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SMTL ID : 2pgb.1

Inhibitor-free human thrombin mutant C191A-C220A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.1:

1 residues within 4Å:

Chain B: N.53

1 PLIP interactions:

1 interactions with chain B

Hydrogen bonds: B:N.53

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2:	4 residues within 4Å: Chain B: D.122, R.123, F.244, K.247 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:R.123 Water bridges: B:D.122, B:R.123, B:R.123, B:R.123, B:R.123, B:K.247, B:Q.251 Salt bridges: B:R.123, B:K.247
SO4.3:	5 residues within 4Å: Chain B: H.87, R.89, R.98, L.246, W.249 6 PLIP interactions: 6 interactions with chain B Water bridges: B:R.98, B:R.245, B:L.246 Salt bridges: B:H.87, B:R.89, B:R.98

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Bush-Pelc, L.A. et al., Important role of the cys-191 cys-220 disulfide bond in thrombin function and allostery. J.Biol.Chem. (2007)

Release Date

2007-07-17

Peptides

Prothrombin: A
Prothrombin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Prothrombin

Prothrombin

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