SMTL ID : 1ai8.1

HUMAN ALPHA-THROMBIN TERNARY COMPLEX WITH THE EXOSITE INHIBITOR HIRUGEN AND ACTIVE SITE INHIBITOR PHCH2OCO-D-DPA-PRO-BOROMPG

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x T42: MORPHOLINO-DIPHENYLALANINE-METHOXYPROPYLBORONIC ACID(Covalent)

T42.1: 20 residues within 4Å: Chain B: H.43, Y.47, W.50, E.94, N.95, L.96, I.179, D.199, A.200, C.201, E.202, G.203, D.204, S.205, S.226, W.227, G.228, E.229, G.230, G.238 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:Y.47, B:W.50, B:L.96, B:L.96, B:I.179, B:W.227, B:E.229 Hydrogen bonds: B:G.203, B:D.204, B:S.205, B:S.226, B:G.228 Water bridges: B:E.229 pi-Stacking: B:H.43

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bode, W. et al., The refined 1.9-A X-ray crystal structure of D-Phe-Pro-Arg chloromethylketone-inhibited human alpha-thrombin: structure analysis, overall structure, electrostatic properties, detailed active-site geometry, and structure-function relationships. Protein Sci. (1992)

Release Date

1997-10-15

Peptides

ALPHA-THROMBIN (SMALL SUBUNIT): A
ALPHA-THROMBIN (LARGE SUBUNIT): B
HIRUDIN IIIB: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
I

ALPHA-THROMBIN (SMALL SUBUNIT)

ALPHA-THROMBIN (LARGE SUBUNIT)

HIRUDIN IIIB

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