SMTL ID : 4e06.1

Anophelin from the malaria vector inhibits thrombin through a novel reverse-binding mechanism

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain B: N.53 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.53

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain B: Y.190, R.233, K.236 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.236, B:K.236 Water bridges: B:Y.190, B:R.233

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Figueiredo, A.C. et al., Unique thrombin inhibition mechanism by anophelin, an anticoagulant from the malaria vector. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-12-05

Peptides

Thrombin: A
Thrombin: B
Salivary anti-thrombin peptide anophelin: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
I

Thrombin

Thrombin

Salivary anti-thrombin peptide anophelin

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