID : 2hgt.1

STRUCTURE OF THE HIRUGEN AND HIRULOG 1 COMPLEXES OF ALPHA-THROMBIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x DPN- PRO- ARG: Hirulog(Non-covalent)

DPN-PRO-ARG.1: 20 residues within 4Å: Chain B: H.43, Y.47, W.50, E.94, N.95, L.96, I.179, D.199, A.200, C.201, E.202, G.203, D.204, S.205, S.226, W.227, G.228, G.230, C.231, G.238 22 PLIP interactions: 22 interactions with chain B Hydrophobic interactions: B:Y.47, B:W.50, B:L.96, B:L.96, B:I.179, B:W.227 Hydrogen bonds: B:A.200, B:E.202, B:G.203, B:D.204, B:S.205, B:S.205, B:S.226, B:G.228, B:G.228, B:G.230 Water bridges: B:D.199, B:W.227, B:G.230, B:Y.240 Salt bridges: B:H.43, B:D.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skrzypczak-Jankun, E. et al., Structure of the hirugen and hirulog 1 complexes of alpha-thrombin. J.Mol.Biol. (1991)

Release Date

1994-01-31

Peptides

ALPHA-THROMBIN (SMALL SUBUNIT): A
ALPHA-THROMBIN (LARGE SUBUNIT): B
Hirulog: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
J

ALPHA-THROMBIN (SMALL SUBUNIT)

ALPHA-THROMBIN (LARGE SUBUNIT)

Hirulog

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