SMTL ID : 1ny2.1

Human alpha thrombin inhibited by RPPGF and hirugen

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ARG- PRO- PRO- GLY: Inhibitor peptide RPPGF(Non-covalent)

ARG-PRO-PRO-GLY.1: 14 residues within 4Å: Chain B: H.43, W.50, L.96, D.199, A.200, C.201, E.202, S.205, V.225, S.226, W.227, G.228, G.230, G.238 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:W.50, B:V.225 Hydrogen bonds: B:H.43, B:A.200, B:S.205, B:G.228, B:G.228, B:G.230 Water bridges: B:D.232 Salt bridges: B:D.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hasan, A.A. et al., Mechanisms of Arg-Pro-Pro-Gly-Phe inhibition of thrombin. Am.J.Physiol.Heart Circ.Physiol. (2003)

Release Date

2003-03-04

Peptides

thrombin light chain: A
thrombin Heavy chain: B
Hirugen: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

C
3

thrombin light chain

thrombin Heavy chain

Hirugen

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