SMTL ID : 1nzq.1

D-Phe-Pro-Arg-Type Thrombin Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.18 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x 162: (2-{2-[(5-CARBAMIMIDOYL-1-METHYL-1H-PYRROL-3-YLMETHYL)-CARBAMOYL]-PYRROL-1-YL} -1-CYCLOHEXYLMETHYL-2-OXO-ETHYLAMINO)-ACETIC ACID(Non-covalent)

162.1: 17 residues within 4Å: Chain B: H.43, Y.47, W.50, E.94, N.95, L.96, D.199, A.200, E.202, S.205, S.226, W.227, G.228, E.229, G.230, C.231, G.238 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:Y.47, B:W.50, B:W.227 Hydrogen bonds: B:D.199, B:D.199, B:E.202, B:S.226, B:G.228, B:G.230 Water bridges: B:F.239

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lange, U.E. et al., D-Phe-Pro-Arg type thrombin inhibitors: unexpected selectivity by modification of the P1 moiety. Bioorg.Med.Chem.Lett. (2003)

Release Date

2003-10-14

Peptides

Thrombin light chain: A
Thrombin heavy chain: B
Decapeptide Hirudin Analogue: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
D

Thrombin light chain

Thrombin heavy chain

Decapeptide Hirudin Analogue

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