SMTL ID : 1lhc.1

HUMAN ALPHA-THROMBIN COMPLEXED WITH AC-(D)PHE-PRO-BOROARG-OH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x DP7: AC-(D)PHE-PRO-BOROARG-OH(Covalent)

DP7.1: 21 residues within 4Å: Chain B: H.43, Y.47, W.50, E.94, N.95, L.96, I.179, D.199, A.200, C.201, E.202, G.203, D.204, S.205, S.226, W.227, G.228, E.229, G.230, C.231, G.238 22 PLIP interactions: 22 interactions with chain B Hydrophobic interactions: B:Y.47, B:W.50, B:L.96, B:L.96, B:I.179, B:W.227 Hydrogen bonds: B:A.200, B:E.202, B:G.203, B:D.204, B:S.205, B:S.226, B:W.227, B:G.228, B:G.228, B:G.230 Water bridges: B:D.199, B:E.202, B:E.202, B:G.230, B:F.239 Salt bridges: B:D.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weber, P.C. et al., Kinetic and crystallographic studies of thrombin with Ac-(D)Phe-Pro-boroArg-OH and its lysine, amidine, homolysine, and ornithine analogs. Biochemistry (1995)

Release Date

1996-11-08

Peptides

ALPHA-THROMBIN: A
ALPHA-THROMBIN: B
HIRUDIN: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
I

ALPHA-THROMBIN

ALPHA-THROMBIN

HIRUDIN

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