SMTL ID : 5e8e.1

Crystal structure of thrombin bound to an exosite 1-specific IgA Fab

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.90 Å
Oligo State
hetero-oligomer
Ligands
5 x NAG: N-ACETYL-D-GLUCOSAMINE(Post Translational Modification)(Non-functional Binders)
3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
5 x PO4: PHOSPHATE ION(Non-functional Binders)
1 x BMA: BETA-D-MANNOSE(Non-functional Binders)
1 x MAN: ALPHA-D-MANNOSE(Non-functional Binders)
1 x GAL: BETA-D-GALACTOSE(Non-functional Binders)
1 x SIA: O-SIALIC ACID(Non-functional Binders)
1 x CIT: CITRIC ACID(Non-functional Binders)
1 x NA: SODIUM ION(Non-functional Binders)
1 x 0G6: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide(Covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Baglin, T.P. et al., Discovery and characterization of an antibody directed against exosite I of thrombin. J.Thromb.Haemost. (2016)
Release Date
2015-10-28
Peptides
IGA FAB LIGHT CHAIN: A
IGA FAB HEAVY CHAIN: B
THROMBIN HEAVY CHAIN: C
THROMBIN LIGHT CHAIN: D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
H
D
L

IGA FAB LIGHT CHAIN

IGA FAB HEAVY CHAIN

THROMBIN HEAVY CHAIN

THROMBIN LIGHT CHAIN

Related Entries With Identical Sequence

1a2c.1 | 1a3b.1 | 1a3e.1 | 1a46.1 | 1a4w.1 | 1a5g.1 | 1a61.1 | 1abi.1 | 1abj.1 | 1ad8.1 | 1ae8.1 | 1afe.1 | 1aht.1 | 1ai8.1 | 1aix.1 | 1awf.1 | 1awh.1 | 1awh.2 | 1ay6.1 | 1b5g.1 | 1b7x.1 | 1ba8.1 | 1bb0.1 | 1bcu.1 | 1bmm.1 | 1bmn.1 | 1bth.1 | 1bth.2 | 1c1u.1 | 1c1v.1  more...