SMTL ID : 1g32.1

THROMBIN INHIBITOR COMPLEX

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-oligomer

Ligands

1 x R11: 4-{[1-METHYL-5-(2-METHYL-BENZOIMIDAZOL-1-YLMETHYL)-1H-BENZOIMIDAZOL-2-YLMETHYL]-AMINO}-BENZAMIDINE(Non-covalent)

R11.1: 18 residues within 4Å: Chain B: H.43, Y.47, W.50, E.94, N.95, L.96, I.179, D.199, A.200, C.201, S.205, V.225, S.226, W.227, G.228, G.230, C.231, G.238 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:N.95, B:L.96, B:I.179, B:V.225, B:W.227 Hydrogen bonds: B:D.199, B:D.199, B:A.200, B:S.205, B:G.228 pi-Stacking: B:H.43, B:W.227, B:W.227

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nar, H. et al., Structural basis for inhibition promiscuity of dual specific thrombin and factor Xa blood coagulation inhibitors. Structure (2001)

Release Date

2001-10-23

Peptides

PROTHROMBIN: A
PROTHROMBIN: B
HIRUDIN IIB: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

PROTHROMBIN

PROTHROMBIN

HIRUDIN IIB

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