SMTL ID : 5nhu.1 (2 other biounits)

HUMAN ALPHA THROMBIN COMPLEXED WITH ANOPHELES GAMBIAE cE5 ANTICOAGULANT

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain B: L.46, N.53 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:L.46 Water bridges: B:N.53, B:N.53

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain B: R.233, K.236 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:R.233, B:K.236 Water bridges: B:D.234, B:G.235, B:G.238

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pirone, L. et al., Functional analyses yield detailed insight into the mechanism of thrombin inhibition by the antihemostatic salivary protein cE5 from Anopheles gambiae. J. Biol. Chem. (2017)

Release Date

2017-06-14

Peptides

Prothrombin: A
Prothrombin: B
AGAP008004-PA: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
I

Prothrombin

Prothrombin

AGAP008004-PA

Related Entries With Identical Sequence