SMTL ID : 3pmh.1

Mechanism of Sulfotyrosine-Mediated Glycoprotein Ib Interaction with Two Distinct alpha-Thrombin Sites

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.20 Å
Oligo State
hetero-1-1-1-mer
Ligands
1 x NAG- NAG- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
1 x 0G7: D-phenylalanyl-N-[(3S)-6-carbamimidamido-1-chloro-2-oxohexan-3-yl]-L-prolinamide(Non-covalent)
1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Zarpellon, A. et al., Binding of alpha-thrombin to surface-anchored platelet glycoprotein Ib(alpha) sulfotyrosines through a two-site mechanism involving exosite I. Proc.Natl.Acad.Sci.USA (2011)
Release Date
2011-06-01
Peptides
THROMBIN ALPHA-CHAIN: A
THROMBIN BETA-CHAIN: B
Platelet glycoprotein Ib alpha chain: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
G

THROMBIN ALPHA-CHAIN

THROMBIN BETA-CHAIN

Platelet glycoprotein Ib alpha chain

Related Entries With Identical Sequence

1a2c.1 | 1a3b.1 | 1a3e.1 | 1a46.1 | 1a4w.1 | 1a5g.1 | 1a61.1 | 1abi.1 | 1abj.1 | 1ad8.1 | 1ae8.1 | 1afe.1 | 1aht.1 | 1ai8.1 | 1aix.1 | 1awf.1 | 1awh.1 | 1awh.2 | 1ay6.1 | 1b5g.1 | 1b7x.1 | 1ba8.1 | 1bb0.1 | 1bcu.1 | 1bmm.1 | 1bmn.1 | 1bth.1 | 1bth.2 | 1c1u.1 | 1c1v.1  more...