SMTL ID : 1tmb.1

MOLECULAR BASIS FOR THE INHIBITION OF HUMAN ALPHA-THROMBIN BY THE MACROCYCLIC PEPTIDE CYCLOTHEONAMIDE A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x 0MG- DPN- VLT- 0FL- PRO: cyclotheonamide A(Non-covalent)

0MG-DPN-VLT-0FL-PRO.1: 19 residues within 4Å: Chain B: L.26, L.27, H.43, Y.47, W.50, L.96, D.199, A.200, C.201, E.202, G.203, D.204, S.205, S.226, W.227, G.228, G.230, C.231, G.238 21 PLIP interactions: 21 interactions with chain B Hydrophobic interactions: B:L.26, B:Y.47, B:W.50, B:W.50, B:L.96, B:E.202 Hydrogen bonds: B:A.200, B:G.203, B:D.204, B:S.205, B:S.205, B:S.226, B:G.228, B:G.228, B:G.230 Water bridges: B:W.227, B:G.230, B:G.230, B:Y.240 Salt bridges: B:D.199 pi-Stacking: B:W.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maryanoff, B.E. et al., Molecular basis for the inhibition of human alpha-thrombin by the macrocyclic peptide cyclotheonamide A. Proc.Natl.Acad.Sci.USA (1993)

Release Date

1994-01-31

Peptides

ALPHA-THROMBIN (SMALL SUBUNIT): A
ALPHA-THROMBIN (LARGE SUBUNIT): B
HIRUGEN: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
I

ALPHA-THROMBIN (SMALL SUBUNIT)

ALPHA-THROMBIN (LARGE SUBUNIT)

HIRUGEN

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